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Schistosoma mansoni
cluster # 10881 cluster # 10881       Sequences # 24       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10881#0 length = 931 sequences # 13  
consensus_10881#1 length = 871 sequences # 11  

consensusID : consensus_10881#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 931
fasta sequence
                              [AACGGAGAAACCCAAGAAACTGCTCTCACGCTTGCGGCATGTGGTGGTTTTATAGAAGTTTGTGAAATGCTTTTAAATGCTGGTGCTGATATTGAAGTTGGTGGAGTCGGTTGTTCTACTCCTTTAATGGAAGCTGCTCAAGAGGGACATCTAGAACTTGTCCGGCGTTTGTTGGAGCGTGGAGCATTAGTGAATGCAGTGACCGCCACTGGAGACACGGCGCTTCATTATGCAGCTGAAAATGGGCATGTCAAAGTTTGCGAAAAGTTGCTCGACTGGGGAGCCGTTTTTGGAGCCATGACAGAAGGAGGACGAACTCCATTGATGAAGGCTGCAAGAACAGGGCATTTGGAAGTTGTCCAGTTATTTTTGGAGCGTGGAGTAGCGATTGACCAGCCTACTTCACAGAATGATGCCAATGCCTTGTCATTAGCTTGTAGTGGCGGGCATGCAAAGATGGTAGAGTTCCTTCTTCAACATGGTGCTGATCCTCAATATCAGTTAAGAGACGGTTCTACAATGT-TAATCGAAGCTGCTCGTTCTGGAAATCCAGCAGTTCTGAGACTCATTTTAGATTATCCTAAATGTCTCAGTCAGCCATCGTCCATGCTTCCAAATGCTTCTGTTCAGCTTGTTGCAAATACATTGAACCAACATCAAACCCAACACCAATTTTCTCATGACCAGCGTTCTGCTTACCAATCGCTCGTGAGTGGCGTACCTACAATCGGCAATGTTATCATGCCACCACCCCCGCCTCCTTTACCTATTTCTGTTTCCGGAATAGCCAACATGGATATGTGCCTTGACCCATCTCATCCACATTTGCACCCACAAGCTCATTCGCATTCCTGTCATTCACACCAACAACTTTCGTTTCAGGCCCCTTCCAGTCTTTCTACGTCAACTAACTCTGNTCAGCCCACAACTC]

[+] EMBL CD127856             [AACGGAGAAACCCAAGAAACTGCTCTCACGCTTGCGGCATGTGGTGGTTTTATAGAAGTTTGTGAAATGCTTTTAAATGCTGGTGCTGATATTGAAGTTGGTGGAGTCGGGTGTTCTACTCCTTTAATGGAAGCTGCTCAAGAGGGACATCTAGAACTTGTCCGGCGTTTGTTGGAGCGTGGAGCATTACTGAATGCAGTGACCGCCACTGGAGACACGGCGCTTCATTATGCAGCTGAAAATGGGCATGTCAAAGTTTGCGAAAAGTTGCTCGACTGGGGAACCGTTTTTGGAGCCATGGCAGAAGGAAGACCAACTCCATTGATGAAGGCTGCAAGAACAGGGCATTTGGAAGTTGTCCAATTATTTTTGGAGCGTGGAGTAGCGATTGACCATCCTACTTCACAGAATGATGCCAATGCCTTGTCATTAACTTGTAATGGCGGGCATGCAAAGATGGTAGAGTTCCTTCTTCAACATGGTGCTGATCCTCAATATCAATTAAGAGACGGCTCTACAATGTGTAATCGAAGCTGCTCGTTCTGGAAATCCAGCAGTTCTGAGACTCATTTTAGATTATCCTAAATGTCTCAGTCAGCCATCGTCCATGCTTCCAAATGCTTCTGTTCAGCTTGTTGCAAATACATTGAACCAACATCAAACCCAACACCAATTTTCTCATGACCAGCGTTCTGCTTA CAATCGCTCG                                                                                                                                                                                                                              ]
[-] EMBL CD127109             [                               TTGCGGCATGTGGTGG TNTATAGAAGTNTGTGAAATGCTTTTAAATGCTGGTGCTGATATTGAAGTTGGTGGAGTCGGTTGTTCTACTCCTNTAATGGAAGCTGCTCAAGAGGGACATCTAGAACTTGTCCGGCGTTTGTTGGAGCGTGGAGCATTAGTGAATGCAGTGACCGCCACTGGAGACACGGCGCTTCATTATGCAGCTGAAAATGGGCATGTCAAAGTTTGCGAAAAGTTGCTCGACTGGGGAGCCGTTTTTGGAGCCATGACAGAAGGAGGACGAACTCCATTGATGAAGGCTGCAAGAACAGGGCATTTGGAAGTTGTCCAGTTATTTTTGGAGCGTGGAGTAGCGATTGACCAGCCTACTTCACAGAATGATGCCAATGCCTTGTCATTAGCTTGTAGTGGCGGGCATGCAAAGATGGTAGAGTTCCTTCTTCAACATGGTGCTGATCCTCAATATCAGTTAAGAGACGGTTCTACAATGT TAATCGAAGCTGCTCGTTCTGGAAATCCAGCAGTTCTGAGACTCATTTTAGATTATCCTAAATGTCTCAGTCAGCCATCGTCCATGCTTCCAAATGCTTCTGTTCAGCTTGTTGCAAATACATTGAACCAACATCAAACCCAACACCAATTTTCTCATGACCAGCGTTCTGCTTACCAATCGCTCGT                                                                                                                                                                                                                             ]
[+] EMBL CD118449             [                                                           TTGTGAAATGCTTTTAAATGCTGGTGCTGATATTGAAGTTGGTGGAGTCGGTTGTTCTACTCCTTTAATGGAAGCTGCTCAAGAGGGACGTCTAGAACTTGTCCGGCGTTTGTTGGAGCGTGGAGCATTAGTGAATGCAGTGACCGCCACTGGAGACACGGCGCTTCATTATGCAGCTGAAAATGGGCATGTCAAAGTTTGCGAAAAGTTGCTCGACTGGGGAGCCGTTTTTGGAGCCATGACAGAAGGAGGACGAACTCCATTGATGAAGGCTGCAAGAACAGGGCATTTGGAAGTTGTCCAGTTATTTTTGGAGCGTGGAGTAGCGATTGACCAGCCTACTTCACAGAATGATGCCAATGCCTTGTCATTAGCTTGTAGTGGCGGGCATGCAAAGATGGTAGAGTTCCTTCTTCAACATGGTGCTGATCCTCAATATCAGTTAAGAGACGGTTCTACAATGT TAATCGAAGCTGCTCGTTCTGGAAATCCAGCAGTTCTGAGACTCATTTTAGATTATCCTAAATGTCTCAGTCAGCCATCGTCCATGCTTCCAAATGCTTCTGTTCAGCTTGTTGCAAATACATTGAACCAACATCAAACCCAACACCAATTTTCTCATGACCAGCGTTCTGCTTACC                                                                                                                                                                                                                                       ]
[-] EMBL CD068511             [                                                                                                                                                                                              TGAATGCAGTGACCGCCACTGGAGACACGGCGCTTCATTATGCAGCTGAAAATGGGCATGTCAAAGTTTGCGAAAAGTTGCTCGACTGGGGAGCCGTTTTTGGAGCCATGACAGAAGGAGGACGAACTCCATTGATGAAGGCTGCAAGAACAGGGCATTTGGAAGTTGTCCAGTTATTTTTGGAGCGTGGAGTAGCGATTGACCAGCCTACTTCACAGAATGATGCCAATGCCTTGTCATTAGCTTGTAGTGGCGGGCATGCAAAGATGGTAGAGTTCCTTCTTCAACATGGTGCTGATCCTCAATATCAGTTAAGAGACGGTTCTACAATGT TAATCGAAGCTGCTCGTTCTGGAAATCCAGCAGTTCTGAGACTCATTTTAGATTATCCTAAATGTCTCAGTCAGCCATCGTCCATGCTTCC AATGCTTCTGTTCAGCTTGT  C AATACATTGAACC                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD090950             [                                                                                                                                                                                                                                                   GGGCATGTCAAAGTTTGCGAAAAGTTGCTCGACTGGGGAGCCGTTTTTGGAGCCATGACAGAAGGAGGACGAACTCCATTGATGAAGGCTGCAAGAACAGGGCATTTGGAAGTTGTCCAGTTATTTTTGGAGCGTGGAGTAGCGATTGACCAGCCTACTTCACAGAATGATGCCAATGCCTTGTCATTAGCTTGTAGTGGCGGGCATGCAAAGATGGTAGAGTTCCTTCTTCAACATGGTGCTGATCCTCAATATCAGTTAAGAGACGGTTCTACAATGT TAATCGAAGCTGCTCGTTCTGGAAATCCAGCAGCTCTGAGACTCATTTTAGATTATCCTAAATGTCTCAGTCAGCCATCGTCCATGCTTCCAAATGCTTCTGTTCAGCTTGTTGCANATACATTGAACCAACATCAAACCCAACACCAATTTTCTCATGACCt                                                                                                                                                                                                                                                     ]
[-] EMBL CD063574             [                                                                                                                                                                                                                                                                   GCGAAAAGTTGCTCGACTGGGGAGCCGTTTTTGGAGCCATGACAGAAGGAGGACGAACTCCATTGATGAAGGCTGCAAGAACAGGGCATTTGGAAGTTGTCCAGTTATTTTTGGAGCGTGGAGTAGCGATTGACCAGCCTACTTCACAGAATGATGCCAATGCCTTGTCATTAGCTTGTAGTGGCGGGCATGCAAAGATGGTAGAGTTCCTTCTTCAACATGGTGCTGATCCTCAATATCAGTTAAGAGACGGTTCTACAATGT TAATCGAAGCTGCTCGTTCTGGAAATCCAGCAGTTCTGAGACTCATTTTAGATTATCCTAAATGTCTCAGTCAGCCATCGTCCATG                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD096035             [                                                                                                                                                                                                                                                                                                                              CCATTGATGAAGGCTGCAAGAACAGGGCATTTGGAAGTTGTCCAGTTATTTTTGGAGCGTGGAGTAGCGATTGACCAGCCTACTTCACAGAATGATGCCAATGCCTTGTCATTAGCTTGTAGTGGCGGGCATGCAAAGATGGTAGAGTTCCTTCTTCAACATGGTGCTGATCCTCAATATCAGTTAAGAGACGGTTCTACAATGT TAATCGAAGCTGCTCGTTCTGGAAATCCAGCAGTTCTGAGACTCATTTTAGATTATCCTAAATGTCTCAGTCAGCCATCGTCCATGCTTCCAAATGCTTCTGTTCAGCTTGTTGCAAATACATTGAACCAACATCAAACCCAACACCAATTTTCTCATGACCAGCGTTCTGCTTACCAATCGCTCGTGAGTGGCGTACCTACAATCGGCAATGTTATCATGCCACCACCCCCGCCTCCTTTACCTATTTCTGTTTCCGGAATAGCCAACATGGATATGTGCCTTGACCCATCTCATCCACATTTGCACCCACAAGCTCATTCGCATTCCTGTCATTCACACCAACAACTTTCGTTTCAGGCCCCTTCCAGTCTTTCTACGTCAACTAACTCTGNTCAGCCCACAACTC]
[+] EMBL CD195255             [                                                                                                                                                                                                                                                                                                                                                                                           GAGTAGCGATTGACCAGCCTACTTCACAGAATGATGCCAATGCCTTGTCATTAGCTTGTAGTGGCGGGCATGCAAAGATGGTAGAGTTCCTTCTTCAACATGGTGCTGATCCTCAATATCAGTTAAGAGACGGTTCTACAATGT TAATCGAAGCTGCTCGTTCTGGAAATCCAGCAGTTCTGAGACTCATTTTAGATTATCCTAAATGTCTCAGTCAGCCATCGTCCATGCTTCCAAATGCTTCTGTTCAGCTTGTTGCAAATACATTGAACCAACATCAAACCCAACACCAATTTTCTCATGACCAGCGTTCTGCTTACCAATCGCTCGTGAGTGGCGTACCTACAATCGGCAATGTTATCATGCCACCACCCNCGCCTCCTTTACCTATTTCTGTTTCCGGAATAGCCAACATGGATATGTGCCTTGACCCATC                                                                                                                    ]
[-] EMBL CD085423             [                                                                                                                                                                                                                                                                                                                                                                                                           GCCTACTTCACAGAATGATGCCAATGCCTTGTCATTAGCTTGTAGTGGCGGGCATGCAAAGATGGTAGAGTTCCTTCTTCAACATGGTGCTGATCCTCAATATCAGTTAAGAGACGGTTCTACAATGT TAATCGAAGCTGCTCGTTCTGGAAATCCAGCAGTTCTGAGACTCATTTTAGATTATCCTAAATGTCTCAGTCAGCCATCGTCCATGCTTCCAAATGCTTCTGTTCAGCTTGTTGCAAATACATTGAACCAACATCAAACCCAACACCAATTTTCTCATGACCAGCGTTCTGCTTACCAATCGCTCGTGA                                                                                                                                                                                                                           ]
[-] EMBL CD085411             [                                                                                                                                                                                                                                                                                                                                                                                                              tgCTTCGCAGAATGATNCCAATGCCTTGTCATTAGCTTGTAGTGNCGGGCATGCAAAGATGGTAGAGTTCCTTCTTCAACATGGTGCTGATCCTCAATATCAGTTAAGAGACGGTTCTACAATGT TAATCGAAGCTGCTCGTTCTGGAAATCCAGCAGTTCTGAGACTCATTTTAGATTATCCTAAATGTCTCAGTCAGCCATCGTCCATGCTTCCAAATGCTTCTGTTCAGCTTGTTGCAAATACATTGAACCAACATCAAACCCAACACCAATTTTCTCATGACCAGCGTTCTGCTTACCAATCGCTCGTGA                                                                                                                                                                                                                           ]
[-] EMBL CD096769             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CATGTCCAGCGTTCTGCTTACCAATCGCTCGTGAGTGGCGTACCTACAATTGGCAATGTTATCATGCCACCACCCCCGCCTCCTTTACCTATTTCTGTTTCCGGAATAGCCAACATGGATATGTGCCTTGACCCATCTCATCCACATTTGCACCCACAAGCTCATTCGCATTCCTGTCATTCACACCAACAACTTTCGTTTCAGGCC                                              ]
[-] EMBL CD089216             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTTCTGCTTACCAATCGCTCGTGAGTGGCGTACCTACAATCGGCAATGTTATCATGCCACCACCCCCGCCTCCTTTACCTATTTCTGTTTCCGGAATAGCCAACATGGATATGTGCCTTGACCCATCTCATCCACATTTGCACCCACAAGCTCATTCGCATTCCTGT                                                                            ]
[+] EMBL CD193768             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TATGTGCCTTGACCCATCTCATCCACATTTGCACCCACAAGCTCATTCGCATTCCTGTCATTCACACCAACAACTTTCGTTTCAGGCCCCTTCCAGTCTTTCTACGTCAACTAACTCT                ]


>consensus_10881#0 AACGGAGAAACCCAAGAAACTGCTCTCACGCTTGCGGCATGTGGTGGTTTTATAGAAGTT TGTGAAATGCTTTTAAATGCTGGTGCTGATATTGAAGTTGGTGGAGTCGGTTGTTCTACT CCTTTAATGGAAGCTGCTCAAGAGGGACATCTAGAACTTGTCCGGCGTTTGTTGGAGCGT GGAGCATTAGTGAATGCAGTGACCGCCACTGGAGACACGGCGCTTCATTATGCAGCTGAA AATGGGCATGTCAAAGTTTGCGAAAAGTTGCTCGACTGGGGAGCCGTTTTTGGAGCCATG ACAGAAGGAGGACGAACTCCATTGATGAAGGCTGCAAGAACAGGGCATTTGGAAGTTGTC CAGTTATTTTTGGAGCGTGGAGTAGCGATTGACCAGCCTACTTCACAGAATGATGCCAAT GCCTTGTCATTAGCTTGTAGTGGCGGGCATGCAAAGATGGTAGAGTTCCTTCTTCAACAT GGTGCTGATCCTCAATATCAGTTAAGAGACGGTTCTACAATGTTAATCGAAGCTGCTCGT TCTGGAAATCCAGCAGTTCTGAGACTCATTTTAGATTATCCTAAATGTCTCAGTCAGCCA TCGTCCATGCTTCCAAATGCTTCTGTTCAGCTTGTTGCAAATACATTGAACCAACATCAA ACCCAACACCAATTTTCTCATGACCAGCGTTCTGCTTACCAATCGCTCGTGAGTGGCGTA CCTACAATCGGCAATGTTATCATGCCACCACCCCCGCCTCCTTTACCTATTTCTGTTTCC GGAATAGCCAACATGGATATGTGCCTTGACCCATCTCATCCACATTTGCACCCACAAGCT CATTCGCATTCCTGTCATTCACACCAACAACTTTCGTTTCAGGCCCCTTCCAGTCTTTCT ACGTCAACTAACTCTGNTCAGCCCACAACTC



consensusID : consensus_10881#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 871
fasta sequence
                              [GAACACGCTATTGACAGAGCCGTATCTTTTGTACGATCCACTTGTGCCTCAATGTCTGCACCATAATCAAGCAGCAATGAGACGACGGAGCGCTGATTGGCACACACAGCAGTATGGAGCGGTGTATGTGATTT-TTT-GTCACGATGTTCTTTATCAGCACCACGTTCCAACAAAAGACGAACAAGATCAACAAACCCCCCACTACACGCCAAAGTTAGAGCCGTCTCCATGCTGGATTCAATACAAGCATTGACATCAATTAGTGATGGCACATTTAAGGGAGATATTGTATCTCCCATCATAGACAAGTTGTTAGAGGCAACTGCGGCCATGTCATTGGG-TGACAAACCATGATTCGGTATAGAAGCACCTCCAGATGATAGGATAGGCTGGGGTCCTACCGGCAGAACTCTACTTCCACTTACTGGTAACAATGTTGGGTGTGTGACATGTTGGTATCCTGCCACTGCTGAGGGATTGTAAGCGATCGTTCCCGCTTGATTTACCATTAAACTATCGATGGAAATAGCGGACGATTGTTGTGGGACATGAAGTAAATTGTTAGAACCGATTAGATTATCTCCGCAAGTTGATACATTCAGAGAATGATGATGATGGTGATGGTGATGATGCACATTGTTATGAACACCCATATGACTCAAATTTGCTCCCACAAGCTCATTCGCATTCCTGTCATTCACACCAACAACTTTCGTTTCAGGCCCCTTCCAGTCTTTCTACGACAACTAACTCTGTTCAGCCCACAACTCATATAAATGCGGCACTGGCCAACGCATATGCTGTTGGATGGGCAGCCGGAGCAGCTGCTTTGGTTCACCAACAGCAGCAGCACACAATANACTCAGCTATT]

[+] EMBL CD149940             [GAACACGCTATTGACAGAGCCGTATCTTTTGTACGATCCACTTGTGCCTCAATGTCTGCACCATAATCAAGCAGCAATGAGACGACGGAGCGCTGATTGGCACACACAGCAGTATGGAGCGGTGTATGTGATTT TTT GTCACGATGTTCTTTATCAGCACCACGTTCCAACAAAAGACGAACAAGATCAACAAACCCCCCACTACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD149930             [GAACACGCTATTGACAGAGCCGTATCTTTTGTACGATCCACTTGTGCCTCAATGTCTGCACCATAATCAAGCAGCAATGAGACGACGGAGCGCTGATTGGCACACACAGCAGTATGGAGCGGTGTATGTGATTT TTT GTCACGATGTTCTTTATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD165275             [                                     CCACTTGTGCCTCAATGTCTGCACCATAATCAAGCAGCAATGAGACGACGGAGCGCTGATTGGCACACACAGCAGTATGGAGCGGTGTATGTGATTT TTT GTCACGATGTTCTTTATCAGCACCACGTTCCAACAAAAGACGAACAAGATCAACAAACCCCCCACTACACGCCAAAGTTAGAGCCGTCTCCATGCTGGATTCAATACAAGCATTGACATCAATTAGTGATGGCACATTTAAGGGAGATATTGTATCTCCCATCATAGACAAGTTGTTAGAGGCAACTGCGGCCATGTCATTGGG TGACAAACCATGATTCGGTATAGAAGCACCTCCAGATGATAGGATAGGCTGGGGTCCTACCGGCAGAACTCTACTTCCACTTACTGGTAACAATGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD193354             [                                                    TGTCTGCACCATAATCAAGCAGCAATGAGACGACGGAGCGCTGATTGGCACACACAGCAGTATGGAGCGGTGTATGTGATTT TTT GTCACGATGTTCTTTATCAGCACCACGTTCCAACAAAAGACGAACAAGATCAACAAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD112665             [                                                                                                                     gaCGGTGTATGTGATTTGTTTGGTCACGATGTTCTTTATCAGCACCACGTTCCAACAAAAGACGAACAAGATCAACAAACCCCCCACTACACGCCAAAGTTAGAGCCGTCTCCATGCTGGATTCAATACAAGCATTGACATCAATTAGTGATGGCACATTTAAGGGAGATATTGTATCTCCCATCATAGACAAGTTGTTAGAGGCAACTGCGGACATGTCATTGGGTTGACAAACCATGATTCGGTATAGAAGCACCTCCAGATGATAGGATAGGCCGGGGTCCTACCGGCAGAACTCTACTTCCACTTACCGGTAACAATGTTGGGTGTGTGACATGTTGGTATCCTGCCACTGCTGAGGGATTGTCAGCGATCGTTCCCGCTTGATTTACCATTAAACT                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD195558             [                                                                                                                                                                          AACAAAAGACGAACAAGATCAACAAACCCCCCACTACACGCCAAAGTTAGAGCCGTCTCCATGCTGGATTCAATACAAGCATTGACATCAATTAGTGATGGCACATTTAAGGGAGATATTGTATCTCCCATCATAGACAAGTTGTTAGAGGCAACTGCGGCCATGTCATTGGG TGACAAACCATGATTCGGTATAGAAGCACCTCCAGATGATAGGATAGGCTGGGGTCCTACCGGCAGAACTCTACTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD123190             [                                                                                                                                                                                                                     AAGTTAGAGCCGTCTCCATGCTGGATTCAATACAAGCATTGACATCAATTAGTGATGGCACATTTAAGGGAGATATTGTATCTCCCATCATAGACAAGTTGTTAGAGGCAACTGCGGCCATGTCATTGGG TGACAAACCATGATTCGGTATAGAAGCACCTCCAGATGATAGGATAGGCTGGGGTCCTACCGGCAGAACTCTACTTCCACTTACTGGTAACAATGTTGGGTGTGTGACATGTTGGTATCCTGCCACTGCTGAGGGATTGTA                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD123283             [                                                                                                                                                                                                                     AAGTTAGAGCCGTCTCCATGCTGGATTCAATACAAGCATTGACTTCAATTAGTGATGGCACATTTAAGGGAGATATTGTATCTCCCATCATAGACAAGTTGTTAGAGGCAACTGCGGCCATGTCATTGGG TGACAAACCATGATTCGGTATAGAAGCACCTCCAGATGATAGGATAGGCTGGGGTCCTACCGGCAGAACTCTACTTCCACTTACTGGTAACAATGTTGGGTGTGTGACATGTTGGTATCCTGCCACTGCTGAGGGATTGTA                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD112664             [                                                                                                                                                                                                                                           GGATTCAATACAAGCATGAACATCAATTAGTGATGGCACATTTAAGGGAGATATTGTATCTCCCATCATAGACAAGTTGTTAGAGGCAACTGCGGCCATGTCATTGGG TGACAAACCATGATTCGGTATAGAAGCACCTCCAGATGATAGGATAGGCTGGGGTCCTACCGGCAGAACTCTACTTCCACTTACTGGTAACAATGTTGGGTGTGTGACATGTTGGTATCCTGCCACTGCTGAGGGATTGTAAGCGATCGTTCCCGCTTGATTTACCATTAAACTATCGATGGAAATAGCGGACGATTGTTGAGGGACATGAAGTAAATTGTTAGAACCGATTAGATTATCTCCGCAAGTTGATACATTCAGAGAATGATGATGATGGTGATGGTGATGATGCACATTGTTACGAACACCCATATGACTCAAATTT                                                                                                                                                                                                             ]
[-] EMBL CD184600             [                                                                                                                                                                                                                                                                                                     TCTCCCATCATAGACAAGTTGTTAGAGGCAACTGCGGCCATGTCATTGGG TGACAAACCATGATTCGGTATAGAAGCACCTCCAGATGATAGGATAGGCTGGGGTCCTACCGGCAGAACTCTACTTCCACTTACTGGTAACAATGTTGGGTGTGTGACATGTTGGTATCCTGCCACTGCTGAGGGATTGTAAGCGATCGTTCCCGCTTGATTTACCATTAAACTATCGATGGAAATAGCGGACGATTGTTGTGGGACATGAAGTAAATTGTTAGAACCGATTAGATTATCTCCGCAAGTTGATACATTCAGAGAATGATGATGATGGTGATGGTGATGATGCACATTGTTATGAACACCCATATGACTCAAATTTGCT                                                                                                                                                                                                          ]
[+] EMBL CD114400             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGCTGAGGGATTGTAAGCGATCGTTCCCGCTTGATTTACCATTAAACTATCGATGGAAATAGCGGACGATTGTTGTGGGACATGAAGTAAATTGTTAGAACCGATTAGATTATCTCCGCAAGTTGATACATTCAGAGAATGATGATGATGGTGATGGTGATGATGCACATTGTTATGAACACCCATCTCATCCACATTTGCACCCACAAGCTCATTCGCATTCCTGTCATTCACACCAACAACTTTCGTTTCAGGCCCCTTCCAGTCTTTCTACGACAACTAACTCTGTTCAGCCCACAACTCATATAAATGCGGCACTGGCCAACGCATATGCTGTTGGATGGGCAGCCGGAGCAGCTGCTTTGGTTCACCAACAGCAGCAGCACACAATANACTCAGCTATT]


>consensus_10881#1 GAACACGCTATTGACAGAGCCGTATCTTTTGTACGATCCACTTGTGCCTCAATGTCTGCA CCATAATCAAGCAGCAATGAGACGACGGAGCGCTGATTGGCACACACAGCAGTATGGAGC GGTGTATGTGATTTTTTGTCACGATGTTCTTTATCAGCACCACGTTCCAACAAAAGACGA ACAAGATCAACAAACCCCCCACTACACGCCAAAGTTAGAGCCGTCTCCATGCTGGATTCA ATACAAGCATTGACATCAATTAGTGATGGCACATTTAAGGGAGATATTGTATCTCCCATC ATAGACAAGTTGTTAGAGGCAACTGCGGCCATGTCATTGGGTGACAAACCATGATTCGGT ATAGAAGCACCTCCAGATGATAGGATAGGCTGGGGTCCTACCGGCAGAACTCTACTTCCA CTTACTGGTAACAATGTTGGGTGTGTGACATGTTGGTATCCTGCCACTGCTGAGGGATTG TAAGCGATCGTTCCCGCTTGATTTACCATTAAACTATCGATGGAAATAGCGGACGATTGT TGTGGGACATGAAGTAAATTGTTAGAACCGATTAGATTATCTCCGCAAGTTGATACATTC AGAGAATGATGATGATGGTGATGGTGATGATGCACATTGTTATGAACACCCATATGACTC AAATTTGCTCCCACAAGCTCATTCGCATTCCTGTCATTCACACCAACAACTTTCGTTTCA GGCCCCTTCCAGTCTTTCTACGACAACTAACTCTGTTCAGCCCACAACTCATATAAATGC GGCACTGGCCAACGCATATGCTGTTGGATGGGCAGCCGGAGCAGCTGCTTTGGTTCACCA ACAGCAGCAGCACACAATANACTCAGCTATT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10881#0      AACGGAGAAACCCAAGAAACTGCTCTCACGCTTGCGGCATGTGGTGGTTTTATAGAAGTT 60
consensus_10881#1      ------------------------------------------------------------
                                                                                   

consensus_10881#0      TGTGAAATGCTTTTAAATGCTGGTGCTGATATTGAAGTTGGTGGAGTCGGTTGTTCTACT 120
consensus_10881#1      -----------------------------------------------------GAACACG 7
                                                                                ** 

consensus_10881#0      CCTTTAATGGAAGCTGCTCAAGAGGGACATCTAGAACTTGTCCGGCGTTTGTTGGAGCGT 180
consensus_10881#1      CTATTGACAGAGCCGTATCTTTTGTACGATCCACTTGTGCCTCAATGTCTGCACCATAAT 67
                       *  ** *  **  *   **    *    *** *    *    *   ** **    *   *

consensus_10881#0      GGAGCATTAGTGAATGCAGTGACCGCCACTGGAGACACGGCGCTTCATTATGCAGCTGAA 240
consensus_10881#1      CAAGCAGCAATGAGACGACGGAGCGCTGATTGGCACA---CACAGCAGTATGGAGCGGT- 123
                         ****  * ***    *  ** ***   * *  ***   * *  ** **** *** *  

consensus_10881#0      AATGGGCATGTCAAAGTTTGCGAAAAGTTGCTCGACTGGGGAGCCGTTTTTGGAGCCATG 300
consensus_10881#1      -----GTATGTGATTTTTTGTCACGATGTTCTTTATCAGCACCACGTTCCAACAAAAGAC 178
                            * **** *   ****  *  *  * **  *   *     ****     *      

consensus_10881#0      ACAGAAGGAGGACGAACTCCATTGATGAAGGCTGCAAGAACAGGGCATTTGGAAGTTGTC 360
consensus_10881#1      GAACAAGATCAACAAACCCC-CCACTACACGCCA-AAGTTAGAGCCGTCTCCATGCTG-- 234
                         * ***    ** *** **     *  * **   ***     * * * *  * * **  

consensus_10881#0      CAGTTATTTTTGGAGCGTGGAGTAGCGATTGACCAGCCTACTTCACAGAATGATGCCA-A 419
consensus_10881#1      --GATTCAATACAAGCATTGA-CATCAATTAGTGATGGCACATTTAAGGGAGATATTGTA 291
                         * *    *   *** * **  * * ***    *    ** *   **   ***     *

consensus_10881#0      TGCCTTGTCATTAGCTTGTAGTGGCGGGCATGCAAAGATGGTAGAGTTCCTTCTTCAACA 479
consensus_10881#1      TCTCCCATCATAGACAAGTTGTTAGAGGCA---------ACTGCGGCCATGTCATTG--- 339
                       *  *   ****   *  ** **    ****           *   *     ** *     

consensus_10881#0      TGGTGCTGATCCTCAATATCAGTTAAGAGACGGTTCTACAATGTTAATCGAAGCTGCTCG 539
consensus_10881#1      -GGTGACAAACCATGAT-TCGGTATAGAAGCACCTCCA-GATGATAGGATAGGCTGGG-G 395
                        ****   * **   ** ** **  ***  *   ** *  *** **    * ****   *

consensus_10881#0      TTCTGGAAATCCAGCAGTTCTGAGACTCATTTTAGATTATCCTAAATGTCTCAGTCAGCC 599
consensus_10881#1      TCCTACCGGCAGAACTCTACTTCCACTTACTGGTAACAATGTTGGGTGTGTGA------- 448
                       * **        * *  * **   *** * *    *  **  *   *** * *       

consensus_10881#0      ATCGTCCATGCTTCCAAATGCTTCTGTTCAGCTTGTTGCAAATACATTGAACCAACATCA 659
consensus_10881#1      --CATGTTGGTATCC---TGCCACTGCTGAGGG-ATTGTAAGCG-ATCGTTCCCGCTT-- 499
                         * *    *  ***   ***  *** * **    *** **    ** *  **  * *  

consensus_10881#0      AACCCAACACCAATTTTCTCATG--ACCAGCGTTCTGCTTACCAATCGCTCGTGAGTGGC 717
consensus_10881#1      GATTTACCATTAAACTATCGATGGAAATAGCGGAC-GATTGTTG-TGGGACATGAAGTAA 557
                        *   * **  **  *    ***  *  ****  * * **     * *  * ***     

consensus_10881#0      GTACCTACAATCGGCAATGTTATCATGCCACCACCCCCGCCTCCTTTACCTATTTCTGTT 777
consensus_10881#1      ATTGTTAGAACCGATTAGATTATCT--CCGCAAGT--TGATACATTCAGAGAATGATGAT 613
                        *   ** ** **   *  *****   ** * *     *   * ** *   * *  ** *

consensus_10881#0      TCCGG-AATAGCCAACATGGATATGTGCCTTGA---CCCATCTCATCCACATTTGCACCC 833
consensus_10881#1      GATGGTGATGGTGATGATGCACAT-TGTTATGAACACCCATATGACTCAAATTTGCTCCC 672
                          **  ** *  *  *** * ** **   ***   ***** * *  ** ****** ***

consensus_10881#0      ACAAGCTCATTCGCATTCCTGTCATTCACACCAACAACTTTCGTTTCAGGCCCCTTCCAG 893
consensus_10881#1      ACAAGCTCATTCGCATTCCTGTCATTCACACCAACAACTTTCGTTTCAGGCCCCTTCCAG 732
                       ************************************************************

consensus_10881#0      TCTTTCTACGTCAACTAACTCTGNTCAGCCCACAACTC---------------------- 931
consensus_10881#1      TCTTTCTACGACAACTAACTCTGTTCAGCCCACAACTCATATAAATGCGGCACTGGCCAA 792
                       ********** ************ **************                      

consensus_10881#0      ------------------------------------------------------------
consensus_10881#1      CGCATATGCTGTTGGATGGGCAGCCGGAGCAGCTGCTTTGGTTCACCAACAGCAGCAGCA 852
                                                                                   

consensus_10881#0      -------------------
consensus_10881#1      CACAATANACTCAGCTATT 871
                                          




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)