cluster # 10899

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 10899 cluster # 10899 Sequences # 24 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10899#0 length = 857 sequences # 22

consensus_10899#1 length = 436 sequences # 1
consensus_10899#2 length = 397 sequences # 1

consensusID : consensus_10899#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 22
consensus length = 857
fasta sequence

                              [CCTCGAGGCCAAAATTCGGCACGA-GCAACATGGCTAATCAGAATACTAATGAATATCTTGAGCATATAAAGACGAAACTGTTTGAAAATCTACGAATGATACCTCACTGTCCTAGTGTTCAAATGCAAGATATTCCGGATGACATTGTTGATTTTGACGAAAATGATGCTGTTGCAAAAGATTTAGCCGACCCTGACAAAAG-AATTTC-AATTATGGCTGCTGATAAAGCCATCATGCCCAATAACGAGTTTTTCGACGATCCAGAAGAAGGTTCTGGGCTTGGAGGCACCACTCTTCGATCAGGCAAATCAGCTTCACGAGATGTTCAAAATCACCGAGACCAACCAAAACGCGCACGCACAGATGAAGATGCCAGTTCATCCACCACGAAACCAAACAGTAAAGAAGGAAGTGGG-TCTAAAAAGACAGATTCTACTGGTGACAAGCGTTCGGAGTCCAAAAACGATTTTGTAGAAAAAATGGAAGTTGATTTATCCAAAAAAGCCAACGGTCTAATAGAACCGGAGCGAGCTGCTAATTAACTGGGTTTCTGTCACACTG-TTTTTTTTCTTAATAATTTTTGTAAATGTCTTTGTCCGTCTCCTTTTATACAAATAATCCCCCGTGATTCACATGAATGTCATGTTTATGATATCCTGTGTTCATTGTCTGTTTGACATCTAACTATATGTATTGGCTCTTCTTATTTTCCGAAATTGCCTGTCATATTGTACGCATTTATTCGACTTACTGTTAAAGTGTACAGCTCTTGCAAACGTATACCATTTGCTATTTTAATGTCCAGTGAATTCAATTTTGCTTATATGTTTTATGAAAAAGGTATGTAATAAAAAGCT]

[+] EMBL CD079534             [CCTCGAGGCCAAAATTCGGCACGAGGCAACATGGCTAATCAGAATACTAATGAATATCTTGAGCATATAAAGACGAAACTGTTTGAAAATCTACGAATGATACCTCACTGTCCTAGTGTTCAAATGCAAGATATTCCGGATGACATTGTTGATTTTGACGAAAATGATGCTGTTGCAAAAGATTTAGCCGACCCTGACAAAAG AATTTC AATTATGGCTGCTGATAAAGCCATCATGCCCAATAACGAGTTTTTCGACGATCCAGAAGAAGGTTCTGGGCTTGGAGGCACCACTCTTCGATCAGGCAAATCAGCTTCACGAGATGTTCAAAATCACCGAGACCAACCAAAACGCGCACGCACAGATGAAGATGCCAGTTCATCCACCACGAAACCAAACAGTAAAGAAGGAAGTGGG TCTAAAAAGACAGATTCTACTGGTGACAAGCGTTCGGAGTCCAAAAACGATTTTGTAGAAAAAATGGAAGTTGATTTATCCAAAAAAGCCAACGGTCTAATAGAACCGGAGCGAGCTGCTAATTAACTGGGTTTCTGTCACACTG TTTTTTTTCTTAATAATTTTTGTAAATGTCTTTGTCCGTCTCCTTTTATACAAATAATCCCCCGTGATTCACATGAATGTCATGTTTATGATATCCTGTGTTCATTGTCTGTTTGACATCTAACTATATGTATTGGCTCTTCTTATTTTCCGAAATTGCCTG                                                                                                                                      ]
[+] EMBL CD171104             [                     CGA GCAACATGGCTAATCAGAATACTAATGAATATCTTGAGCATATAAAGACGAAACTGTTTGAAAATCTACGAATGATACCTCACTGTCCTAGTGTTCAAATGCAAGATATTCCGGATGACATTGTTGATTTTGACGAAAATGATGCTGTTGCAAAAGATTTAGCCGACCCTGACAAAAG AATTTC AATTATGGCTGCTGATAAAGCCATCATGCCCAACAACGAGTTTTTCGACGATCCAGAAGAAGGTTCTGGGCTTGGAGGCACCACTCTTCGATCAGGCAAATCAGCTTCACGAGATGTTCAAAATCACCGAGACCAACCAAAACGCGCACGCACAGATGAAGATGCCAGTTCATCCACCACGAAACCAAACAGTAAAGAAGGAAGTGGG TCTAAAAAGACAGATTCTACTGGTGACAAGCGTTCGGAGTCCAAAAGCGATTTTGTAG                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD171115             [                     CGA GCAACATGGCTAATCAGAATACTAATGAATATCTTGAGCATATAAAGACGAAACTGTTTGAAAATCTACGAATGATACCTCACTGTCCTAGTGTTCAAATGCAAGATATTCCGGATGACATTGTTGATTTTGACGAAAATGATGCTGTTGCAAAAGATTTAGCCGACCCTGACAAAAG AATTTC AATTATGGCTGCTGATAAAGCCATCATGCCCAATAACGAGTTTTTCGACGATCCAGAAGAAGGTTCTGGGCTTGGAGGCACCACTCTTCGATCAGGCAAATCAGCTTCACGAGATGTTCAAAATCACCGAGACCAACCAAAACGCGCACGCACAGATGAAGATGCCAGTTCATCCACCACGAAACCAAACAGTAAAGAAGGAAGTGGG TCTAAAAAGACAGATTCTACTGGTGACAAGCGTTCGGAGTCCAAAAACGATTTT                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD171118             [                     CGA GCAACATGGCTAATCAGAATACTAATGAATATCTTGAGCATATAAAGACGAAACTGTTTGAAAATCTACGAATGATACCTCACTGTCCTAGTGTTCAAATGCAAGATATTCCGGATGACATTGTTGATTTTGACGAAAATGATGCTGTTGCAAAAGATTTAGCCGACCCTGACAAAAG AATTTC AATTATGGCTGCTGATAAAGCCATCATGCCCAATAACGAGTTTTTCGACGATCCAGAAGAAGGTTCTGGGCTTGGAGGCACCACTCTTCGATCAGGCAAATCAGCTTCACGAGATGTTCAAAATCACCGAGACCAACCAAAACGCGCACGCACAGATGAAGATGCCAGTTCATCCACCACGAAACCAAACAGTAAAGAAGGAAGTGGG TCTAAAAAGACAGATTCTACTGGTGACAAGCGTTCGGAGTCCAAAAACGATTT                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD171107             [                     CGA GCAACATGGCTAATCAGAATACTAATGAATATCTTGAGCATATAAAGACGAAACTGTTTGAAAATCTACGAATGATACCTCACTGTCCTAGTGTTCAAATGCAAGATATTCCGGATGACATTGTTGATTTTGACGAAAATGATGCTGTTGCAAAAGATTTAGCCGACCCTGACAAAAG AATTTC AATTATGGCTGCTGATAAAGCCATCATGCCCAATAACGAGTTTTTCGACGATCCAGAAGAAGGTTCTGGGCTTGGAGGCACCACTCTTCGATCAGGCAAATCAGCTCCACGAGATGTTCAAAATCACCGAGACCAACCAAAACGCGCACGCACAGATGAAGATGCCAGTTCATCCACCACGAAAACAAACAGTAGAGAAGGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD171071             [                     CGA GCAACATGGCTAATCAGAATACTAATGAATATCTTGAGCATATAAAGACGAAACTGTTTGAAAATCTACGAATGATACCTCACTGTCCTAGTGTTCAAATGCAAGATATTCCGGATGACATTGTTGATTTTGACGAAAATGATGCTGTTGCAAAAGATTTAGCCGACCCTGACAAAAG AATTTC AATTATGGCTGCTGATAAAGCCATCATGCCCAATAACGAGTTTTTCGACGATCCAGAAGAAGGTTCTGGGCTTGGAGGCACCACTCTTCGATCAGGCAAATCAGCTTCACGAGATGTTCAAAATCACCGAGACCAAACAAAACGCGCACGCACAGATGAAGATGCCAGTTCATCCACCACGAAAACAAACAGTAAAGAAGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD171083             [                     CGA GCAACATGGCTAATCAGAATACTAATGAATATCTTGAGCATATAAAGACGAAACTGTTTGAAAATCTACGAATGATACCTCACTGTCCTAGTGTTCAAATGCAAGATATTCCGGATGACATTGTTGATTTTGACGAAAATGATGCTGTTGCAAAAGATCTAGCCGACCCTGACAAAAG AATTTC AATTATGGCTGCTGATAAAGCCATCATGCCCAATAACGAGTTTTTCGACGATCCAGAAGAAGGTTCTGGGCTTGGAGGCACCACTCTTCGATCAGGCGAATCAGCTTCACGAGATGTTCAAAATCACCGAGACCAACCAAAACGCGCACGCACAGATTAAGATGCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD171112             [                     CGA GCAACATGGCTAATCAGAATACTAATGAATATCTTGAGCATATAAAGACGAAACTGTTTGAAAATCTACGAATGATACCTCACTGTCCTAGTGTTCAAATGCAAGATATTCCGGATGACATTGTTGATTTTGACGAAAATGATGCTGTTGCAAAAGATTTAGCCGACCCTGACAAAAG AATTTC AATTATGGCTGCTGATAAAGCCGTCATGCCCAATAACGAGTTTTTCGACGATCCAGAAGAAGGTTCTGGGCTTGGAGGCACCACTCTTCGATCAGGCAAATCAGCTTCACGAGATGTTCAAAGTCACCGAGACCAACCAAAACGCGCACGCACAGATGAAGATGCCAGTTCATCCACCACGAAACCAAACAGTAAAGAAGGAAGTGGG TCTAAAAAGACAGATTCTACTGGTGACAAGCGT                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD171100             [                     CGA GCAACATGGCTAATCAGAATACTAATGAATATCTTGAGCATATAAAGACGAAACTGTTTGAAAATCTACGAATGATACCTCACTGTCCTAGTGTTCAAATGCAAGATATTCCGGATGACATTGTTGATTTTGACGAAAATGATGCTGTTGCAAAAGATTTAGCCGACCCTGACAAAAGAAATTTCAAATTATGGCTGCTGATAAAGCCATCATGCCCAATAACGAGTTTTTCGACGATCCAGAAGAAGGTTCTGGGCTTGGAGGCACCACTCTTCGATCAGGCAAATCAGCTTCACGAGATGTTCAAAATCACCGAGAACAAGCAAAACGCGCACGCACAGATGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD171088             [                     CGA GCAACATGGCTAATCAGAATACTAATGAATATCTTGAGCATATAAAGACGAAACTGTTTGAAAATCTACGAATGATACCTCACTGTCCTAGTGTTCAAATGCAAGATATTCCGGATGACATTGTTGATTTTGACGAAAATGATGCTGTTGCAAAAGATTTAGCCGACCCTGACAAAAG AATTTC AATTATGGCTGCTGATAAAGCCATCACGCCCAATAACGAGTTTTTCGACGATCCAGAAGAAGGTTCTGGGCTTGGAGGCACCACTCTTCGATCAGGCAAATCAGCTTCACGAGATGTTCAAAATCACCGAGACCAACCAAAACGCGCACGCACAGATGAAGATGCCAGTTCATCCACCACGAAACCAAACAGTACAGAAGGAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD171114             [                                                                            AACTGTTTGAAGATCTACGAATGATACCTCACTGTCCTAGTGTTCAAATGCAAGATATTCCGGATGACATTGTTGATTTTGACGAAAATGATGCTGTTGCAAAAGATTTAGCCGACCCTGACAAAAG AATTTC AATTATGGCTGCTGATAAAGCCATCATGCCCAATAACGAGTTTTTCGACGATCCAGAAGAAGGTTCTGGGCTTGGAGGCACCACTCTTCGATCAGGCAAATCAGCTTCACGAGATGTTCAAAATCACCGAGACCAACCAAAACGCGCACGCACAGATGAAGATGCCAGTTCATCCACCACGAAACCAAACAGTAAAGAAGGAAGTGGG TCTAAAAAGACAGATTCTACTGGTGACAAGCGTTCGGAGTCCAAAAACGATTTTGTAGAAAAAATGGAAGTTGATTTATCCAAAAAAGCCAACGGTCTAATAGAA                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD171085             [                                                                              CTGTTTGAAAATCTACGAATGATACCTCACTGTCCTAGTGTTCAAATGCAAGATATTCCGGATGACATTGTTGATTTTGACGAAAATGATGCTGTTGCAAAAGATTTAGCCGACCCTGACAAAAG AATTTC AATTATGGCTGCTGATAAAGCCATCATGCCCAATAACGAGTTTTTCGACGATCCAGAAGAAGGTTCTGGGCTTGGAGGCACCACTCTTCGATCAGGCAAATCAGCTTCACGAGATGTTCAAAATCACCGAGACCAACCAAAACGCGCACGCACAGATGAAGATGCCAGTTCATCCACCACGAAACCAAACAGTAAAGAAGGAAGTGGG TCTAAAAAGACAGATTCTACTGGTGACAAGCGTTCGGAGTCCAAAAACGATTTTGTAGAAAAAATGGAAGTTGATTTATCCAAAAAAGCCAACGGTCTAATAGAA                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD171076             [                                                                                       AATCTACGAATGATACCTCACTGTCCTAGTGTTCAAATGCAAGATATTCCGGATGACATTGTTGATTTTGACGAAAATGATGCTGTTGCAAAAGATTTAGCCGACCCTGACAAAAG AATTTC AATTATGGCTGCTGATAAAGCCATCATGCCCAATAACGAGTTTTTCGACGATCCAGAAGAAGGTTCTGGGCTTGGAGGCACCACTCTTCGATCAGGCAAATCAGCTTCACGAGATGTTCAAAATCACCGAGACCAACCAAAACGCGCACGCACAGATGAAGATGCCAGTTCATCCACCACGAAACCAAACAGTAAAGAAGGAAGTGGG TCTAAAAAGACAGATTCTACTGGTGACAGGCGTTCGGAGTCCAAAAACGATTTTGTAGAAAAAATGGAAGTTGATTTATCCAAAAAAGCCAACGGTCTAATAGAA                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD171070             [                                                                                                                    TGTTCAAATGCAAGATATTCCGGATGACATTGTTGATTTTGACGAAAATGATGCTGTTGCAAAAGATTTAGCCGACCCTGACAAAAG AATTTC AATTATGGCTGCTGATAAAGCCATCATGCCCAATAACGAGTTTTTCGACGATCCAGAAGAAGGTTCTGGGCTTGGAGGCACCACTCTTCGATCAGGCAAATCAGCTTCACGAGATGTTCAAAATCACCGAGACCAACCAAAACGCGCACGCACAGATGAAGATGCCAGTTCATCCACCACGAAACCAAACAGTAAAGAAGGAAGTGGG TCTAAAAAGACAGATTCTACTGGTGACAAGCGTTCGGAGTCCAAAAACGATTTTGTAGAAAAAATGGAAGTTGATTTATCCAAAAAAGCCAACGGTCTAATAGAA                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD171091             [                                                                                                                                                            GACGAAAATGATGCTGTTGCAAAAGATTTAGCCGACCCTGACAAAAG AATTTC AATTATGGCTGCTGATAAAGCCATCATGCCCAATAACGAGTTTTTCGACGATCCAGAAGAAGGTTCTGGGCTTGGAGGCACCACTCTTCGATCAGGCAAATCAGCTTCACGAGATGTTCAAAATCACCGAGACCAACCAAAACGCGCACGCACAGATGAAGATGCCAGTTCATCCACCACGAAACCAAACAGTAAAGAAGGAAGTGGG TCTAAAAAGACAGATTCTACTGGTGACAAGCGTTCGGAGTCCAAAAACGATTTTGTAGAAAAAATGGAAGTTGATTTATCCAAAAAAGCCAACGGTCTAATAGAA                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD138751             [                                                                                                                                                                                                                TC AATTATGGCTGCTGATTAAGCCATCATGCCCAATAACGAGTTTTTCGACGATCCAGAAGAAGGTTCTGGGCTTGGAGGCACCACTCTTCGATCAGGCAAATCAGCTTCACGAGATGTTCAAAATCACCGAGACCAACCAAAACGCGCACGCACGGATGAAGATGCCAGTTCATCCACCACGAAACCAAACAGTAAAGAAGGAAGTGGG TCTAACAAGACAGATTCTACTGGTGACAAGCGTTCGGAGTCCAAAAACGATTTTGTAGAAAAAATGGAAGTTGATTTATCCAAAAAAGCCAACGGTCTAATAGAACCGGAGCGAGCTGCTAATTAACTGGGTTTCTGTCACACTG TTTTTTTTCTTAATAATTTTTGTAAAT                                                                                                                                                                                                                                                                             ]
[+] EMBL CD178068             [                                                                                                                                                                                                                                              GCCCAATAACGAGTTTTTCGACGATCCAGAAGAAGGTTCTGGGCTTGGAGGCACCACTCTTCGATCAGGCAAATCAGCTTCACGAGATGTTCAAAATCACCGAGACCAACCAAAACGCGCACGCACAGATGAAGATGCCAGTTCATCCACCACGAAACCAAACAGTAAAGAAGGAAGTGGG TCTAAAAAGACAGATTCTACTGGTGACAAGCGTTCGGAGTCCAAAAACGATTTTGTAGAAAAAATGGAAGTTGATTTATCCAAAAAAGCCAACGGTCTAATAGAACCGGAGCGAGCTGCTAATTAACTGGGTTTCTGTCACACTGTTTTTTTTTCTTAATAATTT                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD148903             [                                                                                                                                                                                                                                              GCCCAATAACGAGTTTTTCGACGATCCAGAAGAAGGTTCTGGGCTTGGAGGCACCACTCTTCGATCAGGCAAATCAGCTTCACGAGATGTTCAAAATCACCGAGACCAACCAAAACGCGCACGCACAGATGAAGATGCCAGTTCATCCACCACGAAACCAAACAGTAAAGAAGGAAGTGGG TCTAAAAAGACAGATTCTACTGGTGACAAGCGTTCGGAGTCCAAAAACGATTTTGTAGAAAAAATGGAAGTTGATTTATCCAAAAAAGCCAACGGTCTAA                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD073800             [                                                                                                                                                                                                                                                                                                                                              TCCCCGAGACCAACCAAAACGCGCACGCACAAATGAAAATGCCAGTTCATCCCCCCCGAAACCAACCAGTAAAGAAGGAAGTGGG TTTAAAAAGACAGATTTTACTGGTGACAAGCGTTCGGAGTCCAAAAACGATTTTGTAGAAAAAATGGAAGTTGATTTATCCAAAAAAGCCACCGGTTTAATAGAACCGGAGCGAGCTGCTAATTAACTGGGTTTC                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD182637             [                                                                                                                                                                                                                                                                                                                                                                                                                     AAGAAGGAAGTGGG TCTAAAAAGACAGATTCTACTGGTGACAAGCGTTCGGAGTCCAAAAACGATTTTGTAGAAAAAATGGAAGTTGATTTATCCAAAAAAGCCAACGGTCTAATAGAACCGGAGCGAGCTGCTAATTAACTGGGTTTCTGTCACACTG TTTTTTTTCTTAATAATTTTTGAAAATGTCTTTGTCCGTCTCCTTTTATACAAATAATCCCCCGTGATTCACATGAATGTCATGTTTATGATATCCTGTGTTCATTGTCTGTTTGACATCTAACTA                                                                                                                                                                          ]
[+] EMBL BG930937             [                                                                                                                                                                                                                                                                                                                                                                                                                  attgtGATGGACGGGGGATCTAAAAAGACAGATTCTACTGGTGACAAGCGTTCGGAGTCCAAAAACGATTTTGTAGAAAAAATGGAAGTTGATTTATCCAAGAAAGCCAACGGTCTAATAGAACCGGAGCGAGCTGCTAATTAACTGGGTTTCTGTCACACTG TTTTTTTTCTTAATAATTTTTGTAAATGTCTTTGTCCGTCTCCTTTTATACAAATga                                                                                                                                                                                                                                               ]
[-] EMBL CD073799             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTAAATGTCTTTGTCCGTCTCCTTTTATACAAATAATCCCCCGTGATTCACATGAATGTCATGTTTATGATATCCTGTGTTCATTGTCTGTTTGACATCTAACTATATGTATTGTCTTTTTTTATTTTCCGAAATTGCCTGTCATATTGTACGCATTTATTCGACTTACTGTTAAAGTGTACAGCTCTTGCAAACGTATACCATTTGCTATTTTAATGTCCAGTGAATTCAATTTTGCTTATATGTTTTATGAAAAAGGTATGTAATAAAAAGCT]




>consensus_10899#0
CCTCGAGGCCAAAATTCGGCACGAGCAACATGGCTAATCAGAATACTAATGAATATCTTG
AGCATATAAAGACGAAACTGTTTGAAAATCTACGAATGATACCTCACTGTCCTAGTGTTC
AAATGCAAGATATTCCGGATGACATTGTTGATTTTGACGAAAATGATGCTGTTGCAAAAG
ATTTAGCCGACCCTGACAAAAGAATTTCAATTATGGCTGCTGATAAAGCCATCATGCCCA
ATAACGAGTTTTTCGACGATCCAGAAGAAGGTTCTGGGCTTGGAGGCACCACTCTTCGAT
CAGGCAAATCAGCTTCACGAGATGTTCAAAATCACCGAGACCAACCAAAACGCGCACGCA
CAGATGAAGATGCCAGTTCATCCACCACGAAACCAAACAGTAAAGAAGGAAGTGGGTCTA
AAAAGACAGATTCTACTGGTGACAAGCGTTCGGAGTCCAAAAACGATTTTGTAGAAAAAA
TGGAAGTTGATTTATCCAAAAAAGCCAACGGTCTAATAGAACCGGAGCGAGCTGCTAATT
AACTGGGTTTCTGTCACACTGTTTTTTTTCTTAATAATTTTTGTAAATGTCTTTGTCCGT
CTCCTTTTATACAAATAATCCCCCGTGATTCACATGAATGTCATGTTTATGATATCCTGT
GTTCATTGTCTGTTTGACATCTAACTATATGTATTGGCTCTTCTTATTTTCCGAAATTGC
CTGTCATATTGTACGCATTTATTCGACTTACTGTTAAAGTGTACAGCTCTTGCAAACGTA
TACCATTTGCTATTTTAATGTCCAGTGAATTCAATTTTGCTTATATGTTTTATGAAAAAG
GTATGTAATAAAAAGCT

consensusID : consensus_10899#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 436
fasta sequence

                              [CATGAATTCAATAAACAAATGCAACGTTTCAATGTTGGCGAAGATTGTCCTGTCTTCGATGGACTTTTCGAATTTTGCCAGTTATCGGCTGGTGGTTCTATTGCTGCAGCCGTCAAACTGAATAAACAGCAAACTGACATCGCCATTAACTGGGGTGGTGGCCTCCATCATGCAAGGAAATCTGAGGCATCAGGATTCTGCTACATCAATGACATTGTAATAGGGATTTTAGAACTTCTGAAATATCACCAAAGAGTTCTTTACGTGGATATTGATATTCATCATGGTGATGGTGTTGAAGAAGCTTTCTATACTACTGATAGAGTGATGACCGTTAGTTTCCACAAGTACGGCGAGTATTTTCCCGGAACTGGTGATCTAAAAGATATTGGTGCAGGTCGCGGTAAATATTACGCTGTCAATTGTCCACTGAGAG]

[+] EMBL CD147439             [CATGAATTCAATAAACAAATGCAACGTTTCAATGTTGGCGAAGATTGTCCTGTCTTCGATGGACTTTTCGAATTTTGCCAGTTATCGGCTGGTGGTTCTATTGCTGCAGCCGTCAAACTGAATAAACAGCAAACTGACATCGCCATTAACTGGGGTGGTGGCCTCCATCATGCAAGGAAATCTGAGGCATCAGGATTCTGCTACATCAATGACATTGTAATAGGGATTTTAGAACTTCTGAAATATCACCAAAGAGTTCTTTACGTGGATATTGATATTCATCATGGTGATGGTGTTGAAGAAGCTTTCTATACTACTGATAGAGTGATGACCGTTAGTTTCCACAAGTACGGCGAGTATTTTCCCGGAACTGGTGATCTAAAAGATATTGGTGCAGGTCGCGGTAAATATTACGCTGTCAATTGTCCACTGAGAG]




>consensus_10899#1
CATGAATTCAATAAACAAATGCAACGTTTCAATGTTGGCGAAGATTGTCCTGTCTTCGAT
GGACTTTTCGAATTTTGCCAGTTATCGGCTGGTGGTTCTATTGCTGCAGCCGTCAAACTG
AATAAACAGCAAACTGACATCGCCATTAACTGGGGTGGTGGCCTCCATCATGCAAGGAAA
TCTGAGGCATCAGGATTCTGCTACATCAATGACATTGTAATAGGGATTTTAGAACTTCTG
AAATATCACCAAAGAGTTCTTTACGTGGATATTGATATTCATCATGGTGATGGTGTTGAA
GAAGCTTTCTATACTACTGATAGAGTGATGACCGTTAGTTTCCACAAGTACGGCGAGTAT
TTTCCCGGAACTGGTGATCTAAAAGATATTGGTGCAGGTCGCGGTAAATATTACGCTGTC
AATTGTCCACTGAGAG

consensusID : consensus_10899#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 397
fasta sequence

                              [CGCGCACGCACAGATGAAGATGCCAGTTCATCCACCACGAAACCAAACAGTAAAGAAATCTGAGGCATCAGGATTCTGCTACATCAATGACATTGTAATAGGGATTTTAGAACTTCTGAAATATCACCAAAGAGTTCTTTATGTGGATATTGATATTCATCATGGTGATGGTGTTGAAGAAGCTTTCTATACTACTGATAGAGTGATGACCGTTAGTTTCCACAAGTACGGCGAGTATTTTCCCGGAACTGGTGATCTAAAAGATATTGGTGCAGGTCGCGGTAAATATTACGCTGTCAATTGTCCACTGAGAGACGGGATGGATGATGATTGCTACGAGCCTATTTTTAAGCCTGTCGTGACGAAAGTTATGGAAACTTTTCGACCCGGGGCCGTT]

[+] EMBL CD134394             [CGCGCACGCACAGATGAAGATGCCAGTTCATCCACCACGAAACCAAACAGTAAAGAAATCTGAGGCATCAGGATTCTGCTACATCAATGACATTGTAATAGGGATTTTAGAACTTCTGAAATATCACCAAAGAGTTCTTTATGTGGATATTGATATTCATCATGGTGATGGTGTTGAAGAAGCTTTCTATACTACTGATAGAGTGATGACCGTTAGTTTCCACAAGTACGGCGAGTATTTTCCCGGAACTGGTGATCTAAAAGATATTGGTGCAGGTCGCGGTAAATATTACGCTGTCAATTGTCCACTGAGAGACGGGATGGATGATGATTGCTACGAGCCTATTTTTAAGCCTGTCGTGACGAAAGTTATGGAAACTTTTCGACCCGGGGCCGTT]




>consensus_10899#2
CGCGCACGCACAGATGAAGATGCCAGTTCATCCACCACGAAACCAAACAGTAAAGAAATC
TGAGGCATCAGGATTCTGCTACATCAATGACATTGTAATAGGGATTTTAGAACTTCTGAA
ATATCACCAAAGAGTTCTTTATGTGGATATTGATATTCATCATGGTGATGGTGTTGAAGA
AGCTTTCTATACTACTGATAGAGTGATGACCGTTAGTTTCCACAAGTACGGCGAGTATTT
TCCCGGAACTGGTGATCTAAAAGATATTGGTGCAGGTCGCGGTAAATATTACGCTGTCAA
TTGTCCACTGAGAGACGGGATGGATGATGATTGCTACGAGCCTATTTTTAAGCCTGTCGT
GACGAAAGTTATGGAAACTTTTCGACCCGGGGCCGTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10899#1      ------------------------------------------------------------
consensus_10899#2      ------------------------------------------------------------
consensus_10899#0      CCTCGAGGCCAAAATTCGGCACGAGCAACATGGCTAATCAGAATACTAATGAATATCTTG 60
                                                                                   

consensus_10899#1      ------------------------------------------------------------
consensus_10899#2      ------------------------------------------------------------
consensus_10899#0      AGCATATAAAGACGAAACTGTTTGAAAATCTACGAATGATACCTCACTGTCCTAGTGTTC 120
                                                                                   

consensus_10899#1      ------------------------------------------------------------
consensus_10899#2      ------------------------------------------------------------
consensus_10899#0      AAATGCAAGATATTCCGGATGACATTGTTGATTTTGACGAAAATGATGCTGTTGCAAAAG 180
                                                                                   

consensus_10899#1      ----------------------------------------------------CATGAATT 8
consensus_10899#2      ------------------------------------------------------------
consensus_10899#0      ATTTAGCCGACCCTGACAAAAGAATTTCAATTATGGCTGCTGATAAAGCCATCATGCCCA 240
                                                                                   

consensus_10899#1      CAATAAACAAATGCAACGTTTCAATGTTGGCGAAGATTGTCCTGTCTTCGATGGACTTTT 68
consensus_10899#2      ------------------------------------------------------------
consensus_10899#0      ATAACGAGTTTTTCGACGATCCAGAAGAAGGTTCTGGGCTTGGAGGCACCACTCTTCGAT 300
                                                                                   

consensus_10899#1      CGAATTTTGCCAGTTATCGGCTGGTGGTTCTATTGCTGCAGCCGTCAAACTGAATAAACA 128
consensus_10899#2      --------------------------------------------------CGCGCACGCA 10
consensus_10899#0      CAGGCAAATCAGCTTCACGAGATGTTCAAAATCACCGAGACCAACCAAAACGCGCACGCA 360
                                                                          *   *  **

consensus_10899#1      GCAAACTGACATCGCCATTAACTGGGGTGGTGGCCTCCATCATGCAAGGAA--ATCTGAG 186
consensus_10899#2      -CAGATGAAGATGCCAGTTCATCCA--CCACGAAACCAAACA-GTAAAGAA--ATCTGAG 64
consensus_10899#0      -CAGATGAAGATGCCAGTTCATCCA--CCACGAAACCAAACA-GTAAAGAAGGAAGTGGG 416
                        ** *   * **  *  ** *          *    * * ** * ** ***  *  ** *

consensus_10899#1      GCATCAGGATTCTGCTACATCAATGACATTGTAATAGGGATTTTAGAAC--TTCTGAAAT 244
consensus_10899#2      GCATCAGGATTCTGCTACATCAATGACATTGTAATAGGGATTTTAGAAC--TTCTGAAAT 122
consensus_10899#0      TCTAAAAAGACAGATTCTACTGGTGACAA-GCGTTCGGAGTCCAAAAACGATTTTGTAGA 475
                        *   *         *  *    *****  *   * **  *   * ***  ** ** *  

consensus_10899#1      ATCACCAAAGAGTTCTTTACGTGGATATTGATATTCATCATGGTGATGGTGTTGAAGAAG 304
consensus_10899#2      ATCACCAAAGAGTTCTTTATGTGGATATTGATATTCATCATGGTGATGGTGTTGAAGAAG 182
consensus_10899#0      AAAAATGGAAGTTGATTTATCCAAA-----AAAGCCAACGGTCTAATAGAACCGGAGCGA 530
                       *  *    *   *  ****     *     * *  ** *    * ** *    * **   

consensus_10899#1      CTTTCTATACTACTGATAGAGTGATG-ACCGTTAGTTTCC---ACAAGTACGGCGAGTAT 360
consensus_10899#2      CTTTCTATACTACTGATAGAGTGATG-ACCGTTAGTTTCC---ACAAGTACGGCGAGTAT 238
consensus_10899#0      GCTGCTAATTAACTGGGTTTCTGTCACACTGTTTTTTTTCTTAATAATTTTTGTAAATGT 590
                         * ***    ****      **    ** ***  *** *   * ** *   *  * * *

consensus_10899#1      TTTC--CCGGAACTGGTGATCTAAAAGATAT----TGGTGCAGGTCGCGGTAAATATTAC 414
consensus_10899#2      TTTC--CCGGAACTGGTGATCTAAAAGATAT----TGGTGCAGGTCGCGGTAAATATTAC 292
consensus_10899#0      CTTTGTCCGTCTCCTTTTATACAAATAATCCCCCGTGATTCACATGAATGTCATGTTTAT 650
                        **   ***   *   * **  ***  **      ** * **  *    ** *   *** 

consensus_10899#1      GCTGTCAATTGTCCACTGAGAG-------------------------------------- 436
consensus_10899#2      GCTGTCAATTGTCCACTGAGAGACGGGATGGATGATGATTGCTACGAGCCTATTTTTAAG 352
consensus_10899#0      GATATCCTGTGTTCATTGTCTGTTTGACATCTAACTATATGTATTGGCTCTTCTTATTTT 710
                       * * **   *** ** **   *                                      

consensus_10899#1      ------------------------------------------------------------
consensus_10899#2      CCTGTCGTGACGAAAGTTATGGAAACTTTTCGACCCGGGGCCGTT--------------- 397
consensus_10899#0      CCGAAATTGCCTGTCATATTGTACGCATTTATTCGACTTACTGTTAAAGTGTACAGCTCT 770
                                                                                   

consensus_10899#1      ------------------------------------------------------------
consensus_10899#2      ------------------------------------------------------------
consensus_10899#0      TGCAAACGTATACCATTTGCTATTTTAATGTCCAGTGAATTCAATTTTGCTTATATGTTT 830
                                                                                   

consensus_10899#1      ---------------------------
consensus_10899#2      ---------------------------
consensus_10899#0      TATGAAAAAGGTATGTAATAAAAAGCT 857