These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10911#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 25 consensus length = 615 fasta sequence [TTCAACTGCTTGGGGACTGATACATCACTGTCATAGTGATCATTTTTTGACTATATATGCGCTTCCATCACCTCCTCCATCTCCTTCTGCATCATCTAACTCTGCGTCTTCTGAACGTTCTTCAATAGTTTCTCGCCGATCTGCTAATAATGAGGGGGAGAGTTTGTCTGAAAAATCAATGAGATCAAACTCTCATTCAGATAGATCAAATCATACAGATAAGCATGCGACATCACTTGTGAGGCAAAACATAAAGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAACCGTGAAAATAGCGACTGGGAT--GCAGAGGAGGAGGATG-AGAATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGATCAGTCAGATACAAGATCTACA-TCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCATGAGACTGTAGATGACGATGACTATGCCGATGT] [-] EMBL CD150322 [TTCAACTGCTTGGGGACTGATACATCACTGTCATAGTGATCATTTTTTGACTATATATGCGCTTCCATCACCTCCTCCATCTCCTTCTGCATCATCTAACTCTGCGTCTTCTGAACGTTCTTCAATAGTTTCTCGCCGATCTGCTAATAATGAGGGGGAGAGTTTGTCTGAAAAATCAATGAGATCAAACTCTCATTCAGATAGATCAAATCATACAGATAAGCATGCGACATCACTTGTGAGGCAAAACATAAAGCCTGAGCATCCTACA ] [-] EMBL CD064190 [ AGATAGATCAAATCATACAGGTAAGCATGCGACATCACTTGTGAGGCAAAACATAAAGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAACCGTGTAAATAGCGCCTGGGATACACAGAAGAAGAAGAAGAAGAATACCGCCCTTAGTGGAGGAGATACCCCAACATGGGACTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGATCAGTCAGATACAAGATC ACAGTCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAAC CGATCC ] [+] EMBL CD192261 [ GCAAAACATAAAGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAACCGTGAAAATAGCGACTGGGAT GCAGAGGAGGAGGATG AGAATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGATCAGTCAGATACAAGATCTACA TCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCATGAGACTGTAGATGACGATGACTATGCCGATGT] [+] EMBL CD192825 [ GCAAAACATAAAGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAACCGTGAAAATAGCGACTGGGAT GCAGAGGAGGAGGATG AGAATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGATCAGTCAGATACAAGATCTACA TCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCATGAGACTGTAGATGACGA ] [+] EMBL CD192852 [ GCAAAACATAAAGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAACCGTGAAAATAGCGACTGGGAT GCAGAGGAGGAGGATG AGAATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGATCAGTCAGATACAAGATCTACA TCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCATGAGACTGTAGATGACGA ] [+] EMBL CD192775 [ GCAAAACATAGAGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAACCGCGAAAATATCGACTGGGAT GCAGAGGAGGAGGATG AGAATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGGGAGATCACTCATGTGATCAGTCACATACAAAATCTACA TCTGGTTCTTCATATTCATAAATATCAAGTGAAATTCGTACCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTGGAAGAAGTCGTGGTAATGAATATGGCCGCCGTGATACTGTCAATGACGA ] [+] EMBL CD192874 [ GCAAAACATAAAGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAGCCGTGAAAATAGCGACTGGGAT GCAGAGGAGGAGGATG AGAATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGATCAGTCAGATACAAGATCTACA TCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCATGAGACTGTAGATGACGA ] [+] EMBL CD192602 [ GCAAAACATAAAGCCTGAGCATGCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTGGAAAAGAACCGTGAAAATAGCGACTGGGAT GCAGAGGAGGAGGATG AGAATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGATCAGTCAGATACAAGATCTACA TCTGGTACTTCAGATTCAAAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCATGAGACTGTAGATGACGA ] [+] EMBL CD134900 [ GCAAAACATAAAGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAACCGTGAAAATAGCGACTGGGAT GCAGAGGAGGAGGATG AGAATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGATCAGTCAGATACAAGATCTACA TCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCATGAGACTGTAGATGACGA ] [+] EMBL CD134914 [ GCAAAACATAAAGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAACCGTGAAAATAGCGACTGGGAT GCAGAGGAGGAGGATG AGAATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGATCAGTCAGATACAAGATCTACA TCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCATGAGACTGTAGATAACGA ] [+] EMBL CD191961 [ GCAAAACATAAAGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAACCGTGAAAATAGCGACTGGGAT GCAGAGGAGGAGGATG AGAATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGATCAGTCAGATACAAGATCTACA TCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCATGAGACTGTAGATGACGA ] [+] EMBL CD191985 [ GCAAAACATAAAGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAACCGTGAAAATAGCGACTGGGAT GCAGAGGAGGAGGATG AGAATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGATCAGTCAGATACAAGATCTACA TCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCATGAGACTGTAGATGACGA ] [+] EMBL CD192491 [ GCAAAACATAAAGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAACCGTGAAAATAGCGACTGGGAT GCAGAGGAGGAGGATG AGAATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGATCAGTCAGATACAAGATCTACA TCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCATGAGACTGTAGATGACGA ] [+] EMBL CD192578 [ GCAAAACATAAAGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAACCGTGAAAATAGCGACTGGGAT GCAGAGGAGGAGGATG AGAATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGATCAGTCAGATACAAGATCTACA TCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCATGAGACTGTAGATGACGA ] [+] EMBL CD192609 [ GCAAAACATAAAGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAACCGTGAAAATAGCGACTGGGAT GCAGAGGAGGAGGATG AGAATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGATCAGTCAGATACAAGATCTACA TCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCATGAGACTGTAGATGACGA ] [+] EMBL CD192666 [ GCAAAACATAAAGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAACCGTGAAAATAGCGACTGGGAT GCAGAGGAGGAGGATG AGAATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGATCAGTCAGATACAAGATCTACA TCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCATGAGACTGTAGATGACGA ] [+] EMBL CD192697 [ GCAAAACATAAAGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAACCGTGAAAATAGCGACTGGGAT GCAGAGGAGGAGGATG AGAATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGATCAGTCAGATACAAGATCTACA TCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCATGAGACTGTAGATGACGA ] [+] EMBL CD192714 [ GCAAAACATAAAGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAACCGTGAAAATAGCGACTGGGAT GCAGAGGAGGAGGATG AGAATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGATCAGTCAGATACAAGATCTACA TCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCATGAGACTGTAGATGACGA ] [+] EMBL CD192753 [ GCAAAACATAAAGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAACCGTGAAAATAGCGACTGGGAT GCAGAGGAGGAGGATG AGGATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGATCAGTCAGATACAAGATCTACA TCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCATGAGACTGTAGATGACGA ] [+] EMBL CD192765 [ GCAAAACATAAAGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAACCGTGAAAATAGCGACTGGGAT GCAGAGGAGGAGGATG AGAATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGATCAGTCAGATACAAGATCTACA TCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCATGAGACTGTAGATGACGA ] [+] EMBL CD192226 [ GCAAAACATAAAGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAACCGTGAAAATAGCGACTGGGAT GCAGAGGAGGAGGATG AGAATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGATCAGTCAGATACAAGATCTACA TCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCATGAGAC ] [+] EMBL CD090221 [ GCAAAACATAAAGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAACCGTGAAAATAGCGACTGGGAT GCAGAGGAGGAGGATG AGAATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGATCAGTCAGATACAAGATCTACA TCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACCGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCA ] [-] EMBL CD157087 [ CAAAACATAAAGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAACCGTGAAAATAGCGACTGGGAT GCAGAGGAGGAGGATG AGAATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGATCAGTCAGATACAAGATCTACA TCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCATGAGACTGTAGATGACGAT ] [-] EMBL CD157300 [ CAAAACATAATGCCTGAGCATCCTACATTCGATAACCACCATTCTTCCAGTTCACATAGTGTTGAAGAGAACCGTGAAAATAGCGACTGGGAT GCAGAGGAGGAGGATG AGAATAACGACCGTAGTGGAGGCGATACTCCAACATTGGAGTCAGTGCATAATGGAAAATTTGGCCCATCGGACATCCCGAGAGATCACTCATGTGGTCAGTCAGATACAAGATCTACA TCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCATGAGACTGTAGATGACGAT ] [+] EMBL CD192099 [ CACTCATGTGATCAGTCAGATACAAGATCTACA TCTGGTACTTCAGATTCAGAAATATCAAATGAAATTCGTAGCAAGCGGTTACTGAAAACACGATCCCCACCCTGTCCTCGAAGAAGTCGTGGTAGTGAATATGGCCGTCATGAGACTGTAGATGACGA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||