These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10912#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 25 consensus length = 502 fasta sequence [GAGGAGAAGATTGCCCTGTACAGAGAGTTGGTTTACTCCTTCACCATCAGCAAAGATGGAGACACCTACAAAATTGAGATCGACTTCAAAGGCAAAGCCCCCAACGCCGTGTATGAGCTTCAGTTGGGTCAAGAGGTCGATTACAAATCTATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGTAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAAC-AAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCCTCAATGTTAGTTTGACCTTGACATCTGTTGTTCCTTTGCAATGGCATTGTAACC] [-] EMBL CD142013 [GAGGAGAAGATTGCCCTGTACAGAGAGTTGGTTTACTCCTTCACCATCAGCAAAGATGGAGACACCTACAAAATTGAGATCGACTTCAAAGGCAAAGCCCCCAACGCCGTGTATGAGCTTCAGTTGGGTCAAGAGGTCGATTACAAATCTATCGATGGATACACAGCCAAATTGACATTGGCAGTCGAAGACGGTAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACA ] [+] EMBL CD145819 [ ACAAATCTATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGTAAATCAGTCGAGTCCTACTACAACGGTGATAAGGACCTCAAGTGGACAGTTACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAACAAAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCCTCAATGTTAGTTTGACCTTGACATCTGTTGTTCCTTTGCAATGGCATTGTAACC] [+] EMBL CD145768 [ ACAAATCTATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGTAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAACAAAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCCTCAATGTTAGTTTGACCTTGACATCTGTTGTTCCTTTGCAATGGCATTGTAACC] [+] EMBL CD145756 [ ACAAATCCATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGCAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAAC AAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCCTCAATGTTAGTTTGACCTTGACccttgacc ] [+] EMBL CD145848 [ ACAAATCCATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGCAAATCAGTCGAGTCCTACTACTACGGTGATAGGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAAC AAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCCTCAATGTTAGTTT ] [+] EMBL CD145881 [ ACAAATCTATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGTAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAAC AAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCCTCAATGTTAGTT ] [+] EMBL CD145784 [ ACAAATCCATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGCAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAAC AAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCCTCAATGTTAGTT ] [+] EMBL CD145851 [ ACAAATCTATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGTAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAAC AAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCCTCAATGTTAGTT ] [+] EMBL CD145850 [ ACAAATCCATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGCAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAACAAAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCCTCAATG ] [+] EMBL CD145765 [ ACAAATCCATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGCAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGACAGCCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAAC AAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCCTCAATG ] [+] EMBL CD145742 [ ACAAATCCATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGCAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAAC AAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCCTCAATG ] [+] EMBL CD145781 [ ACAAATCCATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGCAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAAC AAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCGCGAACTTTGGTCCTCAATG ] [+] EMBL CD145880 [ ACAAATCCATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGCAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAAC AAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCCTCAATG ] [+] EMBL CD145732 [ ACAAATCTATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGTAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAAC AAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCCTCAATG ] [+] EMBL CD145804 [ ACAAATCTATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGTAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAAC AAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCCTCAATG ] [+] EMBL CD145805 [ ACAAATCTATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGTAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAAC AAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCTTGAACTTTGGTCCTCAATG ] [+] EMBL CD145818 [ ACAAATCTATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGTAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAAC AAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCCTCAATG ] [+] EMBL CD145836 [ ACAAATCTATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGTAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAAC AAAAAACTCAGACTTTTATTATGTATAGTGATGGAGAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCCTCAATG ] [+] EMBL CD145839 [ ACAAATCTATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGTAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAAC AAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCCTCAATG ] [+] EMBL CD145770 [ ACAAATCTATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGCAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGGCAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAAC AAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCC ] [+] EMBL CD145799 [ ACAAATCTATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGTAAATCAGCCGAGTCCTACTACTACGGTGATGAGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGGAACGCCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAAC AAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACGGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCC ] [-] EMBL CD145787 [ CAAATCTATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGTAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAAC AAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCCTCAATGT ] [-] EMBL CD145795 [ CAAATCTATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGTAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAGCCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAAC AAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCCTCAATGT ] [-] EMBL CD145772 [ CAAATCCATCGATGGATACACAGCCAAATTGACATTGACAGTCGAAGACGGCAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAAC AAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAGCAGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCCTCAATGT ] [-] EMBL CD142153 [ AAGACGGTAAATCAGTCGAGTCCTACTACTACGGTGATAAGGACCTCAAGTGGACAGTCACAAGATCAGTAGAAGGAAACGTCATGACTGCAGTCACAAAGTTGGCCGACACAGAACTAACCCAGAAGCTGAACAAAGCTTAAACTGAGAAATAACAAACAAACAAAC AAAAAACTCAGACTTTTATTATGTATAGTGATGGAAAGTGTCTCTGACTTCAACAGCCTCACTTTGGATCAATGACCTCGTGAACTTTGGTCCTCAATGTTAGTTTGACCTTGACATCTGTTGTTC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||