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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10917#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1416 fasta sequence
[TATTAGGGGTTTGGATTTTGAAGCTGGCTTTAATTTGTAGTGGGTTAGAAGTTCGTCCTAAGGTTAATGGAGAAGTCGAAACTTATATTTCGGCGGTAAAACTGGAAGGTCTTCCATACACCAAGCGTGCAGTAAACATCTCAGTCTCCGTGACTGTAAAGTATGAAATCACAGGAGTTAAAGATCCATCCACTGTTACGTTGTCTTGGCAGCGTAATGGCGAAGAAATTTCTGTTAGCCGACGTAAGACAGATGATGCACCTATCCTTTCCGGAGATTACTCCTCAGAGACATTCTCTGACACTACGCATACTTTGGAAGTTACCTTACATCTAAATCAAAAAGGTCCAGTTCCTGGGAATTATACTTTAATTGCAACAATGGATGGGGTTACGTCTTCGGGTTCTGGCTTCGCATATAGCGCACCTGTTTTTCCATTATTCACTAAACCAAAACGTGTTTTGGAGGGTGATATCATGCGGCTGATTTGTCGTGTCAGTAGTTATCCTCAGCCATCTTCAGTTATATGGAGTTTTGCATCGATACAAGCTAGTCAAATGGATGACGACAATGCCATTAGTGCAGCTTTTTATAATTTGCTTCCTCTATTGACCAATGAAACTCACTATGTCCTGGAAACAAGTGATGGTGGTACACTGAATGATACTCTCCGATTCTTGGATTTAAAAGAAAGTGATAATGGTCTGTATGCATGTAACGTTTCAACTGAACGCGGTTCTGATTTCGCCTTGATGATTGTCAATGTTAAAGATCGTTGGGCAGCTCTTTGGCCATTTATTGGAATTATTGTTGAAGTTACTATTTTAGTTGTCGCTATCCTATTATATGAACGTCATCAAATGCATTCAAAGCCAACTAATCTTAGCGCCAAATGTGATACTACTAGTGGTGCTGGCGCAGTTTCTGGCCAAGATAATGTATCAACAGTACCTAATAATAAAATTCAAGCCAATAATAATAATACAGGTCAAAATAATCTTACAGTTCCTGTTCATGCTGGTGATGTGAACACTGAAAATCTTGATGGAAATGTTGAAGGAAGATCATGAACTAATCAGTGTTGAACCACCTTTGAAAGTCTGAACGCACTGGACAGCCATTTCGTCCTAATATGAAGCTCCTCAGCACCACTGAGACCAAAAAGTCGATGAGATTCGTTTACGTGCACATGTCANATAATGAATGATTCATGAATTAAGCACCCATATTTTATTTCATCGTAACANANAAACAACAACAGCTATCCTGGTTAATGTTATTCAATGCGTAGATGCACACAATACTGGCTAGTGTAATTATTAAATAATCTGCTCATGTCTGCATAGTTTTATTCAGCACAGCTGAGTTGCTGTTTTTTTCCTAACTATATGCATATTAGTCTCATTACCACTCTTC]
[+] EMBL AW017272 [TATTAGGGGTTTGGATTTTGAAGCTGGCTTTAATTTGTAGTGGGTTAGAAGTTCGTCCTAAGGTTAATGGAGAAGTCGAAACTTATATTTCGGCGGTAAAACTGGAAGGTCTTCCATACACCAAGCGTGCAGTAAACATCTCAGTCTCCGTGACTGTAAAGTATGAAATCACAGGAGTTAAAGATCCATCCACTGTTACGTTGTCTTGGCAGCGTCATGGCGAAGAAATTTCTGTTAGCCGACGTAAGACAGATGATGCACCTATCCTTTCCGGAGATTACTCCTCAGAGACATTCTCTGACACTACGCATACTTTGGAAGTTACCTTACATCTAAATCAAAAAGGTCCAGTTGCTGGGAATTATACTTTAATTGCAACAATGGATGGGGCTACGTCTTCGGGTTCTGGCTTCGCATATAGCGCACCTGTTTTTCCATTATTCACTAAACCAAAACGTGTTTTGGAGGGTGATATCATGCGGCTGATTTGTCGTGT ]
[-] EMBL CD190943 [ AGCTGGCTTTAATTTGTAGTGGGTTAGAAGTTCGTCCTAAGGTTAATGGAGAAGTCGAAACTTATATTTCGGCGGTAAAACTGGAAGGTCTTCCATACACCAAGCGTGCAGTAAACATCTCAGTCTCCGTGACTGTAAAGTATGAAATCACAGGAGTTAAAGATCCATCCACTGTTACGTTGTCTTGGCAGCGTAATGGCGAAGAAATTTCTGTTAGCCGACGTAAGACAGATGATGCACCTATCCTTTCCGGAGATTACTCCTCAGAGACATTCTCTGACACTACGCATACTTTGGAAGTTACCTTACATCTAAATCAAAAAGGTCCAGTTCCTGGGAATTATACTTTAATTGCAAC ATGGATGGGGTTACGTCTTCGGGTTCTGGCTTCGCATATAGCGCACCTGTTTTTCCATTATTCACTAAACCAAAACGTGTTTTGGAGGGTGATATCATGCGGCTGATTTGTCGTGTCAGTAGTTATCCTCAGCCATCTTCAGT ]
[+] EMBL CD168109 [ ATACACCAAGCGTGCAGTAAACATCTCAGTCTCCGTGACTGTAAAGTATGAAATCACAGGAGTTAAAGATCCATCCACTGTTACGTTGTCTTGGCAGCGTAATGGCGAAGAAATTTCTGTTAGCCGACGTAAGACAGATGATGCACCTATCCTTTCCGGAGATTACTCCTCAGAGACATTCTCTGACACTACGCATACTTTGGAAGTTACCTTACATCTAAATCAAAAAGGTCCAGTTCCTGGGAATTATACTTTAATTGCAACAATGGATGGGGTTACGTCTTCGGGTTCTGGCTTCGCATATAGCGCACCTGTTTTTCCATTATTCACTAAACCAAAACGTGTTTTGGAGGGTGATATCATGCGGCTGATTTGTCGTGTCAGTAGTTATCCTCAGCCATCTTCAGTTATATGGAGTCTTGCATCGATACAAGCTAGTCAAATGGATGACGACAATGCCATTAGTGCAGCTTTTTATAATTTGCTTCCTCTATTGACCAATGAAACTCACTATGTCCTGGAAACAAGTGATGGTGGTACACTGAATGATACTCTCCGATTCTTGGATTTAAAAGAAAGTGATAATGGTCTGTATGCATGTAACGTTTCAA ]
[+] EMBL CD167996 [ CCATCCACTGTTACGTTGTCTTGGCAGCGTAATGGCGAAGAAATTTCTGTTAGCCGACGTAAGACAGATGATGCACCTATCCTTTCCGGAGATTACTCCTCAGAGACATTCTCTGACACTACGCATACTTTGGAAGTTACCTTACATCTAAATCAAAAAGGTCCAGTTCCTGGGAATTATACTTTAATTGCAACAATGGATGGGGTTACGTCTTCGGGTTCTGGCTTCGCATATAGCGCACCTGTTTTTCCATTATTCACTAAACCAAAACGTGTTTTGGAGGGTGATATCATGCGGCTGATTTGTCGTGTCAGTAGTTATCCTCAGCCATCTTCAGTTATATGGAGTTTTGCATCGATACAAGCTAGTCAAATGGATGACGACAATGCCATTAGTGCAGCTTTTTATAATTTGCTTCCTCTATTGACCAATGAAACTCACTATGTCCTGGAAACAAGTGATGGTGGTACACTGAATGATACTCTCCGATTCTTGGATTTAAAAGAAAGTGATAATGGTCTGTATGCATGTAACGTTTCAA ]
[+] EMBL CD167909 [ CCATCCACTGTTACGTTGTCTTGGCAGCGTAATGGCGAAGAAATTTCTGTTAGCCGACGTAAGACAGATGATGCACCTATCCTTTCCGGAGATTACTCCTCAGAGACATTCTCTGACACTACGCATACTTTGGAAGTTACCTTACATCTAAATCAAAAAGGTCCAGTTCCTGGGAATTATACTTTAATTGCAACAATGGATGGGGTTACGTCTTCGGGTTCTGGCTTCGCATATAGCGCACCTGTTTTTCCATTATTCACTAAACCAAAACGTGTTTTGGAGGGTGATATCATGCGGCTGATTTGTCGTGTCAGTAGTTATCCTCAGCCATCTTCAGTTATATGGAGTTTTGCATCGATACAAGCTAGTCAAATGGATGACGACAATGCCATTAGTGCAGCTTTTTATAATTTGCTTCCTCTATTGACCAATGAAACTCACTATGTCCTGGAAACAAGTGATGGTGGTACACTGAATGATACTCTCCGATTCTTGGATTTAAAAGAAAGTGATAATGGTCTGTATGCATGTAACGTTTCAA ]
[-] EMBL CD097329 [ AGCCGACGTAAGACAGATGATGCACCTATCCTTTCCGGAGATTACTCCTCAGAGACATTCTCTGACACTACGCATACTTTGGAAGTTACCTTACATCTAAATCAAAAAGGTCCAGTTCCTGGGAATTATACTTTAATTGCAACAATGGATGGGGTTACGTCTTCGGGTTCTGGCTTCGCATATAGCGCACCTGTTTTTCCATTATTCACTAAACCAAAACGTGTTTTGGAGGGTGATATCATGCGGCTGATTTGCCGTGTCAGTAGTTATCCTCAGCCATCTTCAGTTATATGGAGTTTTGCATCGATACAAGCTAGTCAAATGGATGACGACAATGCCATTAGTGCAGCTTTTTATAATTTGCTTCCTCTATTGACCAATGAAACTCACTATGTCCTGGAAACAAGTGATGGTGGTACACTGAATGATACTCTCCGATTCTTGGATTTAAAAGAAAGTGATAATGGTCTGTATGCATGTAACGTTTCAACTGAACGCGGTTCTGATTTCGCCTTGATGATTGTCAATGTTAAAGATCGTTGG ]
[+] EMBL CD116849 [ TGATGCACCTATCCTTTCCGGAGATTACTCCTCAGAGACATTCTCTGACACTACGCATACTTTGGAAGTTACCTTACATCTAAATCAAAA AGTTCCTGGGAATTATACTTTAATTGCAACCATGGATGGGGTTACGTCTTCGGGTTCTGGCTTCGCATATAGCGCACCTGTTTTTCCATTATTCACTAAACCAAAACGTGTTTTGGAGGGTGATATCATGCGGCTGATTTGTCGTGTCAGTAGTTATCCTCAGCCATCTTCAGTTATATGGAGTTTTGCATCGATACAAGCTAGTCAAATGGATGACGACAATGCCATTAGTGCAGCTTTTTATAATTTGCTTCCTCTATTGACCAATGAAACTCACTATGTCCTGGAAACAAGTGATGGTGGTACACTGAATGATACTCTCCGATTCTTGGATTTAAAAGAAAGTGATAATGGTCTGTATGCATGTAACGTTTCAACTGAACGCGGTTCTGATTTCGCCTTGATGATTGTCAATGTTAAAGATCGTTGGGCAGCTCTTTGGCCATTTATTGGAATTATTGTTGAAGTTACTATTTTAGTTGTCGCTATCCTATTATATGAACGTCATCAAATGCATTCAA ]
[+] EMBL CD078411 [ CTTACATCTAAATCAAAAAGGTCCAGTTCCTGGGAATTATACTTTAATTGCAACAATGGATGGGGTTACGTCTTCGGGTTCTGGCTTCGCATATAGCGCACCTGTTTTTCCATTATTCACTAAACCAAAACGTGTTTTGGAGGGTGATATCATGCGGCTGATTTGTCGTGTCAGTAGTTATCCTCAGCCATCTTCAGTTATATGGAGTTTTGCATCGATACAAGCTAGTCAAATGGATGACGACAATGCCATTAGTGCAGCTTTTTATAATTTGCTTCCTCTATTGACCAATGAAACTCACTATGTCCTGGAAACAAGTGATGGTGGTACACTGAATGATACTCTCCGATTCTTGGATTTAAAAGAAAGTGATAATGGTCTGTATGCATGTAACGTTTCAACTGAACGCGGTTCTGATTTCGCCTTGATGATTGTCAATGTTAAAGATCGTTGGGCAGCTCTTTGGCCATTTATTGGAATTATTGTTGAAGTTACTATTTTAGTTGTCGCTATCCTATTATATGAACGTCATCAAATGCATTCAAAGCCAACTAATCTTAGCGCCAAATGTGAT ]
[+] EMBL CD157764 [ TCTGGCTTCGCATATAGCGCACCTGTTTTTCCATTATTCACTAAACCAAAACGTGTTTTGGAGGGTGATATCATGCGGCTGATTTGTCGAGTCGGCAGATATCCTCAGCCATCTTCAGTTATATGGAGTTGTGCATCGATACAAGCTAGTCAAATGGATGACGACAATGCCATTAGTGCAGCTTTTTATAAc ]
[+] EMBL CD157570 [ TCTGGCTTCGCATATAGCGCACCTGTTTTTCCATTATTCACTANACCAAAACGTGTTTTGGAGGGTGATATCATGCGGCTGATTTGTCGTGTCAGTAGTTA ]
[+] EMBL CD157627 [ ACTAAACCAAAACGTGTTTTGGAGGGTGATATCATGCGGCTGATTTGTCGTGTCAGTAGTTATCCTCAGCCATCTTCAGTTATATGGAGTTTTGCATCGATACAAGCTAGTCAAATGGATGACGACAATGCCATTAGTGCAGCTTTTTATAATTTGCTTCCTCTATTGACC ]
[+] EMBL CD168005 [ CATTAGTGCAGCTTTTTATAATTTGCTTCCTCTATTGACCAATGAAACTCACTATGTCCTGGAAACAAGTGATGGTGGTACACTGAATGATACTCTCCGATTCTTGGATTTAAAAGAAAGTGATAATGGTCTGTATGCATGTAACGTTTCAA ]
[+] EMBL CD154661 [ GCGGTTCTGATTTCGCCTTGATGATTGTCAATGTTAAAGATCGTTGGGCAGCTCTTTGGCCATTTATTGGAATTATTGTTGAAGTTACTATTTTAGTTGTCGCTATCCTATTATATGAACGTCATCAAATGCATTCAAAGCCAACTAATCTTAGCGCCAAATGTGATACTACTAGTGGTGCTGGCGCAGTTTCTGGCCAAGATAATGTATCAACAGTACCTAATAATAAAATTCAAGCCAATAATAATAATACAGGTCAAAATAATCTTACAGTTCCTGTTCATGCTGGTGATGTGAACACTGAAAATCTTGATGGAAATGTTGAAGGAAGATCATGAACTAATCAGTGTTGAACCACCTTTGAAAGTCTGAACGCACTGGACAGCCATTTCGTCCTAATATGAAGCTCCTCAGCACCACTGAGACCAAAAAGTCGATGAGATTCGTTTACGTGCACATGTCANATAATGAATGATTCATGAATTAAGCACCCATATTTTATTTCATCGTAACANANAAACAACAACAGCTATCCTGGTTAATGTTATTCAATGCGTAGATGCACACCACACTGGCTAGTGTAATTATTAAA ]
[+] EMBL CD154587 [ GCGGTTCTGATTTCGCCTTGATGATTGTCAATGTTAAGGATCGTTGGGCAGCTCTTTGGCCATTTATTGGAATTATTGTTGAAGTTACTATTTTAGTTGTCGCTATCCTATTATATGAACGTCATCAAATGCATTCAAAGCCAACTAATCTTAGCGCCAAATGTGATACTACTAGTGGTGCTGGTGCAGTTTCTGGCCAAGATAATGTATCAACAGTACCTAATAATAAAATTCAAGCCAATAATAATAATACAGGTCAAAATAATCTTACAGTTCCTGTTCATGCTGGTGATGTGAATACTGAAAATCTTGATGGAAATGTTGAAGGAAGATCATGAACTAATCAGTGTTGAACCACCTTTGAAAGTCTGAGCGCACTGGACAGCCATTTCGTCCTAATATGAAGCTCCTCAGCACCACTGAGACCAAAAAGTCGATGAGATTCGTTTACGTGCACATGTCANATAATGAATGATTCATGAATTAAGCACCCATATTTTATTTCATCGTAACANANAAACAACAACAGCTATCCTGGTTAATGTTATTCAATGCGTAGATGCACACAAT ]
[-] EMBL CD114101 [ ATACAGGTCAAAATAATCTTACAGTTCCTGTTCATGCTGGTGATGTGAACACTGAAAATCTTGATGGAAATGCTGAAGGAAGATCATGAACTAATCAGTGTTGAACCACCTTTGAAAGTCTGAACGCACTGGACAGCCATTTCGTCATAATATGAAGCTCCTCAGCACCACTGAGACCAAAAAGTCGATGAGATTCGTTTACGTGCACATGTCAAATAATGAATGATTCATGAATTAAGCACCCATATTTTATTTCATCGTAACAAAAAAACAACAACAGCTATCCTGGTTAATGTTATTCAATGCGTAGATGCACACAATACTGGCTAGTGTAATTATTAAATAATCTGCTCATGTCTGCATAGTTTTATTCAGCACAGCTGAGTTGCTGTTTTTTTCCTAACTATATGCATATTAGTCTCATTACCACTCTTC]
consensusID : consensus_10917#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1043 fasta sequence
[GACAGGTTAACGGAGAAATTGATGAATTATGGGACGATGATGACAATGGTACAGATAATGAAAATGATGAGGACGATAACGATAATGATGACCAAGAGGATTGTGTTGAAATATTGTTAATTGCTGGTGCAGTTTCTGGCCAAGATAATGTATCAACAGTACCTAATAATAAAATTCAAGCCAATAATAATAATACAGGTCAAAATAATCTTACAGTTCCTGTTCATGCTGGTGATGTGAATACTGAAAATCTTGATGGAAATGTTGAAGGAAGAGACCAAAAAGTCGATGAGATTCGTTTACGTGCACATGTCAAATAATGAATGATTCATGAATTAAGCACCCATATTTTATTTCATCGTAACAAAAAAACAACAACAGCTATCCTGGTTAATGTTATTCAATGCGTAGATGCACACAATACTGGCTAGTGTAATTATTAAATAATCTGCTCATGTCTGCATAGTTTTATTCAGCACAGTTGAGTTGCTGTTTTTTTCCTAACTATATGCATATTAGTCTCATTACCATTTTATTTTCTACTCGTTTTTTTTCAACAAAAAATAAAATAATCATTAGAATCTCACTTTAGTTAAGA-TTTTTTTTTGATTTATCTGTTTCTCAATGCCTCCCCCCCCCAATTTTTTACTCTCTTTCATATGGACCTACACATTTTCCGTTGTGTAGTCCCGACATTTGTTCAATAATCATTCAATTGATTATAACATTGTTTCAGCTCATTGATCAATCCGTTAATCGGTCCAGCTAGCCAACGATGCACGTACGTACACATGCTTATTCTATCCAATTCATTTCCACAACAACAACAAAAAACATTTCAAATCAGTGGTTACTTTTTTGTCTTAATAATTTGATAACGCATATTATTTTATTTTTGTTCTCTACTTGACCCTCATCTTTAAAAAAATGATTGTCAATAATGGTCATTTTTTAGAAAAAATGAAAGTATAGATCACCATGGTTTTTTAAGTAAGTAACGTGAATGTTTTATTATCATTATAGAAAGTTGAATGAAATTTTCT]
[+] EMBL CD112156 [GACAGGTTAACGGAGAAATTGATGAATTATGGGACGATGATGACAATGGTACAGATAATGAAAATGATGAGGACGATAACGATAATGATGACCAAGAGGATTGTGTTGAAATATTGTTAATTGCTGGTGCAGTTTCTGGCCAAGATAATGTATCAACAGTACCTAATAATAAAATTCAAGCCAATAATAATAATACAGGTCAAAATAATCTTACAGTTCCTGTTCATGCTGGTGATGTGAATACTGAAAATCTTGATGGAAATGTTGAAGGAAGAGACCAAAAAGTCGATGAGATTCGTTTACGTGCACATGTCAAATAATGAATGATTCATGAATTAAGCACCCATATTTTATTTCATCGTAACAAAAAAACAACAACAGCTATCCTGGTTAATGTTATTCAA ]
[-] EMBL CD112412 [ ACAGGTTAACGGAGAAATTGATGAATTATGGGACGATGATGACAATGGTACAGATAATGAAAATGATGAGGACGATAACGATAATGATGACCAAGAGGATTGTGTTGAAATATTGTTAATTGCTGGTGCAGTTTCTGGCCAAGATAATGTATCAACAGTACCTAATAATAAAATTCAAGCCAATAATAATAATACAGGTCAAAATAATCTTACAGTTCCTGTTCATGCTGGTGATGTGAATACTGAAAATCTTGATGGAAATGTTGAAGGAAGAGACCAAAAAGTCGATGAGATTCGTTTACGTGCACATGTCAAATAATGAATGATTCATGAATTAAGCACCCATATTTTATTTCATCGTAACAAAAAAACAACAACAGCTATCCTGGTTAATGTTATTCAAT ]
[+] EMBL CD061166 [ CAAGATAATGTATCAACAGTACCTAATAATAAAATTCAAGCCAATAATAATAATACAGGTCAAAATAATCTTACAGTTCCTGTTCATGCTGGTGATGTGAATACTGAAAATCTTGATGGAAATGTTGAAGGAAGAGACCAAAAAGTCGATGAGATTCGTTTACGTGCACATGTCAAATAATGAATGATTCATGAATTAAGCACCCATATTTTATTTCATCGTAACAAAAAAACAACAACAGTTATCCTGGTTAATGTTATTCAATGCGTAGATGCACACAAT ]
[-] EMBL CD153322 [ TCCTGTTCATGCTGGTGATGTGAATACTGAAAATCTTGATGGAAATGTTGAAGGAAGAGACCAAAAAGTCGATGAGATTCGTTTACGTGCACATGTCAAATAATGAATGATTCATGAATTAAGCACCCATATTTTATTTCATCGTAACAAAAAAACAACAACAGCTATCCTGGTTAATGTTATTCAATGCGTAGATGCACACAATACTGGCTAGTGTAATTATTAAATAATCTGCTCATGTCTGCATAGTTTTATTCAGCACAGTTGAGTTGCTGTTTTTTTCCTAACTATATGCATATTAGTCTCATTACCATTTTATTTTCTACTCGTTTTTTTTCAACAAAAAATAAAATAATCATTAGAATCTCACTTTAGTTAAGATTTTTTTTTTGATTTATCTGTTTCTCAATGCCTCCCCCCCCCAATTTTTTACTCTCTTTCATATGGACCTACACATTTTCCGTTGTGTAGTCCCGACATTTGTTCAATAATCATTCAATTGATTATAACATTGTTTCAGCTCATTGATCAATCCGTTAATCGGTCCAGCTAGCCAACGATGCACGTACGTACACATGCTTATTCTATCCAAT ]
[+] EMBL CD189378 [ TTATTTCATCGTAACAAAAAAACAACAACAGCTATCCTGGTTAATGTTATTCAATGCGTAGATGCACACAATACTGGCTAGTGTAATTATTAAATAATCTGCTCATGTCTGCATAGTTTTATTCAGCACAGTTGAGTTGCTGTTTTTTTCCTAACTATATGCATATTAGTCTCATTACCATTTTATTTTCTACTCGTTTTTTTTCAACAAAAAATAAAATAATCATTAGAATCTCACTTTAGTTAAGA TTTTTTTTTGATTTATCTGTTTCTCAATGCCTCCtc ]
[+] EMBL CD073359 [ ATAAAATAATCATTAGAATCTCACTTTAGTTAAGA TTTTTTTTTGATTTATCTGTTTCTCAATGCCTCCCCCCCCCAATTTTTTACTCTCTTTCATATGGACCTACACATTTTCCGTTGTGTAGTCCCGACATTTGTTCAATAATCATTCAATTGATTATAACATTGTTTCAGCTCATTGATCAATCCGTTAATCGGTCCAGCTAGCCAACGATGCACGTACGTACACATGCTTATTCTATCCAATTCATTTCCACAACAACAACAAAAAACATTTCAAATCAGTGGTTACTTTTTTGTCTTAATAATTTGATAACGCATATTATTTTATTTTTGTTCTCTACTTGACCCTCATCTTTAAAAAAATGATTGTCAATAATGGTCATTTTTTAGAAAAAATGAAAGTATAGATCACCATGGTTTTTTAAGTAAGTAACGTGAATGTTTTATTATCATTATAGAAAGTTGAATGAAATTTTC ]
[-] EMBL CD078900 [ TAAAATAATCATTAGAATCTCCCTTTAGTTAAGA TTTTTTTTTGATTTATCTGTTTCTCAATGCCTCCCCCCNCCAATTTTNNTCTCTCTTTCATATGGACCTACACATTTTCCGTTGTGTAGTCCCGACATTTGTTCAATAATCATTCAATTGATTATAACATTGTTTCAGCTCATTGATCAATCCGTTAATCGGTCCAGCTAGCCAACGATGCACGTACGTACACATGCTTATTCTATCCAATTCATTTCCCCAACAACAACAAAAAACATTTCAAATCAGTGGTTACTTTTTTGTCTTAATAATTTGATAACGCATATTATTTTATTTTTGTTCTCTACTTGACCCTCATCTTTAAAAAAATGATTGTCAATAATGGTCATTTTTTAGAAAAAATGAAAGTATAGATCCCCATGGTTTTTTAAGTAAGTAACGTGAATGTTTTATTATCATTATAGAAAGTTGAATGAAATTTTCT]
consensusID : consensus_10917#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 422 fasta sequence
[CGCAATAAGTTGTTTTCAGGTTTCTATGAAGAAGATGCTTTAACTAGTAATAATAATTCTCCTTTGTCATCAAGTCTTCGACGCGCCGCTTCATTAGGACCGACAGCTGTTTTAAGCCCTGTAAATAATAATACCACTGGTAATTTCTTTGTTAAACGAGGAGAATGGAAACATCTTCATCTACCTGAAAATGTAAGAAATTCAATATTGGAACGATCAAATGCTATAACAAATGAATTAAATCAATTGGCTGAATCATCTTTAGATAATAATACAGTACATTCTGATTCGATAGTAAATAATAATGCATCAAATAAACAAATCTCTGTTTCCTCTGGTGATATTTCACTGAAAATCTTGATGGAAATGTTGAAGGAAGAGACCAAAAAGTCGATGAGATTCGTTTACGTGCACATGTCAAA]
[+] EMBL CD180750 [CGCAATAAGTTGTTTTCAGGTTTCTATGAAGAAGATGCTTTAACTAGTAATAATAATTCTCCTTTGTCATCAAGTCTTCGACGCGCCGCTTCATTAGGACCGACAGCTGTTTTAAGCCCTGTAAATAATAATACCACTGGTAATTTCTTTGTTAAACGAGGAGAATGGAAACATCTTCATCTACCTGAAAATGTAAGAAATTCAATATTGGAACGATCAAATGCTATAACAAATGAATTAAATCAATTGGCTGAATCATCTTTAGATAATAATACAGTACATTCTGATTCGATAGTAAATAATAATGCATCAAATAAACAAATCTCTGTTTCCTCTGGTGATATTTCACTGAAAATCTTGATGGAAATGTTGAAGGAAGAGACCAAAAAGTCGATGAGATTCGTTTACGTGCACATGTCAAA]
consensusID : consensus_10917#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 310 fasta sequence
[GGTCGCTATCCTATTATATGAACGTCATCAAATGCATTCANAGCCAACTAATCTTAGCGCCAAATGTGATACTACTAGTGGTGCTGGTGCAGTTTCTGGCCCAAATAATGTGTCAACCGTACCTTATAATATCATTCAAGCCCATAATAATCATGCAGGTCCGAATTTGCCCTCAGGTCCAGATCCCGTCGGTCATGTGCACACTCGTAATCTTCATGCGCATGTTGAAAGCACAGACCCATCATCCAGTGTAACTCGCGGTCGAGGGCATCGCAAATAATCACGGATCACTTGTTTGGCCTCCTCATAG]
[-] EMBL CD157721 [GGTCGCTATCCTATTATATGAACGTCATCAAATGCATTCANAGCCAACTAATCTTAGCGCCAAATGTGATACTACTAGTGGTGCTGGTGCAGTTTCTGGCCCAAATAATGTGTCAACCGTACCTTATAATATCATTCAAGCCCATAATAATCATGCAGGTCCGAATTTGCCCTCAGGTCCAGATCCCGTCGGTCATGTGCACACTCGTAATCTTCATGCGCATGTTGAAAGCACAGACCCATCATCCAGTGTAACTCGCGGTCGAGGGCATCGCAAATAATCACGGATCACTTGTTTGGCCTCCTCATAG]
consensusID : consensus_10917#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 226 fasta sequence
[ACTATCTTAGCGCCAAATGTGATACTACTAGTGGTGCTGGTGCAGTTTCTGGCCAAGATAATGTATCAACAGTACCTAATAATAAAATTCAAGCCAATAATAATAATACAGGTCAAAATAATCTTACAGTTCCTGTTCATGCTGGTGATGTGAATACTGAAAATCTTGATGGAAATGTTGAAGGAAGAGACCAAAAAGTCGATGAGATTCGTTTACGTGCACATGT]
[-] EMBL CD157679 [ACTATCTTAGCGCCAAATGTGATACTACTAGTGGTGCTGGTGCAGTTTCTGGCCAAGATAATGTATCAACAGTACCTAATAATAAAATTCAAGCCAATAATAATAATACAGGTCAAAATAATCTTACAGTTCCTGTTCATGCTGGTGATGTGAATACTGAAAATCTTGATGGAAATGTTGAAGGAAGAGACCAAAAAGTCGATGAGATTCGTTTACGTGCACATGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10917#0 TATTAGGGGTTTGGATTTTGAAGCTGGCTTTAATTTGTAGTGGGTTAGAAGTTCGTCCTA 60
consensus_10917#3 ------------------------------------------------------------
consensus_10917#4 ------------------------------------------------------------
consensus_10917#1 ------------------------------------------------------------
consensus_10917#2 ------------------------------------------------------------
consensus_10917#0 AGGTTAATGGAGAAGTCGAAACTTATATTTCGGCGGTAAAACTGGAAGGTCTTCCATACA 120
consensus_10917#3 ------------------------------------------------------------
consensus_10917#4 ------------------------------------------------------------
consensus_10917#1 ------------------------------------------------------------
consensus_10917#2 ------------------------------------------------------------
consensus_10917#0 CCAAGCGTGCAGTAAACATCTCAGTCTCCGTGACTGTAAAGTATGAAATCACAGGAGTTA 180
consensus_10917#3 ------------------------------------------------------------
consensus_10917#4 ------------------------------------------------------------
consensus_10917#1 ---------GACAGGTTAACGGAGAAATTGATGAATTATGGGACGATGATGACAATGGTA 51
consensus_10917#2 ------------------------------------------------------------
consensus_10917#0 AAGATCCATCCACTGTTACGTTGTCTTGGCAGCGTAATGGCGAAGAAATTTCTGTTAGCC 240
consensus_10917#3 ------------------------------------------------------------
consensus_10917#4 ------------------------------------------------------------
consensus_10917#1 CAGATAATGAAAATGATGAGGACGATAACGATAATGATGACCAAGAGGATTGTGTTGAAA 111
consensus_10917#2 ------------------------------------------------------------
consensus_10917#0 GACGTAAGACAGATGATGCACCTATCCTTTCCGGAGATTACTCCTCAGAGACATTCTCTG 300
consensus_10917#3 ------------------------------------------------------------
consensus_10917#4 ------------------------------------------------------------
consensus_10917#1 TATTGTTAATTGCTGGTGCAGTTTCTGGCCAAGATAATGTATCAACAGTACCTAATAATA 171
consensus_10917#2 ------------------------------------------------------------
consensus_10917#0 ACACTACGCATACTTTGGAAGTTACCTTACATCTAAATCAAAAAGGTCCAGTTCCTGGGA 360
consensus_10917#3 ------------------------------------------------------------
consensus_10917#4 ------------------------------------------------------------
consensus_10917#1 AAATTCAAGCCAATAATAATAATACAGGTCAAAATAATCTTACAGTTCCTGTTCATGCTG 231
consensus_10917#2 ------------------------------------------------------------
consensus_10917#0 ATTATACTTTAATTGCAACAATGGATGGGGTTACGTCTTCGGGTTCTGGCTTCGCATATA 420
consensus_10917#3 ------------------------------------------------------------
consensus_10917#4 ------------------------------------------------------------
consensus_10917#1 GTGATGTGAATACTGAAAATCTTGATGGAAATGT---TGAAGGAAGAGACCAAAAAGTCG 288
consensus_10917#2 ------------------------------------------------------------
consensus_10917#0 GCGCACCTGTTTTTCCATTATTCACTAAACCAAAACGTGTTTTGGAGGGTGATATCATGC 480
consensus_10917#3 ------------------------------------------------------------
consensus_10917#4 ------------------------------------------------------------
consensus_10917#1 ATGAGATTCGTTTACGTGCACATGTCAAATAATGAATGATTCATGAATTAAGCACCCATA 348
consensus_10917#2 ------------------------------------------------------------
consensus_10917#0 GGCTGATTTGTCGTGTCAGTAGT-TATCCTCAGCCATCTTCAGTTATATGGAGTTTTGCA 539
consensus_10917#3 ------------------------------------------------------------
consensus_10917#4 ------------------------------------------------------------
consensus_10917#1 TTTTATTTCATCGTAACAAAAAAACAACAACAGCTATCCTGGTTAATGTTATTCAATGCG 408
consensus_10917#2 ------------------------------------------------------------
consensus_10917#0 TCGATACAAGC--TAGTCAAATGGATGACGACAATGCCATTAGTGCAGCTTTTTATAATT 597
consensus_10917#3 ------------------------------------------------------------
consensus_10917#4 ------------------------------------------------------------
consensus_10917#1 TAGATGCACACAATACTGGCTAGTGTAATTATTAAATAATCTGCTCATGTCTGCATAGTT 468
consensus_10917#2 ------------------------------------------------------------
consensus_10917#0 TGCTTCCTCTATTGACCAATGAAACTCACTATGTC-CTGGAAACAAGTGATGGTGGTACA 656
consensus_10917#3 ------------------------------------------------------------
consensus_10917#4 ------------------------------------------------------------
consensus_10917#1 TTATTCAGCACAGTTGAGTTGCTGTTTTTTTCCTAACTATATGCATATTAGTCTCATTAC 528
consensus_10917#2 ------------------------------------------------------------
consensus_10917#0 CTGAATGATACTCTCCGATTCTTGGATTTAAAAGAAAGTGATAATGGTCTGTATGCATGT 716
consensus_10917#3 ------------------------------------------------------------
consensus_10917#4 ------------------------------------------------------------
consensus_10917#1 CATTTTATTTTCTACTCGTTTTTTTTCAACAAAAAATAAAATAATCATTAGAATCTCACT 588
consensus_10917#2 ---------------------------------CGCAATAAGTTGTTTTCAGGTTTCTAT 27
consensus_10917#0 AACGTTTCAACTGAACGCGGTTCTGATTTCGCCTTGATGATTGTCAATGTTAAAGATCGT 776
consensus_10917#3 ------------------------------------------------------------
consensus_10917#4 ------------------------------------------------------------
consensus_10917#1 TTAGTTAAGATTTTTTTTTGATTTATCTGTTTCTCAATGCCTCCCCCCCCCAATTTTTTA 648
consensus_10917#2 GAAGAAGATGCTTTAACTAGTAATAATAATTCTCCTTTGTCATCAAGTCTTCGACGCGCC 87
consensus_10917#0 TGGGCAGCTCTTTGGCCATTTATTGGAATTATTGT-TGAAGTTACTATTTTAGTTGTCGC 835
consensus_10917#3 ------------------------------------------------------GGTCGC 6
consensus_10917#4 ------------------------------------------------------------
consensus_10917#1 CTCTCTTTCATATGGACCTACACATTTTCCGTTGTGTAGTCCCGACATTTGTTCAATAAT 708
consensus_10917#2 GCTTCATTAGGACCGACAGCTGTTTTAAGCCCTGT---AAATAATAATACCACTGGTAAT 144
consensus_10917#0 TATCCTATTA--TATGAACGTCATC-AAATGCATTCAA-AGCCAACTAATCTTAGCGCCA 891
consensus_10917#3 TATCCTATTA--TATGAACGTCATC-AAATGCATTCAN-AGCCAACTAATCTTAGCGCCA 62
consensus_10917#4 --------------------------------------------ACTA-TCTTAGCGCCA 15
consensus_10917#1 CATTCAATTGATTATAACATTGTTT-CAGCTCATTGATCAATCCGTTAATCGGTCCAGCT 767
consensus_10917#2 TTCTTTGTTA--AACGAGGAGAATGGAAACATCTTCATCTACCTGAAAATGTAAGAAATT 202
* *
consensus_10917#0 AATGTGATACTACTAGTG-GTGCTGGCGCAGTT---TCTGGCCAAGATAATGTATCAACA 947
consensus_10917#3 AATGTGATACTACTAGTG-GTGCTGGTGCAGTT---TCTGGCCCAAATAATGTGTCAACC 118
consensus_10917#4 AATGTGATACTACTAGTG-GTGCTGGTGCAGTT---TCTGGCCAAGATAATGTATCAACA 71
consensus_10917#1 AGC-CAACGATGCACGTACGTACACATGCTTAT---TCTATCCAATTCATTTCCACAACA 823
consensus_10917#2 CAA-TATTGGAACGATCAAATGCTATAACAAATGAATTAAATCAATTGGCTGAATCATCT 261
* * * * * * * * * ** *
consensus_10917#0 GTACCTAATAATAAAATTCAAGCCAATAATAATAATACAGGTCAAA--ATAATCTTA-CA 1004
consensus_10917#3 GTACCTTATAATATCATTCAAGCCCATAATAATCATGCAGGTCCGA--ATTTGCCCT-CA 175
consensus_10917#4 GTACCTAATAATAAAATTCAAGCCAATAATAATAATACAGGTCAAA--ATAATCTTA-CA 128
consensus_10917#1 ACAACAAAAAACAT--TTCAAATCAGTGGTTACTTTTTTGTCTTAATAATTTGATAA-CG 880
consensus_10917#2 TTAGATAATAATACAGTACATTCTGATT-CGATAGTAAATAATAATGCATCAAATAAACA 320
* * ** * * ** * * * ** *
consensus_10917#0 GTT-CCTGTTCATGCTGGTGATGTGAACACTGAAAATCTTGATGGAAATGTTGAAGGAAG 1063
consensus_10917#3 GGT-CCAGATCCCGTCGGTCATGTGCACACTCGTAATCTTCATGCGCATGTTGAAAGCAC 234
consensus_10917#4 GTT-CCTGTTCATGCTGGTGATGTGAATACTGAAAATCTTGATGGAAATGTTGAAGGAAG 187
consensus_10917#1 CATATTATTTTATTTTTGTTCTCTACTTGACCCTCATCTTTAAAAAAATGATTGTCAATA 940
consensus_10917#2 AATCTCTGTTTCCTCTGGTGATAT-TTCACTGAAAATCTTGATGGAAATGTTGAAGGAAG 379
* * ** * * ***** * *** *
consensus_10917#0 ATCATGAACTAATCAGTGTTGAACCACCTTTGAAAGTCTGAACGCACTGGACAGCCATTT 1123
consensus_10917#3 AG-ACCCATCATCCAGTGT-AACTCGCGGTCGAGGGC---ATCGCA---AATAATCACGG 286
consensus_10917#4 AG-ACCAAAAAGTCGATGA-GATTCGTTTACGTGCACATGT------------------- 226
consensus_10917#1 AT-GGTCATTTTTTAGAAA-AAATGAAAGTATAGATCACCATGGTTTTTTAAGTAAGTAA 998
consensus_10917#2 AG-ACCAAAAAGTCGATGA-GATTCGTTTACGTGCACAT-GTCAAA-------------- 422
* * *
consensus_10917#0 CGTCCTAATATGAAGCTCCTCAGCACCACTGAGACCAAAAAGTCGATGAGATTCGTTTAC 1183
consensus_10917#3 ATCACTTGTTTGGC-CTCCTCATAG----------------------------------- 310
consensus_10917#4 ------------------------------------------------------------
consensus_10917#1 CGTGAATGTTTTATTATCATTATAGAAAGTTGAATGAAATTTTCT--------------- 1043
consensus_10917#2 ------------------------------------------------------------
consensus_10917#0 GTGCACATGTCANATAATGAATGATTCATGAATTAAGCACCCATATTTTATTTCATCGTA 1243
consensus_10917#3 ------------------------------------------------------------
consensus_10917#4 ------------------------------------------------------------
consensus_10917#1 ------------------------------------------------------------
consensus_10917#2 ------------------------------------------------------------
consensus_10917#0 ACANANAAACAACAACAGCTATCCTGGTTAATGTTATTCAATGCGTAGATGCACACAATA 1303
consensus_10917#3 ------------------------------------------------------------
consensus_10917#4 ------------------------------------------------------------
consensus_10917#1 ------------------------------------------------------------
consensus_10917#2 ------------------------------------------------------------
consensus_10917#0 CTGGCTAGTGTAATTATTAAATAATCTGCTCATGTCTGCATAGTTTTATTCAGCACAGCT 1363
consensus_10917#3 ------------------------------------------------------------
consensus_10917#4 ------------------------------------------------------------
consensus_10917#1 ------------------------------------------------------------
consensus_10917#2 ------------------------------------------------------------
consensus_10917#0 GAGTTGCTGTTTTTTTCCTAACTATATGCATATTAGTCTCATTACCACTCTTC 1416
consensus_10917#3 -----------------------------------------------------
consensus_10917#4 -----------------------------------------------------
consensus_10917#1 -----------------------------------------------------
consensus_10917#2 -----------------------------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||