cluster # 10925

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Schistosoma mansoni
cluster # 10925 cluster # 10925 Sequences # 25 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10925#0 length = 936 sequences # 24

consensus_10925#1 length = 294 sequences # 1

consensusID : consensus_10925#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 24
consensus length = 936
fasta sequence

                              [CGATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTATGGAAGATATTTAG-C-TGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAGTTTTGCTTTTTCTAGCAGTATTTCTTCGGCTGATAACTCATTTTGTTTAGTTTGACAAAGCTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCGTTTAGTTGACCAGTATTTATATATTGGAAAAATATTCACCCCAGAACGAGTACGTAAGAAATTGATCCAGTTAGCTATTTCTTCACAAGTCATATCTTTTGCACGTACATACTGCCAGTTGCCACATAAATACTCAGCAACTAGAAGAGGAGGTCTATTTCTTCGTGGCTTTACATAGATAGCAGTTGCTGGATTATCTCGAGCAAAGTCCACTAAGTGATTTTCAATATAATCCCTGACACCTTGACTATCTCGTCGAAATTTACAGCACTTTAGTGTTATTCGCTGTAATTGAGGAACAAATCGTTGAGTTGTAGTTCCATAAACAGCATGTAGTATGGCTCTTGGTAAGACGTTACCAGACATGTAAAGTGATTTTAAGATCTATTTACTGATTAATTTCCGATACTGAGAGTTTTCGTTTTTTTGCTTTGTACTAGAAAATTAAAAAGATATGCCGATTAAAGTATAATTTCTACTCAATACAAAAATACTTGAACCAAACAGAAGGCCCATAAGAAAATAAGAGAAAGCTAGGCAATGAAACTGGAAAAGTGGTGAGAACCACGAAATTCTCTGATAATACTTGAAGTCGAA]

[+] EMBL CD143809             [CGATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTATGGAAGATATTTAG C TGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAGTTTTGCTTTTTCTAGCAGTATTTCTTCGGCTGATAACTCATTTTGTTTAGTTTGACAAAGCTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD143834             [CGATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTATGGAAGATATTTAG C TGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAGTTTTGCTTTTTCTAGCAGTATTTCTTCGGCTGATAACTCATTTTGTTTAGTTTGACAAAGCTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD143857             [CGATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTATGGAAGATATTTAG C TGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAGTTTTGCTTTTTCTAGCAGTATTTCTTCGGCTGATAACTCATTTTGTTTAGTTTGACAAAGCTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD143767             [CGATACTGACAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTATGGAAGATATTTAGNC TGAAACATACATTATTCACAAAAATGCGCTGCCTCCGTTTAGGCTTAAGATTAATTTACTTTGAAATCACTAACTGGATAAGTCACACAGACGATACTGTTGAAGTTTTGCTTTTTCTACCAGTATTTCTTCGGCTGATAACTGATTTTGTTTAGTTTGACAAAGCTGACCAATGTTTCTTACAATTGCATTGGGGGTCTTTAAAATCGGTTGATTATATAGGGGTTCGTAAAACGGATGCCACATGCGTTGAATAGAAGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD143776             [CGATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTATGGAAGATATTTAG CTTGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAGTTTTGCTTTTTCTAGCAGTATTTCTTCGGCTGATAACTCATCTTGTTTAGTTTGACAAAGCTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD143846             [CGATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTATGGAAGATATTTAG CTTGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTCGAAGTTTTGCTTTTTCTAGCAGTATTTCTTCGGCTGATAACTCATTTTGTTTAGTTTGACAAAGCTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD143862             [CGATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTATGGAAGATATTTAG C TGAAACATACATTATTCACAAAAATGCGCTGCAGTCGGGGAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAGTTTTGCTTTTTCTAGCAGTATTTCTTCGGCTGATGACTCATTTTGTTTAGTTTGACAAAGCTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD143806             [CGATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTATGGAAGATATTTGG C TGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAGTTTTGCTTTTCCTAGCAGTATTTCTTCGGCTGATAACTCATTTTGTTTAGTTTGACAAAGCTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD143865             [CGATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTATGGAAGATATTTAG C TGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAGTTTTGCTTTTTCTAGCAGTATTTCTTCGGCTGATAACTCATTTTGTTTAGTTTGACAAAGCTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD143766             [CGATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTATGGAAGATATTTAG C TGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAGTTTTGCTTTTTCTAACAGAATTTCTTCGGCTGATAACTCATTTTGTTTAGTTTGACAAAGCTGACCAATGTTACTTACAATTTCATTGGGTGTCTTTAAAATCGTTGGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD143871             [CGATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTATGGAAGATATTTAG C TGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAGTTTTGCTTTTTCTAGCAGTATTTCTTCGGCTGATAACTCATTTTGTTTAGTTTGACAAAGCTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTCGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD143738             [CGATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTATGGAAGATATTTAG C TGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAGTTTTGCTTTTTCTAGCAGTATTTCTTCGGCTGATAACTCATTTTGTTTAGTTTGACAAAGCTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD143753             [CGATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTATGGAAGATATTTAG C TGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAGTTTTGCTTTTTCTAGCAGTATTTCTTCGGCTGATAACTCATTTTGTTTAGTTTGACAAAGCTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD143770             [CGATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTATGGAAGATATTTAG C TGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAGTTTTGCTTTTTCTAGCAGTATTTCTTCGGCTGATAACTCATTTTGTTTAGTTTGACAAAGCTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD143787             [CGATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTATGGAAGATATTTAG C TGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAGTTTTGCTTTTTCTAGCAGTATTTCTTCGGCTGATAACTCATTTTGTTTAGTTTGACAAAGCTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD143788             [CGATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTATGGAAGATATTTAG C TGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAGTTTTGCTTTTTCTAGCAGTATTTCTTCGGCTGATAACTCATTTTGTTTAGTTTGACAAAGCTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD143792             [CGATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTATGGAAGATATTTAG C TGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAGTTTTGCTTTTTCTAGCAGTATTTCTTCGGCTGATAACTCATTTTGTTTAGTTTGACAAAGCTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD143796             [CGATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTATGGAAGATATTTAG C TGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAGTTTTGCTTTTTCTAGCAGTATTTCTTCGGCTGATAACTCATTTTGTTTAGTTTGACAAAGCTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD143741             [ GATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAGGTGTTATGGAAGATATTTAG C TGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAGTTTTGCTTTTTCTAGCAGTATTTCTTCGGCTGATAACTCATTTTGTTTAGTTTGACAAAGCTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD143850             [ GATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTATGGAAGATATTTAG C TGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAGTTTTGCTTTTTCTAGCAGTATTTCTTCGGCTGATAACTCATTTTGTTTAGCTTGACAAAGCTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD143709             [ GATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTATGGAAGATATTTAG C TGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAGTTTTGCTTTTTCTAGCAGTATTTCTTCGGCTGATAACTCATTTTGTTTAGTTTGACAAAGCTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD073233             [                                        ACTTTGTTTTTAAAGTGTTATGGAAGATATTTAG C TGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAGTTTTGCTTTTTCTAGCAGTATTTCTTCGGCTGATAACTCATTTTGTTTAGTTTGACAAAGCTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCGTTTAGTTGACCAGTATTTATATATTGGAAAAATATTCACCCCAGAACGAGTACGTAAGAAATTGATCCAGTTAGCTATTTCTTCACAAGTCATATCTTTTGCACGTACATACTGCCAGTTGCCACATAAATACTCAGCAACTAGAAGAGGAGGTCTATTTCTTCGTGGCTTTACATAGATAGCAGTTGCTGGATTATCTCGAGCAAAGTCCACTAAGTGATTTTCAATATAATCCCTGACACCTTGACTATCTCGTCGAAATTTACAGCACTTTAGTGTTATTCGCTGTAA                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD078773             [                                                                                                 AAAATGCGCTGCAGTCGTTTAGGCATAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAGTTTTGCTTTNTCTAGCAGTATTTCTTCGGCTGATAACTCATTTTGTTTAGTTTGACAAAGCTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGGTTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCGTTTAGTTGACCAGTATTTATATATTGGAAAAATATTCACCCCAGAACGAGTACGTAAGAAATTGATCCAGTTAGCTATTTCTTCACAAGTCATATCTTTTGCACGTACATACTGCCAGTTGCCACATAAATACTCAGCAACTAGAAGAGGAGGTCTATTTCTTCGTGGCTTTACATAGATAGCAGTTGCTGGATTATCTCGAGCAAAGTCCACTAAGTGATTTTCAATATAATCCCTGACACCTTGACTATCTCGTCGAAATTTACAGCACTTTAGTGTTATTCGCTGTAATTGAGGAACAAATCGTTGAGTTGTAGTTCCATAAACAGCATGTAGTATGGCTCTTGGTAAGACGTTACCAGACATGTAAAGTGATTTTAAGATCTATTTACTGATTAATTTCCGATACTGAGAGTTTTCG                                                                                                                                                                                ]
[-] EMBL CD084216             [                                                                                                                                                                                                                                                                                                                                                                                                                                                              TACATACTGCCAGTTGCCACATAGATACTCAGCAACTAGAAGAGGAGGTCTATTTCTTCGTGGCTTTACATAGATAGCAGTTGCTGGATTATCTCGAGCAAAGTCCACTAAGTGATTTTCAATATAATCCCTGACACCTTGACTATCTCGTCGAAATTTACAGCACTTTAGTGTTATTCGCTGTAATTGAGGAACAAATCGTTGAGTTGTAGTTCCATAAACAGCATATAGTATGGCTCTTGGTAAGACGTTACCAGACATGTAAAGTGATTTTAAGATCTATTTACTGATTAATTTCCGATACTGAGAGTTTTCGTTTTTTTGCTTTGTACTAGAAAATTAAAAAGATATGCCGATTAAAGTATAATTTCTACTCAATACAAAAATACTTGAACCAAACAGAAGGCCCATAAGAAAATAAGAGAAAGCTAGGCAATGAAACTGGAAAAGTGGTGAGAACCACGAAATTCTCTGATAATACTTGAAGTCGAA]




>consensus_10925#0
CGATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTA
TGGAAGATATTTAGCTGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCA
TAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAG
TTTTGCTTTTTCTAGCAGTATTTCTTCGGCTGATAACTCATTTTGTTTAGTTTGACAAAG
CTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGG
TTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCGTTTAGTTGACCAGTATTTATA
TATTGGAAAAATATTCACCCCAGAACGAGTACGTAAGAAATTGATCCAGTTAGCTATTTC
TTCACAAGTCATATCTTTTGCACGTACATACTGCCAGTTGCCACATAAATACTCAGCAAC
TAGAAGAGGAGGTCTATTTCTTCGTGGCTTTACATAGATAGCAGTTGCTGGATTATCTCG
AGCAAAGTCCACTAAGTGATTTTCAATATAATCCCTGACACCTTGACTATCTCGTCGAAA
TTTACAGCACTTTAGTGTTATTCGCTGTAATTGAGGAACAAATCGTTGAGTTGTAGTTCC
ATAAACAGCATGTAGTATGGCTCTTGGTAAGACGTTACCAGACATGTAAAGTGATTTTAA
GATCTATTTACTGATTAATTTCCGATACTGAGAGTTTTCGTTTTTTTGCTTTGTACTAGA
AAATTAAAAAGATATGCCGATTAAAGTATAATTTCTACTCAATACAAAAATACTTGAACC
AAACAGAAGGCCCATAAGAAAATAAGAGAAAGCTAGGCAATGAAACTGGAAAAGTGGTGA
GAACCACGAAATTCTCTGATAATACTTGAAGTCGAA

consensusID : consensus_10925#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 294
fasta sequence

                              [GNGGCTTTAACATAGATAGCAGTTGCTGGATTATCTCGAGCAAAGTCCACTAAGTGATTTTCAATATAATCCCTGACACCTTGACTATCATGTCGAAATTTACAGCACTTTAGTGTTATTTCGCTGTAATTGAGGAACAAANCGTTGAGTTGTAGTTCCATAAACAGCATGTAGTATGGCNCTTGGTAAGACGTTACCAGACATGTAAAGTGATTTTAAGATCTATTTACTGATTAATTTCCGATACTGAGAGTTTTCGTTTTTTTGCTTTGTACATACGGCTCAAGAAAGCAA]

[-] EMBL AA559498             [GNGGCTTTAACATAGATAGCAGTTGCTGGATTATCTCGAGCAAAGTCCACTAAGTGATTTTCAATATAATCCCTGACACCTTGACTATCATGTCGAAATTTACAGCACTTTAGTGTTATTTCGCTGTAATTGAGGAACAAANCGTTGAGTTGTAGTTCCATAAACAGCATGTAGTATGGCNCTTGGTAAGACGTTACCAGACATGTAAAGTGATTTTAAGATCTATTTACTGATTAATTTCCGATACTGAGAGTTTTCGTTTTTTTGCTTTGTACATACGGCTCAAGAAAGCAA]




>consensus_10925#1
GNGGCTTTAACATAGATAGCAGTTGCTGGATTATCTCGAGCAAAGTCCACTAAGTGATTT
TCAATATAATCCCTGACACCTTGACTATCATGTCGAAATTTACAGCACTTTAGTGTTATT
TCGCTGTAATTGAGGAACAAANCGTTGAGTTGTAGTTCCATAAACAGCATGTAGTATGGC
NCTTGGTAAGACGTTACCAGACATGTAAAGTGATTTTAAGATCTATTTACTGATTAATTT
CCGATACTGAGAGTTTTCGTTTTTTTGCTTTGTACATACGGCTCAAGAAAGCAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10925#0      CGATACTGAGAGTTTTCGTTTTTTTTTGAATCATGCAAATACTTTGTTTTTAAAGTGTTA 60
consensus_10925#1      ------------------------------------------------------------
                                                                                   

consensus_10925#0      TGGAAGATATTTAGCTGAAACATACATTATTCACAAAAATGCGCTGCAGTCGTTTAGGCA 120
consensus_10925#1      ------------------------------------------------------------
                                                                                   

consensus_10925#0      TAAGAATAAATTACATTGAAATCACTAACTGGATAAGTCAGACAGACGATACTGTTGAAG 180
consensus_10925#1      ------------------------------------------------------------
                                                                                   

consensus_10925#0      TTTTGCTTTTTCTAGCAGTATTTCTTCGGCTGATAACTCATTTTGTTTAGTTTGACAAAG 240
consensus_10925#1      ------------------------------------------------------------
                                                                                   

consensus_10925#0      CTGACCAATGTTTCTTACAATTTCATTGGGTGTCTTTAAAATCGTTTGATTATATAGGGG 300
consensus_10925#1      ------------------------------------------------------------
                                                                                   

consensus_10925#0      TTCGTAAAACGGATGCCACATGCCTTGAATTGAAGGGCGTTTAGTTGACCAGTATTTATA 360
consensus_10925#1      ------------------------------------------------------------
                                                                                   

consensus_10925#0      TATTGGAAAAATATTCACCCCAGAACGAGTACGTAAGAAATTGATCCAGTTAGCTATTTC 420
consensus_10925#1      ------------------------------------------------------------
                                                                                   

consensus_10925#0      TTCACAAGTCATATCTTTTGCACGTACATACTGCCAGTTGCCACATAAATACTCAGCAAC 480
consensus_10925#1      ------------------------------------------------------------
                                                                                   

consensus_10925#0      TAGAAGAGGAGGTCTATTTCTTCGTGGCTTTA-CATAGATAGCAGTTGCTGGATTATCTC 539
consensus_10925#1      -----------------------GNGGCTTTAACATAGATAGCAGTTGCTGGATTATCTC 37
                                              * ******* ***************************

consensus_10925#0      GAGCAAAGTCCACTAAGTGATTTTCAATATAATCCCTGACACCTTGACTATCTCGTCGAA 599
consensus_10925#1      GAGCAAAGTCCACTAAGTGATTTTCAATATAATCCCTGACACCTTGACTATCATGTCGAA 97
                       ****************************************************  ******

consensus_10925#0      ATTTACAGCACTTTAGTGTTATT-CGCTGTAATTGAGGAACAAATCGTTGAGTTGTAGTT 658
consensus_10925#1      ATTTACAGCACTTTAGTGTTATTTCGCTGTAATTGAGGAACAAANCGTTGAGTTGTAGTT 157
                       *********************** ******************** ***************

consensus_10925#0      CCATAAACAGCATGTAGTATGGCTCTTGGTAAGACGTTACCAGACATGTAAAGTGATTTT 718
consensus_10925#1      CCATAAACAGCATGTAGTATGGCNCTTGGTAAGACGTTACCAGACATGTAAAGTGATTTT 217
                       *********************** ************************************

consensus_10925#0      AAGATCTATTTACTGATTAATTTCCGATACTGAGAGTTTTCGTTTTTTTGCTTTGTACTA 778
consensus_10925#1      AAGATCTATTTACTGATTAATTTCCGATACTGAGAGTTTTCGTTTTTTTGCTTTGTACAT 277
                       **********************************************************  

consensus_10925#0      GAAAATTAAAAAGATATGCCGATTAAAGTATAATTTCTACTCAATACAAAAATACTTGAA 838
consensus_10925#1      ACGGCTCAAGAAAGCAA------------------------------------------- 294
                            * ** **   *                                            

consensus_10925#0      CCAAACAGAAGGCCCATAAGAAAATAAGAGAAAGCTAGGCAATGAAACTGGAAAAGTGGT 898
consensus_10925#1      ------------------------------------------------------------
                                                                                   

consensus_10925#0      GAGAACCACGAAATTCTCTGATAATACTTGAAGTCGAA 936
consensus_10925#1      --------------------------------------