These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10942#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 25 consensus length = 1793 fasta sequence [TAACAGCTGATCCATCAGTATTATCAAAACTCAAACGTTGTTGATCAACCGTATGTTCAGTTTGGTAGGCTGAACCACTAAGTAGACTGACATTAATAACTGGTGCACATCGTTTGTCTTTGGCGGCAAGACGACTAACAATGATAGGTGGTTCAAAACCAACTTCTTCTAGACCAGCCGCTACAGATGGAGCCCGAGGTATGTCAGAAATTAATTGAGTATCTATTGAAGTTAATGAAGATGGAGTGACAACGT-CCATTTGATGGTATGGATTCATTGATGACGGGTGATCACTACGTTGAGAAACGTTGTTACGATAAACTTGCATAGTGTTAGAATGTACCATTTGTTGATTGCTACGACTTGTAGATATCATAGCCTGGTTATTTATCCCATAACTATTAGGCAAGGAATCAGGAACCATTTGAGGTTGGTGAACTAGTTCTGACATTTCTGGATAAGTTAATCGTGTGGCTTTAGGTACAGAAGTGTTTTGAGCACC-GGTATAATCCCCTTG-GGTGGGAGGGTTAGCAGTGGAAATAAACTGACCAGGAGCATGTGGACTCATTGAAGGAATACCAGAAGTGACTGATGTCAGGATTCTCGACCCACTAGGTGAGACTGGATCTGGTCTTGTTTGCGACTGTTGATAAAACATTGCCGGATGCTGAGCAGAAACCTGTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTG-CCACATTGGAGTATTACTATAGTTAGCATATG-GCTGACAGTGAGACTCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTGAGCTGGAACTACCTTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAACTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTACTGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAGACGGCCCTTGCTCAACAGCAACTGGTAAAGACGATGAGACATGTTCATTAGATGAAGATTGTGGAAG-CGTATTTATTGAATAAACTGACTGAGATATATCACC-TTCTGATGTCATCCTACT-GACGTGCA-TTGCTGAACTA-CCCA-CAATAAAAACATTTCCTGGATTTGTCGGGGCAGAATAAGAAAGCACACCAACATTACCCGGAGACGTCCCAGCCCCAGGAGTGGCAGGCGCTGAAAACGTATTCCCAGGACCACATAACTGACTATTCGGCGTACCAGGAGTAGCAGGATGCGAAGCAGCAAAAGAATGGTTTTGCTGTCTATTAACTGAACTTTCGGAGGGGAGTAAACTCTGCGAAGTAAGATGATGACCACTAGGTAGAATTGTATGATGAGATTGTGGGACAGGAGAAGGATGTGACGAAGGCATTGGTGTCGCTGTCCCAGCGTTGCTGCTTCTCATTAGCTGATTTATATTGGACGGAGACTGTGGAGGAACAGGTGATTGTGCTGGACTAGTTAGTGAACTTGTACCATGTGGAGGATATGGGTGAGGAATATGAAAAGAGGTTGGGGTGGGAACGTGTATTGAAGCAGGTGATCTTATGGGCGCAGGAGACATTGAAGAACAAACAGAAGGAAGGGGTGTT] [+] EMBL CD124301 [TAACAGCTGATCCATCAGTATTATCAAAACTCAAACGTTGTTGATCAACCGTATGTTCAGTTTGGTAGGCTGAACCACTAAGTAGACTGACATTAATAACTGGTGCACATCGTTTGTCTTTGGCGGCAAGACGACTAACAATGATAGGTGGTTCAAAACCAACTTCTTCTAGACCAGCCGCTACAGATGGAGCCCGAGGTATGTCAGAAATTAATTGAGTATCTATTGAAGTTAATGAAGATGGAGTGACAACGT CCATTTGATGGTATGGATTCATTGATGACGGGTGATCACTACGTTGAGAAACGTTGTTACGATAAACTTGCATAGTGTTAGAATGTACCATTTGTTGATTGCTACGACTTGTAGATATCATAGCCTGGTTATTTATCCCATAACTATTAGGCAAGGAATCAGGAACCATTTGAGGTTGGTGAACTAGTTCTGACATTTCTGGATAAGTTAATCGTGTGGCTTTANGCACAGAAGTGTTTTGAGCACC GGTATAATCCCCTTG GGTGGGAGGGTT ] [+] EMBL CD092866 [TAACAGCTGATCCATCAGTATTATCAAAACTCAAACGTTGTTGATCAACCGTATGTTCAGTTTGGTAGGCTGAACCACTAAGTAGACTGACATTAATAAC ] [-] EMBL CD080416 [ GCCGCTACAGATGNAGCCCGAGGTATGTCAGAAATTAATTGAGTATCTATTGAAGTTAATGAAGATGGAGTGACAACGTCCCATTTGATGGTATGGATTCATTGATGACGGGTGATCACTACGTTGAGAAACGTTGTTACGATAAACTTGCATAGTGTTAGAATGTACCATTTGTTGATTGCTACGACTTGTAGATATCATAGCCTGGTTATTTATCCCATAACTATTAGGCAAGGAATCAGGAACCATTTGAGGTTGGTGAACTAGTTCTGACATTTCTGGATAAGTTAATCGTGTGGCTTTAGGTACAGAAGTGTTTTGAGCACC GGTATAATCCCCTTG GGTGGGAGGGTTAGCAGTGGAAATAAACTGACCAGGAGCATGTGGACTCATTGAAGGAATACCAGAAGTGACTGATGTCAGGATTCTCGACCCACTAGGTGAGACTGGATCTGGTCTTGTTTGCGACTGTTGATAAAACATTGCCGGATGCTGAGCAGAAACCTGTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTG CCACATTGGAGTATTACTATAGTTAGCATATG GCTGACAGTGAGACTCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTGAGCTGGAACTACCTTGCTGTCCG ] [-] EMBL CD133256 [ CATAACTTTTAGGCAAGGAATCAGGAACCATTTGAGGTTGGTGAACTAGTTCTGACATTTCTGGATAAGTTAATCGTGGGGCTTTAGGTACAGAAGTGTTTTGAGCACCGGGTATAAT CCCTTGTGGTGGGAGGGTTAGCAGTGGAAATAAACTGACCAGGAGCATGTGGCCTCATTGAAGGAATACCAGAAGTGACTGATGTCAGGATTCTCGACCCACTAGGTGAGACTGGATCTGGTCTTGTTTGCGACTGTTGATAAAACATTGCCGGATGCTGAGCAGAAACCTGTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTG CCACATTGGAGTATTACTATAGTTAGCATATG GCTGACAGTGAGACTCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGATTGGTTCATAGGCGTATAAACAAGTCCTGAGCTGGAACTACCTTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTT ] [+] EMBL CD097002 [ GTATAATCCCCTTG GGTGGGAGGGTTAGCAGTGGAAATAAACTGACCAGGAGCATGTGGACTCATTGAAGGAATACCAGAAGTGACTGATGTCAGGATTCTCGACCCACTAGGTGAGACTGGATCTGGTCTTGTTTGCGACTGTTGATAAAACATTGCCGGATGCTGAGCAGAAACCTGTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGATGAGCTTGA ] [+] EMBL CD162975 [ GACTCATTGAAGGAATACCAGAAGTGACTGATGTCAGGATTCTCGACCCACTAGGTGAGACTGGATCTGGTCTTGTTTGCGACTGTTGATAAAACATTGCCGGATGCTGAGCAGAAACCTGTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTG CCACATTGGAGTATTACTATAGTTAGCATATG GCTGACAGTGAGACT ] [-] EMBL CD180698 [ ACTCATTGAAGGAATACCAGAAGTGACTGATGTCAGGATTCTCGACCCACTAGGTGAGACTGGATCTGGTCTTGTTTGCGACTGTTGATAAAACAGTGCCGGATGCTGAGCAGAAACCTGTTGTGAAAAATAAGCATGTCTCATTGAATGCTGCTGATGAGCTTGACTTTGAGATGATACTGGATGGTCCGGATCGTGAACTGAAGCATGTTGCTC CCACATTGTAGTGTTATTATAGTTAGCGTATGAGCTGACAGTGAGACTC ] [-] EMBL CD180807 [ ACTCATTGAAGGAATACCAGAAGTGACTGATGTCAGGACTCTCGACCCACTAGGTGAGACTGGATCTGGTCTTGTTTGCGACTGTTGATAAAACATTGCCGGATGCTGAGCAGAAACCTGTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTG CCACATTGGAGTATTACTATAGTTAGCATATG GCTGACAGTGAGACTC ] [+] EMBL CD180847 [ tccACCAGAAGTGACTGATGTCAGGATTCTCGACCCACTAGGTGAGACTGGATCTGGTCTTGTTTGCGACTGTTGATAAAACATTGCCGGATGCTGAGCAGAAACCTGTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTG CCACATTGGAGTATTACTATAGTTAGCATATG GCTGACAGTGAGACT ] [-] EMBL CD097049 [ CAGAAGTGACTGATGTCAGGATTCTCGACCCACTAGGTGAGACTGGATCTGGTCTTGTTTGCGACTGTTGATAAAACATTGCCGGATGCTGAGCAGAAACCTGTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGAAGAGCTTGAT ] [+] EMBL CD071607 [ GTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTG CCACATTGGAGTATTACTATAGTTAGCATATG GCTGACAGTGAGACTCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTGAGCTGGAACTACCTTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAACTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTACTGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAGACGGCCCTTGCTCAACAGCAACTGGTAAAGACGATGAGACATGTTCATTAGATGAAGATTGTGGGAG CGTATTTATTGAATAAACTGACTGAGATATATCACC TTCTGATGTCATCCTACT GACGTGCA TTGCTGAACTACCCCA C ATAAAAACATTTNCTGGNATTGTCGGGGCAGAAATAGAAAGCACACCNACATTAC ] [+] EMBL CD200673 [ GTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTG CCACATTGGAGTATTACTATAGTTAGCATATG GCTGACAGTGAGACTCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTGAGCTGGAACTACCTTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAACTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTACTGGAATAGTTACC ] [+] EMBL CD071693 [ GTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCCGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTG CCACATTGGAGTATTACTATAGTTAGCATATG GCTGACAGTGAGACCCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGA ] [+] EMBL CD200909 [ GTTGTGAAAAATAAGCACGTCTCATTGACTGCTGCTGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTG CCACATTGGAGTATTACTATAGTTAGCATATG GCTGACAGTGAGACTCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTGAGCTGGAACTACCTTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAACTTGTTTAGCTAGAATTTCTNTAAGACGTTGACGTTCCAACTCGGTACTGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAGACGGCCCTTGCTCAACAGCAACTGGAAAAGACGATGAGACATGTTCATTAGATGAAGATTGTGGAAGCCGTA TTATTGGATTAACTGACTGAGATATATCACCTTTCTGATGTCATCCTACTGGAC T CATTTGCTGAACTACCCCA C ATAAAAAATTTTTCTGAATTTGT GGGGCAGAAT AGGAAGCCCACCACCTTTACCCGGA ] [-] EMBL CD200562 [ ATTGACTGCTGCTGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTGNCTG CCACATTGGAGTATTACTATAGTTAGCATATG GCTGACAGTGAGACTCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTGAGCTGGAACTACCTTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAACTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTACTGGAACAGTTACCTTGTTGTGTATAAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAGACGGCCCCTGCTCAACAGCAACTGGTAAAGACGATGAGACATGTTCATTAGATGAAGATTGTGGAAG CGTATTTATTGAATAAACTGACTGAGATATATCACC TTCTGATGTCATCTTACT GACGTGCA TTGCTGAACTA CCCA CAATAAAAACATTTCCTGGATTTGTCGGGGCAGAATAAGAAAGCACACCAACATTACC ] [-] EMBL CD071537 [ aAAGCATGTTGCTG CNGCATTGGAGTATTACTATAGTTAGCATATG GCTGACAGTGAGACTCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTGAGCTGGAACTACCTTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAACTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTACTGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAGACGGCCCTTGCTCAACAGCAACTGGTAAAGACGATGAGACATGTTCATTAGATGAAGATTGTGGAAG CGTATTTATTGAATAAACTGACTGAGATATATCACC TTCTGATGTCATCCTACT GACGTGCA TTGCTGAACTA CCCA CAATAAAAACATTTCCTGGATTTGTCGGGGCAGAATAAGAAAGCACACCAACATTACC ] [-] EMBL CD071531 [ CTGCCCACATTGGAGTATANCTATAGTTAGCATATG GCTGACAGTGAGACTCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTGAGCTGGAACTACCTTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAACTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTACTGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAGACGGCCCTTGCTCAACAGCAACTGGTAAAGACGATGAGACATGTTCATTAGATGAAGATTGTGGAAG CGTATTTATTGAATAAACTGACTGAGATATATCACC TTCTGATGTCATCCTACT GACGTGCA TTGCTGAACTA CCCA CAATAAAAACATTTCCTGGATTTGTCGGGGCAGAATAAGAAAGCACACCAACATTACC ] [+] EMBL CD115976 [ TAGATTGGTTCATAGACGTATAAACAAGTCCTGAGCTGGAACTACCTTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAGCTTGACGCTGATGAACTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTACTGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAGACGGCCCTTGTTCAACAGCAACTGGTAAAGACGATGAGACATGTTCATTAGATGAAGATTGTGGAAG CGTATTTATTGAATAAACTGACTGAGATATATCACC TTCTGATGTCATCCTACT GACGTGCA TTGCTGAACTA CCCA CAATAAAAACATTTCCTGGATTTGTCGGGGCAGAATAAGAAAGCACACCAACA ] [+] EMBL CD181039 [ AAAGAGAATGACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAACTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTACTGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAGACGGCCCTTGCTCAACAGCAACTGGTAAAGACGATGAGACATGTTCATTAGATGAAG ] [-] EMBL CD112132 [ ACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAACTTGTTTAGCTAGAATTTCTTTAAGACGTCGACGTTCCAACTCGGTACTGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAGACGGCCCTTGCTCAACAGCAACTGGTAAAGACGATGAGACATGTTCATTAGATGAAGATTGTGGAAG CGTATTTATTGAATAAACTGACTGAGATATATCACC TTCTGATGTCATCCTACT GACGTGCA TTGCTGAACTA CCCACCAATAAAAACATTTCCTGGATTTGTCGGGGCAGAATAAGAAAGCACACCAACATTACC ] [-] EMBL CD183346 [ CCCTTGCTCAACAGCAACTGGTAAAGACGATGAGACATGTTCATTAGATGAAGATTGTGGAAG CGTATTTATTGAATAAACTGACTGAGATATATCACC TTCTGATGTCATCCTACT GACGTGCA TTGCTGAACTA CCCA CAATAAAAACATTTCCTGGATTTGTCGGGGCAGAATAAGAAAGCACACCAACATTACCCGGAGACGTCCCAGCCCCAGGAGTGGCAGGCGCTGAAAACGTATTCCCAGGACCACATAACTGACTA ] [-] EMBL CD071750 [ TTCATTAGATGAAGATTGTGGAAG CGTATNTACTGAATAAACTGACTGAGATATATCACC CTCTGATGTCATCCTACT GACGTGCA TTGCTGAACTA CCCA CAATAAAAACATTTCCTGGATTTGTCGGGGCAGAATAAGAAAGCACACCAACATTACC ] [-] EMBL CD128996 [ CATCCTACT GACGTGCA TTGTTGAACTA CCCA CAATAAAAACATTTCTTGGATTTGTCGGGGCAGAATAAGAAAGCACCCCAACATTACCCGGAGACGTCCCAGCCCCAGGAGTGGCAGGCGCTGAAAACGTATTCCCAGGACCACATAACTGACTATTCGGCGTACCAGGAGTAGCAGGATGCGAGGCAGCAAAAGAATGGTTTTGCTGTCTATTAACTGAACTTTCGGAGGGGAGTAAACTCTGCGAAGTAAGATGATGACCACTAGGTAGAATTGTATGATGAGATTGTGGGACAGGAGAAGGATGTGACGAAGGCATTGGTGTCGCTGTCCCAGCGTTGCTGCTTCTCATTAGCTGATTTATATTGGACGGAGACTGTGGAGGAACAGGTGATTGTGCTGGACTAGTTAGTGGACTTGTACCATGTGGAGGATATGGGTGAGGAATATGAAAAGAGGTTGGGGTGGGAACGTGTATTGAAGCAGGTGATCTTATGGGCGCAGGAGACATTGAAGAACAAACAGAAGGAAGG ] [-] EMBL CD200956 [ ACATTACCCGGAGACGTCCCAGCCCCAGGAGTGGCAGGCGCTGAAAGCGTATTCCCAGGACCACATAACTGACTATTCGGCGTACCAGGAGTAGCAGGATGCGAAGCAGCAAAAGAATGGTTTTGCTGTCTATTAACTGAACTTTCGGAGGGGAGTAAACTCTGCGAAGTAAGATGATGACCACTAGGTAGAATTGTATGATGAGATTGTGGGACAGGAGAAGGATGTGACGAAGGCATTGGTGTCGCTGTCCCAGCGTCGCTGCTTCTCATTAGCTGATTTATATTGGACGGAGACTGTGGAGGAACAGGTGATTGTGCTGGACTAGTTAGTGA ] [-] EMBL CD155665 [ CGAAGCAGCAAAAGAATGGTTTTGCTGTCTATTAACTGAACTTTCGGAGGGGAGTAAACTCTGCGAAGTAAGATGATGACCACTAGGTAGAATTGTATGATGAGATTGTGGGACAGGAGAAGGATGTGACGAAGGCATTGGTGTCGCTGTCCCAGCGTTGCTGCTTCTCATTAGCTGATTTATATTGGACGGAGACTGTGGAGGAACAGGTGATTGTGCTGGACTAGTTAGTGAACTTGTACCATGTGGAGGATATGGGTGAGGAATATGAAAAGAGGTTGGGGTGGGAACGTGTATTGAAGCAGGTGATCTTATGGGCGCAGGAGACATTGAAGAACAAACAGAAGGTGGTGGTGTT] consensusID : consensus_10942#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 464 fasta sequence [ACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAGCTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTACTGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAGACGGCCCTTGCTCAACAGCAACTGGTAAAGACGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTGCCACATTGGAGTATTACTATAGTTAGCATATGGCTGACAGTGAGACTCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTTAGCTGGAACTACCCTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACAT] [-] EMBL CD200929 [ACGAGACATTATGTGTTCCTGTTCCTGCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTTGACGCTGATGAGCTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTACTGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAGACGGCCCTTGCTCAACAGCAACTGGTAAAGACGATGAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTGCCACATTGGAGTATTACTATAGTTAGCATATGGCTGACAGTGAGACTCATTGGGTTGCTGGTGGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTTAGCTGGAACTACCCTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10942#0 TAACAGCTGATCCATCAGTATTATCAAAACTCAAACGTTGTTGATCAACCGTATGTTCAG 60 consensus_10942#1 ------------------------------------------------------------ consensus_10942#0 TTTGGTAGGCTGAACCACTAAGTAGACTGACATTAATAACTGGTGCACATCGTTTGTCTT 120 consensus_10942#1 ------------------------------------------------------------ consensus_10942#0 TGGCGGCAAGACGACTAACAATGATAGGTGGTTCAAAACCAACTTCTTCTAGACCAGCCG 180 consensus_10942#1 ------------------------------------------------------------ consensus_10942#0 CTACAGATGGAGCCCGAGGTATGTCAGAAATTAATTGAGTATCTATTGAAGTTAATGAAG 240 consensus_10942#1 ------------------------------------------------------------ consensus_10942#0 ATGGAGTGACAACGTCCATTTGATGGTATGGATTCATTGATGACGGGTGATCACTACGTT 300 consensus_10942#1 ------------------------------------------------------------ consensus_10942#0 GAGAAACGTTGTTACGATAAACTTGCATAGTGTTAGAATGTACCATTTGTTGATTGCTAC 360 consensus_10942#1 ------------------------------------------------------------ consensus_10942#0 GACTTGTAGATATCATAGCCTGGTTATTTATCCCATAACTATTAGGCAAGGAATCAGGAA 420 consensus_10942#1 ------------------------------------------------------------ consensus_10942#0 CCATTTGAGGTTGGTGAACTAGTTCTGACATTTCTGGATAAGTTAATCGTGTGGCTTTAG 480 consensus_10942#1 ------------------------------------------------------------ consensus_10942#0 GTACAGAAGTGTTTTGAGCACCGGTATAATCCCCTTGGGTGGGAGGGTTAGCAGTGGAAA 540 consensus_10942#1 ------------------------------------------------------------ consensus_10942#0 TAAACTGACCAGGAGCATGTGGACTCATTGAAGGAATACCAGAAGTGACTGATGTCAGGA 600 consensus_10942#1 ------------------------------------------------------------ consensus_10942#0 TTCTCGACCCACTAGGTGAGACTGGATCTGGTCTTGTTTGCGACTGTTGATAAAACATTG 660 consensus_10942#1 ------------------------------------------------------------ consensus_10942#0 CCGGATGCTGAGCAGAAACCTGTTGTGAAAAATAAGCATGTCTCATTGACTGCTGCTGAT 720 consensus_10942#1 ------------------------------------------------------------ consensus_10942#0 GAGCTTGATTTTGAGATGATACTGAATGGTACGGATCGTGAACTGAAGCATGTTGCTGCC 780 consensus_10942#1 ------------------------------------------------------------ consensus_10942#0 ACATTGGAGTATTACTATAGTTAGCATATGGCTGACAGTGAGACTCATTGGGTTGCTGGT 840 consensus_10942#1 ------------------------------------------------------------ consensus_10942#0 GGACAAGGTTACTGCTAGATTGGTTCATAGACGTATAAACAAGTCCTGAGCTGGAACTAC 900 consensus_10942#1 ------------------------------------------------------------ consensus_10942#0 CTTGCTGTCCGCTAGTGGACTGGGAAAGAGAATGACGAGACATTATGTGTTCCTGTTCCT 960 consensus_10942#1 ----------------------------------ACGAGACATTATGTGTTCCTGTTCCT 26 ************************** consensus_10942#0 GCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTT 1020 consensus_10942#1 GCTGAGCAAGATGAAGTTGCTGTTGTTGCAAGAGCTGTTGATGATGTTGATGTTGAACTT 86 ************************************************************ consensus_10942#0 GACGCTGATGAACTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTAC 1080 consensus_10942#1 GACGCTGATGAGCTTGTTTAGCTAGAATTTCTTTAAGACGTTGACGTTCCAACTCGGTAC 146 *********** ************************************************ consensus_10942#0 TGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAG 1140 consensus_10942#1 TGGAATAGTTACCTTGTTGTGTATGAGTCTGCTGTTGAGAGCCAGTATAATTACCAACAG 206 ************************************************************ consensus_10942#0 ACGGCCCTTGCTCAACAGCAACTGGTAAAGACGATGAGACATGTTCATTAGATGAAGATT 1200 consensus_10942#1 ACGGCCCTTGCTCAACAGCAACTGGTAAAGACGATGAG-CTTGATTTTGAGATGA----T 261 ************************************** * ** * * ****** * consensus_10942#0 GTGGAAGCGTATTTATTGAATAAACTGACTGAGATATATCACCTTCTGATGTCATCCTAC 1260 consensus_10942#1 ACTGAATGGTACGGATCG------TGAACTGAAGCATGTTGCTGCC--ACATTGGAGTAT 313 *** *** ** * ***** ** * * * * * ** consensus_10942#0 TGACGTGCATTGCTGAACTACCCACAATAAAAACATTTCCTGGATTTGTCGGGGCAGAAT 1320 consensus_10942#1 TACTATA-GTTAGCATATGGCTGACAGTGAGA----CTCATTGGGTTGCTGGT---GGAC 365 * * ** * * *** * * * ** * * *** ** * * consensus_10942#0 AAGAAAGCACACCAACATTACCCGGAGACGTCCCAGCCCCAGGAGTGGCAGGCGCTGAAA 1380 consensus_10942#1 AAGGTTAC-TGCTAGATTGGTTCATAGACGTATAAAC------------AAGTCCTTAG- 411 *** * * * * * ****** * * * * ** * consensus_10942#0 ACGTATTCCCAGGACCACATAACTGACTATTCGGCGTACCAGGAGTAGCAGGATG-CGAA 1439 consensus_10942#1 --------CTGGAACTACCCTGCTGTCCGCT-AGTGGACTGGGA--AAGAGAATGACGAG 460 * * ** ** *** * * * * ** *** * ** *** *** consensus_10942#0 GCAGCAAAAGAATGGTTTTGCTGTCTATTAACTGAACTTTCGGAGGGGAGTAAACTCTGC 1499 consensus_10942#1 ACAT-------------------------------------------------------- 464 ** consensus_10942#0 GAAGTAAGATGATGACCACTAGGTAGAATTGTATGATGAGATTGTGGGACAGGAGAAGGA 1559 consensus_10942#1 ------------------------------------------------------------ consensus_10942#0 TGTGACGAAGGCATTGGTGTCGCTGTCCCAGCGTTGCTGCTTCTCATTAGCTGATTTATA 1619 consensus_10942#1 ------------------------------------------------------------ consensus_10942#0 TTGGACGGAGACTGTGGAGGAACAGGTGATTGTGCTGGACTAGTTAGTGAACTTGTACCA 1679 consensus_10942#1 ------------------------------------------------------------ consensus_10942#0 TGTGGAGGATATGGGTGAGGAATATGAAAAGAGGTTGGGGTGGGAACGTGTATTGAAGCA 1739 consensus_10942#1 ------------------------------------------------------------ consensus_10942#0 GGTGATCTTATGGGCGCAGGAGACATTGAAGAACAAACAGAAGGAAGGGGTGTT 1793 consensus_10942#1 ------------------------------------------------------ |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||