cluster # 10943

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Schistosoma mansoni
cluster # 10943 cluster # 10943 Sequences # 26 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10943#0 length = 2344 sequences # 20

consensus_10943#1 length = 544 sequences # 5
consensus_10943#2 length = 380 sequences # 1

consensusID : consensus_10943#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 20
consensus length = 2344
fasta sequence

                              [CCAACTAGGGCAAATCAGGAAATTATTATCACAAAATAATTACAACCAACAACAAAAGTAGAACAAACCAGTACACTATTCTCAATGTATTTAATTAATAAGCGAAACAAAGCAAAACAAAACAAAACCAGAATACAACAACAATTTAAAGTATAAATTACATTAGTTCCAGGATACAGGGTAAACAAGGGGGGGAAATAAGATGATGGATTCTTCACGGTAGTGGTAAAAAGAAAACCAACAACATTCACTACTATTCAAACTCACAATAATAAGTAATATTCTTACCATTTTGACCTATTTTAAGCAACACAGTGAACAGAAGACAAAAAGAAAGAGAGGGAGGGAAAGAACAAGGCATAGAAAGAGAGTAAGGATAAATGAATCCCTATTGATTACAATTATGGTGATGATGACGATTCATTAAAAGAGGTTGAGTTGGATATGCGTACCCGTGAGCGTAAACGCAAAATAACACTACTTGATGTAATTCAAAGAATCAAAATAGGTTGCTTTTTTTAATTATTCATCTAAAACGATAGGATCATATTGAATTAATGAAGAAAGCAAATGAAGCAAAAAGTAACCAACTGTGAAACTAATGTGGTGATTATAACAAACTAAGGACAGTAACAAAGAAAATACAAGCACCGTGTATGTATCTGTGTGTGTTCATAATTTGGCCCCGTCTAACTTTCTTATTTTCATACATAAAATCTATATCCAACTTTATATGTAATAGGGTTTATACTGCGTGTGAATAGAAGTTATACACACATATACACGATGCATTACACTAATATATAGGCCAGAAATTGTTGAAGTATTTCAAGGAAGCACTAATCATAACACATTTTAAAGGGATCCTCGCAAGAATAAATACCAGATTGAGATTGATGTAAATATAAATGAATGTTTTTTTTT-AAAAAAAATTGTTCTCCAACAATAAAAGTACATAAGAAGAGAGAGTAAGGCATTCAAAGAATTTCATGCTGCTAAGACTAAGAAAGTAT-TTGCTTGGAATAAACAAAACCAAA-ATAAGGGATTAAACTAGACCAGCAATCTAGGCACCAACCCATATCGATAATGCTCATATTATCATCATTAATATCAATGTAGTAAACTGGATACTTCTTTATGAATGTGACATAGATATTCTGTGTATGAAATCGAATTACTACTGCATCGATCCTCGACCATGAAACGTCGAAACCATAGTTCACTTTTATCTCCAGGACGTACAACCAATAACCGAGAATAATGCCAACAATTTTTACGAACTTTTCTCAGCAATGTACACAGATTACGTGAAATTTCGTTATCAAAATTACACAAATCATAGATTTTTTCTGATTCAAAATGTTCCGGATTTTGAACATTGAACACTGCTTGAATCCATTCCGATGAAATATTTGGACCGATCCACATGATAAGATAAATTCCATTATCCAATAAATAAGCTGCGTCCATTTGTAAACGATCATATGAACAGCGTATAGCAGCTGGAGGATAAGGTATATCACCTTCGAAATTCAGTGAAAGATCATGAATAGGATATAAGTGAGGATAAATATAACAATTGGATTGTTTAACGTCCATTTGGTTGACCAAAAACATTTGCCAACAACGATCATCAATTGTAATACCATCAGCAGGACTAAAGGCTTCAGTTTTCATAAGACATTGTATGTACAAAGGAAATACTTTCATATTTCGTGGTAATACTAATTCACTAGGATTCGAATTTACATCATTCGGACCACAAGCACAATGACGACGATAAGCAGCCAAGG-TGTTAGCAGCTCTTGTTGTTAAATCATCCATTACTTGTGAATGTGTACGGTTGAGTAGAGAACGCATTGAATATTTACTCAACCAATTCATATGTGCGTCTAATTCGACAAGACGAAATATATCAGGTATCATACTTGTCACTGGAATTGACAGATTATGAATACGTAGCCTTCGCTGTCCAGATACTGAGGTATAAAGACATGCAACTTGAATGAATACGAGTTCACCTTCTTGAAGTTTATCATCATGACGTAATTCCGCTGTGATCGCCATATCTGAACTAACACTAGCCAATTCAACATCAGTTGTATTAGGTAGGTAACAATTACCAAAGAATTCAACAGGTCTAATACCAGTGCTTGTTCGAACACGCATAACAGCGTTGAAAGCTTGTAGGTTGGTTAAAGTACGTTGGAGATCGGCCAAAAACTGATGACCTTGTAGGTCAGCCTGGAAACAGTTATATTTGAATAAACGACCAGATGTTATTCTGGGCACTTCGGCTAAAGAAGCAATATCAACAAATGAATTGGGAAAAAGAAAAAGATCT]

[+] EMBL CD148719             [CCAACTAGGGCAAATCAGGAAATTATTATCACAAAATAATTACAACCAACAACAAAAGTAGAACAAACCAGTACACTATTCTCAATGTATTTAATTAATAAGCGAAACAAAGCAAAACAAAACAAAACCAGAATACAACAACAATTTAAAGTATAAATTACATTAGTTCCAGGATACAGGGTAAACAAGGGGGGGAAATAAGATGATGGATTCTTCACGGTAGTGGTAAAAAGAAAACCAACAACATTCACTACTATTCAAACTCACAATAATAAGTAATATTCTTACCATTTTGACCTATTTTAAGCAACACAGTGAACAGAAGACAAAAAGAAAGAGAGGGAGGGAAAGAACAAGGCATAGAAAGAGAGTAAGGATAAATGAATCCCTATTGATTACAATTATGGTGATGATGACGATTCATTAAAAGAGGTTGAGTTGGATATGCGTACCCGTGAGCGTAAACGCANAATAACACTACTTGATGTAATTCANAGAATCAAAATAGGTTGCTTTTTTTAATTATTCATCTAAAACGATAGGATCATATTGAATTAATGAAGAAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD200953             [                                                                                                                                                                                                                                                                                                                                                         aGAAACAACAAGGCTTAAAAAGAGAGTGAGGATAAATGAATCCCTATTGATTACAATTATGGTGATGATGACGATTCATTAAAAGAGGTTGAGTTGGATATGCGTACCCGTGAGCGTAAACGCAAAATAACACTACTTGATGTAATTCAAAGAATCAAAATAGGTGGCTTTTTTTAATTATTCATCTAAAACGATAGGATCATATTGAATTAATGAAGAAAGCAAATGAAGCAAAAAGTAACCAACTGTGAAACTAATGTGGTGATTATAACAAACTAAGGACAGTAACAAAGAAAATACAAGCACCGTGTATGTATCTGTGTGTGTTCACAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD071565             [                                                                                                                                                                                                                                                                                                                                                                    GGCATAGAAAGAGAGTAAGGATAAATGAATCCCTATTGATTACAATTATGGTGATGATGACGATTCATTAAAAGAGGTTGAGTTGGATATGCGTACCCGTGAGCGTAAACGCAAAATAACACTACTTGATGTAATTCAAAGAATCAAAATAGGTTGCTTTTTTTAATTATTCATCTAAAACGACAGGATCATATTGAATTAATGAAGAAAGCAAATGAAGCAAAAAGTAACCAACTGTGAAACTAATGTGGTGATTATAACAAACTAAGGACAGTAACAAAGAAAATACAAGCACCGTGTATGTATCTGTGTGTGTTCATAATTTGGCCCCGTCTAACTTTCTTATTTTCATACATAAAATCTATATCCAACTTTATATGTAATAGGGTTTATACTGCGTGTGAATAGAAGTTATACACACATATACACGATGCATTACACTAATATATAGGCCAGAAATTGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL BG930468             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TTCAAAGAATCAAAATAGGTTGCTTTTTTTAATTATTCATCTAAACCGATAGGATCATATTGAATTAATGAAGAAAGCAAATGAAGCAAAAAGTAACCANCTGTGAAACTAATGTGGTGATTATAACAAACTAAGGACAGTAACAAAGAAAATACAAGCNCCGTGTATGTATCTGTGTGTGTTCATAATTTGGCCCCGTCTAACTTTCTTATTTTCATACATAAAATCTATATCCAACTTTATATGTAATAGGGTTTATACTGCGTGTGAATAGAAGTTATACACACATATACACGATGCATTACACTAATATATAGGCCAGAAATTGTTGAAGTATTTCAAGGAAGCACTAATCATAACACATTTTAAAGGGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD167547             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AATTTGCCCCCGTCTAACTTTCTGATTTTCATACATAAAATCTATATCCAACTTTATATGTAATAGGGTTTATACTGCGTGTGAATAGAAGTTATACACACATATACACGATGCATTACACTAATATATAGGCCAGAAATTGTTGAAGTATTTCAAGGAAGCACTAATCATAACACATTTTAAAGGGATCCTCGCAAGAATAAATACCAGATTGAGATTGATGTAAATATAAATGAATGTTTTTTTTTAAAAAAAAATTGTTCTCCAACAATCAAAGTACATAAGAAGAGAGAGTAAGGCATTCAAAGAATTTCATGCTGCTAAGACTAAGAAAGTAT TTGCTTGGAATAAACAAAACCAAATAT AGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD167543             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AACTTTCTGATTGTCATACATAAAATCTATATCCAACTTTATATGTAATAGGGTTTATACTGCGTGTGAATAGAAGTTATACACACATATACACGATGCATTACACTAATATATAGGCCAGAAATTGTTGAAGTATTTCAAGGAAGCACTAATCATAACACATTTTAAAGGGATCCTCGCAAGAATAAATACCAGATTGAGATTGATGTAAATATAAATGAATGTTTTTTTTTAAAAAAAAATTGTTCTCCAACAATAAAAGTACATAAGAAGAGAGAGTAAGGCATTCAAAGAATTTCATGCTGCTAAGACTAAGAAAGTATCTTGCTTGGAATAAACCAAACCCAA ATAAGGGATTAAACTAGACCAGCAATCTAGGCACC ACCCATATCGATAATGCTCATATTATCATCATTAATATCAATGTAGTAAACTGGATACTTCTTTATGAATGTGACATAGATATTCTGTGTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD167217             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   atCAT AAATCTATATCCAACTTTATATGNTATAGGGTTTATACTGCGTGTGAATAGAAGTTATACACACATAT CACGATGCATTGCACTAATATATAGGCCAGAAATTGTTGAAGTATTTCAAGGAAGCACTAATCATAACACATTTTAAAGGGATCCTCGCAAGAATAAATACCAGATTGAGATTGATGTAAATATAAATGAATGTTTTTTTTA AAAAAAAATTGTTCTCCAACAATAAAAGTACATAAGAAGAAAGAGTAAGGCATTCAAAGAATTTCATGCTGCTAAGACTAAGAAAGTAT TTGCTTGGAATAAACAAAACCAAA ATAAGGGATTAAACTAGACCAGCAATCTAGGCACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD096481             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTATACACACATATACACGATGCATTACACTAATATATAGGCCAGAAATTGTTGAAGTATTTCAAGGAAGCACTAATCATAACACATTTTAAAGGGATCCTCGCAAGAATAAATACCAGATTGAGATTGATGTAAATATAAATGAATGTTTTTTTT   AAAAAAATTGTTCTCCAACAATAAAAGTACATAAGAAGAGAGAGTAAGGCATTCAAAGAATTTCATGCTGCTAAGACTAAGAAAGTAT TTGCTTGGAATAAACAAAACCAAA ATAAGGGATTAAACTAGACCAGCAATCTAGGCACCAACCCATATCGATAATGCTCATATTATCATCATTAATATCAATGTAGTAAACTGGATACTTCTTTATGAATGTGACATAGATATTCTGTGTATGAAATCGAATTACTACTGCATCGATCCTCGACCATGAAACGTCGAAACCATAGTTCACTTTTATCTCCAGGACGTACAACCAATAACCGAGAATAATGCCAACAATTTTTACGAACTTTTCTCAGCAATGTACACAGATTACGTGAAATTTCGTTATCAAAATTACACANATCATAGATTTTTTCTGATTCAna                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD096668             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTATACACACATATACACGATGCATTACACTAATATATAGGCCAGAAATTGTTGAAGTATTTCAAGGAAGCACTAATCATAACACATTTTAAAGGGATCCTCGCAAGAATAAATACCAGATTGAGATTGATGTAAATATAAATGAATG TTTTTTTT AAAAAAAATTGTTCTCCAACAATAAAAGTACATAAGAAGAGAGAGTAAGGCATTCAAAGAATTTCATGCTGCTAAGACTAAGAAAGTAT TTGCTTGGAATAAACAAAACCAAA ATAAGGGATTAAACTAGACCAGCAATCTAGGCACCAACCCATATCGATAATGCTCATATTATCATCATTAATATCAATGTAATAAACTGGATACTTCTTTATGAATGTGACATAGATATTCTGTGTATGAAATCGAATTACTACTGCATCGATCCTCGACCATGAAACGTCGAAACCATAGTTCACTTTTATCTCCAGGACGTACAACCAATAACCGAGAATAATGCCAACAATTTTTACGAACTTTTCTCAGCAATGTACACAGATTACGTGAAATTTCGTTATCAAAA TACACANATCATAGATTTTTTCTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD146931             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TAAAGGGATCCTCGCAAGAATAAATACCAGATTGAGATTGATGTAAATATAAATGAATG TTTTTTTT AAAAAAAATTGTTCTCCACCAATAAAAGTACATAAGAAGAGAGAGTAAGGCATTCAAAGAATTTCATGCTGCTAAGACTAAGAAAGTAT TTGCTTGGAATAAACAAAACCAAA ATAAGGGATTAAACTAGACCAGCAATCTAGGCACCAACCCATATCGATAATGCTCATATTATCATCATTAATATCAATGTAGTAAACTGGATACTTCTTTATGAATGTGACATAGATATTCTGTGTATGAAATCGAATTACTACTGCATCGATCCTCGACCATGAAACGTCGAAACCATAGTTCACTTTTATCTCCAGGACGTACAACCAATAACCGAGAATAATGCCAACAATTTTTACGAACTTTTCTCAGCAATGTACACAGATTACGTGAAATTTCGTTATCAAAATTACACAAATCATAGATTTTTTCTGATTCAAAATGTTCCGGATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD064299             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CAAAGAATTTCATGCTGCTAAGACTAAGAAAGTAT TTGCTTTGAATAAACAAAACCA     AAGGGATTAAACTAGACCAGCAATCTAGGCACCAACCCACATCGATAATGCTCATATTATCATCATTAATATCAATGTAGTAAACTGGATACTTCTTTATGAATATGACATAGATATTCTGTGTATGAAATTGAATTACTACTGCATCGATCCTCGCCCCAGGATCGTCGCAACCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD096321             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              A ATAAGGGATTAAACTAGACCAGCAATCTAGGCACCAACCCATATCGATAATGCTCATATTATCATCATTAATATCAATGTAGTAAACTGGATACTTCTTTATGAATGTGACATAGATATTCTGTGTATGAAATCGAATTACTACTGCATCGATCCTCGACCATGAAACGTCGAAACCATAGTTCACTTTTATCTCCAGGACGTACAACCAATAACCGAGAATAATGCCAACAATTTTTACGAACTTTTCTCAGCAATGTACACAGATTACGTGAAATTTCGTTATCAAAATTACACAAATCATAGATTTTTTCTGATTCAAAATGTTCCGGATTTTGAACATTGAACACTGCTTGAATCCATTCCGATGAAATATTTGGACCGATCCACATGATAAGATAAATTCCATTATCTAATAAATAAGCTGCGTCCATTTGTAAACGATCATATGAACAGCGTATAGCAGCTGGAGGATAAGGTATATCACCTTCGAAATTCAGTGAAAGATCATGAATAGGATATAAGTGAGGATAAATATAACAATTGGATTGTTTAACGTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD096355             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATAAGGGATTAAACTAGACCAGCAATCTAGGCACCAACCCATATCGATAATGCTCATATTATCATCATTAATATCAATGTAGTAAACTGGATACTTCTTTATGAATGTGACATAGATATTCTGTGTATGAAATCGAATTACTACTGCATCGATCCTCGACCATGAAACGTCGAAACCATAGTTCACTTTTATCTCCAGGACGTACAACCAATAACCGAGAATAATGCCAACAATTTTTACGAACTTTTCTCAGCAATGTACACAGATTACGTGAAATTTCGTTATCAAAATTACACAAATCATAGATTTTTTCTGATTCAAAATGTTCCGGATTTTGAACATTGAACACTGCTTGAATCCATTCCGATGAAATATTTGGACCGATCCACATGATAAGATAAATTCCATTATCCAATAAATAAGCTGCGTCCATTTGTAAACGATCATATGAACAGCGTATAGCAGCTGGAGGATAAGGTATATCACCTTCGAAATTCAGTGAAAGATCATGAATAGGATATAAGTGAGGATAAGTATAACAATTGGATTGTTTAACGTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD146731             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACCAACCCACATCGATAATGCTCATATTATCATCATTAATATCAATGTAGTAAACTGGATACTTCTTTATGAATATGACATAGATATTCTGTGTATGAAATTGAATTACTACTGCATCGATCCTCGACCATGAAACGTCGAAACCATAGTTCACTTTTATCTCCAGGACGTACAACCAATAACCGAGAATAATGCCAACGATTTTTACGAACTTTTCTCAGCAATGTACACAGATTACGTGAAATTTCGTTATCAAAATTACACAAGTCATAGATTTTTTCTGATTCAAAATGTTCCGGATTTTGAACATTGAACACTGCTTGAATCCATTCTGATGAAATATTTGGACCGATCCACATGATAAGATAAATTCCATTATCCAATAAATAAGCTGCGTCCATTTGTAAACGATCATATGAACAGCGTATAGCAGCTGGAGGATAAGGTATATCACCTTCGAAATTCAGTGAAAGATCATGAATAGGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD128224             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            cacgGAAC TTTCTCAGC ATGTAC CAGATTACGTGAAATTTCGTTATCAAAA TACACAAGTCATAGATTTTTTCTGATTCAAAATGTTCCGGATTTTGAACATTGAACACTGCTTGAATCCATTCCGATGAAATATTTGGACCGATCCACATGATAAGATAAATTCCATTATCCAATAAATAAGCTGCGTCCATTTGTAAACGATCATATGAACAGCGTATAGCAGCTGGAGGATAAGGTATATCACCTTCGAAATTCAGTGAAAGATCATGAATAGGATATAAGTGAGGATAAATATAGCAATTGGATTGTTTAACGTCCATTTGGTTGACCAAAAACATTTGCCAACAACGATCATCAATTGTAATACCATCAGCAGGACTAAAGGCTTCAGTTTTCATAAGACATTGTATGTACAAAGGAAATACTTTCATATTTCGTGGTAATACTAATTCACTAGGATTCGAATTTACATCATTCGGACCACAAGCACAATGACGACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD197831             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTATAGCAGCTGGAGGATAAGGTATATCACCTTCGAAATTCAGTGAAAGATCATGAATAGGATATAAGTGAGGATAAATATAACAATTGGATTGTTTAACGTCCATTTGGTTGACCAAAAACATTTGCCAACAACGATCATCAATTGTAATACCATCAGCAGGACTAAAGGCTTCAGTTTTCATAAGACATTGTATGTACAAGGGAAATACTTTCATATTTTGTGGTAATACTAATTCACTAGGATTCGAATTTACATCATTCGGACCGCAAGCACAATGACGACGATAAGCAGCCAAGG TGTTAGCAGCTCTTGTTGTTAAATCATCCATTACTTGTGAATGTGTACGGTTGAGTAGAGAACGCATTGAATATTTACTCAACCAATTCATATGTGCGTCTAATTCGACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD128424             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGT ATACTAATTCACTAGGATTCGAATTTACATCATTCGGACCACAAGCACAATGACGACGAGTAGCAGCCAAGGATGTTAGCAGCTCTTG TGTTAAATCATCCATTACTTGTGAATGTGTACGGTTGAGTAGAGAACGCATTGTATATTTACTCAACCAATTCATATGTGCATCTAATTCGACAAGACGAAATATATCAGGTATCATACTTGTCACTGGAATTGACAGATTATGAATACGTAGCCTTCGCTGTCCAGATACTGAGGTATAAAGACATGCAACTTGAATGAATACGAGTTCACCCTCTTGAAGTTTATCATCATGACGTAATTCCGCTGTGATCGCCATATCTGAACTAACACTAGCCAATTCAACATCAGTTGTATTAGGTAGGTAACAATTACCA                                                                                                                                                                                                                           ]
[-] EMBL CD128383             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTACATCATTCGGACCACAAGCACAATGACGACGATAAGCAGCCAAGG TGTTAGCAGCTCTTGTTGTTAAATCATCCATTACTTGTGAATGTGTACGGTTGAGTAGAGAACGCATTGAATATTTACTCAACCAATTCATATGTGCATCTAATTCGACAAGACGAAATATATCAGGTATCATACTTGTCACTGGAATTGACAGATTA                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD161408             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCATTACTTGTGAATGTGTACGGTTGAGTAGAGAACGCATTGAATATTTACTCAACCAATTCATATGTGCGTCTAATTCGACAAGACGAAATATATCAGGTATCATACTTGTCACTGGAATTGACAGATTATGAATACGTAGCCTTCGTTGTCCAGATACTGAAGTACAAAGACATGCAACTTGAATGAATACGAGCTCACCTTCTTGAAGTTTATCATCATGACGTAATTCCGCTGTGATCGCCATATCTGAACTAACACTAGCCAATTCAACATCAGTTGTATTAGGTAGGTAACAATTACCAAAGAATTCAACAGGTCTAATACCAGTGCTTGTTCGAACACGCATAACAGCGTTGAAAGCTTGTAGGTTGGTTAAAGTACGTTGGAGATCGGCCAAAAACTGATGACCTTGTAGGTCAGCCTGGAAACAGTTATATTTGAATAAACGACCAGATGTTATTCTGGGCACTTCGGCTAAAGAAGCAATATCAACAAATGAATTGGGAAAAAGAAAAAGATCT]
[-] EMBL CD114647             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAGACGAAATATATCAGGTATCATACTTGTCACTGGAATTGACAGATTATGAATACGTAGCCTTCGCTGTCCAGATACTGAGGTATAAAGACATGCAACTTGAATGAATACGAGTTCACCTTCTTGAAGTTTATCATCATGACGTAATTCCGCTGTGATCGTCATATCTGAACTAACACTAGCCAATTCAACATCAGTTGTATTAGGTAGGTAACAATTACCAAAGAATTCAACAGGTCTAATACCAGTACTTGTTCGAACACGCATAACAGCGTTGAAAGCTTGTAGGTTAGTCAAAGTACGTTGGAGATCGGCCAAAAATTGATGACCTTGTAGGTCAGCCTGGAAACAGTTATATTTGAATAAACGACCAGATGTTATTCTGGGCACTTCAGCTTAAGAAGCAATATCAACAAATGAATTGGGAAAAAG          ]




>consensus_10943#0
CCAACTAGGGCAAATCAGGAAATTATTATCACAAAATAATTACAACCAACAACAAAAGTA
GAACAAACCAGTACACTATTCTCAATGTATTTAATTAATAAGCGAAACAAAGCAAAACAA
AACAAAACCAGAATACAACAACAATTTAAAGTATAAATTACATTAGTTCCAGGATACAGG
GTAAACAAGGGGGGGAAATAAGATGATGGATTCTTCACGGTAGTGGTAAAAAGAAAACCA
ACAACATTCACTACTATTCAAACTCACAATAATAAGTAATATTCTTACCATTTTGACCTA
TTTTAAGCAACACAGTGAACAGAAGACAAAAAGAAAGAGAGGGAGGGAAAGAACAAGGCA
TAGAAAGAGAGTAAGGATAAATGAATCCCTATTGATTACAATTATGGTGATGATGACGAT
TCATTAAAAGAGGTTGAGTTGGATATGCGTACCCGTGAGCGTAAACGCAAAATAACACTA
CTTGATGTAATTCAAAGAATCAAAATAGGTTGCTTTTTTTAATTATTCATCTAAAACGAT
AGGATCATATTGAATTAATGAAGAAAGCAAATGAAGCAAAAAGTAACCAACTGTGAAACT
AATGTGGTGATTATAACAAACTAAGGACAGTAACAAAGAAAATACAAGCACCGTGTATGT
ATCTGTGTGTGTTCATAATTTGGCCCCGTCTAACTTTCTTATTTTCATACATAAAATCTA
TATCCAACTTTATATGTAATAGGGTTTATACTGCGTGTGAATAGAAGTTATACACACATA
TACACGATGCATTACACTAATATATAGGCCAGAAATTGTTGAAGTATTTCAAGGAAGCAC
TAATCATAACACATTTTAAAGGGATCCTCGCAAGAATAAATACCAGATTGAGATTGATGT
AAATATAAATGAATGTTTTTTTTTAAAAAAAATTGTTCTCCAACAATAAAAGTACATAAG
AAGAGAGAGTAAGGCATTCAAAGAATTTCATGCTGCTAAGACTAAGAAAGTATTTGCTTG
GAATAAACAAAACCAAAATAAGGGATTAAACTAGACCAGCAATCTAGGCACCAACCCATA
TCGATAATGCTCATATTATCATCATTAATATCAATGTAGTAAACTGGATACTTCTTTATG
AATGTGACATAGATATTCTGTGTATGAAATCGAATTACTACTGCATCGATCCTCGACCAT
GAAACGTCGAAACCATAGTTCACTTTTATCTCCAGGACGTACAACCAATAACCGAGAATA
ATGCCAACAATTTTTACGAACTTTTCTCAGCAATGTACACAGATTACGTGAAATTTCGTT
ATCAAAATTACACAAATCATAGATTTTTTCTGATTCAAAATGTTCCGGATTTTGAACATT
GAACACTGCTTGAATCCATTCCGATGAAATATTTGGACCGATCCACATGATAAGATAAAT
TCCATTATCCAATAAATAAGCTGCGTCCATTTGTAAACGATCATATGAACAGCGTATAGC
AGCTGGAGGATAAGGTATATCACCTTCGAAATTCAGTGAAAGATCATGAATAGGATATAA
GTGAGGATAAATATAACAATTGGATTGTTTAACGTCCATTTGGTTGACCAAAAACATTTG
CCAACAACGATCATCAATTGTAATACCATCAGCAGGACTAAAGGCTTCAGTTTTCATAAG
ACATTGTATGTACAAAGGAAATACTTTCATATTTCGTGGTAATACTAATTCACTAGGATT
CGAATTTACATCATTCGGACCACAAGCACAATGACGACGATAAGCAGCCAAGGTGTTAGC
AGCTCTTGTTGTTAAATCATCCATTACTTGTGAATGTGTACGGTTGAGTAGAGAACGCAT
TGAATATTTACTCAACCAATTCATATGTGCGTCTAATTCGACAAGACGAAATATATCAGG
TATCATACTTGTCACTGGAATTGACAGATTATGAATACGTAGCCTTCGCTGTCCAGATAC
TGAGGTATAAAGACATGCAACTTGAATGAATACGAGTTCACCTTCTTGAAGTTTATCATC
ATGACGTAATTCCGCTGTGATCGCCATATCTGAACTAACACTAGCCAATTCAACATCAGT
TGTATTAGGTAGGTAACAATTACCAAAGAATTCAACAGGTCTAATACCAGTGCTTGTTCG
AACACGCATAACAGCGTTGAAAGCTTGTAGGTTGGTTAAAGTACGTTGGAGATCGGCCAA
AAACTGATGACCTTGTAGGTCAGCCTGGAAACAGTTATATTTGAATAAACGACCAGATGT
TATTCTGGGCACTTCGGCTAAAGAAGCAATATCAACAAATGAATTGGGAAAAAGAAAAAG
ATCT

consensusID : consensus_10943#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 544
fasta sequence

                              [ATTACATTAGTTTCAGGATACAGGGTAAACAGGGGGGAAAAATAAGATGGTGGATTCTTCACGATAGTGGTAAAAAGAAAACCAACAAAATTCACTAATATTCAAACTCACAATAATAAGTAATATTATTATCATTTTGGTTTATTTTAAGCAATACAAAACTTATAGCTGTTGTCCACAGTGAATAGGAGACAAAAAGAAAGAGAGGGAGGGAAAGAATAAGGCATAGAAAGAGAGTAAGGATAAATGAATCCCTATTGATTACAGTTATGGTGATGACAATAATGATGACGATTCATTAAAAGAGGTTGAGTTGGATATGCGTACCCGTGAGCGTAAACGCAAAATAACACTACTTGATGTAATTCAAAGAATCAAAATAGGTTGCTTTTTTTTAATTATTCATCTAAAACGATAGGATCATATTGAATTAATGAAGAAAGCAAATGAAGCAAAAAGTAACCAACTGTGAAACCAATGTGGTGATTATAACAAATTAAGGACAGTAACAAAGAAAATACAAGCACCGTGTATGTATGCGTGT]

[-] EMBL AI976132             [ATTACATTAGTTTCAGGATACAGGGTAAACAGGGGGGAAAAATAAGATGGTGGATTCTTCACGATAGTGGTAAAAAGAAAACCAACAAAATTCACTAATATTCAAACTCACAATAATAAGTAATATTATTATCATTTTGGTTTATTTTAAGCAATACAAAACTTATAGCTGTTGTCCACAGTGAATAGGAGACAAAAAGAAAGAGAGGGAGGGAAAGAATAAGGCATAGAAAGAGAGTAAGGATAAATGAATCCCTATTGATTACAGTTATGGTGATGACAATAATGATGACGATTCATTAAAAGAGGTTGAGTTGGATATGCGTACCCGTGAGCGTAAACGCAAAATAACACTACTTGATGTAATTCAAAGAATCAAAATAGGTTGCTTTTTTTTAATTATTCATCTAAAACGATAGGATCATATTGAATTAATGAAGAAAGCAAATGAAGCAAAAAGTAACCAACTGTGAAACCAATGTGGTGATTATAACAAATTAAGGACAGTAACAAAGAAAATACAAGCACCGTGTATGTATGCGTGT]
[-] EMBL AI976284             [                                                    GATTCTTCACGATAGTGGTAAAAAGAAAACCAACAAAATTCACTAATATTCAAACTCACAATAATAAGTAATATTATTATCATTTTGGTTTATTTTAAGCAATACAAAACTTATAGCTGTTGTCCACAGTGAATAGGAGACAAAAAGAAAGAGAGGGAGGGAAAGAATAAGGCATAGAAAGAGAGTAAGGATAAATGAATCCCTATTGATTACAGTTATGGTGATGACAATAATGATGACGATTCATTAAAAGAGGTTGAGTTGGATATGCGTACCCGTGAGCGTAAACGCAAAATAACACTACTTGATGTAATTCAAAGAATCAAAATAGGTTGCTTTTTTTTAATTATTCATCTAAAACGATAGGATCATATTGAATTAATGAAGAAAGCAAATGAAGCAAAAAGTAACCAACTGTGAAACCAATGTGGTGATTATAACAAATTAAGGACAGTAACAAAGAAAATACAAGCACCGTGTATGTATGCGTGT]
[-] EMBL AI975119             [                                                                                                                ATAATAAGTAATATTATTATCATTTTGGTTTATTTTAAGCAATACAAAACTTATAGCTGTTGTCCACAGTGAATAGGAGACAAAAAGAAAGAGAGGGAGGGAAAGAATAAGGCATAGAAAGAGAGTAAGGATAAATGAATCCCTATTGATTACAGTTATGGTGATGACAATAATGATGACGATTCATTAAAAGAGGTTGAGTTGGATATGCGTACCCGTGAGCGTAAACGCAAAATAACACTACTTGATGTAATTCAAAGAATCAAAATAGGTTGCTTTTTTTTAATTATTCATCTAAAACGATAGGATCATATTGAATTAATGAAGAAAGCAAATGAAGCAAAAAGTAACCAACTGTGAAACCAATGTGGTGATTATAACAAATTAAGGACAGTAACAAAGAAAATACAAGCACCGTGTATGTATGCGTGT]
[-] EMBL AA756920             [                                                                                                                   ATAAGTAATATTATTATCATTTTGGTTTATTTTAAGCAATACAAAACTTATAGCTGAAGTCCACAGAGAATANGAGACAAAAAGAAAGAGAGGGAGGGAAAGAATAAGGCATAGAAAGAGAGTAAGGATAAATGAATCCCTATTGATTACAGTTATGGTGATGACAATAATGATGACGATTCATTAAAAGAGGTTGAGTTGGATATGCGATCCCGTGA CGTAAACGCAAAATAACACTACTTGATGTAATTCAAAGAATCAAAATANGTTGCTTTTTTTTAATT                                                                                                                                                ]
[-] EMBL AI976718             [                                                                                                                                                              AAACTTATAGCTGTTGTCCACAGTGAATAGGAGACAAAAAGAAAGAGAGGGAGGGAAAGAATAAGGCATAGAAAGAGAGTAAGGATAAATGAATCCCTATTGATTACAGTTATGGTGATGACAATAATGATGACGATTCATTAAAAGAGGTTGAGTTGGATATGCGTACCCGTGAGCGTAAACGCAAAATAACACTACTTGATGTAATTCAAAGAATCAAAATAGGTTGCTTTTTTTTAATTATTCATCTAAAACGATAGGATCATATTGAATTAATGAAGAAAGCAAATGAAGCAAAAAGTAACCAACTGTGAAACCAATGTGGTGATTATAACAAATTAAGGACAGTAACAAAGAAAATACAAGCACCGTGTATGTATGCGTGT]




>consensus_10943#1
ATTACATTAGTTTCAGGATACAGGGTAAACAGGGGGGAAAAATAAGATGGTGGATTCTTC
ACGATAGTGGTAAAAAGAAAACCAACAAAATTCACTAATATTCAAACTCACAATAATAAG
TAATATTATTATCATTTTGGTTTATTTTAAGCAATACAAAACTTATAGCTGTTGTCCACA
GTGAATAGGAGACAAAAAGAAAGAGAGGGAGGGAAAGAATAAGGCATAGAAAGAGAGTAA
GGATAAATGAATCCCTATTGATTACAGTTATGGTGATGACAATAATGATGACGATTCATT
AAAAGAGGTTGAGTTGGATATGCGTACCCGTGAGCGTAAACGCAAAATAACACTACTTGA
TGTAATTCAAAGAATCAAAATAGGTTGCTTTTTTTTAATTATTCATCTAAAACGATAGGA
TCATATTGAATTAATGAAGAAAGCAAATGAAGCAAAAAGTAACCAACTGTGAAACCAATG
TGGTGATTATAACAAATTAAGGACAGTAACAAAGAAAATACAAGCACCGTGTATGTATGC
GTGT

consensusID : consensus_10943#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 380
fasta sequence

                              [TACATAAAATCTATATCCAACTTTATATGTAATAGGGTTTATACTGCGTGTGAATAGAAGTTATACACACATATACACGATGCATTGCACTAATATATAGGCCAGAAATTGTTGAGGTATTTCAAGGAAGCACTAATCATAACACATTTTAAAGGGATCCTCGCAAGAATAAATACCAGATTGAGATTGATGTAAATATAAATGAATGTTTTTTTTAAAAAAAATTGTTCTCCAACAATAAAAGTACACAAGAAGAGAGAGTAAGGCATTCAATAGAATTTCATGCTGCTAAGACTAAGAAAGTATTTGCTTGGAATAAACAAAACCAAAATAAGGGATTAAACTAGACCACATCTAGCACCAACCCAAGTTCCGTGAGC]

[-] EMBL CD167334             [TACATAAAATCTATATCCAACTTTATATGTAATAGGGTTTATACTGCGTGTGAATAGAAGTTATACACACATATACACGATGCATTGCACTAATATATAGGCCAGAAATTGTTGAGGTATTTCAAGGAAGCACTAATCATAACACATTTTAAAGGGATCCTCGCAAGAATAAATACCAGATTGAGATTGATGTAAATATAAATGAATGTTTTTTTTAAAAAAAATTGTTCTCCAACAATAAAAGTACACAAGAAGAGAGAGTAAGGCATTCAATAGAATTTCATGCTGCTAAGACTAAGAAAGTATTTGCTTGGAATAAACAAAACCAAAATAAGGGATTAAACTAGACCACATCTAGCACCAACCCAAGTTCCGTGAGC]




>consensus_10943#2
TACATAAAATCTATATCCAACTTTATATGTAATAGGGTTTATACTGCGTGTGAATAGAAG
TTATACACACATATACACGATGCATTGCACTAATATATAGGCCAGAAATTGTTGAGGTAT
TTCAAGGAAGCACTAATCATAACACATTTTAAAGGGATCCTCGCAAGAATAAATACCAGA
TTGAGATTGATGTAAATATAAATGAATGTTTTTTTTAAAAAAAATTGTTCTCCAACAATA
AAAGTACACAAGAAGAGAGAGTAAGGCATTCAATAGAATTTCATGCTGCTAAGACTAAGA
AAGTATTTGCTTGGAATAAACAAAACCAAAATAAGGGATTAAACTAGACCACATCTAGCA
CCAACCCAAGTTCCGTGAGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10943#0      CCAACTAGGGCAAATCAGGAAATTATTATCACAAAATAATTACAACCAACAACAAAAGTA 60
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      GAACAAACCAGTACACTATTCTCAATGTATTTAATTAATAAGCGAAACAAAGCAAAACAA 120
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      AACAAAACCAGAATACAACAACAATTTAAAGTATAAATTACATTAGTTCCAGGATACAGG 180
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      GTAAACAAGGGGGGGAAATAAGATGATGGATTCTTCACGGTAGTGGTAAAAAGAAAACCA 240
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      ACAACATTCACTACTATTCAAACTCACAATAATAAGTAATATTCTTACCATTTTGACCTA 300
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      TTTTAAGCAACACAGTGAACAGAAGACAAAAAGAAAGAGAGGGAGGGAAAGAACAAGGCA 360
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      TAGAAAGAGAGTAAGGATAAATGAATCCCTATTGATTACAATTATGGTGATGATGACGAT 420
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      TCATTAAAAGAGGTTGAGTTGGATATGCGTACCCGTGAGCGTAAACGCAAAATAACACTA 480
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      CTTGATGTAATTCAAAGAATCAAAATAGGTTGCTTTTTTTAATTATTCATCTAAAACGAT 540
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      AGGATCATATTGAATTAATGAAGAAAGCAAATGAAGCAAAAAGTAACCAACTGTGAAACT 600
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      AATGTGGTGATTATAACAAACTAAGGACAGTAACAAAGAAAATACAAGCACCGTGTATGT 660
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      -----------------ATTACATTAGTTTCAGGATACAGGGTAAACAGGGGGGAAAAAT 43
                                                                                   

consensus_10943#0      ATCTGTGTGTGTTCATAATTTGGCCCCGTCTAACTTTCTTATTTTCATACA-TAAAATCT 719
consensus_10943#2      -----------------------------------------------TACA-TAAAATCT 12
consensus_10943#1      AAGATGGTGGATTCTTCACGATAGTGGTAAAAAGAAAACCAACAAAATTCACTAATATTC 103
                                                                      * ** *** **  

consensus_10943#0      ATATCCAACTTTATATGTAATAGGGTTTATACTGCGTGTGAATAGAAGTTATACACA-CA 778
consensus_10943#2      ATATCCAACTTTATATGTAATAGGGTTTATACTGCGTGTGAATAGAAGTTATACACA-CA 71
consensus_10943#1      AAACTCACAATAATAAGTAATATTATTATCATTTTGGTTTATTTTAAGCAATACAAAACT 163
                       * *  **   * *** ******   **   * *  *  * * *  ***  ***** * * 

consensus_10943#0      TATACACGATGCATTACACTAATATATAGGCCAGAAATTGTTGAAGTATTTCAAGGA--- 835
consensus_10943#2      TATACACGATGCATTGCACTAATATATAGGCCAGAAATTGTTGAGGTATTTCAAGGA--- 128
consensus_10943#1      TATAGCTGTTGT-CCACAGTGAATAGGAGACAAAAAGAAAGAGAGGGAGGGAAAGAATAA 222
                       ****   * **     ** * *     ** * * **      ** * *    *** *   

consensus_10943#0      AGCACTAATCATAACACATTTTAAAGGGATCCTCGC-AAGAATAAATACCAGATTGAGAT 894
consensus_10943#2      AGCACTAATCATAACACATTTTAAAGGGATCCTCGC-AAGAATAAATACCAGATTGAGAT 187
consensus_10943#1      GGCATAGAAAGAGAGTAAGGATAAATGAATCCCTATTGATTACAGTTATGGTGATGACAA 282
                        ***   *     *   *   **** * ****      *  * *  **      *** * 

consensus_10943#0      TGATG-TAAATATAAATGAATGTTTTTTTTTAAAAAAAATTGTTCTCCAACAATAAAAGT 953
consensus_10943#2      TGATG-TAAATATAAATGAATGTTTTTTTT-AAAAAAAATTGTTCTCCAACAATAAAAGT 245
consensus_10943#1      TAATGATGACGATTCATTAAAAGAGGTTGA-GTTGGATATGCGTACCCGTGAGCGTAAAC 341
                       * *** * *  **  ** **      **        * **   *  **   *    **  

consensus_10943#0      ACATAAGAAGAGAGAGTAAGGCATTCAA-AGAATTTCATGCTGCTAAGACTAAGAAAGTA 1012
consensus_10943#2      ACACAAGAAGAGAGAGTAAGGCATTCAATAGAATTTCATGCTGCTAAGACTAAGAAAGTA 305
consensus_10943#1      GCAAAATAACACTACTTGATGTAATTCAAAGAATCAAAATAGGTTGCTTTTTTTTAATTA 401
                        ** ** ** *     * * * * *  * *****   *    * *     *    ** **

consensus_10943#0      TTTGCTTGGAATAAACAAAACCA----AAATAAGGGATTAAACTAGACCAGCAATCTAGG 1068
consensus_10943#2      TTTGCTTGGAATAAACAAAACCA----AAATAAGGGATTAAACTAGACCAC--ATCTAG- 358
consensus_10943#1      TTCATCTAAAACGA-TAGGATCATATTGAATTAATGAAGAAAGCAAATGAAGCAAAAAGT 460
                       **    *  **  *  *  * **     *** *  **  ***  * *  *   *   ** 

consensus_10943#0      CACCAACC-CATATCGATAATGCTCATATTATCATCATTAATATCAATGTAGTAAACTGG 1127
consensus_10943#2      CACCAACC-CAAGTTCCGTGAGC------------------------------------- 380
consensus_10943#1      AACCAACTGTGAAACCAATGTGGTGATTATAACAAATTAAGGACAGTAACAAAGAAAATA 520
                        ******              *                                      

consensus_10943#0      ATACTTCTTTATGAATGTGACATAGATATTCTGTGTATGAAATCGAATTACTACTGCATC 1187
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      CAAGCACCGTGTATGTATGCGTGT------------------------------------ 544
                                                                                   

consensus_10943#0      GATCCTCGACCATGAAACGTCGAAACCATAGTTCACTTTTATCTCCAGGACGTACAACCA 1247
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      ATAACCGAGAATAATGCCAACAATTTTTACGAACTTTTCTCAGCAATGTACACAGATTAC 1307
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      GTGAAATTTCGTTATCAAAATTACACAAATCATAGATTTTTTCTGATTCAAAATGTTCCG 1367
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      GATTTTGAACATTGAACACTGCTTGAATCCATTCCGATGAAATATTTGGACCGATCCACA 1427
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      TGATAAGATAAATTCCATTATCCAATAAATAAGCTGCGTCCATTTGTAAACGATCATATG 1487
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      AACAGCGTATAGCAGCTGGAGGATAAGGTATATCACCTTCGAAATTCAGTGAAAGATCAT 1547
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      GAATAGGATATAAGTGAGGATAAATATAACAATTGGATTGTTTAACGTCCATTTGGTTGA 1607
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      CCAAAAACATTTGCCAACAACGATCATCAATTGTAATACCATCAGCAGGACTAAAGGCTT 1667
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      CAGTTTTCATAAGACATTGTATGTACAAAGGAAATACTTTCATATTTCGTGGTAATACTA 1727
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      ATTCACTAGGATTCGAATTTACATCATTCGGACCACAAGCACAATGACGACGATAAGCAG 1787
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      CCAAGGTGTTAGCAGCTCTTGTTGTTAAATCATCCATTACTTGTGAATGTGTACGGTTGA 1847
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      GTAGAGAACGCATTGAATATTTACTCAACCAATTCATATGTGCGTCTAATTCGACAAGAC 1907
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      GAAATATATCAGGTATCATACTTGTCACTGGAATTGACAGATTATGAATACGTAGCCTTC 1967
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      GCTGTCCAGATACTGAGGTATAAAGACATGCAACTTGAATGAATACGAGTTCACCTTCTT 2027
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      GAAGTTTATCATCATGACGTAATTCCGCTGTGATCGCCATATCTGAACTAACACTAGCCA 2087
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      ATTCAACATCAGTTGTATTAGGTAGGTAACAATTACCAAAGAATTCAACAGGTCTAATAC 2147
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      CAGTGCTTGTTCGAACACGCATAACAGCGTTGAAAGCTTGTAGGTTGGTTAAAGTACGTT 2207
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      GGAGATCGGCCAAAAACTGATGACCTTGTAGGTCAGCCTGGAAACAGTTATATTTGAATA 2267
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      AACGACCAGATGTTATTCTGGGCACTTCGGCTAAAGAAGCAATATCAACAAATGAATTGG 2327
consensus_10943#2      ------------------------------------------------------------
consensus_10943#1      ------------------------------------------------------------
                                                                                   

consensus_10943#0      GAAAAAGAAAAAGATCT 2344
consensus_10943#2      -----------------
consensus_10943#1      -----------------