These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10950#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 26 consensus length = 1523 fasta sequence [CTAGGTGACGTAGCCGTGCATAAAAAAGACTAATTAAAGCAGAATCTGCAAACCATGATGTCTTGTTTTCAGAACCTGTCAGACGCACTAGATGATACTTTTTCTGCAACTGTGCAGTCGGAAGATGAACTAGATTACGCATCTGCAACACTCGTCTTAGCTGGATTATTACAAATTCATTCCCGCACACCTCGTTATGCATTTCATCAGGCGCGGTTAGATTCATTTCCAAAAGTAATTCATTCGAAGGATTCTGCGAATGATTCAACAATATGCCGATCAAAGTCTCCAGTTCCATCTCCTTCTGAGCTGGCTTCGGCAGGCTTTTTTCACACCGGTTCTGGGGACGAGACTATCTGCCCTGCTTGTGGTTTGGGGTTACGTGATTGGCAGGCCACAGATCAACCTGAAGCGTGTCATATCGCATATTCGGCTGCCGCAACAGCTGCCATAGAAATGGGTTCGGGAGACGGACATTATCGCCCACCTATCCCGACTATACCATGTCTTTATCTTATTGT-CCATCGTCTTCTTGTTTCCGAAATTCCTCTTGCTCGTAAGTCTTTGGTTCCGGTTGGACAAACGCAATCT-GTCCGAGGTCTTCCTGGAGTAATCTCTCGGCCTGTAGTACATTTCACTGACCAATCTTCTCAAAAC-TCATCTTGTGAATATCCATCTTTGGCAGATAGACTATATGCGATAGCTCATATGATGACTGCGTCTCCAGCT-CCTCAAGGGTGGCCAGTAGAAAATGCACGTGCTCTGGGTCATTCAGATGATTTAATTG-TTCTTGCGTTGTGGCGTTTGCAAGCGGAAGCTGCTGGAATGGGGCAGGCGTGTCCACCAATAAAGTCAATCTATATTGGTCCTCAAGCCACAACAGAGCTATTAAAAGCTATTTTAAGAGTTCAAGAAGGTTATGATATATCTTCTAAGAAC-ACCTCGAATTCTATCTGGATGCTTTCGACGAGGAAGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATGAAGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTTTGTCACGGTGTCGTCGATATTTGCGACCACCGCAACAACAACAATTTAGTGACTCAACTTCATCTCCTCGTTCAGTTGAATCATATGGATTACAAATGAAAAAGATCCACCTTCCTCGTTTTTATCAGTTTCTCGTTTGGTGGTCTCATCGTTGGCCTGCAACTCATAACAATAATGCCCTGAAATAATTTAAATGCCTCTGAGTACTTAATCTTATTCGAAAGACAGATGACTTGTGGAATGCACGTGCTACCCACTTTGGAAGCTAGAACACCTACTCCCAGTTGCTCATATTACATTAATCATTCAGTTTCAAAATAATATTTAATTTCACATACTTTAGGGAACAGTATCTATTTCTTTCGATATATTTCAACAAATTCACTTCACACCTAATATACTTGGTAAATTAAGTTTGTAATTTCCCTTGTAAAAAATAAATATCCCA-TTTAGANGATTTCGAGTTAATA] [-] EMBL CD170250 [CTAGGTGACGTAGCCGTGCATAAAAAAGACTAATTAAAGCAGAATCTGCAAACCATGATGTCTTGTTTTCAGAACCTGTCAGACGCACTAGATGATACTTTTTCTGCAACTGTGCAGTCGGAAGATGAACTAGATTACGCATCTGCAACACTCGTCTTAGCTGGATTATTACAAATTCATTCCCGCACACCTCGTTATGCATTTCATCAGGCGCGGTTAGATTCATTTCCAAAAGTAATTCATTCGAAGGATTCTGCGAATGATTCAACAATATGCCGATCAAAGTCTCCAGTTCCATCTCCTTCTGAGCTGGCTTCGGCAGGCTTTTTTCACACCGGTTCTGGGGACGAGACTATCTGCCCTGCTCGTGGTTTGGGGTTACGTGATTGGCAGGCCACAGATCAACCTGAAGCGTGTCATATCGC ] [+] EMBL CD193726 [ GATTCTGCGAATGATTCAACAATATGCCGATCAAAGTCTCCAGTTCCATCTCCTTCTGAGCTGGCTTCGGCAGGCTTTTTTCACACCGGTTCTGGGGACGAAACTATCTGCCCTGCTTGTGGTTTGGGGTTACGTGATTGGCAGGCCACAGATCAACCTGAAGCGTGTCATATCG ] [+] EMBL CD071726 [ ATCTGCCCTGCTTGTGGTTTGGGGTTACGTGATTGGCAGGCCACAGATCAACCTGAAGCGTGTCATACCGCATATTCGGCTGCCGCAACAGCTGCCATAGAAATGGGTTCGGGAGACGG ] [+] EMBL CD160135 [ tgTGCTTGTGGTTTGGGGTTACGTGATTGGCAGGCCACAGATCAACCTGAAGCGTGTCATATCGCATATTCGGCTGCCGCAACAGCTGCCATAGAAATGGGTTCGGGAGACGGACATTATCGCCCACCTATCCCGACTATACCATGTCTTTATCTTATTGT CCATCGTCTTCTTGTTTCCGAAATTCCTCTTGCTCGTAAGTCTTTGGTTCCGGTTGGACAAACGCAATCT GTCCGAGGTCTTCCTGGAGTAATCTCTCGGCCTGTAGTACATTTCACTGACCAATCTTCTCAAAAC TCATCTTGTGAATATCCATCTTTGGCAGATAGACTATATGCGATAGCTCATATGATGACTGCGTCTCCAGCT CCTCAAGGGTGGCCAGTAGAAAATGCACGTGCTCTGGGTCATTCAGATGATTTAATTG TTCTTGCGTTGTGGCGTTTGCAAGCGGAAGCTGCTGGAAT ] [-] EMBL CD068531 [ CCACAGATCAACCTGAAGCGTGTCATATCGCATATTCGGCTGCCGCAACAGCTGCCATAGAAATGGGTTCGGGAGACGGACATCATCGCCCACCTATCCCGACTATACCATGTCTGTATCTTATTGTGCCATCGTCTTCTTGTTTCCGAAATTCCTCTTGCTCGTAAGTCTGTGGTTCCGGTTGGACACACGCAATCTGGTCCGAGGTCTTCCTGGAGTAATCTCTCGGCCTGTAGTACATTTCACTGACCAATCTTCGCGAAACGTCA ] [+] EMBL BG932375 [ gAGATCAACCTGAAGCGTGTCATATCGCATATTCGGCTGCCGCAACAGCTGCCATGGAAATGGGTTCGGGAGACGGACATTATCGCCCACCTATCCCGACTATACCATGTCTTTATCTTATTGT CCATCGTCTTCTTGTTTCCGAAATTCCT ] [+] EMBL CD200368 [ AGCGTGTCATATCGCATATTCGGCTGCCGCAACAGCTGCCATAGAAATAGGTTCGGGAGACGGACATTATCGCCCACCTATCCCGACTATACCATGTCTTTATCTTATTGT CCATCGTCTTCTTGTTTCCGAAATTCCTCTTGCTCGTAAGTCTTTGGTTCCGGTTGGACAAACGCAATCT GTCCGAGGTCTTCCTGGAGTAATCTCTCGGCCTGTAGTACATTTCACTGACCAATCTTCTCAAAAC TCATCTTGTGAATATCCATCTTTGGCAGATAGACTATATGCGATAGCTCATATGATGACTGCGTCTCCAGCTCCCTC AGGGTGGCCAGTAGAAAATGCACGTGCTCTGGGTCATTCAGATGATTTAATTGNTNNCTGCG TGTGNCGTTTGCA ] [-] EMBL CD132256 [ CGTGTCATATCGCATATTCGGCTGCCGCAACAGCTGCCATAGAAATGGGTTCGGGAGACGGACATTATCGCCCACCTATCCCGACTATACCATGTCTTTATCTTATTGT CCATCGTCTTCTTGTTTCCGAAATTCCTCTTGCTCGTAAGTCTTTGGTTCCGGTTGGACAAACGCAATCT GTCCGAGGTCTTCCTGGAGTAATCTCTCGGCCTGTAGTACATTTCACTGACCAATCTTCTCAAAAC TCATCTTGTGAATATCCATCTTTGGCAGATAGACTATATGCGATAGCTCATATGATGACTGCGTCTCCAGCT CCTCAAGGGTGGCCAGTAGAAAATGCACGTGCTCTGGGTCATTCAGATGATTTAATTG TTCTTGCGTTGTGGC ] [-] EMBL CD194531 [ CCCACCTATCCCGACTATACCATGTCTTTATCTTATTGT CCATCGTCTTCTTGTTTCCGAAATTCCTCTTGCTCGTAAGTCTTTGGTTCCGGTTGGACAAACGCAATCT GTCCGAGGTCTTCCTGGAGTAATCTCTCGGCCTGTAGTACATTTCACTGACCAATCTTCTCAAAAC TCATCTTGTGAATATCCATCTTTGGCAGATAGACTATATGCGATAGCTCATATGATGACTGCGTCTCCAGCT CCTCAAGGGTGGCCAG ] [-] EMBL CD193034 [ CTATCCCGACTATACCATGTCTTTATCTTATTGT CCATCGTCTTCTTGTTTCCGAAATTCCTCTTGCTCGTAAGTCTTTGGTTCCGGTTGGACAAACGCAATCT GTCCGAGGTCTTCCTGGAGTAATCTCTCGGC ] [+] EMBL CD141035 [ CCTCTTGCTCGTAAGTCTTTGGTTCCGGTTGGACAAACGCAATCT GTCCGAGGTCTTCCTGGAGTAATCTCTCGGCCTGTAGTACATTTCACTGACCAATCTTCTCAAAAC TCATCTTGTGAATATCCATCTTTGGCAGATAGACTATAAGCGATAGCTCATATGATGACTGCGTCTCCAGCT CCTCAAGGGTGGCCAGTAGAAAATGCACGTGCTCCGGGGCATTCAGATGATTTAATTG TTCTTGCGTTGTGGCGTTTGCAAGCGG ] [+] EMBL CD139898 [ TTGTGAATATCCATCTTTGGCAGATAGACTATATGCGATAGCTCATATGATGACTGCGTCTCCAGCT CCTCAAGGGTGGCCAGTAGAAAATGCACGTGCTCTGGGTCATTCAGATGATTTAATTG TTCTTGCGTTGTGGCGTTTGCAAGCGGAAGCTGCTGGAATGGGGCAGGCGTGTCCACCAATAAAGTCAATCTATATTGGTCCTCAAGCCACAACAGAGCTATTAAAAGCTATTTTAAGAGTTCAAGAAGGTTATGATATATCTTCTAAGAAC ACCTCGAATTCTATCTGGATGCTTTCGACGAGGAAGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATGAA ] [-] EMBL BG930288 [ CCACCAATAAAGTCAATCTATATTGATCCTCAAGCCACAACAGAGCTATTAAAAGCTATTTTAAGAGTTCAAGAAGGTTATGATATATCTTCTA ] [+] EMBL CD180289 [ AGCTATTATAAGAGTTCAAGAAGGTTATGATATATCTTCTAAGAACAACCTCGAATTCTATCTGGATGCTTTCTACGATGAAGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATGA ] [-] EMBL CD180412 [ GCTATTTTAAGAGTTCAAGAAGGTTATGATATATCTTCTAAGAACAACCTCGAATTCTATCTGGATGCTTTCGACGAGGAAGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATGAAGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTCTGTCACGGTGTCGTCGATATTTGCGACCACCGCAACAACAACAATTTAGTGACTCAACTTCATCTCCTCGTTCAGTTGAATCATATGGATTACAAATGAAAAAGATCCACCTTCCTCGTTTTTATCAGTTTCTCGTTTG ] [-] EMBL CD076974 [ ACCTCGAATTCTATCTGGATGCTTTCGACGAGGAAGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATGAAGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTTAGTCACGTTGTCGTCGATATTTGCGACCACCGCAACAACAGCAATTTAGTGACTCAACTTCATCTCCTCGTTCAGTTGAATCATATGGATTACAAATGAAAAAGATCCACCTTCCTCGTTTTTATCAGTTTCTCGTTTGGTGGTCTCATCGTTGGCCTGCAACTCATAACAATAATGCCCTGAAATAATTTAAATGCCTCTGAGTACTTAATCTTATTCGAAAGACAGATGACTTGTGGGGTGCACGTGCTACCCACTTTGGAAGCTAGAACACCTACTCCCAGTTGCTCATATTACATTAATCATTCAGTTTCAAAATAATATTTAATTTCACATACTTTAGGGAACAGTATCTATTTCTTTCGATATATTTCAACAAATTCACTTCACACCTAATATACTTGGTAAATTAAGTTTGTAATTTCCCTTGTAAAAAATAAATATCCCA TTTAGANGATTTCGAGTTAATA] [-] EMBL CD134253 [ CTGGATGCTGTCGACGAGGAAGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATGAAGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTTTGTCACGGTGTCGTCGATATTTGCGACCACCGCAACAACAACAATTTAGTGACTCAACTTCATCTCCTCGTTCAGTTGAATCATATGGATTACAAATGAAAAAGATCCACCTTCCTCGCTTTTATCAGTTTCTCGTTTGGTGGTCTCATCGTTGGCCTGCAACTCATAACAATAATGCCCTGAAATAATTTAAATGCCTCTGAGTACTTAATCTTATTCGAAAGACAGATGACTTGTGGAATGCACGTGCTACCCA ] [+] EMBL BG930380 [ GCTTTCGACGAGGAAGAAGTACATTCCGCCGGTGAAACGTTAAGTGAAGGCAATGAAGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTTTGTCACGGTGTCGTCGATATTTGCGACCACCGCAACAACAACAATTTAGTGACTCAACTTCATCTCCTCGTTCAGTTGAATCATATGGATTACAAATGAAAAAGA ] [+] EMBL BG930257 [ GCTTTCGACGAGGAAGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATG AGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTTTGTCACGGTGTCGTCGATATTTGCGACCACCGCAACAACAACAATTTAGTGACTCAACTTCATCTCCTC TTCAGTTGAATCATATGGATTACAAATGAAAAAGA ] [+] EMBL BG931751 [ GCTCTCGACGAGGAAGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATGAAGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTTTGTCACGGTGTCGTCGATATTTGCGACCACCGCAACAACAACAATTTAGTGACTCAACTTCATCTCCTCGTTCAGTTGAATCATATGGATTACAAATGAAAAAGATCCACCTTCCTCGTTTTTATCAGTTTCTCGTTTGGTGGTCTCATCGTTGGCCTGCAACTCATAACAATAATGCCCTGAAATAATTTAAATGCCTCTGAGTACTTAATCTTATTCGAAAGACAGATGACTTGTGGAATGCACGTGCTACCCACTTTGGAAGCTAGAACACCGACTCCCCGT ] [+] EMBL BG930378 [ GCTTTCGACGAGGAAGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATGAAGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTTTGTCACGGTGTCGTCGATATTTGCGACCACCGCAACAACAACAATTTAGTGACTCAACTTCATCTCCTCGTTCAGTTGAATCATATGGATTACAAATGAAAAAGATCCACCTTCCTCGTTTTTATCAGa ] [+] EMBL BG930535 [ GCTTTCGACGAGGAAGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATGAAGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTTTGTCACGGTGTCGTCGATATTTGCGACCACCGCAACAACAACAATTTAGTGACTCAACTTCATCTCCTCGCTCAGTTGAATCATATGGATTACAAATGAAAAAGA ] [-] EMBL BG930147 [ CTTTCGACGAGGAAGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATGAAGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTTTGTCACGGTGTCGTCGATATTTGCGACCACCGCAACAACAACAATTTAGTGACTCAACTTCATCTCCTCGTTCAGTTGAATCATATGGATTACAAATGAAAAAGAc ] [-] EMBL CD092735 [ tccAGTAAGAAGTTCATTCCGGCGGTGAAACATTAAGTGAAGGCAATGAAGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTTTGTCACGGTGTCGTCGATATTTGCGACCACCGCAACAACAACAATTTAGTGACTCAACTTCATCTCCTCGTTCAGTTGAATCATATGGATTACAAATGAAAAAGATCCACCTTCCTCGTTTTTATCAGTTTCT ] [-] EMBL BG932363 [ AGAAGTACATTCCGCCGGTGAAACATTAAGTGAAGGCAATGAAGGTGACATCACGGCAGAAGATGCAGAGACAGCAGCTTTGTCACGGTGTCGCCGATATTTGCGACCACCGCAACAACAACAATTTAGTGACTCAACTTCATCTCCTCGTTCAGTTGAATCATATGGATTACAAATGAAAAAGATCCACCTTCCTCGTTTTTATCAGTTTCTCGTTTGGTGGTCTCATCGTTGGCCTGCAACTCATAACAATAATGCCCTGAAATAATTTAAATGCCTCTGAGTACTTAATCTTATTCGAAAGACAGATGACTTGTGGAATGCACGTGCTACCCACTTTGGAAGCTAGAACACCTACTt ] [+] EMBL AI740353 [ ATCAGTTTCTCGTTTGGTGGTCTCATCGTTGGCCTGCAACTCATAACAATAATGCCCTGAAATAATTTAAATGCCTCTGAGTACTTAATCTTATTCGAAAGACAGATGACTTGTGGAATGCACGTGCTACCCACTTTGGAAGCTAGAACACCTACTCCCAGTTGCTCATATTACATTAATCATTCAGTTTCAAAATAATATTTAATTTCACATACTTTAGGGAACAGTATCTATTTCTTTCGATATATTTCAACAAATTCACTTCACACCTAATATACTTGGTAAATTAAGTTTGTAATTTCCCTTGTAAAAAAT ATATCCCATTTTATGGGATTTCGA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||