cluster # 10954

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Schistosoma mansoni
cluster # 10954 cluster # 10954 Sequences # 26 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10954#0 length = 1300 sequences # 24

consensus_10954#1 length = 406 sequences # 1
consensus_10954#2 length = 216 sequences # 1

consensusID : consensus_10954#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 24
consensus length = 1300
fasta sequence

                              [TTAGATTTAGCTGTGATCATGTACACAAGTGGATCAACAGGTCAACCTAAAGGCGTTGAAATGACCCATGAAAATTTAGTAAGTGCCATAGCTGGTCATCTACAACGTTTACCGAAACTTCGTAGTAATTACGACATATATATAGGATATTTACCACTAGCTCATGTTTTAGAGCTTACCTGCGAATTATCCTGTGTCATTATGGGTGTACGAATTGGTTACTCGAATCCACAAACACTAACGGACACTTCATCCCGTATTAAACGAGATTACTGCTTAGGTGATGTCAGTCTTCTTCGACCTACTCTTTTTGCCAGTGTACCTACTGTATTAGAACGTATTTCTAAGGCTGTTTGGGAAAAAGTGAACGCTGGCGGTGAATTTCTTCAAGCTCTCTTCAAATTTGCATATGCCTACAAATGCCGACGAATTCATGGTGGTTTTCCAAGTTTCCTCGTGGATCGGTTGATTTTCCGTAAGGTTAGATCGCTCATGGGTGGACGAATTCGTTATA-TTGTTTGTGGTGGAGCACCATTATCAGAAGATTCACAATTATTCACAAATATATGCATCGCACCTATTGTACAAGGTTATGGGCTTACTGAGTCATGTTCTACTGGCGCTTTGATGGAGTGTGGGGATC-TGCGATGTAATCATTCTGGAGCACCTGCTCCT-ACTCTGCAGATTCGTCTAAGAGCATGGCCTGAAGGTGGATATTCTCCCTATGATACACCGTCTCCACGTGGGGAGATTCTTTTATCTGGTAAACCGGTTTCTCGAGGTTATTACAAACAGCCTGAATTGACAGCTAGAGATTTCATAACCGATCAAGACGGTACACGTTGGTTTTGTACTGGGGATATTGGCTTAATGCATACAGATGGAAGTTTATCAATAATTGACCGTAAAAAAGATCTTGTTAAACTACAAGCTGGGGAATATGTTTCCCTTAGCAAAGTTGAAATGGCTCTTAGTCAATCAGCCTATGTTGAACAAATTTGTGTTTATGTGGACCCGATGCAAAATTATCCAATCTGTTTCGTGTCACCGAAATTAAAATCGCTTATTGACTTAGCAGAATCTTTGAACTTAGTCCACTTACTACATGAAGCTCGTTCAAAACTTCCTATAGAATCAATGAAGGATTCCATCGCTATCGAACATGTGGAACGAGCTGTTCTCTGTAAACACCCTCAAATTATACAAGCTGTGTTAAAAGATTTACAACGAGTTGCTAGAGAGAAACGTTTAAGCACGTTTGAAATACCACAAAAAGTCGCTTTAGATACTATAGCTTGGA]

[-] EMBL CD097414             [TTAGATTTAGCTGTGATCATGTACACAAGTGGATCAACAGGTCAACCTAAAGGCGTTGAAATGACCCATGAAAATTTAGTAAGTGCCATAGCTGGTCATCTACAACGTTTACCGAAACTTCGTAGTAATTACGACATATATATAGGATATTTACCACTAGCTCATGTTTTAGAGCTTACCTGCGAATTATCCTGTGTCATTATGGGTGTACGAATTGGTTACTCGAATCCACAAACACTAACGGACACTTCATCCCGTATTAAACGAGATTACTGCTTAGGTGATGTCAGTCTTCTTCGACCTACTCTTTTTGCCAGTGTACCTACTGTATTAGAACGTATTTCTAAGGCTGTTTGGGAAAAAGTGAACGCTGGCGGTGAATTTCTTCAAGCTCTCTTCAAATTTGCATATGCCTACAAATGCCGACGAATTCATGGTGGTTTTCCAAGTTTCCTCGTGGATCGGTTGATTTTCCGTAAGGTTAGATCGCTCATGGGTGGACGAATTCGTTATA TTGTTTGTGGTGGAGCACCATTATCAGAAGATTCACAATTATTCACAAATATATGCATCGCACCTATTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD147446             [    ATTTAGCTGTGATCATGTACACAAGTGGATCAACAGGTCAACCTAAAGGCGTTGAAATGACCCATGAAAATTTAGTAAGTGCCATAGCTGGTCATCTACAACGTTTACCGAAACTTCGTAGTAATTACGACATATATATAGGATATTTACCACTAGCTCATGTTTTAGAGCTTACCTGCGAATTATCCTGTGTCATTATGGGTGTACGAATTGGTTACTCGAATCCACAAACACTAACGGACACTTCATCCCGTATTAAACGAGATTACTGCTTAGGTGATGTCAGTCTTCTTCGACCTACTCTTTTTGCCAGTGTACCTACTGTATTAGAACGTATTTCTAAGGCTGTTTGGGAAAAAGTGAACGCTGGCGGTGAATTTCTTCAAGCTCTCTTCAAATTTGCATATGCCTACAAATGCCGACGAATTCATGGTGGTTTTCCAAGTTTCCTCGTGGATCGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD097401             [                                                                 CCATGAAAATTTAGTAAGTGCCATAGCTGGTCATCTACAACGTTTACCGAAACTTCGTAGTAATTACGACATATATATAGGATATTTACCACTAGCTCATGTTTTAGAGCTTACCTGCGAATTATCCTGTGTCATTATGGGTGTACGAATTGGTTACTCGAATCCACAAACACTAACGGACACTTCATCCCGTATTAAACGAGATTACTGCTTAGGTGATGTCAGTCTTCTTCGACCTACTCTTTTTGCCAGTGTACCTACTGTATTAGAACGTATTTCTAAGGCTGTTTGGGAAAAAGTGAACGCTGGCGGTGAATTTCTTCAAGCTCTCTTCAAATTTGCATATGCCTACAAATGCCGACGAATTCATGGTGGTTTTCCAAGTTTCCTCGTGGATCGGTTGATTTTCCGTAAGGTTAGATCGCTCATGGGTGGACGAATTCGTTATA TTGTTTGTGGTGGAGCACCATTATCAGAAGATTCACAATTATTCACAAATATATGCATCGCACCTATTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD147677             [                                                                                                                                                                         TAGAGCTAACCTGCGAATTATCCTGTGTCATTATGGGTGTACGAATTGGTTACTCGAATCCACAAACACTAACGGACACTTCATCCCGTATTAAACGAGATTACTGCTTAGGTGATGTCAGTCTTCTTCGACCTACTCTTTTTGCCAGTGTACCTACTGTATTAGAACGTATTTCTAAGGCTGTTTGGGAAAAAGTGAACGCTGGCGGTGAATTTCTTCAAGCTCTCTTCAAATTTGCATATGCCTACAAATGCCGACGAATTCATGGTGGTTTTCCAAGTTTCCTCGTGGATCGGTTGATTTTCCGTAAGGTTAGATCGCTCATGGGTGGACGAATTCGTTATA TTGTTTGTGGTGGAGCACCATTATCAGAAGATTCACAATTATTCACAAATATATGCATCGCACCTATTGTACAAGGTTATGGGCTTACTGAGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD158307             [                                                                                                                                                                                                        TATGGGTGTACGAA TGGTTACTCGAATCCACAAACACTAACGGACACTTCATCCCGTATTAAACGAGATTACTGCTTAGGTGATGTCAGTCTTCTTCGACCTACTCTTTTTGCCAGTGTACCTACTGTATTAGAACGTATTTCTAAGGCTGTTTGGGAAAAAGTGAACGCTGGCGGTGAATTTCTTCAAGCTCTCTTCAAATTTACATATGCCTACAAATGCCGACGAATTCATGGTGGTTTTCCAAGTTTCCTCGTGGATCGGTTGATTTTCCGTAAGGTTAGATCGCTCATGGGTGGACGAATTCGTTATA TTGTCTGTGGTGGAGCACCATTATCAGAAGATTCACAATTATTCACAAATATATGCATCGCACCTATTGTACAAGGTTATGGGCTTACTGAGTCATGTTCTACTGGCGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD150156             [                                                                                                                                                                                                                      TTGGTTACTCGAATCCACAAACACTAACGGACACTTCATCCCGTATTAAACGAGATTACTGCTTAGGTGATGTCAGTCTTCTTCGACCTACTCTTTTTGCCAGTGTACCTACTGTATTAGAACGTATTTCTAAGGCTGTTTGGGAAAAAGTGAACGCTGGCGGTGAATTTCTTCAAGCTCTCTTCAAATTTGCATATGCCTACAAATGCCGACGAATTCATGGTGGTTTTCCAAGTTTCCTCGTGGATCGGTTGATTTTCCGTAAGGTTAGATCGCTCATGGGTGGACGAATTCGTTATAGTTGTTTGTGGTGGAGCACCATTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD112393             [                                                                                                                                                                                                                      TTGGTTACTCGAATCCACAAACACTAACGGACACTTCATCCCGTATTAAACGAGATTACCGCTTAGGTGATGTCAGTCTTCTTCGACCTACTCTTTTTGCCAGTGTACCTACTGTATTAGAACGTATTTCTAAGGCTGTTTGGGAAAAAGTGAACGCTGGCGGTGAATTTCTTCAAGCTCTCTTCAAATTTGCATATGCCTACAAATGCCGACGAATTCATGGTGGTTTTCCAAGTTTCCTCGTGGATCGGTTGATTTTCCGTAAGGTTAGATCGCTCATGGGTGGACGAATTCGTTATA TTGTTTGTGGTGGAGCACCATTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD119963             [                                                                                                                                                                                                                                                                       ACGAGATTACTGCTTAGGTGATGTCAGTCTTCTTCGACCTACTCTTTTTGCCAGTGTACCTACTGTATTAGAACGTATTTCTAAGGCTGTTTGGGAAAAAGTGAACGCTGGCGGTGAATTTCTTCAAGCTCTCTTCAAATTTGCATATGCCTACAACTGCCGTCGAATTCATGGTGGTTTTCCAAGTTTCCTCGTGGATCGGTTGATTTTCCGTAAGGTTAGATCGCTCATGGGTGGACGAATTCGTTATA TTGTTTGTGGTGGAGCACCATTATCAGAAGATTCACAATTATTCACAAATATATGCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD122685             [                                                                                                                                                                                                                                                                                              TCAGTCTTCTTCGACCTACTCTTTTTGCCAGTGTACCTACTGTATTAGAACGTATTTCTAAGGCTGTTTGGGAAAAAGTGAACGCTGGCGGTGAATTTCTTCAAGCTCTCTTCAAATTTGCATATGCCTACAAATGCCGACGAATTCATGGTGGTTTTCCAAGTTTCCTCGTGGATCGGTTGATTTTCCGTAGGGTTAGATCGCTCATGGGTGGACGAATTCGTTATA TTGTTTGTGGTGGAGCACCATTATCAGAAGATTCACAATTATTCACAAATATATGCATCGCACCTATTGTACAAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD122616             [                                                                                                                                                                                                                                                                                              TCAGTCTTCTTCGACCTACTCTTTTTGCCAGTGTACCTACTGTATTAGAACGTATTTCTAAGGCTGTTTGGGAAAAAGTGAACGCTGGCGGTGAATTTCTTCAAGCTCTCTTCAAATTTGCATATGCCTACAAATGCCGACGAATTCATGGTGGTTTTCCAAGTTTCCTCGTGGATCGGTTGATTTTCCGTAAGGTTAGATCGCTCATGGGTGGACGAATTCGTTATA TTGTTTGTGGTGGAGCACCATTATCAGAAGATTCACAATTATTCACAAATATATGCATCGCACCTATTGTACAAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD147470             [                                                                                                                                                                                                                                                                                                                                  CTACTGTATTAGAACGTATTTCTAAGGCTGTTTGGGAAAAAGTGAACGCTGGCGGTGAATTTCTTCAAGCTCTCTTCAAATTTGCATATGCCTACAAATGCCGACGAATTCATGGTGGTTTTCCAAGTTTCCTCGTGGATCGGTTGATTTTCCGTAAGGTTAGATCGCTCATGGGTGGACGAATTCGTTATA TTGTTTGTGGTGGAGCACCATCATCAGAAGATTCACAATTATTCACAAATATATGCATCGCACCTATTGTACAAGGTTATGGGCTTACTGAGTCATGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD150148             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTTTCCGTAAGGTTAGATCGCTCATGGGTGGACGAATTCGTTATA TTGTCTGTGGTGGAGCACCATTATCAGAAGATTCACAATTATTCACAAATATATGCATCGCACCTATTGTACAAGGTTATGGGCTTACTGAGTCATGTTCTACTGGCGCTTTGATGGAGTGTGGGGATC TGCGATGTAATCATTCTGGAGCACCTGCTCCT ACTCTGCAGGTTCGTCTAAGAGCATGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD150142             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTTTCCGTAAGGTTAGATCGCTCATGGGTGGACGAATTCGTTATA TTGTCTGTGGTGGAGCACCATTATCAGAAGATTCACAATTATTCACAAATATATGCATCGCACCTATTGTACAAGGTTATGGGCTTACTGAGTCATGTTTTACTGGCGCTTTGATGGAGTGTGGGGATC TGCGATGTAATCATTCTGGAGCACCTGCTCCT ACTCTGCAGATTCGTCTAAGAGCATGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD150199             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTTTCCGTAAGGTTAGATCGCTCATAGGTGGACGAATTCGTTATA TTGTCTGTGGTGGAGCACCATTATCAGAAGATTCACAATTATTCACAGATATATGCGTCGCACCTATTGTACAAGGTTATGGGCTTACTGAGTCATGTTCTACTGGCGCTTTGATGGAGTGTGGGGATC TGCGATGTAATCATTCTGGAGCACCTGCTCCT ACTCTGCAGATTCGTCTAAGAGCATGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD150208             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTTTCCGTAAGGTTAGATCGCTCATGGGTGGACGAATTCGTTATA TTGTTTGTGGTGGAGCACCATTATCAGAAGATTCACAATTATTCACAAATATATGCATCGCACCTATTGTACAAGGTTATGGGCCTACTGAGTCATGTTCTACTGGCGCTTTGATGGAGTGTGGGGATC TGCGATGTAATCATTCTGGAGCACCTGCTCCT ACTCTGCAGATTCGTCTAAGAGCATGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD150265             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTTTCCGTAAGGTTAGATCGCTCATGGGTGGACGAATTCGTTATA TTGTCTGTGGTGGAGCACCATTATCATAAGATTCACAATTATTCACAAATATATGCATCGCACCTATTGTACAAGGTTATGGGCTTACTGAGTCATGTTCTACTGGCGCTTTGATGGAGTGTGGGGATC TGCGATGTAATCATTCTGGAGCACCTGCTCCT ACTCTGCAGATTCGTCTAAGAGCATGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD150145             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTTTCCGTAAGGTTAGATCGCTCATGGGTGGACGAATTCGTTATA TTGTCTGTGGTGGAGCACCATTATCAGAAGATTCACAATTATTCACAAATATATGCATCGCACCTATTGTACAAGGTTATGGGCTTACTGAGTCATGTTCTACTGGCGCTTTGATGGAGTGTGGGGATC TGCGATGTAATCATTCTAGAGCACCTGCTCCT ACTCTGCAGATTCGTCTAAGAGCATGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD160196             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACGAATTCGTTATA TTGTTTCTGGTGGAGCACCATTATCAGAAGATTCACAATTATTCACAAATATATGCATCGCACCTATTGTACAAGGTTATGGGCTTACTGAGTCATGTTCTACTGGCGCTTTGATGGAGTGTGGGGATC TGCGATGTAATCATTCTGGAGCACCTGCTCCT ACTCTGCAGATTCGTCTAAGAGCATGGCCTGAAGGTGGATATTCTCCCTATGATACACCGTCTCCACGTGGGGAGATTCTTTTATCTGGTAAACCGGTTTCTCGAGGTTATTACAAACAGCCTGAATTGACAGCTAGAGATTTCATAACCGATCAAGACGGTACACGTTGGTTTTGTACTGGGGATATTGGCTTAATGCATACAGATGGAAGTTTATCAATAATTGACCGTAAAAAAGATCTTGTTAAACTACAAGCTGGGGAATATGTTTCCCTTAGCAAAGTTGAAATGGCTCT                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD189797             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GAGTCATGTTCTACTGGCGCTCTGATGGATTGTGGGGATCGTGCGATGTACTCATTCTGGAGCACCTGCTCCTCACTCTGCAGATTCGTCTAACAGCATGGCCTGAAGGTGGATATTCTCCCTATGATACACCGTCTCCACGTGGGGAGATTCTTTTATCTGGTAAACCGGTTTCTCGAGGTTATTACAAACAGCCTGAATTGACAGCTAGAGATTTCATAACCGATCAAGACGGTACACGTTGGTTTTGTACTGGGGATATTGGCTTAATGCATACAGATGGAAGTTTATCAATAATTGACCGTAAAAAAGATCTTGTTAAACTACAAGCTGGGGAATATGTTTCCCTTAGCAAAGTTGAAATGGCTCTTAGTCAATCAGCCTATGTTGAACAAATTTGTGTTTATGTGGACCCGATGCAAAATTATCCAATCTGTTTCGTGTCACCGAAATTAAAATCGCTTATTGACTTAGCAGAATCTTTGAACTTAGTCCACTTACTACATGAAGCTCGTTCAAAACTTCCTATAGAATCAATGAAGGATTCCATCGCTATCGAACATGTGGAACGAGCTNGTCTCTGTAAACACCCTCAAATTATACAAGCTGTNNGTAAAGATTTACAACGAGTTGCTAGAGAGAAACGTTT AGCACGTTTG AATACCAC AAAAGTCGCTTTAGA              ]
[+] EMBL CD096463             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GGAGCACCTGCTCCT ACTCTGCAGATTCGTCTAAGAGCATGGCCTGAAGGTGGATATTCTCCCTATGATACACCGTCTCCACGTGGGGAGATTCTTTTATCTGGTAAACCGGTTTCTCGAGGTTATTACAAACAGCCTGAATTGACAGCTAGAGATTTCATAACCGATCAAGACGGTACACGTTGGTTTTGTACTGGGGATATTGGCTTAATGCATACAGATGGAAGTTTATCAATAATTGACCGTAAAAAAGATCTTGTTAAACTACAAGCTGGGGAATATGTTTCCCTTAGCAAAGTTGAAATGGCTCTTAGTCAATCAGCCTATGTTGAACAAATTTGTGTTTATGTGGACCCGATGCAAAATTATCCAATCTGTTTCGTGTCACCGAAATTAAAATCGCTTATTGACTTAGCAGAATCTTTGAACTTAGTCCACTTACTACATGAAGCTCGTTCAAAACTTCCTATAGAATCAATGAAGGATTCCATCGCTATCGAACATGTGGAACGAGCTGTTCTCTGTANACACCCTCAAATTATACAAGCTGTGTTAAAAGATTTACAACGAGTTGCTAGAGAGAAACGTTTAAGCACGTTTGAAATACCACANAAAGTCGCTTTAGATACT          ]
[+] EMBL CD096381             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GGAGCACCTGCTCCT ACTCTGCAGATTCGGCTAAGAGCATGGCCTGAAGGTGGATATTCTCCCTATGATACACCGTCTCCACGTGGGGAGATTCTTTTATCTGGTAAACCGGCTTCTCGAGGTTAATACAAACAGCCTGAATTGACAGCTAGAGATTTCATAACCGATCAAGACGGTACACGTTGGGTTTGTACTGGGGATATTGGCTTAATGCATACAGATGGAAGTTTATCAATAATTGACCGTAAAAAACACCTTGTTAAACTACAAGCTGGGGAATATGTTTCCCTTAGCAAAGTTGAAATGGCTCTTACTCAATCACCCTATGTTGAACAAAT                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD166244             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AAGATCTTGTTAAACTACAAGCTGGGGAATATGTTTCCCTTAGCAAAGTTGAAATGGCTCTTAGTCAATCAGCCTATGTTGAACAAATTTGTGTTTATGTGGACCCGATGCAAAATTATCCAATCTGTTTCGTGTCACCGAAATTAAAATCGCTTATTGACTTAGCAGAATCTTTGAACTTAGTCCACTTACTACATGAAGCTCGTTCAAAACTTCCTATAGAATCAATGAAGGATTCCATCGCTATCGAACATGTGGAACGAGCTGTTCTCTGTAAACACCCTCAAATTATACAAGCTGTGTTAAAAGATTTACAACGAGTTGCTAGAGAGAAACGTTTAAGCACGTTTGAAATACCACAAAAAGTCGCTTTAGATACTATA       ]
[+] EMBL CD147449             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTTGTTAAACTACAAGCTGGGGAATATGTTTCCCTTAGCAAAGTTGAAATGGCTCTTAGTCAATCAGCCTATGTTGAACAAATTTGTGTTTATGTGGACCCGATGCAAAATTATCCAATTTGTTTCGTGTCACCGAAATTAAAATCGCTTATTGACTTAGCAGAATCTTTGAACTTAGTCCACTTACTACATGAAGCTCGTTCAAAACTTCCTATAGAATCAATGAAGGATTCCATCGCTATCGAACATGTGGAACGAGCTGTTCTCTGTAAACACCCTCAAATTATACAAGCTGTGTTAAAAGATTTACAACGAGTTGCTAGAGAGAAACGTTTAAGCACGTTTGAAATACCACAAAAAGTCGCTTTAGATACTATAGCTTGGA]
[+] EMBL CD062171             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAAAACTTCCTATAGAATCAATGAAGGATTCCATCGCTATCGAACATGTGGAACGAGCTGTTCTCTGTAAACACCCTCAAATTATACAAGCTGTGTTAAAAGATTTACAACGAGTTACTAGAGAGAAACGTTTAAGCACGTTTGAAATACCACAAAAAGTCGCTTTAG               ]




>consensus_10954#0
TTAGATTTAGCTGTGATCATGTACACAAGTGGATCAACAGGTCAACCTAAAGGCGTTGAA
ATGACCCATGAAAATTTAGTAAGTGCCATAGCTGGTCATCTACAACGTTTACCGAAACTT
CGTAGTAATTACGACATATATATAGGATATTTACCACTAGCTCATGTTTTAGAGCTTACC
TGCGAATTATCCTGTGTCATTATGGGTGTACGAATTGGTTACTCGAATCCACAAACACTA
ACGGACACTTCATCCCGTATTAAACGAGATTACTGCTTAGGTGATGTCAGTCTTCTTCGA
CCTACTCTTTTTGCCAGTGTACCTACTGTATTAGAACGTATTTCTAAGGCTGTTTGGGAA
AAAGTGAACGCTGGCGGTGAATTTCTTCAAGCTCTCTTCAAATTTGCATATGCCTACAAA
TGCCGACGAATTCATGGTGGTTTTCCAAGTTTCCTCGTGGATCGGTTGATTTTCCGTAAG
GTTAGATCGCTCATGGGTGGACGAATTCGTTATATTGTTTGTGGTGGAGCACCATTATCA
GAAGATTCACAATTATTCACAAATATATGCATCGCACCTATTGTACAAGGTTATGGGCTT
ACTGAGTCATGTTCTACTGGCGCTTTGATGGAGTGTGGGGATCTGCGATGTAATCATTCT
GGAGCACCTGCTCCTACTCTGCAGATTCGTCTAAGAGCATGGCCTGAAGGTGGATATTCT
CCCTATGATACACCGTCTCCACGTGGGGAGATTCTTTTATCTGGTAAACCGGTTTCTCGA
GGTTATTACAAACAGCCTGAATTGACAGCTAGAGATTTCATAACCGATCAAGACGGTACA
CGTTGGTTTTGTACTGGGGATATTGGCTTAATGCATACAGATGGAAGTTTATCAATAATT
GACCGTAAAAAAGATCTTGTTAAACTACAAGCTGGGGAATATGTTTCCCTTAGCAAAGTT
GAAATGGCTCTTAGTCAATCAGCCTATGTTGAACAAATTTGTGTTTATGTGGACCCGATG
CAAAATTATCCAATCTGTTTCGTGTCACCGAAATTAAAATCGCTTATTGACTTAGCAGAA
TCTTTGAACTTAGTCCACTTACTACATGAAGCTCGTTCAAAACTTCCTATAGAATCAATG
AAGGATTCCATCGCTATCGAACATGTGGAACGAGCTGTTCTCTGTAAACACCCTCAAATT
ATACAAGCTGTGTTAAAAGATTTACAACGAGTTGCTAGAGAGAAACGTTTAAGCACGTTT
GAAATACCACAAAAAGTCGCTTTAGATACTATAGCTTGGA

consensusID : consensus_10954#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 406
fasta sequence

                              [CGAAGAGCCCAAAAAAAGATCTTGTTAAACTACAAGCTGGGGAATATGTTTCCCTTAGCAAAGTTGAAATGGCTCTTAGTCAATCAGCCTATGTTGAACAAATTTGTGTTTATGTGGACCCGATGCAAAATTATCCAATCTGTTTCGTGTCACCGAAATTAAAATCGCTTATTGACTTAGCAGAATCTTTGAACTTAGTCCACTTACTACATGAAGCTCGTTCAAAACTTCCTATAGAATCAATGAAGGATTCCATCGCTATCGAACATGTGGACCGAGCTGTTCTCTGTAAACACCCTCAAATTATACAAGCTGTGTTAAAAGATTTACAACGAGTTGCTAGAGAGAAACGTTTAAGCACGTTTGAAATACCACAAAAAGTCGCTTTAGATACTATAGCTTGGAC]

[-] EMBL CD147827             [CGAAGAGCCCAAAAAAAGATCTTGTTAAACTACAAGCTGGGGAATATGTTTCCCTTAGCAAAGTTGAAATGGCTCTTAGTCAATCAGCCTATGTTGAACAAATTTGTGTTTATGTGGACCCGATGCAAAATTATCCAATCTGTTTCGTGTCACCGAAATTAAAATCGCTTATTGACTTAGCAGAATCTTTGAACTTAGTCCACTTACTACATGAAGCTCGTTCAAAACTTCCTATAGAATCAATGAAGGATTCCATCGCTATCGAACATGTGGACCGAGCTGTTCTCTGTAAACACCCTCAAATTATACAAGCTGTGTTAAAAGATTTACAACGAGTTGCTAGAGAGAAACGTTTAAGCACGTTTGAAATACCACAAAAAGTCGCTTTAGATACTATAGCTTGGAC]




>consensus_10954#1
CGAAGAGCCCAAAAAAAGATCTTGTTAAACTACAAGCTGGGGAATATGTTTCCCTTAGCA
AAGTTGAAATGGCTCTTAGTCAATCAGCCTATGTTGAACAAATTTGTGTTTATGTGGACC
CGATGCAAAATTATCCAATCTGTTTCGTGTCACCGAAATTAAAATCGCTTATTGACTTAG
CAGAATCTTTGAACTTAGTCCACTTACTACATGAAGCTCGTTCAAAACTTCCTATAGAAT
CAATGAAGGATTCCATCGCTATCGAACATGTGGACCGAGCTGTTCTCTGTAAACACCCTC
AAATTATACAAGCTGTGTTAAAAGATTTACAACGAGTTGCTAGAGAGAAACGTTTAAGCA
CGTTTGAAATACCACAAAAAGTCGCTTTAGATACTATAGCTTGGAC

consensusID : consensus_10954#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 216
fasta sequence

                              [TCAGTCTTCTTCGACCTACTCTTTTTGCCAGTGTACCTACTGTATTAGAACGTATTTCTAAGGCTGTTTGGGAAAAAGTTTTTTCTGGCGGTGAATTTCTTCAAGCTCTGTGGGGATTTGCNTNTGCCTACAAATGCCGACGAATTCATGGTGGTTTTCCAAGTTTCCTCCCCCCTCGGTTGATTTTCCCCAGGTTAGATCGCTCATGGGTGGACG]

[+] EMBL CD122555             [TCAGTCTTCTTCGACCTACTCTTTTTGCCAGTGTACCTACTGTATTAGAACGTATTTCTAAGGCTGTTTGGGAAAAAGTTTTTTCTGGCGGTGAATTTCTTCAAGCTCTGTGGGGATTTGCNTNTGCCTACAAATGCCGACGAATTCATGGTGGTTTTCCAAGTTTCCTCCCCCCTCGGTTGATTTTCCCCAGGTTAGATCGCTCATGGGTGGACG]




>consensus_10954#2
TCAGTCTTCTTCGACCTACTCTTTTTGCCAGTGTACCTACTGTATTAGAACGTATTTCTA
AGGCTGTTTGGGAAAAAGTTTTTTCTGGCGGTGAATTTCTTCAAGCTCTGTGGGGATTTG
CNTNTGCCTACAAATGCCGACGAATTCATGGTGGTTTTCCAAGTTTCCTCCCCCCTCGGT
TGATTTTCCCCAGGTTAGATCGCTCATGGGTGGACG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10954#0      TTAGATTTAGCTGTGATCATGTACACAAGTGGATCAACAGGTCAACCTAAAGGCGTTGAA 60
consensus_10954#1      ------------------------------------------------------------
consensus_10954#2      ------------------------------------------------------------
                                                                                   

consensus_10954#0      ATGACCCATGAAAATTTAGTAAGTGCCATAGCTGGTCATCTACAACGTTTACCGAAACTT 120
consensus_10954#1      ------------------------------------------------------------
consensus_10954#2      ------------------------------------------------------------
                                                                                   

consensus_10954#0      CGTAGTAATTACGACATATATATAGGATATTTACCACTAGCTCATGTTTTAGAGCTTACC 180
consensus_10954#1      ------------------------------------------------------------
consensus_10954#2      ------------------------------------------------------------
                                                                                   

consensus_10954#0      TGCGAATTATCCTGTGTCATTATGGGTGTACGAATTGGTTACTCGAATCCACAAACACTA 240
consensus_10954#1      ------------------------------------------------------------
consensus_10954#2      ------------------------------------------------------------
                                                                                   

consensus_10954#0      ACGGACACTTCATCCCGTATTAAACGAGATTACTGCTTAGGTGATGTCAGTCTTCTTCGA 300
consensus_10954#1      ------------------------------------------------------------
consensus_10954#2      ------------------------------------------------------------
                                                                                   

consensus_10954#0      CCTACTCTTTTTGCCAGTGTACCTACTGTATTAGAACGTATTTCTAAGGCTGTTTGGGAA 360
consensus_10954#1      ------------------------------------------------------------
consensus_10954#2      ------------------------------------------------------------
                                                                                   

consensus_10954#0      AAAGTGAACGCTGGCGGTGAATTTCTTCAAGCTCTCTTCAAATTTGCATATGCCTACAAA 420
consensus_10954#1      ------------------------------------------------------------
consensus_10954#2      ------------------------------------------------------------
                                                                                   

consensus_10954#0      TGCCGACGAATTCATGGTGGTTTTCCAAGTTTCCTCGTGGATCGGTTGATTTTCCGTAAG 480
consensus_10954#1      ------------------------------------------------------------
consensus_10954#2      ------------------------------------------------------------
                                                                                   

consensus_10954#0      GTTAGATCGCTCATGGGTGGACGAATTCGTTATATTGTTTGTGGTGGAGCACCATTATCA 540
consensus_10954#1      ------------------------------------------------------------
consensus_10954#2      ------------------------------------------------------------
                                                                                   

consensus_10954#0      GAAGATTCACAATTATTCACAAATATATGCATCGCACCTATTGTACAAGGTTATGGGCTT 600
consensus_10954#1      ------------------------------------------------------------
consensus_10954#2      ------------------------------------------------------------
                                                                                   

consensus_10954#0      ACTGAGTCATGTTCTACTGGCGCTTTGATGGAGTGTGGGGATCTGCGATGTAATCATTCT 660
consensus_10954#1      ------------------------------------------------------------
consensus_10954#2      ------------------------------------------------------------
                                                                                   

consensus_10954#0      GGAGCACCTGCTCCTACTCTGCAGATTCGTCTAAGAGCATGGCCTGAAGGTGGATATTCT 720
consensus_10954#1      ------------------------------------------------------------
consensus_10954#2      ------------------------------------------------------------
                                                                                   

consensus_10954#0      CCCTATGATACACCGTCTCCACGTGGGGAGATTCTTTTATCTGGTAAACCGGTTTCTCGA 780
consensus_10954#1      ------------------------------------------------------------
consensus_10954#2      ------------------------------------------------------------
                                                                                   

consensus_10954#0      GGTTATTACAAACAGCCTGAATTGACAGCTAGAGATTTCATAACCGATCAAGACGGTACA 840
consensus_10954#1      ------------------------------------------------------------
consensus_10954#2      ------------------------------------------------------------
                                                                                   

consensus_10954#0      CGTTGGTTTTGTACTGGGGATATTGGCTTAATGCATACAGATGGAAGTTTATCAATAATT 900
consensus_10954#1      -------------------------------------------------------CGAAG 5
consensus_10954#2      ------------------------------------------------------------
                                                                                   

consensus_10954#0      GACCGTAAAAAAGATCTTGTTAAACTACAAGCTGGGGAATATGTTTCCCTTAGCAAAGTT 960
consensus_10954#1      AGCCCAAAAAAAGATCTTGTTAAACTACAAGCTGGGGAATATGTTTCCCTTAGCAAAGTT 65
consensus_10954#2      ------------------------------------------------------------
                                                                                   

consensus_10954#0      GAAATGGCTCTTAGTCAATCAGCCTATGTTGAACAAATTTGTGTTTATGTGGACCCGATG 1020
consensus_10954#1      GAAATGGCTCTTAGTCAATCAGCCTATGTTGAACAAATTTGTGTTTATGTGGACCCGATG 125
consensus_10954#2      ------------------TCAGTCTTCTTCGACCTACTCTTTTTGCCAGTGTACCTACTG 42
                                         **** **   * ** * * * * * *    *** ***   **

consensus_10954#0      CAAAATTATCCAATCTGTTTCGTGTCACCGAAATTAAAATCGCTTATTGACTTAGCAGAA 1080
consensus_10954#1      CAAAATTATCCAATCTGTTTCGTGTCACCGAAATTAAAATCGCTTATTGACTTAGCAGAA 185
consensus_10954#2      TA---TTAGAACGTATTTCTAAGGCTGTTTGGGAAAAAGTTTTTTCTGGCGGTG--AATT 97
                        *   ***     * * * *   *           *** *   ** * *   *   *   

consensus_10954#0      TCTTTGAACTTAGTCCACTTACTACATGAAGCTCGTTCAAAACTTCCTATAGAATCAATG 1140
consensus_10954#1      TCTTTGAACTTAGTCCACTTACTACATGAAGCTCGTTCAAAACTTCCTATAGAATCAATG 245
consensus_10954#2      TCTTCAAGCTCTGTGGGGAT-TTGCNT-----NTGCCTACAAATGCCGAC-GAATTCATG 150
                       ****  * **  **     *  * * *       *   * ** * ** *  ****  ***

consensus_10954#0      AAGGATTCCATCGCTATCGAACATGTGGAACGAGCTGTTCTCTGTAAACACCCTCA-AAT 1199
consensus_10954#1      AAGGATTCCATCGCTATCGAACATGTGGACCGAGCTGTTCTCTGTAAACACCCTCA-AAT 304
consensus_10954#2      GTGGTTTTCCAAGTTTCCTCCCCCCTCGGTTGATTTTCCCCAGGTTAGATCGCTCATGGG 210
                         ** ** *   * *  *   *   * *   **  *   *   ** *   * ****    

consensus_10954#0      TATACAAGCTGTGTTAAAAGATTTACAACGAGTTGCTAGAGAGAAACGTTTAAGCACGTT 1259
consensus_10954#1      TATACAAGCTGTGTTAAAAGATTTACAACGAGTTGCTAGAGAGAAACGTTTAAGCACGTT 364
consensus_10954#2      TGGACG------------------------------------------------------ 216
                       *  **                                                       

consensus_10954#0      TGAAATACCACAAAAAGTCGCTTTAGATACTATAGCTTGGA- 1300
consensus_10954#1      TGAAATACCACAAAAAGTCGCTTTAGATACTATAGCTTGGAC 406
consensus_10954#2      ------------------------------------------