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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10960#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 25 consensus length = 1076 fasta sequence
[AACTTGAAATATGATGTTACATTAATGGTCTTTGCTCAAGATGGTGGAGCGATTACATCTATCGGTTTTAGAAGTGGTTCACATGGTTTGCAAAATCCTACAAATGTTGATGAGAAGGGTAGGATCACTTTGCTACCTGATGACAATAATGATGTTTATTTGATTACTGGTTGTGAGACAGGATATATCAACTGTTGGAAACTTCAAAATAATGGAAAAAGTAGATCAGTTGGCGAAGCTCGCAACTTACATTGGGGTAGTGTAATAACCATATATTGCATTCCTGGAGGTGATGGTGCCAGTGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTC-GATCGGTCTGACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATATTATTTTGGCCCGGGAGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGG-AAAAGATGGCGTACTTCGTATA-TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA-CAGAGATTACCGT-GGTTACTACC-TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT-GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG--AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTATTCGAATGGAGATGTCTTCAAG-TTTAATATGCAGTCTGGTTTGGAGCGTGGTTCATATGGTTCACCTACCGCTCATTTCTGCTCTATTGTTGGATTAGCTGTCAATAATGTAAACCGAGTTACTATAACTGTTGGTGAGAGTGAAATTCGTTTCTGGTCTTTTCACGAGCACAAGTTACGTGGACAACTTGACTTACCATCAACCTCTTTGTTAGTCAGATTTCATGCTGATAG]
[+] EMBL CD191139 [AACTTGAAATATGATGTTACATTAATGGTCTTTGCTCAAGATGGTGGAGCGATTACATCTATCGGTTTTAGAAGTGGTTCACATGGTTTGCAAAATCCTACAAATGTTGATGAGAAGGGTAGGATCACTTTGCTACCTGATGACAATAATGATGTTTATTTGATTACTGGTTGTGAGACAGGATATATCAACTGTTGGAAGCTTCAAAATAATGGAAAAAGTAGATCAGTTGGCGAAGCTCGCAACTTACATTGGGGTAGTGTAATAACCATATAT ]
[+] EMBL CD160623 [ GGAGCGATTACATCTATCGGTTTTAGAAGTGGTTCACATGGTTTGCAAAATCCTACAAATGTTGATGAGAAGGGTAGGATCACTTTGCTACCTGATGACAATAATGATGTTTATTTGATTACTGGTTGTGAGACAGGATATATCAACTGTTGGAAACTTCAAAATAATGGAAAAAGTAGATCAGTTGGCGAAGCTCGCAACTTACATTGGGGTAGTGTAATAACCATATATTGCATTCCTGGAGGTGATGGTGCCAGTGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTC GATCGGTCTGACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATATTATTTTGGg ]
[+] EMBL AI977676 [ GACAGGATATATCAACTGTTGGAAACTTCAAAATAATGGAAAAAGTAGATCAGTTGGCGAAGCTCGCAACTTACATTGGGGTAGTGTAATAACCATATATTGCATTCCTGGAGGTGATGGTGCCAGTGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTC GATCGGTCTGACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATATTATTTTGGCCCGGTAGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGA ]
[+] EMBL AI977675 [ GACAGGATATATCAACTGTTGGAAACTTCAAAATAATGGAAAAAGTAGATCAGTTGGCGAAGCTCGCAACTTACATTGGGGTAGTGTAATAACCATATATTGCATTCCTGGAGGTGATGGTGCCAGTGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTC GATCGGTCTGACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATATTATTTTGGCCCGGTAGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTC ]
[-] EMBL CD127464 [ TGGCGAAGCTCGCACTTTACATTGGGGTAGTGTAATAACCATATATTGCATTCCTGGAGGTGATGGTGCCAGTGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTC GATCGGTCTGACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATATTATTTTGGCCCGGGAGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTATTCGAATGGAGATGTCTTCAAG TTTAATATGCAGTCTGGTTTGGAGCGTGGTTC ]
[-] EMBL CD132123 [ GGCGAAGCTCGCAACTTACATTGGGGTAGTGTAATAACCATATATTGCATTCCTGGAGGTGATGGTGCCAGTGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTC GATCGGTCTGACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATATTATTTTGGCCCGGGAGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGC ]
[+] EMBL CD127346 [ ccgcgctcTAACCATATATTGTGTTCCTGGATGTGATGGGGCCAATGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTC GATCGGTCTGACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATATTATTTTGGCCCGGGAGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATCTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTATTCGAATGGAGATGTCTTCAAG TTTAATATGCAGTCTGGTTTGGAGCGTGGTT ]
[-] EMBL CD114444 [ AATTGTATGAAGGTTT TTGGGTCGGATCGGTCTGGCGGTAGGCCACGTCCAATATATCGTGGAATAGGTCATTCTCGACCTCTGAATAGAATAATAATAGGACCCGGAAGTTCAGCGGGTGGTGGGTTATTCGTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TCCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCTTGGAGTTCCGGAGCTCCGGAAAACTACTCGTCAA CAGAGATTGCCGT GGTTACTACA TAATGTGGTCCACATGGCTGCATGTTCTACACGTGCT AAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCGGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGCCAAATTGTGGTAAATATGCTCTCATTGGTTATTCGAATGGAGATGTATTCAAGATTTAATAGGCAGTCTGGTTTGGAGCGTGGTTCATATGGTT ]
[+] EMBL CD115748 [ AGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGA ]
[-] EMBL CD089760 [ acatcCAGCGGGTGGTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGATAGAGGCGTGGGATAGTGTGGTTACAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTGAGATTTCATGGATGCGATGATGAA ]
[-] EMBL CD111163 [ acatcCAGCGGGTGTTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTATTCGAATGGAGATGTC ]
[+] EMBL CD118959 [ GTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTA ]
[+] EMBL CD118936 [ GTGGGTTATTACTTGGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAGAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTA ]
[+] EMBL CD119160 [ GTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTA ]
[+] EMBL CD118963 [ GTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTA ]
[+] EMBL CD118992 [ gaTGGGTTATTACTTAGCGCCGGCAAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAGAACTACTCGTCAA CAGAGATTACCGT GGTTACTACCATGATGTGGTCCACATGGTTGCTTGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACGGAAGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTA ]
[-] EMBL CD119142 [ TGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTAT ]
[-] EMBL CD119147 [ TGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTAT ]
[-] EMBL CD119288 [ TGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTAT ]
[-] EMBL CD119118 [ TGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTT GAAAATTTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTAT ]
[-] EMBL CD119228 [ TGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTAT ]
[-] EMBL CD119162 [ TGGGTTATTACTCAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATAAGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTAT ]
[-] EMBL CD148167 [ TACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATATAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAACCAGAGATTACCGTGGGTTACTACC TGATGTGGTCCACATGGC ]
[+] EMBL CD116002 [ TATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTATTCGAATGGAGATGTCTTCAAG TTTAATATGCAGTCTGGTTTGGAGCGTGGTTCATATGGTTCACCTACCGCTCATTTCTGCTCTATTGTTGGATTAGCTGTCAATAATGTAAACCGAGTTACTATAACTGTTGGTGAGAGTGAAATTCGTTTCTGGTCTTTTCACGAGCACAAGTTACGTGGACAACTTGACTTACCATCAACCTCTTTGTTAGTCAGATTTCATGCTGATAG]
[-] EMBL CD192414 [ GGCGTGGGATAGTGTGGTTGCGATCCATAGCGGGAAACGGCAAGTAACG AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTAT ]
consensusID : consensus_10960#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 268 fasta sequence
[GCTTCTTGTATGAATCTCACTTCGAATAATAGTAACAATGAATGCATTAATAATAATAATACTACTACTACTACTACTGATAATGAGTTTATTTTACCTGAATTTATCACTTTATTAAAATCAAACCCCAATGATCAACATTTATTGTGTACATCAAAAAATAGTAAACTGGATGAGACAATGTTGACCTCGGGTAGCTTTCGCGAAATTCCAGCTCGTTACTTGCCGTTTCCCGCTATGGATTGCAACCACACTATCCCACGCCTCA]
[+] EMBL CD192569 [GCTTCTTGTATGAATCTCACTTCGAATAATAGTAACAATGAATGCATTAATAATAATAATACTACTACTACTACTACTGATAATGAGTTTATTTTACCTGAATTTATCACTTTATTAAAATCAAACCCCAATGATCAACATTTATTGTGTACATCAAAAAATAGTAAACTGGATGAGACAATGTTGACCTCGGGTAGCTTTCGCGAAATTCCAGCTCGTTACTTGCCGTTTCCCGCTATGGATTGCAACCACACTATCCCACGCCTCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10960#0 AACTTGAAATATGATGTTACATTAATGGTCTTTGCTCAAGATGGTGGAGCGATTACATCT 60
consensus_10960#1 ------------------------------------------------------------
consensus_10960#0 ATCGGTTTTAGAAGTGGTTCACATGGTTTGCAAAATCCTACAAATGTTGATGAGAAGGGT 120
consensus_10960#1 ------------------------------------------------------------
consensus_10960#0 AGGATCACTTTGCTACCTGATGACAATAATGATGTTTATTTGATTACTGGTTGTGAGACA 180
consensus_10960#1 ------------------------------------------------------------
consensus_10960#0 GGATATATCAACTGTTGGAAACTTCAAAATAATGGAAAAAGTAGATCAGTTGGCGAAGCT 240
consensus_10960#1 ------------------------------------------------------------
consensus_10960#0 CGCAACTTACATTGGGGTAGTGTAATAACCATATATTGCATTCCTGGAGGTGATGGTGCC 300
consensus_10960#1 ------------------------------------------------------------
consensus_10960#0 AGTGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTCGATCGGTCT 360
consensus_10960#1 ------------------------------------------------------------
consensus_10960#0 GACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATA 420
consensus_10960#1 ------------------------------------------------------------
consensus_10960#0 TTATTTTGGCCCGGGAGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGGAAAAGATGGC 480
consensus_10960#1 ------------------------------------------------------------
consensus_10960#0 GTACTTCGTATATTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATAT 540
consensus_10960#1 ------------------------------------------------------------
consensus_10960#0 GCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAACAGAGATTACCGTGGTTACTA 600
consensus_10960#1 ------------------------------------------------------------
consensus_10960#0 CCTGATGTGGTCCACATGGCTGCATGTTCTACACGTGCTGAGGCGTGGGATAGTGTGGTT 660
consensus_10960#1 ------------------------------------------------------------
consensus_10960#0 GCAATCCATAGCGGGAAACGGCAAGTAACGAGCTGGAATTTCGCGAAAGCTACCCGAGGT 720
consensus_10960#1 ------------------------------------------------------------
consensus_10960#0 CAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTAC 780
consensus_10960#1 ------------------------------------GCTTCTTGTATGAATC--TCACTT 22
* * * **** *
consensus_10960#0 AAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGT 840
consensus_10960#1 CGAATAATAGTAACAATGAATGCATT-------AATAATAATAATACTACTACTACTACT 75
* ** *** * * * ****** *** * *** * ** * * *
consensus_10960#0 TATTCGAATGGAGATGTCTTCAAGTTTAATATGCAGTCTGGTTTGGAGCGTGGTTCATAT 900
consensus_10960#1 ACTGATAATGAGTTTATTTT--ACCTGAATTTATCACTTTATTAAAATCAAACCCCA-AT 132
* **** * * ** * * *** * * ** * * ** **
consensus_10960#0 GGTTCACCTACCGCTCATTTCTGCTCTATTGTTGGATTAGCTGTCAATAATGTAAACCGA 960
consensus_10960#1 GATCAACATTTATTGTGTACATCAAAAAATAGTAAACTGGATGA-GACAATGTTGACCTC 191
* * ** * * * * * * * * * ** * ***** ***
consensus_10960#0 GTTACTATAACTGTTGGTGAGAGTGAAATTCGTTTCTGGTCTTTTCACGAGCACAAGTTA 1020
consensus_10960#1 GG----GTAGCT-TTCGCGAAATTCCAGCTCGTTACTTGCCGTTTCCCGC-TATGGATTG 245
* ** ** ** * ** * * * ***** ** * * **** ** * **
consensus_10960#0 CGTGGACAACTTGACTTACCATCAACCTCTTTGTTAGTCAGATTTCATGCTGATAG 1076
consensus_10960#1 CAACCACACTATCCCACGCC-TCA-------------------------------- 268
* *** * * ** ***
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||