cluster # 10960

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Schistosoma mansoni
cluster # 10960 cluster # 10960 Sequences # 26 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10960#0 length = 1076 sequences # 25

consensus_10960#1 length = 268 sequences # 1

consensusID : consensus_10960#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 25
consensus length = 1076
fasta sequence

                              [AACTTGAAATATGATGTTACATTAATGGTCTTTGCTCAAGATGGTGGAGCGATTACATCTATCGGTTTTAGAAGTGGTTCACATGGTTTGCAAAATCCTACAAATGTTGATGAGAAGGGTAGGATCACTTTGCTACCTGATGACAATAATGATGTTTATTTGATTACTGGTTGTGAGACAGGATATATCAACTGTTGGAAACTTCAAAATAATGGAAAAAGTAGATCAGTTGGCGAAGCTCGCAACTTACATTGGGGTAGTGTAATAACCATATATTGCATTCCTGGAGGTGATGGTGCCAGTGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTC-GATCGGTCTGACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATATTATTTTGGCCCGGGAGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGG-AAAAGATGGCGTACTTCGTATA-TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA-CAGAGATTACCGT-GGTTACTACC-TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT-GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG--AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTATTCGAATGGAGATGTCTTCAAG-TTTAATATGCAGTCTGGTTTGGAGCGTGGTTCATATGGTTCACCTACCGCTCATTTCTGCTCTATTGTTGGATTAGCTGTCAATAATGTAAACCGAGTTACTATAACTGTTGGTGAGAGTGAAATTCGTTTCTGGTCTTTTCACGAGCACAAGTTACGTGGACAACTTGACTTACCATCAACCTCTTTGTTAGTCAGATTTCATGCTGATAG]

[+] EMBL CD191139             [AACTTGAAATATGATGTTACATTAATGGTCTTTGCTCAAGATGGTGGAGCGATTACATCTATCGGTTTTAGAAGTGGTTCACATGGTTTGCAAAATCCTACAAATGTTGATGAGAAGGGTAGGATCACTTTGCTACCTGATGACAATAATGATGTTTATTTGATTACTGGTTGTGAGACAGGATATATCAACTGTTGGAAGCTTCAAAATAATGGAAAAAGTAGATCAGTTGGCGAAGCTCGCAACTTACATTGGGGTAGTGTAATAACCATATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD160623             [                                             GGAGCGATTACATCTATCGGTTTTAGAAGTGGTTCACATGGTTTGCAAAATCCTACAAATGTTGATGAGAAGGGTAGGATCACTTTGCTACCTGATGACAATAATGATGTTTATTTGATTACTGGTTGTGAGACAGGATATATCAACTGTTGGAAACTTCAAAATAATGGAAAAAGTAGATCAGTTGGCGAAGCTCGCAACTTACATTGGGGTAGTGTAATAACCATATATTGCATTCCTGGAGGTGATGGTGCCAGTGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTC GATCGGTCTGACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATATTATTTTGGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AI977676             [                                                                                                                                                                                GACAGGATATATCAACTGTTGGAAACTTCAAAATAATGGAAAAAGTAGATCAGTTGGCGAAGCTCGCAACTTACATTGGGGTAGTGTAATAACCATATATTGCATTCCTGGAGGTGATGGTGCCAGTGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTC GATCGGTCTGACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATATTATTTTGGCCCGGTAGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG  AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGA                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AI977675             [                                                                                                                                                                                GACAGGATATATCAACTGTTGGAAACTTCAAAATAATGGAAAAAGTAGATCAGTTGGCGAAGCTCGCAACTTACATTGGGGTAGTGTAATAACCATATATTGCATTCCTGGAGGTGATGGTGCCAGTGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTC GATCGGTCTGACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATATTATTTTGGCCCGGTAGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG  AGCTGGAATTTCGCGAAAGCTACCCGAGGTC                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD127464             [                                                                                                                                                                                                                                      TGGCGAAGCTCGCACTTTACATTGGGGTAGTGTAATAACCATATATTGCATTCCTGGAGGTGATGGTGCCAGTGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTC GATCGGTCTGACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATATTATTTTGGCCCGGGAGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG  AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTATTCGAATGGAGATGTCTTCAAG TTTAATATGCAGTCTGGTTTGGAGCGTGGTTC                                                                                                                                                                                    ]
[-] EMBL CD132123             [                                                                                                                                                                                                                                       GGCGAAGCTCGCAACTTACATTGGGGTAGTGTAATAACCATATATTGCATTCCTGGAGGTGATGGTGCCAGTGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTC GATCGGTCTGACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATATTATTTTGGCCCGGGAGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD127346             [                                                                                                                                                                                                                                                                 ccgcgctcTAACCATATATTGTGTTCCTGGATGTGATGGGGCCAATGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTC GATCGGTCTGACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATATTATTTTGGCCCGGGAGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG  AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATCTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTATTCGAATGGAGATGTCTTCAAG TTTAATATGCAGTCTGGTTTGGAGCGTGGTT                                                                                                                                                                                     ]
[-] EMBL CD114444             [                                                                                                                                                                                                                                                                                                                                       AATTGTATGAAGGTTT TTGGGTCGGATCGGTCTGGCGGTAGGCCACGTCCAATATATCGTGGAATAGGTCATTCTCGACCTCTGAATAGAATAATAATAGGACCCGGAAGTTCAGCGGGTGGTGGGTTATTCGTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TCCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCTTGGAGTTCCGGAGCTCCGGAAAACTACTCGTCAA CAGAGATTGCCGT GGTTACTACA TAATGTGGTCCACATGGCTGCATGTTCTACACGTGCT AAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG  AGCTGGAATTTCGCGAAAGCTACCGGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGCCAAATTGTGGTAAATATGCTCTCATTGGTTATTCGAATGGAGATGTATTCAAGATTTAATAGGCAGTCTGGTTTGGAGCGTGGTTCATATGGTT                                                                                                                                                                            ]
[+] EMBL CD115748             [                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG  AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGA                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD089760             [                                                                                                                                                                                                                                                                                                                                                                                                                                                   acatcCAGCGGGTGGTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGATAGAGGCGTGGGATAGTGTGGTTACAATCCATAGCGGGAAACGGCAAGTAACG  AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTGAGATTTCATGGATGCGATGATGAA                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD111163             [                                                                                                                                                                                                                                                                                                                                                                                                                                                   acatcCAGCGGGTGTTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG  AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTATTCGAATGGAGATGTC                                                                                                                                                                                                                           ]
[+] EMBL CD118959             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG  AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTA                                                                                                                                                                                                                                           ]
[+] EMBL CD118936             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTGGGTTATTACTTGGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG  AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAGAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTA                                                                                                                                                                                                                                           ]
[+] EMBL CD119160             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG  AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTA                                                                                                                                                                                                                                           ]
[+] EMBL CD118963             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG  AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTA                                                                                                                                                                                                                                           ]
[+] EMBL CD118992             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                gaTGGGTTATTACTTAGCGCCGGCAAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAGAACTACTCGTCAA CAGAGATTACCGT GGTTACTACCATGATGTGGTCCACATGGTTGCTTGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACGGAAGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTA                                                                                                                                                                                                                                           ]
[-] EMBL CD119142             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG  AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTAT                                                                                                                                                                                                                                          ]
[-] EMBL CD119147             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG  AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTAT                                                                                                                                                                                                                                          ]
[-] EMBL CD119288             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG  AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTAT                                                                                                                                                                                                                                          ]
[-] EMBL CD119118             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTT GAAAATTTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG  AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTAT                                                                                                                                                                                                                                          ]
[-] EMBL CD119228             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGGGTTATTACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG  AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTAT                                                                                                                                                                                                                                          ]
[-] EMBL CD119162             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGGGTTATTACTCAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATAAGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG  AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTAT                                                                                                                                                                                                                                          ]
[-] EMBL CD148167             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TACTTAGCGCCGG AAAAGATGGCGTACTTCGTATA TTCTCAACGTTCAACGAATATATGAATATAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAACCAGAGATTACCGTGGGTTACTACC TGATGTGGTCCACATGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD116002             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TATGAATAAAAGCCTCGGTTGCGCATATGCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAA CAGAGATTACCGT GGTTACTACC TGATGTGGTCCACATGGCTGCATGTTCTACACGTGCT GAGGCGTGGGATAGTGTGGTTGCAATCCATAGCGGGAAACGGCAAGTAACG  AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTATTCGAATGGAGATGTCTTCAAG TTTAATATGCAGTCTGGTTTGGAGCGTGGTTCATATGGTTCACCTACCGCTCATTTCTGCTCTATTGTTGGATTAGCTGTCAATAATGTAAACCGAGTTACTATAACTGTTGGTGAGAGTGAAATTCGTTTCTGGTCTTTTCACGAGCACAAGTTACGTGGACAACTTGACTTACCATCAACCTCTTTGTTAGTCAGATTTCATGCTGATAG]
[-] EMBL CD192414             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGCGTGGGATAGTGTGGTTGCGATCCATAGCGGGAAACGGCAAGTAACG  AGCTGGAATTTCGCGAAAGCTACCCGAGGTCAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTACAAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGTTAT                                                                                                                                                                                                                                          ]




>consensus_10960#0
AACTTGAAATATGATGTTACATTAATGGTCTTTGCTCAAGATGGTGGAGCGATTACATCT
ATCGGTTTTAGAAGTGGTTCACATGGTTTGCAAAATCCTACAAATGTTGATGAGAAGGGT
AGGATCACTTTGCTACCTGATGACAATAATGATGTTTATTTGATTACTGGTTGTGAGACA
GGATATATCAACTGTTGGAAACTTCAAAATAATGGAAAAAGTAGATCAGTTGGCGAAGCT
CGCAACTTACATTGGGGTAGTGTAATAACCATATATTGCATTCCTGGAGGTGATGGTGCC
AGTGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTCGATCGGTCT
GACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATA
TTATTTTGGCCCGGGAGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGGAAAAGATGGC
GTACTTCGTATATTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATAT
GCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAACAGAGATTACCGTGGTTACTA
CCTGATGTGGTCCACATGGCTGCATGTTCTACACGTGCTGAGGCGTGGGATAGTGTGGTT
GCAATCCATAGCGGGAAACGGCAAGTAACGAGCTGGAATTTCGCGAAAGCTACCCGAGGT
CAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTAC
AAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGT
TATTCGAATGGAGATGTCTTCAAGTTTAATATGCAGTCTGGTTTGGAGCGTGGTTCATAT
GGTTCACCTACCGCTCATTTCTGCTCTATTGTTGGATTAGCTGTCAATAATGTAAACCGA
GTTACTATAACTGTTGGTGAGAGTGAAATTCGTTTCTGGTCTTTTCACGAGCACAAGTTA
CGTGGACAACTTGACTTACCATCAACCTCTTTGTTAGTCAGATTTCATGCTGATAG

consensusID : consensus_10960#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 268
fasta sequence

                              [GCTTCTTGTATGAATCTCACTTCGAATAATAGTAACAATGAATGCATTAATAATAATAATACTACTACTACTACTACTGATAATGAGTTTATTTTACCTGAATTTATCACTTTATTAAAATCAAACCCCAATGATCAACATTTATTGTGTACATCAAAAAATAGTAAACTGGATGAGACAATGTTGACCTCGGGTAGCTTTCGCGAAATTCCAGCTCGTTACTTGCCGTTTCCCGCTATGGATTGCAACCACACTATCCCACGCCTCA]

[+] EMBL CD192569             [GCTTCTTGTATGAATCTCACTTCGAATAATAGTAACAATGAATGCATTAATAATAATAATACTACTACTACTACTACTGATAATGAGTTTATTTTACCTGAATTTATCACTTTATTAAAATCAAACCCCAATGATCAACATTTATTGTGTACATCAAAAAATAGTAAACTGGATGAGACAATGTTGACCTCGGGTAGCTTTCGCGAAATTCCAGCTCGTTACTTGCCGTTTCCCGCTATGGATTGCAACCACACTATCCCACGCCTCA]




>consensus_10960#1
GCTTCTTGTATGAATCTCACTTCGAATAATAGTAACAATGAATGCATTAATAATAATAAT
ACTACTACTACTACTACTGATAATGAGTTTATTTTACCTGAATTTATCACTTTATTAAAA
TCAAACCCCAATGATCAACATTTATTGTGTACATCAAAAAATAGTAAACTGGATGAGACA
ATGTTGACCTCGGGTAGCTTTCGCGAAATTCCAGCTCGTTACTTGCCGTTTCCCGCTATG
GATTGCAACCACACTATCCCACGCCTCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10960#0      AACTTGAAATATGATGTTACATTAATGGTCTTTGCTCAAGATGGTGGAGCGATTACATCT 60
consensus_10960#1      ------------------------------------------------------------
                                                                                   

consensus_10960#0      ATCGGTTTTAGAAGTGGTTCACATGGTTTGCAAAATCCTACAAATGTTGATGAGAAGGGT 120
consensus_10960#1      ------------------------------------------------------------
                                                                                   

consensus_10960#0      AGGATCACTTTGCTACCTGATGACAATAATGATGTTTATTTGATTACTGGTTGTGAGACA 180
consensus_10960#1      ------------------------------------------------------------
                                                                                   

consensus_10960#0      GGATATATCAACTGTTGGAAACTTCAAAATAATGGAAAAAGTAGATCAGTTGGCGAAGCT 240
consensus_10960#1      ------------------------------------------------------------
                                                                                   

consensus_10960#0      CGCAACTTACATTGGGGTAGTGTAATAACCATATATTGCATTCCTGGAGGTGATGGTGCC 300
consensus_10960#1      ------------------------------------------------------------
                                                                                   

consensus_10960#0      AGTGCAATGGTAACGTCTGGAACAGATAATTGTATAAAGGTTTCTTACTTCGATCGGTCT 360
consensus_10960#1      ------------------------------------------------------------
                                                                                   

consensus_10960#0      GACGGTAGTCCACGTACAATATATCGTCGAATAGGTCATTCTCGACCTCCGAATCGCATA 420
consensus_10960#1      ------------------------------------------------------------
                                                                                   

consensus_10960#0      TTATTTTGGCCCGGGAGTTCAGCGGGTGGTGGGTTATTACTTAGCGCCGGAAAAGATGGC 480
consensus_10960#1      ------------------------------------------------------------
                                                                                   

consensus_10960#0      GTACTTCGTATATTCTCAACGTTCAACGAATATATGAATAAAAGCCTCGGTTGCGCATAT 540
consensus_10960#1      ------------------------------------------------------------
                                                                                   

consensus_10960#0      GCTCCTGGAGTTCCGGAACGCCGGAAAACTACTCGTCAACAGAGATTACCGTGGTTACTA 600
consensus_10960#1      ------------------------------------------------------------
                                                                                   

consensus_10960#0      CCTGATGTGGTCCACATGGCTGCATGTTCTACACGTGCTGAGGCGTGGGATAGTGTGGTT 660
consensus_10960#1      ------------------------------------------------------------
                                                                                   

consensus_10960#0      GCAATCCATAGCGGGAAACGGCAAGTAACGAGCTGGAATTTCGCGAAAGCTACCCGAGGT 720
consensus_10960#1      ------------------------------------------------------------
                                                                                   

consensus_10960#0      CAACATTGGTTTGATCCACTAAAATTTCATGGATGCGATGATGAAGCAAATCGGTTGTAC 780
consensus_10960#1      ------------------------------------GCTTCTTGTATGAATC--TCACTT 22
                                                           * *  *      ****  *     

consensus_10960#0      AAGAAAACAGTTGCTACGTGTGCATTTTTGACAAATTGTGGTAACTATGCTCTCATTGGT 840
consensus_10960#1      CGAATAATAGTAACAATGAATGCATT-------AATAATAATAATACTACTACTACTACT 75
                          * ** ***  * * *  ******       ***  *  ***   * **   * *  *

consensus_10960#0      TATTCGAATGGAGATGTCTTCAAGTTTAATATGCAGTCTGGTTTGGAGCGTGGTTCATAT 900
consensus_10960#1      ACTGATAATGAGTTTATTTT--ACCTGAATTTATCACTTTATTAAAATCAAACCCCA-AT 132
                         *   ****    * * **  *  * *** *      *  **   * *      ** **

consensus_10960#0      GGTTCACCTACCGCTCATTTCTGCTCTATTGTTGGATTAGCTGTCAATAATGTAAACCGA 960
consensus_10960#1      GATCAACATTTATTGTGTACATCAAAAAATAGTAAACTGGATGA-GACAATGTTGACCTC 191
                       * *  ** *        *   *     * *  *  * * * **   * *****  ***  

consensus_10960#0      GTTACTATAACTGTTGGTGAGAGTGAAATTCGTTTCTGGTCTTTTCACGAGCACAAGTTA 1020
consensus_10960#1      GG----GTAGCT-TTCGCGAAATTCCAGCTCGTTACTTGCCGTTTCCCGC-TATGGATTG 245
                       *      ** ** ** * ** * *  *  ***** ** * * **** **   *    ** 

consensus_10960#0      CGTGGACAACTTGACTTACCATCAACCTCTTTGTTAGTCAGATTTCATGCTGATAG 1076
consensus_10960#1      CAACCACACTATCCCACGCC-TCA-------------------------------- 268
                       *    ***   *  *   ** ***