cluster # 10966

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Schistosoma mansoni
cluster # 10966 cluster # 10966 Sequences # 26 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10966#0 length = 1587 sequences # 25

consensus_10966#1 length = 125 sequences # 1

consensusID : consensus_10966#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 25
consensus length = 1587
fasta sequence

                              [TTTTTTTTTTTTTTTTCCAAGTTACGAAACATTTGTTTTGACAATAACCTAAATTACACAAGGCAACAAAAGATAATAATCAGCGTATACAGGTATAGATCTCCATCTTCATATGCAAAATGAAGTTTGTTGATATTCACTGGACAGGTTGGATTGTGACACCACGTCGAATTTCTCCCCATCCTATCAAACGCCAATGTCTTTCAACACGCCTGCTTAGTGCGATTTTTTCATCAACCTGAGTACAGACAGGACTATTTAGTCGTATTTTAGCTAGATCACCTTTAACAGCTATAACACAGCCACCACTAGAAAGAGACCCGATATTCACCATCAAAACTTCATTTTTAGAAAGCTTTTGAACCTTAGCACCTTTTTGGTCCCCTTCTGTGCGAACACCTAACAAACGTCGTAGAAGAAAGAACGATATTTCCAACTCCACATATATTTCAGGCAAGGTACCAACCTGTCCTAAAACATGTCCGACCAAACGATCAGCGCGACACAACTGTGGATCGATTTTCGTCCCGACTCCAATTAAACCTCCCGGAACAGCATAAGCAAGATCATTCTGCTCTGCGAACAGTGACACGATACATGAAATAATGGGTCTACAAGTAACACCTCCAGTCTCTGAATCTTT-CGAAACGAGACCTGGTCTAATTTCTA-TTTTTTGCCCAACCTTTAGAACCCCTCGCAAAATGCTCCCTCCAGCTACTCCACCTTGCAGATCATCCACTTCGCAACCAGGTTTGTTCACATCGAATG-ACCGGATAACAATCAAACGAGGTGCTGATGTAAAATCCCGTACTGGAACCGGAATGTGATTCACAATGTAATCACAAACAACATCAATATTATACTTCAATTGTGCTGAGATAGGTACAAC-TGGAGCTCCTTGAGCAACAGTACCCTGGATAAAACGTAAAATCTGTGAATATTGTTCGCGAGCCTGACTTTCCTTGATTAAGTCAATCTTATTTTGAAGAATAATTATGTATTTCAACTGCATGAT-CTCTACAGCAGCGAGATGCTCACTTGTTTGGGGCTGGGGGCATGTCTCATTGCTGGCTATCAACAATAATGCCGCATCCATAACAGCAGCACCGTTTAACATAGTTGCCATTAAAATATCATGACCTGGACAATCCACAAACGAAACATGCCTCAGCAATGTTAGTGTTCCATCACATCCCGGTCTAGGACAGGGAAGGGAATCATCTGTCGCACTTCCGAATGACCGATAACAAGCAGGGCGTATGCATGCTTCACTATTGCATTTGTATATCTTAGCATTAGCATATCCCAGCTTTATTGTGATGTTCCTGATCAATTCATTTTTGTGTCTAATGGTGTGCACTGTGGAAATTGC-ACGCACAACTGTTGTCTTTCCGTGGGCGACATGGCCTATGGTACCGATGTTTATGGTAGCCTGGCGACTGATGACCTCGGGCGATAANGCAGTTAGTTNTGAAACATCCAGTTCTTCTACATTCTGGACAGCCAAACCACGTTTGTCTGGCATTTACGACTACCGCCTTGNATTCAGATCGTTTATGGGAACAAAAGACAACACATGTAATTCGA]

[+] EMBL AI395471             [TTTTTTTTTTTTTTTTCCAAGTTACGAAACATTTGTTTTGACAATAACCTAAATTACACAAGGCAACAAAAGATAATAATCAGCGTATACAGGTATAGATCTCCATCTTCATATGCAAAATGAAGTTTGTTGATATTCACTGGACAGGTTGGATTGTGACACCACGTCGAATTTCTCCCCATCCTATCAAACGCCAATGTCTTTCAACACGCCTGCTTAGTGCGATTTTTTCATCAACCTGAGTACAGACAGGACTATTTAGTCGTATTTTAGCTAGATCACCTTTAACAGCTATAACACAGCCACCACTAGAAAGAGA CCGATATTCACCATCAAAAC TCATTTTTAGAAAGC TTTGAA CTTAGCA CTTTTTGGCCCCTTTCTGTGCGAACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD065440             [                                                                                                                                                                                                                      GCTTAGTGCGATTTTTTCATCAACCTGAGTACAGACAGGACTATTTAGTCGTATTTTAGCTAGATCACCTTTAACAGCTATAACACAGCCACCACTAGAAAGAGACCCGATATTCACCATCAAAACTTCATTTTTAGAAAGCTTTTGAACCTTAGGGACTTTTTGGTCCCCTTCTGTGCGAACACCTAACAAACGTCGTAGAAGACAGAACGATATTTCCAACTCCACATATATTTCAGGCAAGGTACCAAGCTGTCCTAAAACATGTCCGACCAAACGATCAGCGCGACACAACTGTGGATCGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD131067             [                                                                                                                                                                                                                                                             ACTATTTAGTCGTATTTNAGCTAGATCACCTTTAACAGCTATAACACAGCCACCACTAGAAAGAGACCCGATATTCACCATCAAAACTTCATTTTTAGAAAGCTTTTGAACCTTAGCACCTTTTTGGTCCCCTTCTGTGCGAACACCTAACAAACGTCGTAGAAGAAAGAACGATATTTCCAACTCCACATATATTTCAGGCAAGGTACCAACCTGTCCTAAAACATGTCCGACCAAACGATCAGCGCGACACAACTGTGGATCGATTTTCGTCCCGACTCCAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD066262             [                                                                                                                                                                                                                                                                                                CAGCTATAACACAGCCNCCACTAGAAAGAGACCCGATATTCACCATCAAAACTTCATTTTTAGAAAGCTTTTGAACCTTAGCACCTTTTTGGTCCCCTTCTGTGCGAACACCTAACAAACGTCGTAGAAGAAAGAACGATATTTCCAACTCCACATATATTTCAGGCAAGGTACCAACCTGTCCTAAAACATGTCCGACCAAACGATCAGCGCGACACAACTGTGGATCGATTTTCGTCCCGACTCCAATTAAACCTCCCGGAACAGCATAAGCAAGATCATTCTGCTCTGCGAACAGTGACACGATACATGAAATAATGGGTCTACAAGTAACACCTCCAGTCTCTGAATCTTT CGAAACGAGACCTGGTCTAATTTCTA TTTTTTGCCCAACCTTTAGAACCCCTCGCAAAATGCTCCCTCCAGCTACTCCACCTTGCAGATCATCCACTTCGCAACCAGGTTTGTTCACATCGAATG ACCGGATAACAATCAAACGAGGTGCTGATGTAAAATCCCGTACTGGAACCGGAATGTGATTCACAATGTAATCACAAACAACATCAATATTATACTTCAATTGTGCTGAGATAGGTACAAC TGGAGCTCCTTGAGCAACAGTACCCTGGATAAAACGTAAAATCTGTGAATATTGTTCGCGAGTCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD066207             [                                                                                                                                                                                                                                                                                                     ATAACACAGCCACCACTAGAAAGAGACCCGATATTCACCATCAAAACTTCATTTTTAGAAAGCTTTTGAACCTTAGCACCTTTTTGGTCCCCTTCTGTGCGAACACCTAACAAACGTCGTAGAAGAAAGAACGATATTTCCAACTCCACATATATTTCAGGCAAGGTACCAACCTGTCCTAAAACATGTCCGACCAAACGATCAGCGCGACACAACTGTGGATCGATTTTCGTCCCGACTCCAATTAAACCTCCCGGAACAGCATAAGCAAGATCATTCTGCCCTGCGAACGGTGACACGATACATGAAATAATGGGTCTACAAGTAACACCTCCAGTCTCTGAATCTTT CGAAACGAGACCTGGTCTAATTTCTATTTTTTTGCCCAACCTTTAGAACCCCTCGCAAAATGCTCCCTCCAGCTACTCCACCTTGCAGATCATCCACTTCGCAACCAGGTTTGTTCACATCGAATG ACCGGATAACAATCAAACGAGGTGCTGATGTAAAGTCCCGTACTGGAACCGGAATGTGATTCACAATGTAATCACAAACAACATCAATATTATACTTCAATTGTGCTGAGATAGGTACAAC TGGAGCTCCTTGAGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD066268             [                                                                                                                                                                                                                                                                                                                                                                           CCTTAGCACCTTTTTGGTCCCCTTCTGTGCGAACACCTAACAAACGTCGTAGAAGAAAGAACGATATTTCCAACTCCACATATATTTCAGGCAAGGTACCAACCTGTCCTAAAACATGTCCGACCAAACGATCAGCGCGACACAACTGTGGATCGATTTTCGTCCCGACTCCAATTAAACCTCCCGGAACAGCATAAGCAAGATCATTCTGCTCTGCGAACAGTGACACGATACATGAAATAATGGGTCTACAAGTAACACCTCCAGTCTCTGAATCTTT CGAAACGAGACCTGGTCTAATTTCTA TTTTTTGCCCAACCTTTAGAACCCCTCGCAAAATGCTCCCTCCAGCTACTCCACCTTGCAGATCATCCACTTCGCAACCAGGTTTGTTCACATCGAATG ACCGGATAACAATCAAACGAGGTGCTGATGTAAAATCCCGTACTGGAACCGGAATGTGATTCACAATGTAATCACAAACAACATCAATATTATACTTCAATTGTGCTGAGATAGGTACAAC TGGAGCTCCTTGAGCAACAGTACCCTGGATAAAACGTAAAATCTGTGAATATTGTTCGCGAGTCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD116078             [                                                                                                                                                                                                                                                                                                                                                                                                             ACCTAACAAACGTCGTAG AGAAAGAACGATA TTCCAACTCCACATATA TTCAGGCAAGGTACCAACCTGTCCTAAAACATGTCCGACCAAACGATCAGCGCGACACAACTGTGGATCGATTTTCGTCCCGACTCCAATTAAACCTCCCGGAACAGCATAAGCAAGATCATTCTGCTCTGCGAACAGTGACACGATACATGAAATAATGGGTCTACAAGTAACACCTCCAGTCTCTGAATCTTT CGAAACGAGACCTGGTCTAATTTCTA TTTTTTGCCCAACCTTTAGAACCCCTCGCAAAATGCTCCCTCCAGCTACTCCACCTTGCAGATCATCCACTTCGCAACCAGGTTTGTTCACATCGAATG ACCGGATAACAATCAAACGAGGTGCTGATGTAAAATCCCGTACTGGAACCGGAATGTGATTCACAATGTAATCACAAACAACATCAATATTATACTTCAATTGTGCTGAGATAGGTACAAC TGGAGCTCCTTGAGCAACAGTACCCTGGATAAAACGTAAAATCTGTGAATATTGTTCGCGAGCCTGACTTTCCTTGATTAAGTCAATCTTATTTTGAAGAATAATTATGTATTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD151978             [                                                                                                                                                                                                                                                                                                                                                                                                               CTAACAAACGTCGTAGAGAAAAGAACGATA TTCCAACTCCACATATATTTCAGGCAAGGTACCAACCTGTCCTAAAACATGTCCGACCAAACGATCAGCGCGACACAACTGTGGATCGATTTTCGTCCCGACTCCAATTAAACCTCCCGGAACAGCATAAGCAAGATCATTCTGCTCTGCGAACAGTGACACGATACATGAAATAATGGGTCTACAAGTAACACCTCCAGTCTCTGAATCTTT CGAAACGAGACCTGGTCTAATTTCTA TTTTTTGCCCAACCTTTAGAACCCCTCGCAAAATGCTCCCTCCAGCTACTCCACCTTGCAGATCATCCACTTCGCAACCAGGTTTGTTCACACAGAATGCAGC TATAACca                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD179695             [                                                                                                                                                                                                                                                                                                                                                                                                                                         tATATATCCAACTCCACATATATTTCAGGCAAGGTACCAACCTGTCTTAAAGCATGTCCGACCAAACGATCAGCGCGACACAACTGTGGATCGATTTTCGTCCCGACTCCAATTAAACCTCCCGGAACAGCATAAGCAAGATCATTCTGCTCTGCGAACAGTGACACGATACATGAAATAATGGGTCTACAAGTAACACCTCCAGTCTCTGAATCTTTNCGAAACGAGACCTGGTCTAATTTCTA TTTTTTGCCCAACCTTTAGAACCCCTCGCAAAATGCTCCCTCCAGCTACTCCACCTTGCAGATCATCCACTTCGCAACCAGGTTTGTTCACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD152475             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAACCTCCCGGAACAGCATAAGCAAGATCATTCTGCTTTGCGAACAGTGACACGATACATGAAATAATGGGTCTACAAGTGGCACCTCCAGTCTCTGAATCTTT CCAAACGAGACATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD199505             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTTGCAGATCATCCACTTCGCAACCAGGTTTGTTCACATCGAATG ACCGGATAACAATCAAACGAGGCGCTGATGTAAAATCCCGTACTGGAACCGGAATGTGATTCACAATGTAATCACAAACAACATCAATATTATACTTCAATTGTGCTGAGATAGGTACAAC TGGAGCTCCTTGAGCAACAGTACCCTGGATAAAACGTAAAATCTGTGAATATTGTTCGCGAGCCTGACTTTCCTTGATTAAGTCAATCTTATTTTGAAGAATAATTATGTATTTCAACTGCATGAT CTCTACAGCAGCGAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD163107             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GATCATCCACTTCGCAACCAGGTTTGTTCACATCGAATG ACCGGATAACAATCAAACGAGGTGCTGATGTAAAATCCCGTACTGGAACCGGAATGTGATTCACAATGTAATCACAAACAACATCAATATTATACTTCAATTGTGCTGAGATAGGTACAAC TGGAGCTCCTTGAGCAACAGTACCCTGGATAAAACGTAAAATCTGTGAATATTGTTCGCGAGCCTGACTTTCCTTGATTAAGTCAATCTTATTTTGAAGAATAATTATGTATTTCAACTGCATGAT CTCTACAGCAGCGAGATGCTCACTTGTTTGGGGCTGGGGGCATGTCTCATTGCTGGCTATCAACAATAATGCCGCATCCATAACAGCAGCACCGTTTAACATAGTTGCCATTAAAATATCATGACCTGGACAATCCACAAACGAAACATGCCTCAGCAATGTTAGTGTTCCATCACATC                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD163306             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GATCATCCACTTCGCAACCAGGTTTGTTCACATCGAATG ACCGGATAACAATCAAACGAGGTGCTGATGTAAAATCCCGTACTGGAACCGGAATGTGATTCACAATGTAATCACAAACAACATCAATATTATACTTCAATTGTGCTGAGATAGGTACAAC TGGAGCTCCTTGAGCAACAGTACCCTGGATAAAACGTAAAATCTGTGAATATTGTTCGCGAGCCTGACTTTCCTTGATTAAGTCAATCTTATTTTGAAGAATAATTATGTATTTCAACTGCATGAT CTCTACAGCAGCGAGATGCTCACTTGTTTGGGGCTGGGGGCATGTCTCATTGCTGGCTATCAACAATAATGCCGCATCCATAACAGCAGCACCGTTTAACATAGTTGCCATTAAAATATCATGACCTGGACAATCCACAAACGAAACATGCCTCAGCAATGTTAGTGTTCCATCACA                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD163354             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GATCATCCACTTCGCAACCAGGTTTGTTCACATCGAATG ACCGGATAACAATCAAACGAGGTGCTGATGTAAAATCCCGTACTGGAACCGGAATGTGATTCACAATGTAATCACAAACAACATCAATATTATACTTCAATTGTGCTGAGATAGGTACAAC TGGAGCTCCTTGAGCAACAGTACCCTGGATAAAACGTAAAATCTGTGAATATTGTTCGCGAGCCTGACTTTCCTTGATTAAGTCAATCTTATTTTGAAGAATAATTATGTATTTCAACTGCATGAT CTCTACAGCAGCGAGATGCTCACTTGTTTGGGGCTGGGGGCATGTCTCATTGCTGGCTATCAACAATAATGCCGCATCCATAACAGCAGCACCGTTTAACATAGTTGCCATTAAAATATCATGACCTGGACAATCCACAAACGAAACATGCCTCAGCAATGTTAGTGTT                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD163464             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATCATCCACTTCGCAACCAGGTTTGTTCACATCGAATG ACCGGATAACAATCAAACGAGGTGCTGATGTAAAATCCCGTACTGGAACCGGAATGTGATTCACAATGTAATCACAAACAACATCAGTATTATACTTCAATTGTGCTGAGATAGGTACAAC TGGAGCTCCTTGAGCAACAGTACTCTGGATAAAACGTAAAATCTGTGAATATTGTTCGCGAGCCTGACTTTCCTTGATTAAGTCAATCTTATTTTGAAGAATAATTATGTATTTCAACTGCATGAT CTCTACAGCAGCGAGATGCTCACTTGTTTGGGGCTGGGGGCATGTCTCATTGCTGGCTATCAACAATAATGCCGCATCCATAACAGCAGCACCGTTTAACATAGTTGCCATTAAAATATCATGACCTGGACAATCCACAAACGAAACATGCCTCAGCAATGTTAGTGTTCCATCACAT                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD199489             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CATCGAATG ACCGGATAACAATCAAACGAGGTGCTGATGTAAAATCCCGTACTGGAACCGGAATGTGATTCACAATGTAATCACAAACAACATCAATATTATACTTCAATTGTGCTGAGATAGGTACAAC TGGAGCTCCTTGAGCAACAGTACCCTGGATAAAACGTAAAATCTGTGAATATTGTTCGCGAGCCTGACTTTCCTTGATTAAGTCAATCTTATTTTGAAGAATAATTATGTATTTCAACTGCATGAT CTCTACAGCAGCGAGATGCTCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD070762             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATCGAATG ACCGGATACAAATCAAACGAGGTGCTGATGTAAAATCCCGTACTGGAACCGGAATGTGATTCACAATGTAATCACAAACAACATCAATATTATACTTCAATTGTGCTGAGATAGGTACAAC TGGAGCTCCTTGAGCAACAGTACCCTGGATAAAACGTAAAATCTGTGAATATTGTTCGCGAGCCTGACTTTCCTTGATTAAGTCAATCTTATTTTGAAGAATAATTATGTATTTCAACTGCATGATGCTATACAGCAGCGAGATGCTCACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD163410             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATCAAACGAGGTGCTGATGTAAAATCCCGTACTGGAACCGGAATGTGATTCACAATGTAATCACAAACAACATCAGTATTATACTTCAATTGTGCTGAGATAGGTACAAC TGGAGCTCCTTGAGCAACAGTACCCTGGATAAAACGTAAAATCTGTGAATATTGTTCGCGAGCCTGACTTTCCTTGATTAAGTCAATCTTATTTTGAAGAATAATTATGTATTTCAACTGCATGAT CTCTACAGCAGCGAGATGCTCACTTGTTTGGGGCTGGGGGCATGTCTCATTGCTGGCTATCAACAATAATGCCGCATCCATAACAGCAGCACCGTTTAACATAGTTGCCATTAAAATATCATGACCTGGACAATCCACAAACGAAACATGCCTCAGCAATGTTAGTGTTCCATCACAT                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD125822             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGAGGTGCTGATGTAAAATCCCGTACTGGAACCGGAATGTGATTCACAATGTAATCACAAACAACATCAATATTATACTTCAATTGTGCTGAGATAGGTACAACGTGGAGCTCCTTGAGCAACAGTACCCTGGATAAAACGTAAAATCTGTGAATATTGTTCGCGAGCCTGACTTTCCTTGATTAAGTCAATCTTATTTTGAAGAATAATTATGTATTTCAACTGCATGAT CTCTACAGCAGCGAGATGCTCACTTGTTTGGGGCTGGGGGCATGTCTCATTGCTGGCTATCAACAATAATGCCGCATCCATAACAGCAGCACCGTTTAACATAGTTGCCATTAAAATATCATGACCTGGACAATCCACAAACGAAACATGCCTCAGCAATGTTAGTGTTCCATCACATCCCGGTCTAGGACAGGGAAGGGAATCATCTGTCGCACTTCCGAATGACCGATAACAAGCAGGGCGTATGCATGCTTCACTATTGCATTTGTATATCTTAGCATTAGCATATCC                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD182051             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AATCTGTGAATATTGTTCGCGAGCCTGACTTTCCTTGATTAAGTCAATCTTATTTTGAAGAATAATTATGTATTTCAACTGCATGAT CTCTACAGCAGCGAGATGCTCACTTGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD115994             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCTGACTTTCCTTGATTAAGTCAATCTTATTTTGAAGAATAATTATGTATTTCAACTGCATGAT CTCTACAGCAGCGAGATGCTCACTTGTTTGGGGCTGGGGGCATGTCTCATTGCTGGCTATCAACAATAATGCCGCATCCATAACAGCAGCACCGTTTAACATAGTTGCCATTAAAATATCATGACCTGGACAATCCACAAACGTAACATGCCTCAGCAATGTTAGTGTTCCATCACATCCCGGTCTAGGACAGGGAAGGGAATCATCTGTCGCACTTCCGAATGACCGATAACAAGCAGGGCGTATGCATGCTTCACTATTGCATTTGTATATCTTAGCATTAGCATATCCCAGCTTTATTGTG                                                                                                                                                                                                                                                                             ]
[-] EMBL CD116228             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCTGACTTTCCTTGATTAAGTCAATCTTATTTTGAAGAATAATTATGTATTTCAACTGCATGAT CTCTACAGCAGCGAGATGCTCACTTGTTTGGGGCTGGGGGCATGTCTCATTGCTGGCTATCAACAATAATGCCGCATCCATAACAGCAGCACCGTTTAACATAGTTGCCATTAAAATATCATGACCTGGACAATCCACAAACGAAACATGCCTCAGCAATGTTAGTGTTCCATCACATGCCGGTCTAGGACAGGGAAGGGAATCATCTGTCGCACTTCCGAATGACCGATAACAAGCAGGGCGTATGCATGCTTCACTATTGCATTTGTATATCTTAGCATTAGCATATCCCAGCTTTATTGTG                                                                                                                                                                                                                                                                             ]
[+] EMBL CD133385             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATTAAGTCAATCTTATTTTGAAGAATAATTATGTATTTCAACTGCATGAT CTCTACAGCAGCGAGATGCTCACTTGTTTGGGGCTGGGGGCATGTCTCATTGCTGGCTATCAACAATAATGCCGCATCCATAACAGCAGCACCGTTTAACATAGTTGCCATTAAAATATCATGACCTGGACAATCCACAAACGAAACATGCCTCAGCAATGTTAGTGTTCCATCACATCCCGGTCTAGGACAGGGAAGGGAATCATCTGTCGCACTTCCGAATGACCGATAACAAGCAGGGCGTATGCATGCTTCACTATTGCATTTGTATATCTTAGCATTAGCATATCCCAGCTTTATTGTGATGTTCCTGATCAATTCATTTTTGTGTCTAATGGTGTGCACTGTGGAAATTGC ACGCACAACTGTTGTCTTTCCGTGGGCGACATGGCCTATGGTACCGATGTTTATGGTAGCCTGGCGACTGATGACCTCGGGCGATAANGCAGTTAGTTNTGAAACATCCAGTTCTTCTACATTCTGGACAGCCAAACCACGTTTGTCTGGCATTTACGACTACCGCCTTGNATTCAGATCGTTTATGGGAACAAAAGACAACACATGTAATTCGA]
[-] EMBL CD156420             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGCTCACTTGTTTGGGGCTGGGGGCATGTCTCATTGCTGGCTATCAACAATAATGCCGCATCCATAACAGCAGCACCGTTTAACATAGTTGCCATTAAAATATCATGACCTGGACAATCCACAAACGAAACATGCCTCAGCAATGTTAGTGTTCCATCACATCCCGGTCTAGGACAGGGAAGGGAATCATCTGTCGCACTTCCGAATGACCGATAACAAGCAGGGCGTATGCATGCTTCACTATT                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD181690             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGTATGCATGCTTCACTATTGCATTTGTATATCTTAGCAGTAGCATCTCCCAGCTTTATTGTGATGTTCCTGATCAATTCATTTTTGTGTCTAATGGTGTGCACTGTGGAAGATGCGACGCACAACTGTTG                                                                                                                                                                                                         ]




>consensus_10966#0
TTTTTTTTTTTTTTTTCCAAGTTACGAAACATTTGTTTTGACAATAACCTAAATTACACA
AGGCAACAAAAGATAATAATCAGCGTATACAGGTATAGATCTCCATCTTCATATGCAAAA
TGAAGTTTGTTGATATTCACTGGACAGGTTGGATTGTGACACCACGTCGAATTTCTCCCC
ATCCTATCAAACGCCAATGTCTTTCAACACGCCTGCTTAGTGCGATTTTTTCATCAACCT
GAGTACAGACAGGACTATTTAGTCGTATTTTAGCTAGATCACCTTTAACAGCTATAACAC
AGCCACCACTAGAAAGAGACCCGATATTCACCATCAAAACTTCATTTTTAGAAAGCTTTT
GAACCTTAGCACCTTTTTGGTCCCCTTCTGTGCGAACACCTAACAAACGTCGTAGAAGAA
AGAACGATATTTCCAACTCCACATATATTTCAGGCAAGGTACCAACCTGTCCTAAAACAT
GTCCGACCAAACGATCAGCGCGACACAACTGTGGATCGATTTTCGTCCCGACTCCAATTA
AACCTCCCGGAACAGCATAAGCAAGATCATTCTGCTCTGCGAACAGTGACACGATACATG
AAATAATGGGTCTACAAGTAACACCTCCAGTCTCTGAATCTTTCGAAACGAGACCTGGTC
TAATTTCTATTTTTTGCCCAACCTTTAGAACCCCTCGCAAAATGCTCCCTCCAGCTACTC
CACCTTGCAGATCATCCACTTCGCAACCAGGTTTGTTCACATCGAATGACCGGATAACAA
TCAAACGAGGTGCTGATGTAAAATCCCGTACTGGAACCGGAATGTGATTCACAATGTAAT
CACAAACAACATCAATATTATACTTCAATTGTGCTGAGATAGGTACAACTGGAGCTCCTT
GAGCAACAGTACCCTGGATAAAACGTAAAATCTGTGAATATTGTTCGCGAGCCTGACTTT
CCTTGATTAAGTCAATCTTATTTTGAAGAATAATTATGTATTTCAACTGCATGATCTCTA
CAGCAGCGAGATGCTCACTTGTTTGGGGCTGGGGGCATGTCTCATTGCTGGCTATCAACA
ATAATGCCGCATCCATAACAGCAGCACCGTTTAACATAGTTGCCATTAAAATATCATGAC
CTGGACAATCCACAAACGAAACATGCCTCAGCAATGTTAGTGTTCCATCACATCCCGGTC
TAGGACAGGGAAGGGAATCATCTGTCGCACTTCCGAATGACCGATAACAAGCAGGGCGTA
TGCATGCTTCACTATTGCATTTGTATATCTTAGCATTAGCATATCCCAGCTTTATTGTGA
TGTTCCTGATCAATTCATTTTTGTGTCTAATGGTGTGCACTGTGGAAATTGCACGCACAA
CTGTTGTCTTTCCGTGGGCGACATGGCCTATGGTACCGATGTTTATGGTAGCCTGGCGAC
TGATGACCTCGGGCGATAANGCAGTTAGTTNTGAAACATCCAGTTCTTCTACATTCTGGA
CAGCCAAACCACGTTTGTCTGGCATTTACGACTACCGCCTTGNATTCAGATCGTTTATGG
GAACAAAAGACAACACATGTAATTCGA

consensusID : consensus_10966#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 125
fasta sequence

                              [CATCGAATGACCGGATAACTGTGAATATTGTTCGCGAGCCTGACTTTCCTTGATTAAGTCAATCTTATTTTGAAGAATAATTATGTATTTCAACTGCATGATCTCTACAGCAGCGTGATGCTCAC]

[+] EMBL CD097592             [CATCGAATGACCGGATAACTGTGAATATTGTTCGCGAGCCTGACTTTCCTTGATTAAGTCAATCTTATTTTGAAGAATAATTATGTATTTCAACTGCATGATCTCTACAGCAGCGTGATGCTCAC]




>consensus_10966#1
CATCGAATGACCGGATAACTGTGAATATTGTTCGCGAGCCTGACTTTCCTTGATTAAGTC
AATCTTATTTTGAAGAATAATTATGTATTTCAACTGCATGATCTCTACAGCAGCGTGATG
CTCAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10966#0      TTTTTTTTTTTTTTTTCCAAGTTACGAAACATTTGTTTTGACAATAACCTAAATTACACA 60
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      AGGCAACAAAAGATAATAATCAGCGTATACAGGTATAGATCTCCATCTTCATATGCAAAA 120
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      TGAAGTTTGTTGATATTCACTGGACAGGTTGGATTGTGACACCACGTCGAATTTCTCCCC 180
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      ATCCTATCAAACGCCAATGTCTTTCAACACGCCTGCTTAGTGCGATTTTTTCATCAACCT 240
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      GAGTACAGACAGGACTATTTAGTCGTATTTTAGCTAGATCACCTTTAACAGCTATAACAC 300
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      AGCCACCACTAGAAAGAGACCCGATATTCACCATCAAAACTTCATTTTTAGAAAGCTTTT 360
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      GAACCTTAGCACCTTTTTGGTCCCCTTCTGTGCGAACACCTAACAAACGTCGTAGAAGAA 420
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      AGAACGATATTTCCAACTCCACATATATTTCAGGCAAGGTACCAACCTGTCCTAAAACAT 480
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      GTCCGACCAAACGATCAGCGCGACACAACTGTGGATCGATTTTCGTCCCGACTCCAATTA 540
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      AACCTCCCGGAACAGCATAAGCAAGATCATTCTGCTCTGCGAACAGTGACACGATACATG 600
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      AAATAATGGGTCTACAAGTAACACCTCCAGTCTCTGAATCTTTCGAAACGAGACCTGGTC 660
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      TAATTTCTATTTTTTGCCCAACCTTTAGAACCCCTCGCAAAATGCTCCCTCCAGCTACTC 720
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      CACCTTGCAGATCATCCACTTCGCAACCAGGTTTGTTCACATCGAATGACCGGATAACAA 780
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      TCAAACGAGGTGCTGATGTAAAATCCCGTACTGGAACCGGAATGTGATTCACAATGTAAT 840
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      CACAAACAACATCAATATTATACTTCAATTGTGCTGAGATAGGTACAACTGGAGCTCCTT 900
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      GAGCAACAGTACCCTGGATAAAACGTAAAATCTGTGAATATTGTTCGCGAGCCTGACTTT 960
consensus_10966#1      ------------CATCGAATGACCGGATAA-CTGTGAATATTGTTCGCGAGCCTGACTTT 47
                                   * * **   * ** * ** *****************************

consensus_10966#0      CCTTGATTAAGTCAATCTTATTTTGAAGAATAATTATGTATTTCAACTGCATGATCTCTA 1020
consensus_10966#1      CCTTGATTAAGTCAATCTTATTTTGAAGAATAATTATGTATTTCAACTGCATGATCTCTA 107
                       ************************************************************

consensus_10966#0      CAGCAGCGAGATGCTCACTTGTTTGGGGCTGGGGGCATGTCTCATTGCTGGCTATCAACA 1080
consensus_10966#1      CAGCAGCGTGATGCTCAC------------------------------------------ 125
                       ******** *********                                          

consensus_10966#0      ATAATGCCGCATCCATAACAGCAGCACCGTTTAACATAGTTGCCATTAAAATATCATGAC 1140
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      CTGGACAATCCACAAACGAAACATGCCTCAGCAATGTTAGTGTTCCATCACATCCCGGTC 1200
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      TAGGACAGGGAAGGGAATCATCTGTCGCACTTCCGAATGACCGATAACAAGCAGGGCGTA 1260
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      TGCATGCTTCACTATTGCATTTGTATATCTTAGCATTAGCATATCCCAGCTTTATTGTGA 1320
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      TGTTCCTGATCAATTCATTTTTGTGTCTAATGGTGTGCACTGTGGAAATTGCACGCACAA 1380
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      CTGTTGTCTTTCCGTGGGCGACATGGCCTATGGTACCGATGTTTATGGTAGCCTGGCGAC 1440
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      TGATGACCTCGGGCGATAANGCAGTTAGTTNTGAAACATCCAGTTCTTCTACATTCTGGA 1500
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      CAGCCAAACCACGTTTGTCTGGCATTTACGACTACCGCCTTGNATTCAGATCGTTTATGG 1560
consensus_10966#1      ------------------------------------------------------------
                                                                                   

consensus_10966#0      GAACAAAAGACAACACATGTAATTCGA 1587
consensus_10966#1      ---------------------------