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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10973#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 2183 fasta sequence
[TACATCCTCCTGTTAGTGATGTTGTCAATCATGGACATTATACAGATGATGAAAATATTGGAAATCCAATCCCTTATCGAGGTGCGAAACGTATGCCTCGCGAAGCATACGGTCACCGCAGTTCTGGTGGGTCAAAGAACTGCAGTGACTGGAACAGTGATCCTAGTCTATTTGTTGAGAAGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAAATATTCGTGCTGCAAGAGAGATTCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCGAATACAGTGCAAGAAACAATGACCCTATCGATAATTCTGGAGATTATGGTGAAGCTGCGATGTTTGTTATAGAAGCCAAGACTCCGGAAGCTGCAAAACAAGCTCGAGCTAAACTGGAATACTCTGAGCTGTATTTAGGTGTTCCACGTCGTTATGTAGGCCGTTTGATCGGGAAAAGAACCTCAAATATTATGTCCATTATTCGTAAATCTGGTGTTGTTCACATTCATTTCGATGATCATATCGAAGGCCCTGTATCTCTCAGCGATGATAATAACCAAACTGATGTTATCAAGTATTCCCATCCAGGGCGTCCTTTAGCAAGCACAATGCGACGAGTCTTTTTGAAGGCTGGAAGTGCTCAGACATCCTCGCAACCACATACAGATGAGGAATACGGTGGATTCATACTAGCTGGCACAAGGGACTCTATCGAAAAAGCTCGTTTGTTGATCAACTTCCAAATGGATTACTTCTACGATCTTGAAAAAATGGAGAGCGAAAAGCTGGAGTTAATGCGTAGTTTATCTCATGGTGGAGTGGACTCTGGTCCAGACTACCCACCTCGTGGTACGGTAGTCGGACGTTGGGGTGACCGCGGTGGTGTTGGGAATTATGGACGTGGTGGTCGCGGACGCAGACCAGGTCGTAGTGGTCTGTTACATCCTCCTGTTAGTGATGTTGTCAATCATGGACATTATACAGATGATGAAAATATTGGAAATCCAATCCCTTATCGAGGCGCGAAACGTATGCCTCGCGAAGCATACGGTCACCGCAGTTCTGGTGGAAGAATCCCACGTCAAAGTGGAAGAGGAAGTCGGCGAATGGGAGGTTCTGGTCGCGATCCTAATTGGAATAACCACATTAACAACAATGGAGATGTCGCTGACCGTCGTCGAGGCTCGAATGATTCGGATGTCTTAGAGTCTGACAACTTACCTGACGGTTTATCATCGGAACGGGCAAACGCTGGAAAACATAACAGGATAGGACGTCATTCTCCAGCTCCAAATGGATTTTATTCTGATAGAGAACGTGGGGACGAAAGTGAGGATACCCTTAATCCTAACAACGAAAACAATTTCCCTTGTGGTGATGCGTCTTCTGAAGACGGCGGGGGTTGTTCAGTTGACAATATGCGTTCAAGACTGAATAAATATGTACATAGTCGTCGTAACAGTAAATCACGCCCCCCACGTCGCTCACATCAAGATCGTCCTCAAAATTCCGACCAATGGGATACCAATTGTCAATTCAACAACGTCGATTCATCTCTCGGTAGTCAGAAATTGCGTAGTGCTGGTGGTAATTATTCTGCCAGACAGCAGTCGGTGCAAGTAGTATACCAGGAATAGAGTTCCTTGCACATTTTTACTGGATGTTTGTGTGTACCTCTTTAAGTTGAGTTAACGAAAAAACCTTGTGTATTACATTCTTATGTCTTCATTTCTT-GTTGTTGTTCGAATATTGTTTCTTTTGTTACTTTCCTGAAGT------TATATATATATATATGGTCTTATATCAACAGTGTTGTCTGCAAACGTTATTACCAATATCCAGTCTCATCTCGTTCATTTCGTATATAAGAATACGTTACACATGTTTATACAACTTTATGATATCTCAAACCTGTGATTAGCATGTATATCTTATGTGGTTCACTAGTTTGTTCACGCTCAAATAGCAGTACTTCATTTTAACCGATTCCAGTCTTTTCATCTAGTACCAAGATTTTTAAAAAATAAAAGGACAACCACTTCAGGTTTACTCATAAGCAACTGTTGTATCTCCATTTCTATAAAGATCTGTCACTTTTTAAGAATAATCACCTTTGAACTCATTACTTATCTACCCGTAACTGCGTTTTCCCATCTAAGTGTATTAACTAG]
[+] EMBL CD096517 [TACATCCTCCTGTTAGTGATGTTGTCAATCATGGACATTATACAGATGATGAAAATATTGGAAATCCAATCCCTTATCGAGGTGCGAAACGTATGCCTCGCGAAGCATACGGTCACCGCAGTTCTGGTGGGTCAAAGAACTGCAGTGACTGGAACAGTGATCCTAGTCTATTTGTTGAGAAGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAAATATTCGTGCTGCAAGAGAGATTCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCGAATACAGTGCAAGAAACAATGACCCTATCGATAATTCTGGAGATTATGGTGAAGCTGCGATGTTTGTTATAGAAGCCAAGACTCCGGAAGCTGCAAAACAAGCTCGAGCTAAACTGGAATACTCTGAGCTGTATTTAGGTGCTCCACGTCGTTATGTAGGCCGTTTGATCGGGAAAAGAACCTCANATATTATGTCCATTATTCGTANATCTGGTGTTGTTCACATTCATTTCGATGATCATATCGAAGGCCCTGTATCTCTCAGCGATGATAATAACCAAACTGATGn ]
[+] EMBL CD064948 [ TCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCGAATACAGTGCAAGAAACAATGACCCTATCGATAATTCTGGAGATTATGGTGAAGCTGCGATGTTTGTTATAGAAGCCAAGACTCCGGAAGCTGCAAAACAAGCTCGAGCTAAACTGGAATACTCTGAGCTGTATTTAGGTGTTCCACGTCGTTATGTAGGCCGTTTGATCGGGAAAAGAACCTCAAATATTATGTCCATTATTCGTAAATCTGGTGTTGTTCACATTCATTTCGATGATCATATCGAAGGCCCTGTATCTCTCAGCGATGATAATAACCAAACTGATGTTATCAAGTATTCCCATCCAGGGCGTCCTTTAGCAAGCACAATGCGACGAGTCTTTTTGAAGGCTGGAAGTGCTCAGACATCCTCGCAACCACATACAGATGAGGAATACGGTGGATTCATACTAGCTGGCACAAGGGACTCTATCG ]
[+] EMBL CD064957 [ TCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCGAATACAGTGCAAGAAACAATGACCCTATCGATAATTCTGGAGATTATGGTGAAGCTGCGATGTTTGTTATAGAAGCCAAGACTCCGGAAGCTGCAAAACAAGCTCGAGCTAAACTGGAATACTCTGAGCTGTATTTAGGTGTTCCACGTCGTTATGTAGGCCGTTTGATCGGGAAAAGAACCTCAAATATTATGTCCATTATTCGTAAATCTGGTGTTGTTCACATTCATTTCGATGATCATATCGAAGGCCCTGTATCTCTCAGCGATGATAATAACCAAACTGATGTTATCAAGTATTCCCATCCAGGGCGTCCTTTAGCAAGCACAATGCGACGAGTCTTTTTGAAGGCTGGAAGTGCTCAGACATCCTCGCAACCACATACAGATGAGGAATACGGTGGATTCATACTAGCTGGCACAAGGGACTCTATCGAAAAAGCTCGTTTGTTGATCAACTTCCAAATGGATTACTTCTACGATCTTGAAAAAATGGAGAGCGAAAAGCTGGAGTTAATGCGTAGTTTATCTCATGGTGGAGAGG ]
[+] EMBL CD060527 [ TTGATCGGGAAAAGAACCTCAAATATTATGTCCATTATTCGTAAATCTGGTGTTGTTCACATTCATTTCGATGATCATATCGAAGGCCCTGTATCTCTCAGCGATGATAATAACCAAACTGATGTTATCAAGTATTCCCATCCAGGGCGTCCTTTAGCAAGCACAATGCGACGAGTCTTTTTGAAGGCTGGAAGTGCTCAGACATCCTCGCAACCACATACAGATGAGGAATACGGTGGATTCATACTAGCTGGCACAAGGGACTCTATCGAAAAAGCTCGTTTGTTGATCAACTTCCAAATGGATTACTTCTACGATCTTGAAAAAATGGAGAGCGAAAAGCTGGAGTTAATGCGTAGTTTATCTCATGGTGGAGTGGACTCTGGTCCAGACTATCCACCTCGTGGTACGGgcatcc ]
[-] EMBL CD128835 [ ATGTCCATTATTCGTAAATCGGGTGTTGTTCACATTCATTTCGATGATCATATCGAAGGCCCTGTATCTCTCAGCGATGATAATAACCAAACTGATGTTATCAAGTATTCCCATCCAGGGCGTCCTTTAACAAGCACAATGCGACGAGTCTTTTTGAAGGCTGGAAGTGCTCAGACATCCTCGCAACCACATACAGATGAGGAATACGGTGGATTCATACTAGCTGGCACAAGGGACTCTATCGAAAAAGCTCGTTTGTTGATCAACTTCCAAATGGATTACTTCTACGATCTTGAAAAAATGGAGAGCGAAAAGCTGGAGTTAATGCGTAGTTTATCTCATGGTGGAGTGGACTCTGGTCCAGACTACCCACCTCGTGGTACGGTAGTCGGACGTTGGGGTGACCGCGGTGGTGTTGGGAATTATGGACGTGGTGGTCGCGGACGCAGACCAGGTCGTAGTGGTCTGTTACATCCTCCTGTTAGTGATGTTGTCAATCATGGACATTATACAGAT ]
[+] EMBL CD153732 [ TTTAGCAAGCACAATGCGACGAGTCTTTTTGAAGGCTGGAAGTGCTCAGACATCCTCGCAACCACATACAGATGAGGAATACGGTGGATTCATATTAGCTGGCACAAGGGACTCTATCGAAAAAGCTCGTTTGTTGATCAACTTCCAAATGGATTACTTCTACGATCTTGAAAAAATGGAGAGCGAAAAGCTGGAGTTAATGCGTAGTTTATCTCATGGTGGAGTGGACTCTGGTCCAGACTACCCACCTCGTGGTACGGTAGTCGGACGTTGGGGTGACCGCGGTGGTGTTGGGAATTATGGACGTGGTGGTCGCGGACGCAGACCAGGTCGTAGTGGTCTGTTACATCCTCCTGTTAGTGATGTTGTCAATCATGGACATTATACAGATGATGAAAATATTGGAAATCCAATCCCTTATCGAGGCGCAAAACGTATGCCTCGCGAAGCATACAATCACCGCAGTTCTGGTGGAAGAATCCCACGT ]
[+] EMBL CD116420 [ TATGGACGTGGTGGTCGCGGACGCAGACCAGGTCGTAGTGGTCTGTTACATCCTCCTGTTAGTGATGTTGTCAATCATGGACATTATACAGATGATGAAAATATTGGAAATCCAATCCCTTATCGAGGCGCGAAACGTATGCCTCGCGAAGCATACGGTCACCGCAGTTCTGGTGGAAGAATCCCACGTCAAAGTGGAAGAGGAAGTCGGCGAATGGGAGGTTCTGGTCGCGATCCTAATTGGAATAACCACATTAACAACAATGGAGATGTCGCTGACCGTCGTCGAGGCTCGAATGATTCGGATGTCTTAGAGTCTGACAACTTACCTGACGG ]
[+] EMBL CD134724 [ ATGAAAATATTGGAAATCCAATCCCTTATCGAGGCGCGAAACGTATGCCTCGCGAAGCATACGGTCACCGCAGTTCTGGTGGAAGAATCCCACGTCAAAGTGGAAGAGGAAGTCGGCGAATGGGAGGTTCTGGTCGCGATCCTAATTGGAATAACCACATTAACAACAATGGAGATGTCGCTGACCGTCGTCGAGGCTCGAATGATTCGGATGTCTTAGAGTCTGACAACTTACCTGACGGTTTATCATCGGAACGGGCAAACGCTGGAAAACATAACAGGATAGGACGTCATTCTCCAGCTCCAAATGGATTTTATTCTGATAGAGAACGTGGGGACGAAAGTGAGGATACCCTTAATCCTAACAACGAAAACAATTTCCCTTGTGGTGATGCGTCTTCTGAAGACGGCGGGGGTTGTTCAGTTGACAATATGCGTTCAAGACTGAATAAATATGTACATAGTCGTCGTAACAGTAAATCACGCCCCCCACGTCGCTCACATCAAGATCGTCCTCAAAATTCCGACCAATGGGATACCAATTGTCAATTC ]
[+] EMBL CD134756 [ ATGAAAATATTGGAAATCCAATCCCTTATCGAGGCGCGAAACGTATGCCTCGCGAAGCATACGGTCACCGCAGTTCTGGTGGAAGAATCCCACGTCAAAGTGGAAGAGGAAGTCGGCGAATGGGAGGTTCTGGTCGCGATCCTAATTGGAATAACCACATTAACAACAATGGAGATGTCGCTGACCGTCGTCGAGGCTCGAATGATTCGGATGTCTTAGAGTCTGACAACTTACCTGACGGTTTATCATCGGAACGGGCAAACGCTGGAAAACATAACAGGATAGGACGTCATTCTCCAGCTCCAAATGGATTTTATTCTGATAGAGAACGTGGGGACGAAAGTGAGGATACCCTTAATCCTAACAACGAAAACAATTTCCCTTGTGGTGATGCGTCTTCTGAAGACGGCGGGGGTTGTTCAGTTGACAATATGCGTTCAAGACTGAATAAATATGTACATAGTCGTCGTAACAGTAAATCACGCCCCCCACGTCGCTCACATCAAGATCGTCCTCAAAATTCCGACCAATGGGATACCAATTGTCAATTC ]
[+] EMBL AI975626 [ ATAACCACATTAACAACAATGGAGATGTCGCTGACCGTCGTCGAGGCTCGAATGATTCGGATGTCTTAGAGTCTGACAACTTACCTGACGGTTTATCATCGGAACGGGCAAACGCTGGAAAACATAACAGGATAGGACGTCATTCTCCAGCTCCAAATGGATTTTATTCTGATAGAGAACGTGGGGACGAAAGTGAGGATACCCTTAATCCTAACAACGAAAACAATTTCCCTTGTGGTGATGCGTCTTCTGAAGACGGCGGGGGTTGTTCAGTTGACAATATGCGTTCAAGACTGAATAAATATGTACATAGTCGTCGTAACAGTAAATCACGCCCCCCACGTCGCTCACATCAAGATCGTCCTCAAAATTCCGACCAATGGGATACCAATTGTCAATTCAACAACGTCGATTCATCTCTCGGTAGTCAGAAATTGCGTAGTGCTGGTGGTAATTATTCTGCCAGACAGCAGTCGGTGCAAGTAGTATACCAGGAATAGAGT ]
[+] EMBL AI977612 [ TAATCCTAACAACGAAAACAATTTCCCTTGTGGTGATGCGTCTTCTGAAGACGGCGGGGGTTGTTCAGTTGACAATATGCGTTCAAGACTGAATAAATATGTACATAGTCGTCGTAACAGTAAATCACGCCCCCCACGTCGCTCACATCAAGATCGTCCTCAAAATTCCGACCAATGGGATACCAATTGTCAATTCAACAACGTCGATTCATCTCTCGGTAGTCAGAAATTGCGTAGTGCTGGTGGTAATTATTCTGCCAGACAGCAGTCGGTGCAAGTAGTATACCAGGAATAGAGTTCCTTGCACATTTTTACTGGATGTTTGTGTGTACCTCTTTAAGTTGAGTTAACGAAAAAACCTTGTGTATTACATTCTTATGTCTTCATTTCTT GTTGTTGTTCGAATATTGTTTCTTTTGTTACTTTCCTGAAGT TATATATATATATATGGNCTTATATCAACAGTGTTGTCTGCAAACGTTATTACCAATATCCAGTCTCATCTCGTTCATTTCGTATATAAGAATACGTTACACATGTTTATACAACTTTATGATATCTCA ]
[+] EMBL AI976970 [ ACAACGAAAACAATTTCCCTTGTGGTGATGCGTCTTCTGAAGACGGCGGGGGTTGTTCAGTTGACAATATGCGTTCAAGACTGAATAAATATGTACATAGTCGTCGTAACAGTAAATCACGCCCCCCACGTCGCTCACATCAAGATCGTCCTCAAAATTCCGACCAATGGGATACCAATTGTCAATTCAACAACGTCGATTCATCTCTCGGTAGTCAGAAATTGCGTAGTGCTGGTGGTAATTATTCTGCCAGACAGCAGTCGGTGCAAGTAGTATACCAGGAATAGAGTTCCTTGCACATTTTTACTGGATGTTTGTGTGTACCTCTTTAAGTTGAGTTAACGAAAAAACCTTGCGTATTACATTCTTATGTCTTCATTTCTTGGATG TGCTCGAATATTGTTTCTTTTGTTACTTTCCTGAAGN GATATATATATATATatata ]
[+] EMBL AI110938 [ GTCGTCGTAACAGTAAATCACGCCCCCCACGTCGCTCACATCAAGATCGTCCTCAAAATTCCGACCAATGGGATACCAATTGTCAATTCAACAACGTCNATTCATCTCTCGGTAGTCANAAATTGCGTAGTGCTGGTGGTNATTAATCTGCCAAACAGCAGTCGGTGCAAGTAGTATACCAGGAATAGAGTTCCTTGCACATTTTTACTGGATGCTTGTGTGTACCTCTTTAAGTTGAGTTAACNAAAAAACCTTGTGTATTACATTCTTATGTCTNCATTTCTT GTTGTTGTTCGAATATTGTTTCTTTTGTTACTTTCCTGAAGT TATATATATATATATGGTCTTATATCAACAGTGTTGTCTGCAAACGTTATTACCAATATCCAGTCTCATC ]
[+] EMBL AW016951 [ CGGTAGTCAGAAATTGCGTAGTGCTGGTGGTAATTATTCTGCCAGACAGCAGTCGGTGCAAGTAGTATACCAGGAATAGAGTTCCTTGCACATTTTTACTGGATGTTTGTGTGTACCTCTTTAAGTTGAGTTAACGAAAAAACCTTGTGTATTACATTCTTATGTCTTCATTTCTT GTTGTTGTTCGAATATTGTTTCTTTTGTTACTTTCCTGAAGTTATATATATATATATATATATAGTCTTATATCAACAGTGTTGTCTGCAAACGTTATTACCAATATCCAGTCTCATCTCGTTCATTTCGTATATAAGAATACGTTACACATGTTTATACAACTTTATGATATCTCAAACCTGTGATTAGCATGTATATCTTATGTGGTTCACTAGTTTGTTCACGCTCAAATAGCAGTACTTCATTTTAACCGATTCCAGTCTTTTCATCTAGTACCAAGATTTTTAAAAAATAAAAGGACAACCACTTCAGGTTTACTCATAAGCAACTGTTGTATCTCCATTTCTATAAAGATCTGTCACTTTTTAAGAATAATCACCTTTGAACTCATTACTTATCTACCCGTAACTGCGTTTTCCCATCTAAGTGTATTAACTAG]
consensusID : consensus_10973#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1015 fasta sequence
[NGGTCGCAGTTACGGGTAGATAAGTAATGAGTTCAAAGGTGATTATTCTTAAAAAGTGACAGATCTTTATAGAAATGGAGATGAAACTAATAGTAAACCGGAAGTCGAACTCATACTGGATGATCAGCTAAATTATCTCCCTATTCCATCTTGGTGGCCTTGCCGCGTTGTCAAGATTCGAGATGATGTCGCGGTGGTGAAGTTAAATGTAACCCCACCGGCCGATGCAACGCCCTCAGAGATTTCACTTTGTACACAGCTTTCTACCGTCACCGAGATCGTAAGTCGTAAGTCCCTACGTCAGCCCAGTGATGATTGCCCGTGTCTGTCACCTGATATCATCCACCGGCATCGTATCGAAATTCCAAAAGAATTGGCAGATTTTGCTTCTGATCCTTCTGTCCACCATGACTTTTTGCGCCATTGTGGTGGCCCTGTAAG-CCTGTACTACGACAATGAGTCTTCCTGTTTGGTCGTGTTAACGACAGACCCTGTAACAGCAAAGAATGTTGCCTTGTTGGAAGATACTCATTTAAGGATGTTGCGCCAAAAATGGGCCCTAACTCGAAGTCTTCGGCAAACTATTCGAAATCTTGAGGTCAACC-GAGGACCAGATGTATCACGACCAGGTGGGTCAAAGAACTGCAGTGACTGGAACAGTGATCCTAGTCTATTTGTTGAGAAGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAAATATTCGTGCTGCAAGAGAGATTCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCGAATACAGTGCAAGAAACAATGACCCTATCGATAATTCTGGAGATTATGGTGAAGCTGCGATGTTTGTTATAGAAGCCAAGACTCCGGAAGCTGCAAAACAAGCTCGAGCT-AAACTGGAATACTCTGAGCTGTATTTAGGTGTTCCACGTCGTTATGTAGGCCGTTTGATCGGGAA-AAGAACCTCAAATATTATGTCCATTATTCGTAAATCTGGTGTA]
[-] EMBL CD096606 [NGGTCGCAGTTACGGGTAGATAAGTAATGAGTTCAAAGGTGATTATTCTTAAAAAGTGACAGATCTTTATAGAAATGGAGATGAAACTAATAGTAAACCGGAAGTCGAACTCATACTGGATGATCAGCTAAATTATCTCCCTATTCCATCTTGGTGGCCTTGCCGCGTTGTCAAGATTCGAGATGATGTCGCGGTGGTGAAGTTAAATGTAACCCCACCGGCCGATGCAACGCCCTCAGAGATTTCACTTTGTACACAGCTTTCTACCGTCACCGAGATCGTAAGTCGTAAGTCCCTACGTCAGCCCAGTGATGATTGCCCGTGTCTGTCACCTGATATCATCCACCGGCATCGTATCGAAATTCCAAAAGAATTGGCAGATTTTGCTTCTGATCCTTCTGTCCACCATGACTTTTTGCGCCATTGTGGTGGCCCTGTAAG CCTGTACTACGACAATGAGTCTTCCTGTTTGGTCGTGTTAACGACAGACCCTGTAACAGCAAAGAATGTTGCCTTGTTGGAAGATACTCATTTAAGGATGTTG ]
[+] EMBL CD130417 [ GGAAGTCGAACTCATACTGGATGATCAGCTAAATTATCTCCCTATTCCATCTTGGTGGCCTTGCCGCGTTGTCAAGATTCGAGATGATGTCGCGGTGGTGAAGTTAAATGTAACCCCACCGGCCGATGCAACGCCCTCAGAGATTTCACTTTGTACACAGCTTTCTACCGTC ]
[-] EMBL CD130396 [ GAAGTCGAACTCATACTGGATGATCAGCTAAATTATCTCCCTATTCCATCTTGGTGGCCTTGCCGCGTTGTCAAGATTCGAGATGATGTCGCGGTGGTGAAGTTAAATGTAACCCCACCGGCCGATGCAACGCCCTCAGAGATTTCACTTTGTACACAGCTTTCTACCGTCA ]
[+] EMBL CD112231 [ GTAAGTCCTGTACTACGACAATGAGTCTTCCTGTATGGTCGTGTTAGCGACAGACCCTGTAACAGCAAAGAATGTTGCCTTGTTGGAAGATACTCATTTAAGGATGTTGCGCCAAAAATGGGCCCTAACTCGAAGTCTTCGGCAAACTATTCGAAATCTTGAGGTCAACC GAGGACCAGATGTATCACGACCAGGTGGGTCAAAGGACTGCAGTGACTGGAACAGTGATCCTAGTCTATTTGTTGAGAAGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAAATATTCGTGCTGCAAGAGAGATTCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCGAATACAGTGCAAGAAACAATGACCCTATCGATAATTCTGGAGATTATGGTGAAGCTGCGATGTTTGTTATAGAAGCCAAGACTCCGGAAGCTG AAAAC ]
[+] EMBL CD112124 [ TAAG CCTGTACTACGACAATGAGTCTTCCTGTTTGGTCGTGTTAACGACAGACCCTGTAACAGCAAAGAATGTTGCCTTGTTGGAAGATACTCATTTAAGGATGTTGCGCCAAAAATGGGCCCTAACTCGAAGTCTTCGGCAAACTATTCGAAATCTTGAGGTCAACC GAGGACCAGATGTATCACGACCAGGTGGGTCAAAGAACTGCAGTGACTGGAACAGTGATCCTAGTCTATTTGTTGAGAAGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAAATATTCGTGCTGCAAGAGAGATTCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCGAATACAGTGCAAGAAACAATGACCCTATCGATAATTCTGGAGATTATGGTGAAGCT ]
[+] EMBL CD112126 [ TAAG CCTGTACTACGACAATGAGTCTTCCTGTTTGGTCGTGTTAACGACAGACCCTGTAACAGCAAAGAATGTTGCCTTGTTGGAAGATACTCATTTAAGGATGTTGCGCCAAAAATGGGCCCTAACTCGAAGTCTTCGGCAAACTATTCGAAATCTTGAGGTCAACC GAGGACCAGATGTATCACGACCAGGTGGGTCAAAGAACTGCAGTGACTGGAACAGTGATCCTAGTCTATTTGTTGAGAAGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAAATATTCGTGCTGCAAGAGAGATTCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCGAATATAGTGCAAGAAACAATGACCCTATCGATAATTCTGGAGATTATGGTGAAGCTGCGATGTTTGTTATAGAAGCCAAGACTCCGGAAGCTGCAAAACAAGCTCGAGCT AAACTGGAAT ]
[+] EMBL CD064841 [ ACGACAATGAGTCTTCCTGTTTGGTCGTGTTAACGACAGACCCTGTAACAGCAAAGAATGTTGCCTTGTTGGAAGATACTCATTTAAGGATGTTGCGCCAAAAATGGGCCCTAACTCGAAGTCTTCGGCAAACTATTCGAAATCTTGAGGTCAACC GAGGACCAGATGTATCACGACCAGGTGGGTCAAAGAACTGCAGTGACTGGAACAGTGATCCTAGTCTATTTGTTGAGAAGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAAATATTCGTGCTGCAAGAGAGATTCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCGAATACAGTGCAAGAAACAATGACCCTATCGATAATTCTGGAGATTATGGTGAAGCTGCGATGTTTGTTATAGAAGCCAAGACTCCGGAAGCTGCAAAACAAGCTCGAGCT AAACTGGAATACTCTGAGCTGTATTTAGGTGTTCCACGTCGTTATGTAGGCCGTTTGATCGGGAA AAGAACCTCANATATTATGTCCATTATTCGTAAAT ]
[+] EMBL CD121040 [ AATGAGTCTTCCTGTTTGGTCGTGTTAACGACAGACCCTGTAACAGCAAAGAATGTTGCCTTGTTGGAAGATACTCATTTAAGGATGTTGCGCCAAAAATGGGCCCTAACTCGAAGTCTTCGGCAAACTATTCGAAATCTTGAGGTCAACC GAGGACCAGATGTATCACGACCAGGTGGGTCAAAGAACTGCAGTGACTGGAACAGTGATCCTAGTCTATTTGTTGAGAAGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAA ]
[-] EMBL CD064753 [ AACTCGAAGTCTTCGGCAAACTATTCGAAATCTTGAGGTCAACC GAGGACCAGATGTATCACGACCAGGTGGGTCAAAGAACTGCAGTGACTGGAACAGTGATCCTAGTCTATTTGTTGAGAAGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAAATATTCGTGCTGCAAGAGAGATTCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCCAATACAGTGCAAGAAACAATGACCCTATCGATAATTCTGGAGATTATGGTGAAGCTGCGATGTTTGTTATAGAAGCCAAGACTCCGGAAGCTGCAAAACAAGCTCGAGCT AAACTGGAATACTCTGAGCTGTATTTAGGTGTTCCACGTCGTTATGTAGGCCGTTTGATCGGGAA AAGAACCTCAAATATTATGTCCATTATTCGTAAATCTGGT ]
[+] EMBL CD060854 [ AACCAGAGGACCAGATGTATCACGACCAGGTGGGTCAAAGAACTGGAGTGACTGGAACAGTGATCCTAGTCTATTTGTTGAGAAGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAAATATTCGTGCTGCAAGAGAGATTCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCGAATACAGTGCAAGAAACAATGACCCTATCGATAATACTGGAGATTATGGTGAAGCTGCGATGTTTGTTATAGAAGCCAAGACTCCGGACGCTGCAAAACAAGCTCGAGCTAAAACTGGAATACTCTGAGCTGTATTAAGGTGTACCACGTCGTTATGTAGGCCGTTAGATCGGGAACAAGAACCTCAAATATTATGTCCATTATTCGTAAATCTGGTGTA]
consensusID : consensus_10973#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 556 fasta sequence
[GGATCAGAAGCAAAATCTGCCAATTCTTTTGGAATTTCGATACGATGCCGGTGGATGATATCAGGTGACAGACACGGGCAATCATCACTGGGCTGACGTAGGGACTTACGACTTACGATCTCGGTGACGGTAGAAAGCTGTGTTCAAAGTGAAATCTCTGAGGGCGTTGCATCGGCCGGTGGGGTTACATTTAACTTCACCACCGCGACATCATCTCGAATCTTGACAACGCGGCAAGGCCACCAAGATGGAATAGGGAGATAATTTAGCTGATCATCCAGTATGAGTTCGACTTCCGGTTTACTATTAGTTTCATCTCCCCAACGACCAGGCAGTGTAATTGTATTACTAGAGGAACTTGGAGTCTGATCAGTCGCGATAGAAAATAGGGCTTCCCCGCTTTGTCCAGGATGAACATCCCTTTCAGAGGTTGGGGGTAGTCGCACATTTTTGATCGGAACCTGTTCCTCTTCATTCTTTTCCGGGTAGAAGACAATCACATTTTCGTCAACTACGTTGCGCAGGACAGCTTTTATGTATTGATTTAAACGTCCCT]
[+] EMBL CD169490 [GGATCAGAAGCAAAATCTGCCAATTCTTTTGGAATTTCGATACGATGCCGGTGGATGATATCAGGTGACAGACACGGGCAATCATCACTGGGCTGACGTAGGGACTTACGACTTACGATCTCGGTGACGGTAGAAAGCTGTGTTCAAAGTGAAATCTCTGAGGGCGTTGCATCGGCCGGTGGGGTTACATTTAACTTCACCACCGCGACATCATCTCGAATCTTGACAACGCGGCAAGGCCACCAAGATGGAATAGGGAGATAATTTAGCTGATCATCCAGTATGAGTTCGACTTCCGGTTTACTATTAGTTTCATCTCCCCAACGACCAGGCAGTGTAATTGTATTACTAGAGGAACTTGGAGTCTGATCAGTCGCGATAGAAAATAGGGCTTCCCCGCTTTGTCCAGGATGAACATCCCTTTCAGAGGTTGGGGGTAGTCGCACATTTTTGATCGGAACCTGTTCCTCTTCATTCTTTTCCGGGTAGAAGACAATCACATTTTCGTCAACTACGTTGCGCAGGACAGCTTTTATGTATTGATTTAAACGTCCCT]
[+] EMBL CD169449 [GGATCAGAAGCAAAATCTGCCAATTCTTTTGGAATTTCGATACGATGCCGGTGGATGATATCAGGTGACAGACACGGGCAATCATCACTGGGCTGACGTAGGGACTTACGACTTACGATCTCGGTGACGGTAGAAAGCTGTGTTCAAAGTGAAATCTCTGAGGGCGTTGCATCGGCCGGTGGGGTTACATTTAACTTCACCACCGCGACATCATCTCGAATCTTGACAACGCGGCAAGGCCACCAAGATGGAATAGGGAGATAATTTAGCTGATCATCCAGTATGAGTTCGACTTCCGGGTTACTATTAGTTc ]
[-] EMBL CD192362 [ TTGACAACGCGGCAAGGCCACCAAGATGGAATAGGGAGATAATTTAGCTGATCATCCAGTATGAGTTCGACTTCCGGTTTACTATTAGTTTCATCTCCCCAACGACCAGGCAGTGTAATTGTATTACTAGAGGAACTTGGAGTCTGATCAGTAGCGATAGAAAATAGGGCTTCCCCGCTTTGTCCAGGATGAACATCCCTTTCAGA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10973#0 TACATCCTCCTGTTAGTGATGTTGTCAATCATGGACATTATACAGATGATGAAAATATTG 60
consensus_10973#1 ------------------------------------------------------------
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 GAAATCCAATCCCTTATCGAGGTGCGAAACGTATGCCTCGCGAAGCATACGGTCACCGCA 120
consensus_10973#1 ------------------------------------------------------------
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 GTTCTGGTGGGTCAAAGAACTGCAGTGACTGGAACAGTGATCCTAGTCTATTTGTTGAGA 180
consensus_10973#1 ------------------------------------------------------------
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 AGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAAATATTC 240
consensus_10973#1 ------------------------------------------------------------
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 GTGCTGCAAGAGAGATTCCCGATGTAATCCGTATCGAGTCGTGGGAACCGTCCGAATACA 300
consensus_10973#1 ------------------------------------------------------------
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 GTGCAAGAAACAATGACCCTATCGATAATTCTGGAGATTATGGTGAAGCTGCGATGTTTG 360
consensus_10973#1 ------------------------------------------------------------
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 TTATAGAAGCCAAGACTCCGGAAGCTGCAAAACAAGCTCGAGCTAAACTGGAATACTCTG 420
consensus_10973#1 ------------------------------------------------------------
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 AGCTGTATTTAGGTGTTCCACGTCGTTATGTAGGCCGTTTGATCGGGAAAAGAACCTCAA 480
consensus_10973#1 ------------------------------------------------------------
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 ATATTATGTCCATTATTCGTAAATCTGGTGTTGTTCACATTCATTTCGATGATCATATCG 540
consensus_10973#1 ------------------------------------------------------------
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 AAGGCCCTGTATCTCTCAGCGATGATAATAACCAAACTGATGTTATCAAGTATTCCCATC 600
consensus_10973#1 ------------------------------------------------------------
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 CAGGGCGTCCTTTAGCAAGCACAATGCGACGAGTCTTTTTGAAGGCTGGAAGTGCTCAGA 660
consensus_10973#1 ------------------------------------------------------------
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 CATCCTCGCAACCACATACAGATGAGGAATACGGTGGATTCATACTAGCTGGCACAAGGG 720
consensus_10973#1 ------------------------------------------------------------
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 ACTCTATCGAAAAAGCTCGTTTGTTGATCAACTTCCAAATGGATTACTTCTACGATCTTG 780
consensus_10973#1 ------------------------------------------------------------
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 AAAAAATGGAGAGCGAAAAGCTGGAGTTAATGCGTAGTTTATCTCATGGTGGAGTGGACT 840
consensus_10973#1 ------------------------------------------------------------
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 CTGGTCCAGACTACCCACCTCGTGGTACGGTAGTCGGACGTTGGGGTGACCGCGGTGGTG 900
consensus_10973#1 ------------------------------------------------------------
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 TTGGGAATTATGGACGTGGTGGTCGCGGACGCAGACCAGGTCGTAGTGGTCTGTTACATC 960
consensus_10973#1 -------------------NGGTCGCAGTTACGGGTAGATAAGTAATGAGTTCAAAGGTG 41
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 CTCCTGTTAGTGATGTTGTCAATCATGGACATTATACAGATGATGAAAATATTGGAAATC 1020
consensus_10973#1 ATTATTCTTAAAAAGTGACAGATCTT------TATAGAAATGGAGATGAAACTAATAGT- 94
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 CAATCCCTTATCGAGGCGCGAAACGTATGCCTCGCGAAGCATACGGTCACCGCAGTTCTG 1080
consensus_10973#1 -AAACCGGAAGTCGAACTCATACTGGATGATCAGCTAAATTATCTCCCTATTCCATCTTG 153
consensus_10973#2 ------------------------GGATCAGAAGCAAAATCTGC--------CAATTCTT 28
* ** ** ** * * * *
consensus_10973#0 GTGGAAGAATCCCAC-GTCAAAGTGGAAGAGGAAGTCGGCGAATGGGAGGTTCTGGTCGC 1139
consensus_10973#1 GTGGCCTTGCCGCGTTGTCAAGATTCGAGATGATGTCG-CGGTGGTGAAGTT-------- 204
consensus_10973#2 TTGGAATTTCGATAC------GATGCCGGTGGATGATATCAGGTGACAGACACGGG---C 79
*** * * ** * * * *
consensus_10973#0 GATCCTAATTGGAATAACCACATTAACAACAATGGA-GATGTCGCTGACCGTCGTCGAGG 1198
consensus_10973#1 AAATGTAACCCCACCGGCCGATGCAACGCCCTCAGA-GATTTCACT--TTGTACACAGCT 261
consensus_10973#2 AATCATCACTGGGCTGACGTAGGGACTTACGACTTACGATCTCGGTGACGGTAGAAAGCT 139
* * * * * * * *** ** * **
consensus_10973#0 CTCGAATGATTCGGATGTCTTAGAGTCTGACAACTTACCTGACGGTTTATCATCGGAACG 1258
consensus_10973#1 TTCTACCGTCACCGAGATCGTAAGTCGTAAGTCCCTAC--GTCAGCCCAGT--------- 310
consensus_10973#2 GTGTTCAAAGTGAAATCTCTGAGGGCGTTGCA-TCGGCCGGTGGGGTTACA--------- 189
* * ** * * * * * *
consensus_10973#0 GGCAAACGCTGGAAAACATAACAGGATAGGACGTCATTCTCCAGCTCCAAATGGATTTTA 1318
consensus_10973#1 GATGATTGCCCGTGTCTGTCACCTGATA-----TCATCCACCGGCATCGTATCGA---AA 362
consensus_10973#2 --TTTAACTTCACCACCGCGACATCATC-----TCGAATCTTGACAACGCGGCAAGGCCA 242
** ** ** * * * *
consensus_10973#0 TTCTGATAGAGAACGTGGGGACGAAAGTGAGGATACCCTTAATCCTAACAACGAAAACAA 1378
consensus_10973#1 TTCCAAAAGAA----TTGGCA-------GATTTTGCTTCTGATCCTTCTGTCCACCATGA 411
consensus_10973#2 CCAAGATGGAA----TAGGGA-------GATAATTTAGCTGATC-----ATCCAGTATGA 286
* ** * ** * ** * * *** * * * *
consensus_10973#0 TTTCCCTTGTGGTGATGCGTCTTCTGAAGACGGCGGGGGTTGTTCAGTTGACAATATGCG 1438
consensus_10973#1 CTTTTTGCGCCATTGTGGTGGCCCTGTAAGC--------CTGTACTAC-GACAATGAGTC 462
consensus_10973#2 GTTCGACTTCCGGTTTACTATTAGTTTCATCTCC-----CCAACGACCAGGCAGTGTAAT 341
** * * * * ** *
consensus_10973#0 TTCAAGACTGAATAAATATGTACATAGTC--GTCGTAACAGTAAATCACGCC-CCCCACG 1495
consensus_10973#1 TTCCTGTTTGGTCGTGT-TAACGACAGAC--CCTGTAACAGCAAAGAATGTT-GCCTTGT 518
consensus_10973#2 TGTATTACTAGAGGAACTTGGAGTCTGATCAGTCGCGATAGAAAATAGGGCTTCCCCGCT 401
* * * * * * ** *** * **
consensus_10973#0 TCGCTCAC-ATCAAGATCGTCCTCAAAATTCCGAC-CAATGGGATACCAATTGTCAATTC 1553
consensus_10973#1 TGGAAGAT-AC-----TCATTTAAGGATGTTGCGC-CAAAAATGGGCC-----CTAACTC 566
consensus_10973#2 TTGTCCAGGATGAACATCCCTTTCAGAGGTTGGGGGTAGTCGCACATTTTTGATCGGAAC 461
* * * * ** * * * *
consensus_10973#0 AACAACGTCGATTCATCTCTCGGTAGTCAGAAATTG-CGTAGTGCTGGTGGTAATTATTC 1612
consensus_10973#1 GAAGTCTTCGGCAAACTATTCGAAATCTTGAGGTCAACCGAGGACCAGATGTA-TCA--C 623
consensus_10973#2 CTGTTCCTC--TTCATTCTTTTCCGGGTAGAAGACAATCACATTTTCGT--CAACTA--- 514
* ** * * ** * * *
consensus_10973#0 TGCCAGACAGCAGTCGGTGCAAGTAGTATACCAGGAATAGAGTTCCTTGCACATTTTTAC 1672
consensus_10973#1 GACCAGGTGG--GTCAAAG-AACTGCAGTGACTGGAACAGTGATCCTAGTCTATTTGTTG 680
consensus_10973#2 CGTTGCGCAG--GACAGCTTTTATGTATTGATTTAAAC---GTCCCT------------- 556
* * * * * ** * ***
consensus_10973#0 TGGATGTTTGTGTGTACCT-CTTTAAGTTGAGTTAACGAAAAAACCTTGTGTATTACATT 1731
consensus_10973#1 AGAAGTTTTTTGTTCCTCAACATCTCATGGGTTTAGCTATAGGTGCTCGTGGTGTAAATA 740
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 CTTATGTCTTCAT-----TTCTTGTTGTTGTTCGAATATTGTTTCTTTTGTTACTTTCCT 1786
consensus_10973#1 TTCGTGCTGCAAGAGAGATTCCCGATGTAATCCG--TATCGAGTCGTGGGA-ACCGTCCG 797
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 GAAGTTATATATATATATATGGTCTTATATCAACAGTGTTGTCTGCAAACGTTATTACCA 1846
consensus_10973#1 AATACAGTGCAAGAAACAATGACCCTA--TCGATAAT----TCTGGAGA--TTATGGTGA 849
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 ATATCCAGTCTCATCTCGTTCATTTCGTATATAAGAATACGTTACACATGTTTATACAAC 1906
consensus_10973#1 AGCTGCGATGTTTGTTATAGAAGCCAAGACTCCGGAAGCTGCAAAACAAGCTCGAGCTAA 909
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 TTTATGATATCTCAAACCTGTGATTAGCATGTATATCTTATGTGGTTCACTAGTTTGTTC 1966
consensus_10973#1 ACTGGAATA-CTCTGAGCTGTATTTAG-----GTGTTCCACGTCGTTATGTAGGCCGTT- 962
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 ACGCTCAAATAGCAGTACTTCATTTTAACCGATTCCAGTCTTTTCATCTAGTACCAAGAT 2026
consensus_10973#1 -TGATCGGGAAA-AGAACCTCAAATATTATGTCCATTATTCGTAAATCTGGTGTA----- 1015
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 TTTTAAAAAATAAAAGGACAACCACTTCAGGTTTACTCATAAGCAACTGTTGTATCTCCA 2086
consensus_10973#1 ------------------------------------------------------------
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 TTTCTATAAAGATCTGTCACTTTTTAAGAATAATCACCTTTGAACTCATTACTTATCTAC 2146
consensus_10973#1 ------------------------------------------------------------
consensus_10973#2 ------------------------------------------------------------
consensus_10973#0 CCGTAACTGCGTTTTCCCATCTAAGTGTATTAACTAG 2183
consensus_10973#1 -------------------------------------
consensus_10973#2 -------------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||