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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10974#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 22 consensus length = 996 fasta sequence
[GGCAGCTGACTTCA-TA-CCGCAGCGCCTGCTCCTGATATGTCTCTCCGCTATTCGAACGATTCTAATTTTGTGTTCGATGATGCTTCATATAACGATCTGGAACTAGTTCACTTTCGTCTTACTGATTCTGCCCTGAAAGATATTGAGCAACTCGCTAGCACTCTAGGAAACCACAGCTTTAGCATTACGTTCAGTGGGTCCGAAGGAGTAATGTTCTATTATATAATTATTTCACTTCCGTAGTCTTTTATTGTTCCTATCGGGAAAAACAGCAGCAAATTTACATTCAGTACCTCAAGCTTAACAAGTACTCACGATGAATCTTTTAATTGCTTGCGCACCAAAGGAGTTTCAACTAATTGTCTGGGAAAGATGGTCTCCAGAATCACTGTCAACGCTAAGGAGGATAGCTTCTCAGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC-C-TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC-T-GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCCCAAATCTCCTACTGACCGGTCTCGAACCGCTTCTCCT]
[+] EMBL CD063803 [GGCAGCTGACTTCA TA CCGCAGCGCCTGCTCCTGATATGTCTCTCCGCTATTCGAACGATTCTAATTTTGTGTTCGATGATGCTTCATATAACGATCTGGAACTAGTTCACTTTCGTCTTACTGATTCTGCCCTGAAAGATATTGAGCAACTCGCTAGCACTCTAGGAAACCACAGCTTTAGCATTACGTTCAGTGGGTCCGAAGGAGTAATGTTCTATTATATAATTATTTCACTTCCGTAGTCTTTTATTGTTCCTATCGGGAAAAACAGCAGCAAATTTACATTCAGTACCTCAAGCTTAACAAGTACTCACGATGAATCTTTTAATTGCTTGCGCACCAAAGGAGTTTCAACTAATTGTCTGGGAAAGATGGTC ]
[-] EMBL CD201004 [ TCATTATCCGCAGCGCCTGCTCCTGATATGTCTCTCCGCTATTCGAACGATTCTAATTTTGTGTTCGATGATGCTTCATATAACGATCTGGAACTAGTTCACTTTCGTCTTACTGATTCTGCCCTGGAAGATATTGAGCAACTCGCTAGCACTCTAGGAAACCACAGCTTTAGCATTACGTTCAGTGGGTCCGAAGGAGTAATGTTCTATTATATAATTATTTCACTTCCGTAGTCTTTTATTGTTCCTATCGGGATAAACAGCAGCAAATTTACATTCAGTACCTCAAGCTTAACAAGTACTCACGATGAATCTTTTAATTGCTTGCGCACCAAAGGAGTTTCAACTAATTGTCTGGGAAAGATGGTCTCCAGAATCACTGTCTACGCTAAGGAGGATAGCTTCTCAGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTTAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTT ]
[-] EMBL CD200997 [ AGTTCACTTTCGTCTTACTGATTCTGCCCTGAAAGATATTGAGCAACTCGCTAGCACTCTAGGAAACCACAGCTTTAGCATTACGTTCAGTGGGTCCGAAGGAGTAATGTTCTATTATATAATTATTTCACTTCCGTAGTCTTTTATTGTTCCTATCGGGAAAAACAGCAGCAAATTTACATTCAGTACCTCAAGCTTAACAAGTACTCACGATGAATCCTTTAATTGCTTGCGCACCAAAGGAGTTTCAACTAATTGTCTGGGAAAGATGGTCTCCGGAATCACTGTCAACGCTAAGGAGGATAGCTTCTCAGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGGATCCTGTT ]
[+] EMBL CD118286 [ TATTGAGCAACTCGCTAGCACTCTAGGAAACCACAGCTTTAGCATTACGTTCAGTGGGTCCGAAGGAGTAATGTTCTATTATATAATTATTTCACTTCCGTAGTCTTTTATTGTTCCTATCGGGAAAAACAGCAGCAAATTTACATTCAGTACCTCAAGCTTAACAAGTACTCACGATGAATCTTTTAATTGCTTGCGCACCAAAGGAGTTTCAACTAATTGTCTGGGAAAGATGGTCTCCAGAATCACTGTCAACGCTAAAGAGGATAGCTT ]
[+] EMBL CD089863 [ TCAGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGT ]
[+] EMBL CD089690 [ TCAGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCCCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGGAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTAACTTATACCGTCTGTGGTGTCAGAATTAGACGCCA ]
[-] EMBL CD095884 [ CAGCGGCTAGGGAGCGAATGGCAC ATTAAGAGACGAAGATAGAAAGTCTCAACGAAAAGAAATCAAATCTGCCAAAAGCATGGCATCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATNTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCCCAAATCTCCTACTGACCGGTCTCGAACCGCTTCTCCT]
[+] EMBL CD096099 [ AGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCCCAAATCTCCTACTGACCGGT ]
[+] EMBL CD096043 [ AGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCGCAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGNTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCCCAAATCTCCTACTGACCGnt ]
[+] EMBL CD086252 [ AGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCCCAAATCTCCTACTGTCC ]
[+] EMBL CD095990 [ AGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCNCCCAAATCTCCTACTGACC ]
[+] EMBL CD086182 [ AGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGC ]
[+] EMBL CD095861 [ AGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAATATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGC ]
[+] EMBL CD095725 [ AGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACGGGCCAGGTTATAC T GGTGCAGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGC ]
[+] EMBL CD096013 [ AGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCCAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACCGGCCAGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGC ]
[+] EMBL CD086070 [ AGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCCCAAATCTCCTACTGACCGGTCTCGAACCGCTTCTCC ]
[+] EMBL CD086119 [ AGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAACATAAAAAGTCTCAAACCAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAGTGAAGTTTCACCTCAGAACATACATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCGCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGATAGAACGCATTATTCACATACTGGCATT CGGCGCTTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGG TATTCTT GTTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCCCAAATCTTCTACTGACCGGT ]
[+] EMBL CD086226 [ AGCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCCCAAATCTCCTACTGACCGGT ]
[-] EMBL CD086273 [ GCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGTTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCTCCAAATCTCCTACTGACCGGTC ]
[+] EMBL CD086125 [ GAAAGGGAAATGAAGTTTCGCCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCGGTCTTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC TAGGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCCCAAATCTCCTACTGACCGGTCTCGAACCGCTTCTCC ]
[+] EMBL CD150728 [ TATTCACATACTGCTATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACTGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACT ]
[+] EMBL CD150724 [ TATTCACATACTGGCATTACGGC C TTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACTGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCCGGTTATAC T GGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACT ]
consensusID : consensus_10974#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 654 fasta sequence
[AGAGTCACTGGCCGACTTTTAACATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGCCTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATACTGGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCCCAAATCTCCTACTGACCGGTCTCGAACCGCTTCTCCTGACAATCTGCACATCCCCTCTGATGACCAGTTTACTCGACGTCCAACAAGAGCAAATGCTGCGTCGGCACCTCAT]
[+] EMBL CD086100 [AGAGTCACTGGCCGACTTTTAACATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGCCTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATACTGGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCCCAAATCTCCTACTGACCGGTCTCGAACCGCTTCTCCTGACAATCTGCACAT ]
[+] EMBL CD113986 [ AGTCCAGTCACAGAATCCTGTTGGTTGAGGTCCCAGTCCTCCATTACCTAACCCACATGTTTTGGCACGCTCACTGATAGAACGCATTATTCACATACTGGCATTACGGCCTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCATAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATACTGGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTANTCATCAGCCCCAAACTCCCCCCAAATCTCCTACTGACCGGTCTCGAACCGCTTCTCCTGACTATTCGTCCACCCCCTCTGATGACCAGTTTACTCGACGTCCAACAAGAGCAAATGCTGCGTCGGCACCTCAT]
consensusID : consensus_10974#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 464 fasta sequence
[GGAGTTTGGGACTGCTGACTAGTCTTTAGAGAAATGATCCGTCTTCTCTCAGCACCAGTATAACCTGGCCAGTTGGCATCTAATTCTGACACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGCCTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGCCAGAATTAGATGCCAACTGGCCAGGTTATACTGGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTACCCAGCAGTCCCAACCTC]
[+] EMBL CD095970 [GGAGTTTGGGACTGCTGACTAGTCTTTAGAGAAATGATCCGTCTTCTCTCAGCACCAGTATAACCTGGCCAGTTGGCATCTAATTCTGACACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGCCTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATCGGCATACTACCTTATACCGTCTGTGGTGCCAGAATTAGATGCCAACTGGCCAGGTTATACTGGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTACCCAGCAGTCCCAACCTC]
consensusID : consensus_10974#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 401 fasta sequence
[GCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGCCTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATTAAATAACAATG]
[-] EMBL CD095770 [GCGGCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATCAAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGCAGTCATGGTGTAAATTTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTTCCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCCATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGCATTACGGCCTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCATACCCAGAAAGAGCAAATATCCGACATTAAATAACAATG]
consensusID : consensus_10974#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 238 fasta sequence
[TGACTTCATTATCCGCAGCGCCTGCTCCTGATATGTCTCTCCGCTATTCGAACGATTCTAATTTTGTGTTCGATGATGCTTCATATAACGATCTGGAACTAGTTCACTTTCGTCTTACTGATTCTGCCCTGAAAGATATTGAGCAACTCGCTAGCACTCTAGGAAACCACAGCTTTAGCATTACGTTCAGTGGGTCCGAAGGATCTTTTATTGTTCCTATCGGGAAAAACAGCAGCAA]
[-] EMBL CD194713 [TGACTTCATTATCCGCAGCGCCTGCTCCTGATATGTCTCTCCGCTATTCGAACGATTCTAATTTTGTGTTCGATGATGCTTCATATAACGATCTGGAACTAGTTCACTTTCGTCTTACTGATTCTGCCCTGAAAGATATTGAGCAACTCGCTAGCACTCTAGGAAACCACAGCTTTAGCATTACGTTCAGTGGGTCCGAAGGATCTTTTATTGTTCCTATCGGGAAAAACAGCAGCAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10974#1 ------------------------------------------------------------
consensus_10974#3 ------------------------------------------------------------
consensus_10974#2 ------------------------------------------------------------
consensus_10974#0 GGCAGCTGACTTCATACCGCAGCGCCTGCTCCTGATATGTCTCTCCGCTATTCGAACGAT 60
consensus_10974#4 ------------------------------------------------------------
consensus_10974#1 ------------------------------------------------------------
consensus_10974#3 ------------------------------------------------------------
consensus_10974#2 ------------------------------------------------------------
consensus_10974#0 TCTAATTTTGTGTTCGATGATGCTTCATATAACGATCTGGAACTAGTTCACTTTCGTCTT 120
consensus_10974#4 ------------------------------------------------------------
consensus_10974#1 ------------------------------------------------------------
consensus_10974#3 ------------------------------------------------------------
consensus_10974#2 ------------------------------------------------------------
consensus_10974#0 ACTGATTCTGCCCTGAAAGATATTGAGCAACTCGCTAGCACTCTAGGAAACCACAGCTTT 180
consensus_10974#4 ------------------------------------------------------------
consensus_10974#1 ------------------------------------------------------------
consensus_10974#3 ------------------------------------------------------------
consensus_10974#2 ------------------------------------------------------------
consensus_10974#0 AGCATTACGTTCAGTGGGTCCGAAGGAGTAATGTTCTATTATATAATTATTTCACTTCCG 240
consensus_10974#4 ------------------------------------------------------------
consensus_10974#1 ------------------------------------------------------------
consensus_10974#3 ------------------------------------------------------------
consensus_10974#2 ------------------------------------------------------------
consensus_10974#0 TAGTCTTTTATTGTTCCTATCGGGAAAAACAGCAGCAAATTTACATTCAGTACCTCAAGC 300
consensus_10974#4 ------------------------------------------------------------
consensus_10974#1 ------------------------------------------------------------
consensus_10974#3 ------------------------------------------------------------
consensus_10974#2 ------------------------------------------------------------
consensus_10974#0 TTAACAAGTACTCACGATGAATCTTTTAATTGCTTGCGCACCAAAGGAGTTTCAACTAAT 360
consensus_10974#4 ------------------------------------------------------------
consensus_10974#1 ---------------------------------------------------------AGA 3
consensus_10974#3 ---------------------------------------------------------GCG 3
consensus_10974#2 ------------------------------------------------------------
consensus_10974#0 TGTCTGGGAAAGATGGTCTCCAGAATCACTGTCAACGCTAAGGAGGATAGCTTCTCAGCG 420
consensus_10974#4 ------------------------------------------------------------
consensus_10974#1 GTCACTGGCCGACTTTTAACATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATC 63
consensus_10974#3 GCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATC 63
consensus_10974#2 -----------------------------------------------------GGAGTTT 7
consensus_10974#0 GCTAAGGAGCGAATGACACAATTAGAAGACGAAAATAAAAAGTCTCAAACAAAAGAAATC 480
consensus_10974#4 ------------------------------------------------------------
consensus_10974#1 AAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGC 123
consensus_10974#3 AAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGC 123
consensus_10974#2 GGGACTGCTGACT----AGTCTTTAGAGAAATGATCCGTC--TTCTCTCAGCACCAGTAT 61
consensus_10974#0 AAATCTGCCAAATCCATGGCTTCAAGAACAGCAGTACCTCAATCCGCTCACAAACAAGGC 540
consensus_10974#4 ------------------------------------------------------------
consensus_10974#1 AGTCATGGTGTAAAT-TTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTT 182
consensus_10974#3 AGTCATGGTGTAAAT-TTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTT 182
consensus_10974#2 AACC-TGGCC--AGT-T----GGCATCTAATTCTGA-----CACCTCAGAACATAGATTT 108
consensus_10974#0 AGTCATGGTGTAAAT-TTAAAGGGAAAGGGAAATGAAGTTTCACCTCAGAACATAGATTT 599
consensus_10974#4 -----TGACTTCATTATCCGCAGCGCCTGCTCCTGATATGTCTCTCCGCTATTCGAACGA 55
** * * * * *** * * * * *
consensus_10974#1 CCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCC 242
consensus_10974#3 CCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCC 242
consensus_10974#2 CCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCC 168
consensus_10974#0 CCCTAATGTAGCCAATCGAGTTCAGTCACAGAATCCTGTTGGTTGTGGTCCCAGTCCTCC 659
consensus_10974#4 TTCTAATTTTGTGTTCGATGATGCTTCATATAAC-------GATCTGGAACTAGTTCACT 108
***** * * * * *** * ** * * *** * *** * *
consensus_10974#1 ATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGC 302
consensus_10974#3 ATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGC 302
consensus_10974#2 ATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGC 228
consensus_10974#0 ATTACCTAACCCAGATGTTTTGGCACGCTCACTGAGAGAACGCATTATTCACATACTGGC 719
consensus_10974#4 TTCGTCTTACTGATTCTGCCCTGAAAGAT-ATTGAGC-AACTCGCTAG-CACTCTAGGAA 165
* ** ** * * * * * * **** *** * ** *** *
consensus_10974#1 ATTACGGCCTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCA 362
consensus_10974#3 ATTACGGCCTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCA 362
consensus_10974#2 ATTACGGCCTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCA 288
consensus_10974#0 ATTACGGCCTTATCAGCGCCCCGAATTATTATTACGGTTGTCCCGTGATGGCTTGTCGCA 779
consensus_10974#4 ACCACAGCTTTAGCATTACGTTCAGTGGGTCCGAAGGATCTTTTATTGTTCCTATCGGGA 225
* ** ** *** ** * * * * * ** * * * * ** * *
consensus_10974#1 TACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATC 422
consensus_10974#3 TACCCAGAAAGAGCAAATATCCGACATTAAATAA-CAATG-------------------- 401
consensus_10974#2 TACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATC 348
consensus_10974#0 TACCCAGAAAGAGCAAATATCCGACATCTTGTCGTCAGTCGGTCGTGTTGGAAGGCAATC 839
consensus_10974#4 AAAACAGCAGCAA----------------------------------------------- 238
* *** * *
consensus_10974#1 GGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC 482
consensus_10974#3 ------------------------------------------------------------
consensus_10974#2 GGCATACTACCTTATACCGTCTGTGGTGCCAGAATTAGATGCCAACTGGCCAGGTTATAC 408
consensus_10974#0 GGCATACTACCTTATACCGTCTGTGGTGTCAGAATTAGATGCCAACTGGCCAGGTTATAC 899
consensus_10974#4 ------------------------------------------------------------
consensus_10974#1 TGGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCC 542
consensus_10974#3 ------------------------------------------------------------
consensus_10974#2 TGGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTACCCAGCAGTCCCAACCTC---- 464
consensus_10974#0 TGGTGCTGAGAGAAGACGGATCATTTCTCTAAAGACTAGTCAGCAGTCCCAAACTCCCCC 959
consensus_10974#4 ------------------------------------------------------------
consensus_10974#1 CAAATCTCCTACTGACCGGTCTCGAACCGCTTCTCCTGACAATCTGCACATCCCCTCTGA 602
consensus_10974#3 ------------------------------------------------------------
consensus_10974#2 ------------------------------------------------------------
consensus_10974#0 CAAATCTCCTACTGACCGGTCTCGAACCGCTTCTCCT----------------------- 996
consensus_10974#4 ------------------------------------------------------------
consensus_10974#1 TGACCAGTTTACTCGACGTCCAACAAGAGCAAATGCTGCGTCGGCACCTCAT 654
consensus_10974#3 ----------------------------------------------------
consensus_10974#2 ----------------------------------------------------
consensus_10974#0 ----------------------------------------------------
consensus_10974#4 ----------------------------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||