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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10979#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 27 consensus length = 1004 fasta sequence
[AAACAATATGTATAATTATTCGCATATTTTACAAAGGGTGCAGTTAGCGACTAAGCTATTTGAGCGTCTTTGACTTTGAGTGATTTAATCACAGCAAGAGAAGACCCTTTTAGTGTCCATGGAACATTTTTATACATAGCGATCCCGTTTTCGTTTACTCTAAGATCTGGCTTCACTTGTTCAAAAATTTTCTTTTTGGGATTAAGTTGGTCATCAGGATCGTGTCTAGTTCCAGGAACCACAACTGAATCACCTAACTGTATATCTGG-GCCCTCGACAATCAAAGGCTCTACTCCACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT-CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGTACCTCTGTCCTCTGTTCGGGTTGCTCTTCAGGCACTAG-TTTTTTTTCAGACAATGGTCCGATTTCCAGTGAATTTCCATTCAAATTAGAAACACTGGATACAGCCTTGACAGATGGTAAATGATATTGTTGGTTTAACCCAAGAAGTAGCTCCTGTTGAATAACTGATTCTTTTAACGATTTTATCCTGTGCAACAACTGTTGA-TTCTGTACTTTGAGGCATGCTTCAACATAGTTTACCGCATCTGGTGTCGCAATTGATTCCAAATGTTTTAACTTGTCAGAGATAGACTGCAATAGCTTATTCATCCTCGCAACCCGACAGTACCGAATAATTTTATACAGCGCGCCAAACGGTCCAAATGG]
[+] EMBL CD074870 [AAACAATATGTATAATTATTCGCATATTTTACAAAGGGTGCAGTTAGCGACTAAGCTATTTGAGCGTCTTTGACTTTGAGTGATTTAATCACAGCAAGAGAAGACCCTTTTAGTGTCCATGGAACATTTTTATACATAGCGATCCCGTTTTCGTTTACTCTAAGATCTGGCTTCACTTGTTCAAAAATTTTCTTTTTGGGATTAAGTTGGTCATCAGGATCGTGTCTAGTTCCAGGAACCACAACTGAATCACCTAACTGTATATCTGG GCCCTCGACAATCAAAGGCTCTACTCCACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTNTCACTGAGTCT ]
[-] EMBL AI977628 [ ATCCCGTTTTCGTTTACTCTAAGATCTGGCTTCACTTGTTCAAAAATTTTCTTTTTGGGATTAAGTTGGTCATCAGGATCGTGTCTAGTTCCAGGAACCACAACTGAATCACCTAACTGTATATCTGG GCCCTCGACAATCAAAGGCTCTACTCCACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCG ]
[+] EMBL CD066235 [ ATCTGGNGCCCTCGACAATCAAAGGCTCTACTCCACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTATGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGTACCTCTGTCCTCTGTTCGGGTTGCTCTTCAGGCACTAG TTTTTTTTCAGACAATGGTCCGATTTCCAGTGAATTTCCATTCAAATTAGAAACACTGGATACAGCCTTGACAGATGGTAAATGATATTGTTGGTTTAACCCAAGAAGTAGCTCCTGTTGAATAACTGATTCTCTTAACGA ]
[-] EMBL CD110763 [ GG CCCCTCGACAATCAAAGGCTCTACTCCACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATACTTCGACCGACACGTAGATCCAGACGACCAATAT ]
[+] EMBL CD145016 [ CACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACATGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTG ]
[+] EMBL CD145002 [ CACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGC ]
[+] EMBL CD145074 [ CACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTG ]
[-] EMBL CD145068 [ ACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCA ]
[-] EMBL CD152792 [ ACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCCCCAAGCCGGTGGCCACAGGGGGGATTTTGGTTCCCCCCCAAGTCACTTTTCTTTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATA ]
[-] EMBL CD145129 [ ACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGT ]
[-] EMBL CD144995 [ ACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGT ]
[-] EMBL CD145143 [ ACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGCCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGT ]
[-] EMBL CD145080 [ ACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGATAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGT GCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGT ]
[-] EMBL CD145133 [ ACATGTATCTGGAGAGCTTGCACACATCAACATTGCTTCTGATTCAACACCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGT ]
[-] EMBL CD145149 [ CCACGCATTTTTGCTGGCTTGAGGTTGCAGAGAAATATCCCGACTCGATTTTGTAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGT ]
[-] EMBL CD160652 [ ACTCGATTTTGCAGTGATTCGATAGGCAGATATTTCACCAGCCCGCTGACAACAGTGCGTATTTCACTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGTACCTCTGTCCTCTGTTCGGGTTGCTCTTCAGGCACTAGTTTTTTTTTCAGACAATGGTCCGATTTCCAGTGAATTTCCATTCAAATTAGAAACACTGGATACAGCCTTGACAGATGGTAAATGATATTGTTGGTTTAACCCAAGAAGTAGCTCCTGTTGAATAACTGATTCTTTTAAC ]
[+] EMBL CD152703 [ CTT GCGCCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGACTGAGATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGCCTGTTTG ]
[+] EMBL CD152863 [ CTT CCACCCAAGGCGACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTGTCAGCAGATTGTGGTTTTCCATCTGGGATTTTACGTTCGGACTTCGGATTTTTAGTATTCACTGAGTCTGTTTGTACCTCTGTCCTCTGCTCGGGTTGCTCTTCAGGCACTAG TTTTTTTTCAGACAATGGTCCGATTTCCAGTGAATTTCCATTCAAATTAGAAACACTGGATACAGCCTTGACAGATGGTAAATGATATTGc ]
[+] EMBL CD152647 [ CTT CCACCCAAGGCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGCGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTGTAGTGTTCACTGAGTCTGTTTG ]
[+] EMBL CD152609 [ CTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTG ]
[+] EMBL CD145003 [ CTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTACGGATTTTTAGTTTTCACTGAGTCTGTTTG ]
[+] EMBL CD145014 [ CTT CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTACACTGAGTCTGTTTG ]
[-] EMBL CD152870 [ TT CCACCCAAGTCAATTTTCTATACATATAACGAGTCAGCATCAGGATGTCGATTCACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCCCCCAGTCTGTTTGT ]
[-] EMBL CD152661 [ tc CCACCCAAGTCAACTTTCTCTACGTATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGTACCTCTGTCCTCTGTTCGGGTTGCTCTTCAGGCACTAG TTTTTTTTCAGACAATGGTCCGATTTCCAGTGAATTTCCATTCAAATTAGAAACACTGGATACAGCCTTGACAGATGGTAAATGATATTGTTGGTTTAACCCAAGAAGTAGCTCCTGTTGAATAACTGATTCTTTTAACGATTTTATCCTGTGCAACAACTGTTGA TTCTGTACTTTGAGGCATGCTTCAACATAGTTTACCGCATCTGGTGTCGCAATTGATTCCAAATGTTTTAACTTGTCAGAGATAGACTGCAATAGCTTATTCATCCTCGCAACCCGACAGTACCGA ]
[-] EMBL CD145067 [ tc CCACCCAAGTCAACTTTCTCTACATATAACGAGTCAGCATCAGGATGTCGATTTACATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGT ]
[-] EMBL CD098023 [ ATCTATAATTCGACCGACACGTAGATCCAGACGACCAATATCAACAGGCTTCTCAGCAGATTGTGGTTTTCCATCTGGTATTTTACGTTCGGTCTTCGGATTTTTAGTTTTCACTGAGTCTGTTTGTACCTCTGTCCTCTGTTCGGGTTGCTCTTCAGGCACTAG TTTTTTTTCAGACAATGGTCCGATTTCCAGTGAATTTCCATTCAAATTAGAAACACTGGATACAGCCTTGACAGATGGTAAATGATATTGTTGGTTTAACCCAAGAAGTAGCTCCTGTTGAATAACTGATTCTTTTAACGATTTTATCCTGTGCAACAACTGTTGA TTCTGTACTTTGAGGCATGCTTCAGCATAGTTTACCGCATCTGGTGCCGCAATTGATTCCAAATGTTTTAACTTGTCAGAGATAGACTGCAATAGCTTATTCATCCTCGCAACCCGACAGTACCGAATAATTTTATACAGCGCGCCAAACGGTCCAAATGG]
[-] EMBL CD134345 [ GACAATGGTCCGATTTCCAGTGAATTTCCATTCAAATTAGAAACACTGGATACAGCCTTGACAGATGGTAAATGATATTGTTGGTTTAACCCAAGAAGTAGCTCCTGTT AATAACTGATTCTTTTAACGATTTTATCCTGTGCAACAACTGTTGATTTCTGTACTTTGAGGCATGCTTCAACATAGTTTACCGCATCTGGTGTCGCAATTGATTCCAAATGTTTTAACTTGTCAGAGATAGACTGCAATAGC ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||