These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10990#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 1028 fasta sequence [GGTTTGCGTTACGGCATTACGTGTACGCATCATGGGTCTAACAATCTCATCGGTCTTTCAAAGATTATTTGGGAAGAAGTCCATGAGAATTCTAATGATCGGACTTGATGCTGCAGGAAAAACGACAATACTATACAAGCTTAAATTAGGCGAAGTAGTCACAACAATTCCAACAATTGGATTCAATGTAGAGACTGTAGAGTACAAAAATATTAATTTCACAGTGTGGGATGTAGGTGGTCAAGATAAAATTCGACGCTTGTGGAGACATTATTTCCAGAATACACAAGGTCTCATATTTGTGGTTGATAGCAATGATCGTGATCGTATCAGTGAATCTGCCGAAGAGTTGAATAAAATGCTTTTAGAGGATGAACTACGAGATGTTGTTATTTTAGTTTTTGCAAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGT-AAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT--CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATA-TATATATA] [+] EMBL CD081230 [GGTTTGCGTTACGGCATTACGTGTACGCATCATGGGTCTAACAATCTCATCGGTCTTTCAAAGATTATTTGGGAAGAAGTCCATGAGAATTCTAATGATCGGACTTGATGCTGCAGGAAAAACGACAATACTATACAAGCTTAAATTAGGCGAAGTAGTCACAACAATTCCAACAATTGGATTCAATGTAGAGACTGTAGAGTACAAAAATATTAATTTCACAGTGTGGGATGTAGGTGGTCAAGATAAAATTCGACGCTTGTGGAGACATTATTTCCAGAATACACAAGGTCTCATATTTGTGGTTGATAGCAATGATCGTGATCGTATCAGTGAATCTGCCGAAGAGTTGAATAAAATGCTTTTAGAGGATGAACTACGAGATGTTGTTATTTTAGTTTTTGCAAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGT AAAAAAATTTGT ] [+] EMBL CD079070 [ CGTTACGGCATTACGTGTACGCATCATGGGTCTAACAATCTCATCGGTCTTTCAAAGATTATTTGGGAAGAAGTCCATGAGAATTCTAATGATCGGACTTGATGCTGCAGGAAAAACGACAATACTATACAAGCTTAAATTAGGCGAAGTAGTCACAACAATTCCAACAATTGGATTCAATGTAGAGACTGTAGAGTACAAAAATATTAATTTCACAGTGTGGGATGTAGGTGGTCAAGATAAAATTCGACGCTTGTGGAGACATTATTTCCAGAATACACAAGGTCTCATATTTGTGGTTGATAGCAATGATCGTGATCGTATCAGTGAATCTGCCGAAGAGTTGAATAAAATGCTTTTAGAGGATGAACTACGAGATGTTGTTATTTTAGTTTTTGCAAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCANATGAATTATCTANACGATCCTAGAATGTGACANACTTTCCATATTATTCTTATCATTCTTTACT ] [+] EMBL AI975512 [ TGGGTCTAACAATCTCATCGGTCTTTCAAAGATTATTTGGGAAGAAGTCCATGAGAATTCTAATGATCGGACTTGATGCTGCAGGAAAAACGACAATACTATACAAGCTTAAATTAGGCGAAGTAGTCACAACAATTCCAACAATTGGATTCAATGTAGAGACTGTAGAGTACAAAAATATTAATTTCACAGTGTGGGATGTAGGTGGTCAAGATAAAATTCGACGCTTGTGGAGACATTATTTCCAGAATACACAAGGTCTCATATTTGTGGTTGATAGCAATGATCGTGATCGTATCAGTGAATCTGCCGAAGAGTTGAATAAAATGCTTTTAGAGGATGAACTACGAGATGTTGTTATTTTAGTTTTTGCAAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTC ] [+] EMBL CD083105 [ TGATGCTGCAGGAAAAACGACAATACTATACAAGCTTAAATTAGGCGAAGTAGTCACAACAATTCCAACAATTGGATTCAATGTAGAGACTGTAGAGTACAAAAATATTAATTTCACAGTGTGGGATGTAGGTGGTCAAGATAAAATTCGACGCTTGTGGAGACATTATTTCCAGAATACACAAGGTCTCATATTTGTGGTTGATAGCAATGATCGTGATCGTATCAGTGAATCTGCCGAAGAGTTGAATAAAATGCTTTTAGAGGATGAACTACGAGATGTTGTTATTTTAGTTTTTGCAAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTNTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGT AAAAAAAt ] [-] EMBL CD142658 [ GACAATACTATACAAGCTTAAATTAGGCGAAGTAGTCACAACAATCCCAACAATTGGATTCAATGTAGAGACTGTAGAGTACAAAAATATTAATTTCACAGTGTGGGATGTAGGTGGTCAAGATAAAATTCGACGCTTGTGGAGACATTATTTCCAGAATACACAAGGTCTCATATTTGTGGTTGATAGCAATGATCGTGATCGTATCAGTGAATCTGCCGAAGAGTTGAATAAAATGCTTTTGGAGGATGAACTACGAGATGTTGTTATTTTAGTTTTTGCAAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTT ] [+] EMBL CD116713 [ CAATACTATACAAGCTTAAATTAGGCGAAGTAGTCACAACAATTCCAACAATTGGATTCAATGTAGAGACTGTAGAATACAAAAATATTAATTTCACAGTGTGGGATGTAGGTGGTCAAGATAAAATTCGACGCTTGTGGAGACATTATTTCCAGAATACACAAGGTCTCATATTTGTGGTTGATAGCAATGATCGTGATCGTATCAGTGAATCTGCCGAAGAGTTGAATAAAATGCTTTTAGAGGATGAACCACGAGATGTTGTTATTTTAGTTTTTGCAAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGT AAAAAAAA TTGTTGGTGTTGAGATTTTCTG ] [+] EMBL CD078918 [ AAAAATATTAATTTCACAGTGTGGGATGTAGGTGGTCAAGATAAAATTCGACGCTTGTGGAGACATTATTTCCAGAATACACAAGGTCTCATATTTGTGGTTGATAGCAATGATCGTGATCGTATCAGTGAATCTGCCGAAGAGTTGAATAAAATGCTTTTAGAGGATGAACTACGAGATGTTGTTATTTTAGTTTTTGCAAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGT AAAAAAAATTTGTTGTTGTTGGGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGNATATGNGTTCGNGNGTGTATGTGTGAGTGAGTGTATGTATG ] [-] EMBL CD091556 [ ggaaggGTATCAGTGAATCTGCCGAAGAGTTGAATAAAATGCTTTTAGAGGATGAACTACGAGATGTTGTTATTTTAGTTTTTGCAAATAAACAAGATTTACCAAGTGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACCTTCCA ] [+] EMBL CD080514 [ TGTTGTTATTTTAGTTTTTGCAAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGTAAAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTG TTTTCCACTT AT ATGATAGG ATATGTTTTATCc ] [-] EMBL CD077087 [ AAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGT AAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACCTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATAGTATATATA] [-] EMBL CD074717 [ TTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATTTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGTAAAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATA TATATA ] [-] EMBL CD074425 [ CCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTNTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGTAAAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATA TATATATA] [-] EMBL CD200689 [ CAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCGTATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGT AAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTT ] [-] EMBL CD075061 [ GCGGAAGTTGCTGAAAAGTTGCGTNTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGT AAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATA TATATATA] [-] EMBL CD073375 [ CGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGT AAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACCTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATA TATATATA] [-] EMBL CD077197 [ AGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGTAAAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGT TCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATA TATATA ] [-] EMBL CD073525 [ GTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGT AAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATA TATATATA] [-] EMBL CD077221 [ tnTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGTAAAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATA TATATATA] [-] EMBL CD074762 [ GAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCCCCATTCTGTAAAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATA TATATA ] [-] EMBL CD076679 [ TTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGT AAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATA TATA ] [+] EMBL CD132281 [ TGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGTAAAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTCATTCCCCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTT ] consensusID : consensus_10990#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 638 fasta sequence [CCTCGGGCCAANAATTCGGCACGAGGTGCAAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNCCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTNNNNNNNNATTCTGTAAAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATTCCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTT-CCATATATATATACATANNAAAAAAAANAAN] [+] EMBL CD080883 [CCTCGGGCCAANAATTCGGCACGAGGTGCAAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNCCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTNNNNNNNNATTCTGTAAAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATTCCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTT CCATAT ] [+] EMBL CD080928 [ NNNNNNNNNNNNNNACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTNNNNNNNNATTCTGTAAAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATTCCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCAT TATATATACATANNAAAAAAAANAAN] consensusID : consensus_10990#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 394 fasta sequence [CAAGGACTGGTGGNGNTGAANAAATTTGNTTTTCCCANTTCATAAGGANNGGGGNAAAGGTTTTTNATCCCGNCCCTTTCCCCNTCAGNGGGGGGTATNTTTACGGNGGTTNATACTATTTTTTTCAATTATTTCCCATNATTAATTTTCTATAATATTTAACTTATATAAATATATATATATATACATATATATTTATTTGTATTTCATATGCACATATCTTTCGATATATAGATTGTACGTAAATAAGGGAAGTGGGGATATGTGTGTCGATTCTTCAAATTACGGTGCTTTTTTTATCCATTCCCTTTTTTCTATCTTATGATTCGACTTTTACGTGTGTTTTTTTTGTTTGTTTGTGCACGGTTGGAGAATATAAATATGTTTAGAGTGT] [-] EMBL AW466259 [CAAGGACTGGTGGNGNTGAANAAATTTGNTTTTCCCANTTCATAAGGANNGGGGNAAAGGTTTTTNATCCCGNCCCTTTCCCCNTCAGNGGGGGGTATNTTTACGGNGGTTNATACTATTTTTTTCAATTATTTCCCATNATTAATTTTCTATAATATTTAACTTATATAAATATATATATATATACATATATATTTATTTGTATTTCATATGCACATATCTTTCGATATATAGATTGTACGTAAATAAGGGAAGTGGGGATATGTGTGTCGATTCTTCAAATTACGGTGCTTTTTTTATCCATTCCCTTTTTTCTATCTTATGATTCGACTTTTACGTGTGTTTTTTTTGTTTGTTTGTGCACGGTTGGAGAATATAAATATGTTTAGAGTGT] consensusID : consensus_10990#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 275 fasta sequence [TNAGCCAANATTCGGCACGAGGCATATTGACTATGATCATGAAGAAAAATAGATATGCGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATATATATATA] [+] EMBL CD080774 [TNAGCCAANATTCGGCACGAGGCATATTGACTATGATCATGAAGAAAAATAGATATGCGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATATATATAT ] [-] EMBL CD074699 [ tTATTGACTATGATCATGAAGAAAAATAGATATGCGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATATATATATA] consensusID : consensus_10990#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 144 fasta sequence [GGATTCAATGTAGAGACTGTAGAGTACAAAAATATTAATTTCACAGTGTGGGATGTAGGTGGTCAAGATAAAATTCGACGCTTGTGGAGACATTATTTCCAGAATACACAAGGTCTCATATTTGTGGTTGTGGAAACGTTTAGT] [-] EMBL CD168469 [GGATTCAATGTAGAGACTGTAGAGTACAAAAATATTAATTTCACAGTGTGGGATGTAGGTGGTCAAGATAAAATTCGACGCTTGTGGAGACATTATTTCCAGAATACACAAGGTCTCATATTTGTGGTTGTGGAAACGTTTAGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10990#2 ------------------------------------------------------------ consensus_10990#3 ------------------------------------------------------------ consensus_10990#1 ------------------------------------------------------------ consensus_10990#0 GGTTTGCGTTACGGCATTACGTGTACGCATCATGGGTCTAACAATCTCATCGGTCTTTCA 60 consensus_10990#4 ------------------------------------------------------------ consensus_10990#2 ------------------------------------------------------------ consensus_10990#3 ------------------------TNAGCCAANATTCGGCACGAGGCATATTGACTATGA 36 consensus_10990#1 ------------------------------------------------------------ consensus_10990#0 AAGATTATTTGGGAAGAAGTCCATGAGAATTCTAATGATCGGACTTGATGCTGCAGGAAA 120 consensus_10990#4 ------------------------------------------------------------ consensus_10990#2 -----------------------------------------------------------C 1 consensus_10990#3 TCATGAAGAAAAATAGATATGCGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTAC 96 consensus_10990#1 -CCTCGGGCCAANAATTCGGCACGAGGTGCAAATAAACAAGATTTACCAAATGCTATGTC 59 consensus_10990#0 AACGACAATACTATACAAGCTTAAATTAGGCGAAGTAGTCACAACAATTCCAACAATTGG 180 consensus_10990#4 ----------------------------------------------------------GG 2 consensus_10990#2 AAGGACTGGTGGNGNTGAANAAATTTGNTTTTCCCANTTCATAAGGANNGGGGNAAAGGT 61 consensus_10990#3 AATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTT 156 consensus_10990#1 AACTGCGGAAGTTGCTGAAAAG--TTNNNNNNNNNNNNNNNNNNNNNNNNNNCCTTGGCA 117 consensus_10990#0 ATTCAATGTAGAGACTGTAGAGTACAAAAATATTAATTTCACAGTG--TGGGATGTAGGT 238 consensus_10990#4 ATTCAATGTAGAGACTGTAGAGTACAAAAATATTAATTTCACAGTG--TGGGATGTAGGT 60 * * ** * consensus_10990#2 TTTTNATCCCGNCCCTTTCCCCNTCAGNGGGGGG-TATNT------TTACGGNGGTTNA- 113 consensus_10990#3 TTTTCATCCCGCCCTCT--CCCCTCAGTGGTGTG-TATCT------TTACGGTGGTTTAC 207 consensus_10990#1 TATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATC 177 consensus_10990#0 GGTCAAGATAAAATTCG--ACGCTTGTGGAGACATTATTT------CCAGAATACACAAG 290 consensus_10990#4 GGTCAAGATAAAATTCG--ACGCTTGTGGAGACATTATTT------CCAGAATACACAAG 112 * * * * *** * * consensus_10990#2 TACTATTTTTTTCAATTATTTCC----CATNATTAATTTTCTATAATATT--TAACTTAT 167 consensus_10990#3 TACTATTTTTTTCAATTATTTCC----CATTATTAATTTTCTATAATATT--TA-CTTAT 260 consensus_10990#1 AAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTC 237 consensus_10990#0 GTCTCATATTTGTGGTTGATAGC----AATGATCGTGATCGTATCAGTGAATCTGCCGAA 346 consensus_10990#4 GTCTCATATTTGTGGTTG-TGGA----AACGTTTAGT----------------------- 144 * * * * consensus_10990#2 ATAAATATATATATATATACATATATATTTATTTGTATTTCATATGCACATATCTTTCGA 227 consensus_10990#3 ATAAATATATATATA--------------------------------------------- 275 consensus_10990#1 TTTACTTGGAACGAAACTATACAGGTGTNNNNNNNNATTCTGTAAAAAAAAATTTGTTGT 297 consensus_10990#0 GAGTTGAATAAAATGCTTTTAGAGGATGAACTACGAGATGTTGTTATTTTAGTTTTTGCA 406 consensus_10990#4 ------------------------------------------------------------ consensus_10990#2 TATATAGATTGTACGTAAATAAGGGAAGTGGGGATATGTGTGTCGATTCTTCAAATTACG 287 consensus_10990#3 ------------------------------------------------------------ consensus_10990#1 TGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATTCCCCCCCTTTTT 357 consensus_10990#0 AATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTA 466 consensus_10990#4 ------------------------------------------------------------ consensus_10990#2 GTGCTTTTTTTATCCATTCCCTTTTTTCTATCTTATGATTCGACTTTTACGTGTGTTT-T 346 consensus_10990#3 ------------------------------------------------------------ consensus_10990#1 ATGATTCTATTATTGACTATGATCATGA-AGAAGGAGAGATTTTTGTTGCGCATATCTAT 416 consensus_10990#0 CGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGA 526 consensus_10990#4 ------------------------------------------------------------ consensus_10990#2 TTTTGTTTGTTTGTGCACGGTTGGAGAATATAAATATGTTTA-GAGTGT----------- 394 consensus_10990#3 ------------------------------------------------------------ consensus_10990#1 TNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTATGTGTGAGTGAGTGTATGTATGTACA 476 consensus_10990#0 CTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACA 586 consensus_10990#4 ------------------------------------------------------------ consensus_10990#2 ------------------------------------------------------------ consensus_10990#3 ------------------------------------------------------------ consensus_10990#1 ATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTT 536 consensus_10990#0 AACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCA 646 consensus_10990#4 ------------------------------------------------------------ consensus_10990#2 ------------------------------------------------------------ consensus_10990#3 ------------------------------------------------------------ consensus_10990#1 TTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTT 596 consensus_10990#0 CCATTCTGTAAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAA 706 consensus_10990#4 ------------------------------------------------------------ consensus_10990#2 ------------------------------------------------------------ consensus_10990#3 ------------------------------------------------------------ consensus_10990#1 TTCAATTATTTCCATATATATATACATANNAAAAAAAANAAN------------------ 638 consensus_10990#0 TAATCCCTTTATTCCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGA 766 consensus_10990#4 ------------------------------------------------------------ consensus_10990#2 ------------------------------------------------------------ consensus_10990#3 ------------------------------------------------------------ consensus_10990#1 ------------------------------------------------------------ consensus_10990#0 GAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATG 826 consensus_10990#4 ------------------------------------------------------------ consensus_10990#2 ------------------------------------------------------------ consensus_10990#3 ------------------------------------------------------------ consensus_10990#1 ------------------------------------------------------------ consensus_10990#0 TGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCAC 886 consensus_10990#4 ------------------------------------------------------------ consensus_10990#2 ------------------------------------------------------------ consensus_10990#3 ------------------------------------------------------------ consensus_10990#1 ------------------------------------------------------------ consensus_10990#0 TTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCT 946 consensus_10990#4 ------------------------------------------------------------ consensus_10990#2 ------------------------------------------------------------ consensus_10990#3 ------------------------------------------------------------ consensus_10990#1 ------------------------------------------------------------ consensus_10990#0 TTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATT 1006 consensus_10990#4 ------------------------------------------------------------ consensus_10990#2 ---------------------- consensus_10990#3 ---------------------- consensus_10990#1 ---------------------- consensus_10990#0 TACTTATATAAATATATATATA 1028 consensus_10990#4 ---------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||