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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10990#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 1028 fasta sequence
[GGTTTGCGTTACGGCATTACGTGTACGCATCATGGGTCTAACAATCTCATCGGTCTTTCAAAGATTATTTGGGAAGAAGTCCATGAGAATTCTAATGATCGGACTTGATGCTGCAGGAAAAACGACAATACTATACAAGCTTAAATTAGGCGAAGTAGTCACAACAATTCCAACAATTGGATTCAATGTAGAGACTGTAGAGTACAAAAATATTAATTTCACAGTGTGGGATGTAGGTGGTCAAGATAAAATTCGACGCTTGTGGAGACATTATTTCCAGAATACACAAGGTCTCATATTTGTGGTTGATAGCAATGATCGTGATCGTATCAGTGAATCTGCCGAAGAGTTGAATAAAATGCTTTTAGAGGATGAACTACGAGATGTTGTTATTTTAGTTTTTGCAAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGT-AAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT--CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATA-TATATATA]
[+] EMBL CD081230 [GGTTTGCGTTACGGCATTACGTGTACGCATCATGGGTCTAACAATCTCATCGGTCTTTCAAAGATTATTTGGGAAGAAGTCCATGAGAATTCTAATGATCGGACTTGATGCTGCAGGAAAAACGACAATACTATACAAGCTTAAATTAGGCGAAGTAGTCACAACAATTCCAACAATTGGATTCAATGTAGAGACTGTAGAGTACAAAAATATTAATTTCACAGTGTGGGATGTAGGTGGTCAAGATAAAATTCGACGCTTGTGGAGACATTATTTCCAGAATACACAAGGTCTCATATTTGTGGTTGATAGCAATGATCGTGATCGTATCAGTGAATCTGCCGAAGAGTTGAATAAAATGCTTTTAGAGGATGAACTACGAGATGTTGTTATTTTAGTTTTTGCAAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGT AAAAAAATTTGT ]
[+] EMBL CD079070 [ CGTTACGGCATTACGTGTACGCATCATGGGTCTAACAATCTCATCGGTCTTTCAAAGATTATTTGGGAAGAAGTCCATGAGAATTCTAATGATCGGACTTGATGCTGCAGGAAAAACGACAATACTATACAAGCTTAAATTAGGCGAAGTAGTCACAACAATTCCAACAATTGGATTCAATGTAGAGACTGTAGAGTACAAAAATATTAATTTCACAGTGTGGGATGTAGGTGGTCAAGATAAAATTCGACGCTTGTGGAGACATTATTTCCAGAATACACAAGGTCTCATATTTGTGGTTGATAGCAATGATCGTGATCGTATCAGTGAATCTGCCGAAGAGTTGAATAAAATGCTTTTAGAGGATGAACTACGAGATGTTGTTATTTTAGTTTTTGCAAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCANATGAATTATCTANACGATCCTAGAATGTGACANACTTTCCATATTATTCTTATCATTCTTTACT ]
[+] EMBL AI975512 [ TGGGTCTAACAATCTCATCGGTCTTTCAAAGATTATTTGGGAAGAAGTCCATGAGAATTCTAATGATCGGACTTGATGCTGCAGGAAAAACGACAATACTATACAAGCTTAAATTAGGCGAAGTAGTCACAACAATTCCAACAATTGGATTCAATGTAGAGACTGTAGAGTACAAAAATATTAATTTCACAGTGTGGGATGTAGGTGGTCAAGATAAAATTCGACGCTTGTGGAGACATTATTTCCAGAATACACAAGGTCTCATATTTGTGGTTGATAGCAATGATCGTGATCGTATCAGTGAATCTGCCGAAGAGTTGAATAAAATGCTTTTAGAGGATGAACTACGAGATGTTGTTATTTTAGTTTTTGCAAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTC ]
[+] EMBL CD083105 [ TGATGCTGCAGGAAAAACGACAATACTATACAAGCTTAAATTAGGCGAAGTAGTCACAACAATTCCAACAATTGGATTCAATGTAGAGACTGTAGAGTACAAAAATATTAATTTCACAGTGTGGGATGTAGGTGGTCAAGATAAAATTCGACGCTTGTGGAGACATTATTTCCAGAATACACAAGGTCTCATATTTGTGGTTGATAGCAATGATCGTGATCGTATCAGTGAATCTGCCGAAGAGTTGAATAAAATGCTTTTAGAGGATGAACTACGAGATGTTGTTATTTTAGTTTTTGCAAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTNTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGT AAAAAAAt ]
[-] EMBL CD142658 [ GACAATACTATACAAGCTTAAATTAGGCGAAGTAGTCACAACAATCCCAACAATTGGATTCAATGTAGAGACTGTAGAGTACAAAAATATTAATTTCACAGTGTGGGATGTAGGTGGTCAAGATAAAATTCGACGCTTGTGGAGACATTATTTCCAGAATACACAAGGTCTCATATTTGTGGTTGATAGCAATGATCGTGATCGTATCAGTGAATCTGCCGAAGAGTTGAATAAAATGCTTTTGGAGGATGAACTACGAGATGTTGTTATTTTAGTTTTTGCAAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTT ]
[+] EMBL CD116713 [ CAATACTATACAAGCTTAAATTAGGCGAAGTAGTCACAACAATTCCAACAATTGGATTCAATGTAGAGACTGTAGAATACAAAAATATTAATTTCACAGTGTGGGATGTAGGTGGTCAAGATAAAATTCGACGCTTGTGGAGACATTATTTCCAGAATACACAAGGTCTCATATTTGTGGTTGATAGCAATGATCGTGATCGTATCAGTGAATCTGCCGAAGAGTTGAATAAAATGCTTTTAGAGGATGAACCACGAGATGTTGTTATTTTAGTTTTTGCAAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGT AAAAAAAA TTGTTGGTGTTGAGATTTTCTG ]
[+] EMBL CD078918 [ AAAAATATTAATTTCACAGTGTGGGATGTAGGTGGTCAAGATAAAATTCGACGCTTGTGGAGACATTATTTCCAGAATACACAAGGTCTCATATTTGTGGTTGATAGCAATGATCGTGATCGTATCAGTGAATCTGCCGAAGAGTTGAATAAAATGCTTTTAGAGGATGAACTACGAGATGTTGTTATTTTAGTTTTTGCAAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGT AAAAAAAATTTGTTGTTGTTGGGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGNATATGNGTTCGNGNGTGTATGTGTGAGTGAGTGTATGTATG ]
[-] EMBL CD091556 [ ggaaggGTATCAGTGAATCTGCCGAAGAGTTGAATAAAATGCTTTTAGAGGATGAACTACGAGATGTTGTTATTTTAGTTTTTGCAAATAAACAAGATTTACCAAGTGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACCTTCCA ]
[+] EMBL CD080514 [ TGTTGTTATTTTAGTTTTTGCAAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGTAAAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTG TTTTCCACTT AT ATGATAGG ATATGTTTTATCc ]
[-] EMBL CD077087 [ AAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGT AAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACCTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATAGTATATATA]
[-] EMBL CD074717 [ TTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATTTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGTAAAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATA TATATA ]
[-] EMBL CD074425 [ CCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTNTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGTAAAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATA TATATATA]
[-] EMBL CD200689 [ CAACTGCGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCGTATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGT AAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTT ]
[-] EMBL CD075061 [ GCGGAAGTTGCTGAAAAGTTGCGTNTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGT AAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATA TATATATA]
[-] EMBL CD073375 [ CGGAAGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGT AAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACCTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATA TATATATA]
[-] EMBL CD077197 [ AGTTGCTGAAAAGTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGTAAAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGT TCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATA TATATA ]
[-] EMBL CD073525 [ GTTGCGTTTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGT AAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATA TATATATA]
[-] EMBL CD077221 [ tnTACGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGTAAAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATA TATATATA]
[-] EMBL CD074762 [ GAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCCCCATTCTGTAAAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATA TATATA ]
[-] EMBL CD076679 [ TTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGT AAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATT CCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATA TATA ]
[+] EMBL CD132281 [ TGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCACCATTCTGTAAAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTCATTCCCCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTT ]
consensusID : consensus_10990#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 638 fasta sequence
[CCTCGGGCCAANAATTCGGCACGAGGTGCAAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNCCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTNNNNNNNNATTCTGTAAAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATTCCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTT-CCATATATATATACATANNAAAAAAAANAAN]
[+] EMBL CD080883 [CCTCGGGCCAANAATTCGGCACGAGGTGCAAATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNCCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTNNNNNNNNATTCTGTAAAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATTCCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTT CCATAT ]
[+] EMBL CD080928 [ NNNNNNNNNNNNNNACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTNNNNNNNNATTCTGTAAAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATTCCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGAGAGATTTTTGTTGCGCATATCTATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCAT TATATATACATANNAAAAAAAANAAN]
consensusID : consensus_10990#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 394 fasta sequence
[CAAGGACTGGTGGNGNTGAANAAATTTGNTTTTCCCANTTCATAAGGANNGGGGNAAAGGTTTTTNATCCCGNCCCTTTCCCCNTCAGNGGGGGGTATNTTTACGGNGGTTNATACTATTTTTTTCAATTATTTCCCATNATTAATTTTCTATAATATTTAACTTATATAAATATATATATATATACATATATATTTATTTGTATTTCATATGCACATATCTTTCGATATATAGATTGTACGTAAATAAGGGAAGTGGGGATATGTGTGTCGATTCTTCAAATTACGGTGCTTTTTTTATCCATTCCCTTTTTTCTATCTTATGATTCGACTTTTACGTGTGTTTTTTTTGTTTGTTTGTGCACGGTTGGAGAATATAAATATGTTTAGAGTGT]
[-] EMBL AW466259 [CAAGGACTGGTGGNGNTGAANAAATTTGNTTTTCCCANTTCATAAGGANNGGGGNAAAGGTTTTTNATCCCGNCCCTTTCCCCNTCAGNGGGGGGTATNTTTACGGNGGTTNATACTATTTTTTTCAATTATTTCCCATNATTAATTTTCTATAATATTTAACTTATATAAATATATATATATATACATATATATTTATTTGTATTTCATATGCACATATCTTTCGATATATAGATTGTACGTAAATAAGGGAAGTGGGGATATGTGTGTCGATTCTTCAAATTACGGTGCTTTTTTTATCCATTCCCTTTTTTCTATCTTATGATTCGACTTTTACGTGTGTTTTTTTTGTTTGTTTGTGCACGGTTGGAGAATATAAATATGTTTAGAGTGT]
consensusID : consensus_10990#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 275 fasta sequence
[TNAGCCAANATTCGGCACGAGGCATATTGACTATGATCATGAAGAAAAATAGATATGCGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATATATATATA]
[+] EMBL CD080774 [TNAGCCAANATTCGGCACGAGGCATATTGACTATGATCATGAAGAAAAATAGATATGCGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATATATATAT ]
[-] EMBL CD074699 [ tTATTGACTATGATCATGAAGAAAAATAGATATGCGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATTTACTTATATAAATATATATATA]
consensusID : consensus_10990#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 144 fasta sequence
[GGATTCAATGTAGAGACTGTAGAGTACAAAAATATTAATTTCACAGTGTGGGATGTAGGTGGTCAAGATAAAATTCGACGCTTGTGGAGACATTATTTCCAGAATACACAAGGTCTCATATTTGTGGTTGTGGAAACGTTTAGT]
[-] EMBL CD168469 [GGATTCAATGTAGAGACTGTAGAGTACAAAAATATTAATTTCACAGTGTGGGATGTAGGTGGTCAAGATAAAATTCGACGCTTGTGGAGACATTATTTCCAGAATACACAAGGTCTCATATTTGTGGTTGTGGAAACGTTTAGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10990#2 ------------------------------------------------------------
consensus_10990#3 ------------------------------------------------------------
consensus_10990#1 ------------------------------------------------------------
consensus_10990#0 GGTTTGCGTTACGGCATTACGTGTACGCATCATGGGTCTAACAATCTCATCGGTCTTTCA 60
consensus_10990#4 ------------------------------------------------------------
consensus_10990#2 ------------------------------------------------------------
consensus_10990#3 ------------------------TNAGCCAANATTCGGCACGAGGCATATTGACTATGA 36
consensus_10990#1 ------------------------------------------------------------
consensus_10990#0 AAGATTATTTGGGAAGAAGTCCATGAGAATTCTAATGATCGGACTTGATGCTGCAGGAAA 120
consensus_10990#4 ------------------------------------------------------------
consensus_10990#2 -----------------------------------------------------------C 1
consensus_10990#3 TCATGAAGAAAAATAGATATGCGTTCGTGTGTGTATGTGTGAGTGAGTGTATGTATGTAC 96
consensus_10990#1 -CCTCGGGCCAANAATTCGGCACGAGGTGCAAATAAACAAGATTTACCAAATGCTATGTC 59
consensus_10990#0 AACGACAATACTATACAAGCTTAAATTAGGCGAAGTAGTCACAACAATTCCAACAATTGG 180
consensus_10990#4 ----------------------------------------------------------GG 2
consensus_10990#2 AAGGACTGGTGGNGNTGAANAAATTTGNTTTTCCCANTTCATAAGGANNGGGGNAAAGGT 61
consensus_10990#3 AATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTT 156
consensus_10990#1 AACTGCGGAAGTTGCTGAAAAG--TTNNNNNNNNNNNNNNNNNNNNNNNNNNCCTTGGCA 117
consensus_10990#0 ATTCAATGTAGAGACTGTAGAGTACAAAAATATTAATTTCACAGTG--TGGGATGTAGGT 238
consensus_10990#4 ATTCAATGTAGAGACTGTAGAGTACAAAAATATTAATTTCACAGTG--TGGGATGTAGGT 60
* * ** *
consensus_10990#2 TTTTNATCCCGNCCCTTTCCCCNTCAGNGGGGGG-TATNT------TTACGGNGGTTNA- 113
consensus_10990#3 TTTTCATCCCGCCCTCT--CCCCTCAGTGGTGTG-TATCT------TTACGGTGGTTTAC 207
consensus_10990#1 TATCCAACTTGCTTGTGCTACACAAGGTGAAGGACTATTTGAAGGATTAGATTGGTTATC 177
consensus_10990#0 GGTCAAGATAAAATTCG--ACGCTTGTGGAGACATTATTT------CCAGAATACACAAG 290
consensus_10990#4 GGTCAAGATAAAATTCG--ACGCTTGTGGAGACATTATTT------CCAGAATACACAAG 112
* * * * *** * *
consensus_10990#2 TACTATTTTTTTCAATTATTTCC----CATNATTAATTTTCTATAATATT--TAACTTAT 167
consensus_10990#3 TACTATTTTTTTCAATTATTTCC----CATTATTAATTTTCTATAATATT--TA-CTTAT 260
consensus_10990#1 AAATGAATTATCTAAACGATCCTAGAATGTGACAAACTTTCCATATTATTCTTATCATTC 237
consensus_10990#0 GTCTCATATTTGTGGTTGATAGC----AATGATCGTGATCGTATCAGTGAATCTGCCGAA 346
consensus_10990#4 GTCTCATATTTGTGGTTG-TGGA----AACGTTTAGT----------------------- 144
* * * *
consensus_10990#2 ATAAATATATATATATATACATATATATTTATTTGTATTTCATATGCACATATCTTTCGA 227
consensus_10990#3 ATAAATATATATATA--------------------------------------------- 275
consensus_10990#1 TTTACTTGGAACGAAACTATACAGGTGTNNNNNNNNATTCTGTAAAAAAAAATTTGTTGT 297
consensus_10990#0 GAGTTGAATAAAATGCTTTTAGAGGATGAACTACGAGATGTTGTTATTTTAGTTTTTGCA 406
consensus_10990#4 ------------------------------------------------------------
consensus_10990#2 TATATAGATTGTACGTAAATAAGGGAAGTGGGGATATGTGTGTCGATTCTTCAAATTACG 287
consensus_10990#3 ------------------------------------------------------------
consensus_10990#1 TGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAATAATCCCTTTATTCCCCCCCTTTTT 357
consensus_10990#0 AATAAACAAGATTTACCAAATGCTATGTCAACTGCGGAAGTTGCTGAAAAGTTGCGTTTA 466
consensus_10990#4 ------------------------------------------------------------
consensus_10990#2 GTGCTTTTTTTATCCATTCCCTTTTTTCTATCTTATGATTCGACTTTTACGTGTGTTT-T 346
consensus_10990#3 ------------------------------------------------------------
consensus_10990#1 ATGATTCTATTATTGACTATGATCATGA-AGAAGGAGAGATTTTTGTTGCGCATATCTAT 416
consensus_10990#0 CGTGAAATTCGAAATAGACCTTGGCATATCCAACTTGCTTGTGCTACACAAGGTGAAGGA 526
consensus_10990#4 ------------------------------------------------------------
consensus_10990#2 TTTTGTTTGTTTGTGCACGGTTGGAGAATATAAATATGTTTA-GAGTGT----------- 394
consensus_10990#3 ------------------------------------------------------------
consensus_10990#1 TNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTATGTGTGAGTGAGTGTATGTATGTACA 476
consensus_10990#0 CTATTTGAAGGATTAGATTGGTTATCAAATGAATTATCTAAACGATCCTAGAATGTGACA 586
consensus_10990#4 ------------------------------------------------------------
consensus_10990#2 ------------------------------------------------------------
consensus_10990#3 ------------------------------------------------------------
consensus_10990#1 ATGACTGGTTGAGTTGACATAATTTTGTTTTTCCACTTCATAATGATAGGGTATATGTTT 536
consensus_10990#0 AACTTTCCATATTATTCTTATCATTCTTTACTTGGAACGAAACTATACAGGTGTTAATCA 646
consensus_10990#4 ------------------------------------------------------------
consensus_10990#2 ------------------------------------------------------------
consensus_10990#3 ------------------------------------------------------------
consensus_10990#1 TTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCTTTACGGTGGTTTACTACTATTTTT 596
consensus_10990#0 CCATTCTGTAAAAAAAATTTGTTGTTGTTGTGATTTTCTGTTCTTTTATTACCTTTTGAA 706
consensus_10990#4 ------------------------------------------------------------
consensus_10990#2 ------------------------------------------------------------
consensus_10990#3 ------------------------------------------------------------
consensus_10990#1 TTCAATTATTTCCATATATATATACATANNAAAAAAAANAAN------------------ 638
consensus_10990#0 TAATCCCTTTATTCCCCCCCTTTTTATGATTCTATTATTGACTATGATCATGAAGAAGGA 766
consensus_10990#4 ------------------------------------------------------------
consensus_10990#2 ------------------------------------------------------------
consensus_10990#3 ------------------------------------------------------------
consensus_10990#1 ------------------------------------------------------------
consensus_10990#0 GAGATTTTTGTTGCGCATATCTATTTTTCTTTTCTATGTATATGTGTTCGTGTGTGTATG 826
consensus_10990#4 ------------------------------------------------------------
consensus_10990#2 ------------------------------------------------------------
consensus_10990#3 ------------------------------------------------------------
consensus_10990#1 ------------------------------------------------------------
consensus_10990#0 TGTGAGTGAGTGTATGTATGTACAATGACTGGTTGAGTTGACATAATTTTGTTTTTCCAC 886
consensus_10990#4 ------------------------------------------------------------
consensus_10990#2 ------------------------------------------------------------
consensus_10990#3 ------------------------------------------------------------
consensus_10990#1 ------------------------------------------------------------
consensus_10990#0 TTCATAATGATAGGGTATATGTTTTTTCATCCCGCCCTCTCCCCTCAGTGGTGTGTATCT 946
consensus_10990#4 ------------------------------------------------------------
consensus_10990#2 ------------------------------------------------------------
consensus_10990#3 ------------------------------------------------------------
consensus_10990#1 ------------------------------------------------------------
consensus_10990#0 TTACGGTGGTTTACTACTATTTTTTTCAATTATTTCCCATTATTAATTTTCTATAATATT 1006
consensus_10990#4 ------------------------------------------------------------
consensus_10990#2 ----------------------
consensus_10990#3 ----------------------
consensus_10990#1 ----------------------
consensus_10990#0 TACTTATATAAATATATATATA 1028
consensus_10990#4 ----------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||