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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10991#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1741 fasta sequence
[ATGTCATGTTATGTACTTTAGCGAATTCACCCGGTTACAGCATTGATGATAATA-GTAAT-AATAATAA-CGATAG-TTTTCAAA-AGGGGAAGACATACATGAAGCCAAATGCAAG-TGTTGAGAATATGTTTAGTTTTGCCTGTTTGTAAAAGCTTAATGATTGATTAGAGTAAAATGAAACTGAAGATTAGTGTAATCTGGGATTACAATGTTAGAATTCTTTCGAAACCAATATAAATATTTAATTGATTATGGGTAAGCACTGATGATTCACTAGTATGTTTTGTTCT-GTTCTGTTTTATTTTATTATTTTGTGTTTGTCACAAAATGAATTAAAGTTGAATAGTGAAGTCTGCGCTGACGGCATCAGAATAAGCCATTTGAGTAGGTGAAGGATCAGAGAATTGCATCATTGTGTTGACAAAACCTATGAATTAGTCTGAAGAATTCACAATCGGTGGTGACATTAACGGCGTTGATGGCGGTGGAGGCAATGTCACATTTTGAGCAGCAGGCGCCATAG-ATGGTGGTGGCGGTGGTGGTGGTGGTGTCGACTGAGCAGATGGTGGAACATTCCGTGGTGATTCAACTGGTGTTTGTGTTTGTCCAGGTGGACTAATTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGTCCGGACGTTGATTAGGTGATGCATTCAACCTGACCACTGTTGTATTC-GGCTGTTGCTGCTGTGGTGGTGGTGGTATTGGAGCTTGAAATTGAGGCCGAGGTGTTGGTTTTTGCATTGCTGGCGGTTGGAAATTTTGTTGTTGATGTTGTTGTGCCTGATACTGTTGTGTATTTGGTGCTGTTGTTTGTTTTTGATATTGAACATTATTCGGTTGAATATTTTGCGGTTGAGACTGTGGAGGTGGTGGTGTTCTTGGTGGTACACTAGAACGTCTATTAGTACGTAATTGTGATTGAACACGTGAATAGAGATTTTCTGTTTCTTCAACATCTACACCAGCAGCAGACCGACCACGATTTTCAAGTTCTCGTTCTAAACGTCGTAAATCAAGTGCTTGAGCCTTTGGTTTACGAAAAGCTGATGAAAGTTCATCGCTACATTTTACCTTTTTCAATTGTGCAAGTTTTTTGAATGGATTTTCTGGTTCAACATGACGTAGATCTGGTCGAAAATCTAATTGTGGTTCAATAATTAATATTGTTTCAGCTGCAGCTTCACCCA-TATTATTTCTTGCAACAGCTTTAATATGTAATTCACCAGGTGTACCAACACGATGAAATTCCAAATTACTAATACCACCATCTTGAAATATTCTCCAATTTCCGCCACCTCCAGACGAGGCTATCAATTCCCCATTAATATACCAGAATATTTTAGGCTTTGGATAACCACCTGCTTTAACAAGAAATTTAACTGGCGAACCTTCAGTGACAGTGACAGCAACAGGGAGAATATCGAATGATGGTGCACATGGCGGTTCTTCTTCATCTCTTTTAACTGTATCATAACCTGCCATGGCATCACTTTCCCAAGCATCCAAACTTTGAAGATATGAAATTGATTCTTTCGATAATACTGAACTAGTGACAATATGTTCATCCGCATTACATTGTAATTCAACCACATTGCTTTGTACTTGTCCTGCTGCATTACGTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGTCCGGACGTTGATTAGGTGATGCATTCAACCTGACCACTGTTGTATTCG]
[+] EMBL CD072944 [ATGTCATGTTATGTACTTTAGCGAATTCACCCGGTTACAGCATTGATGATAATA GTAAT AATAATAA CGATAG TTTTCAAA AGGGGAAGACATACATGAAGCCAAATGCAAG TGTTGAGAATATGTTTAGTTTTGCCTGTTTGTAAAAGCTTAATGATTGATTAGAGTAAAATGAAACTGAAGATTAGTGTAATCTGGGATTACAATGTTAGAATTCTTTCGAAACCAATATAAATATTTAATTGATTATGGGTAAGCACTGATGATTCACTAGTATGTTTTGTTCT GTTCTGTTTTATTTTATTATTTTGTGTTTGTCACAAAATGAATTAAAGTTGAATAGTGAAGTCTGCGCTGACGGCATCAGAATAAGCCATTTGAGTAGGTGAAGGATCAGAGAATTGCATCATTGTGTTGACAAAACCTATGAATTAGTCTGAAGAATTCACAATCGGTGGTGACATTAACGGCGTTGATGGCGGTGGAGGCAATGTCACATTTTGAGCAGCAGGCGCCATAA ATGGTGGTGGCGGTGGTGGTGct ]
[+] EMBL CD071386 [ AATACGTAATCAATAATAAGCGATAGTTTTTCAAAGAGGGGAAGACATACATGAAGCCAAATGCAAG TGTTGAGAATATGTTTAGTTTTGCCTGTTTGTAAAAGCTTAATGATTGATTAGAGTAAAATGAAACTGAAGATTAGTGTAATCTGGGATTACAATGTTAGAATTCTTTCGAAACCAATATAAATATTTAATTGATTATGGGTAAGCACTGATGATTCACTAGTATGTTTTGTTCTGGTTCTGTTTTATTTTATTATTT ]
[-] EMBL SMRAP159 [ anACATGAANCCAAATGCAAGTTATTGAGAATATGNNTAGTNTTGCCTGTTTGTAAAAACTTAATGATTGATTAGAGTGAAATGAAACTGAAGATTAGTGTAATCTGGGATTACAATGTTAGAATTCTTTCGAAACCAATATAAATATTTAATTGATTATGGATA ]
[-] EMBL AI975542 [ TTCT GTTCTGTTATATTTTATGATTCTGTGTTTGTCACAAAATCAATTAAAGTTGAATAGTGAAGTATGCGCTGTCGGCATCAGAATGAGCCATTTGAGTAGGTGAAGGATCACAGTATTGCATCATTGTGTTGACAAAACCTATGAATTAGT AGAATTCACAAGCGGTGGTGACATTAACGGCGTTGATGCCGGTGTAGTCAATGTCACATTTTGAGCAGCAGGCGCCATAGTATGTTGGTGACGGTGGTGGTGGTGGTGTCGACTGAGCAGATGGTGGAACATTCCGTGGTGATTCACCTGGTGTTTGTGTTTG ]
[+] EMBL CD165219 [ GTGAAGGATCAGAGAATTGCATCATTGTGTTGACAAAACCTATGAATTAGTCTGAAGAATTCACAATCGGTGGTGACATTAACGGCGTTGATGGCGGTGGAGGCAATGTCACATTTTGAGCAGCAGGCGCCATAG ATGGTGGTGGCGGTGGTGGTGGTGGTGTCGGCTGAGCAGATGGTGGAACATTCCGTGGTGATTCAACTGGTGTTTGTGTTTGTCCAGGTGGACTAATTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGTCCGGACGTTGATTAGGTGATGCATTCAACCTGACCACTGTTGTATTC GGCTGTTGCTGCTGTGGTGGTGGTGGTATTGGAGCTTGAAATTGAG ]
[-] EMBL CD127024 [ GGCGACATCACCGGCGCAGAGGGCGGCGAAGGCAATGTCACATTTTGAGCAGCAGGCGCCATAG ATGGTGGTGCCGGTGGTGGTGGTGGCGTCGACTGAGCAGATGGTGGAACACTCCGTGGTGATTCAACTGGTGTTTGTGTTTGCCCAGGTGGACTAATTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGTCCGGACGTTGATTAGGTGATGCATTCAACCTGACCACTGTTGTATTCGGGCTGTTGCTGCTGTGGTGagagg ]
[-] EMBL CD096347 [ GATGGTGGAACATTCCGTGGTGATTCAACTGGTGTTTGTGTTTGTCCAGGTGGACTAATTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGTCCGGACGTTGATTAGGTGATGCATTCAACCTGACCACTGTTGTATTC GGCTGTTGCTGCTGTGGTGGTGGTGGTATTGGAGCTTGAAATTGAGGCCGAGGTGTTGGTTTTTGCATTGCTGGCGGTTGGAAATTTTGTTGTTGATGTTGTTGTGCCTGATACTGTTGTGTATTTGGTGCTGTTGTTTGTTTTTGATATTGAACATTATTCGGTTGAATATTTTGCGGTTGAGACTGTGGAGGTGGTGGTGTTCTTGGTGGTACACTAGAACGTCTATTAGTACGTAATTGTGATTGAACACGTGAATAGAGATTTTCTGTTTCT ]
[-] EMBL BF936230 [ TGTTGCTGATGTGGTGGTGGTGGTATTGGAGCTTGAAATTGAGGCCGAGGTGTTGGTTTTTGCATTGCTGGCGGTTGGAAATTTTGTTGTTGATGTTGTTGTGCCTGATACTGTTGTGTATTTGGTGCTGTTGTTTGTTTTTGATATTGAACATTATTCGGTTGAATATTTTGCGGTTGAGACTGTGGAGGTGGTGGTGTTCTTGGTGGTACACTAGAACGTCTATTAGTACGTAATTGTGATTGAACACGTGAATAGAGATTTTCTGTTTCTTCAACATCTACACCAGCAGCAGACCGACCACGATTTTCAAGTTCTCGTTCTAAACGTCGTAAATCAAGTGCTTGAGCCTTTGGTTTACGAAAAGCTGATGAAAGTTCATCGCTACATTTTACCTTTTTCAATTGTGCAAGTTTTTTGAATGGATTTTCTGGTTCAACATGACGTAGATCTGGTCGAAAATCTAATTGTGGTTCAATAATTAATATTGTTTCAGCTGCAGCTTCAC ]
[-] EMBL CD122920 [ GTATTTGGTGCTGTTGTTTGTTTTTGATATTGAACATTATTCGGTTGAATATTTTGCGGTTGAGACTGTGGGGGTGGTGGTGTTCTTGGTGGTACACTAGAACGTCTATTAGTACGTAATTGTGATTGAACACGTGAATAGAGATTTTCTGTTTCTTCGACATCTACACCAGCAGCAGACCGACCACGATTTTCAAGTTCTCGTTCTAAACGTCGTAAATCAAGTGCTTGAGCCTTTGGTTTACGAAAAGCTGATGAAAGTTCATCGCTACATTTTACCTTTTTCAATTGTGCAAGTTTTTTGAATGGATTTTCTGGTTCAACATGACGTAGATCTGGTCGAAAATCTAATTGTGGCTCAATAATTAATATTGTTTCAGCTGCAGCTTCACCCA TATTATTTCTTGCAACAGCTTTAATATGTAATTCACCAGGTGTACCAACACGATGAAATTCCAAATTACTAATACCACCATCTTGAAATATTCTCCAATTTCCGCCACCTCCAGACGAGGCTATCAATTCCCCATTAATATACCAGAATATTTTAGGCTTTGGATAACCACCTGCTTTAACAAGAAATTTAACTGGCGAACCTTCAGTGACAGT ]
[+] EMBL CD117640 [ CTTGGTGGTACACTAGAACGTCTATTAGTACGTAATTGTGATTGAACACGTGAATAGAGATTTTCTGTTTCTTCAACATCTACACCAGCAGCAGACCGACCACGATTTTCAAGTTCTCGTTCTAAACGTCGTAAATCAAGTGCTTGAGCCTTTGGTTTACGAAAAGCTGATGAAAGTTCATCGCTACATTTTACCTTTTTCAATTGTGCAAGTTTTTTGAATGGATTTTCTGGTTCAACATGACGTAGATCTGGTCGAAAATCTAATTGTGGTTCAATAATTAATATTGTTTCAGCTGCAGCTTCACCCA TATTATTTCTTGCAACAGCTTTAATATGTAATTCACCAGGTGTACCAACACGATGAAATTCCAAATTACTAATACCACCATCTTGAAATATTCTCCAATTTCCGCCACCTCCAGACGAGGCTATCAATTCCCCATTAATATACCAGAATATTTTAGGCTTTGGATAACCACCTGCTTTAACAAGAAATTTAACTGGCGAACCTTCAGTGACAGTGACAGCAACAGGGAGAATATCGAATGATGGTGCACATGGCGGGTCTTCTTCATCTCTTTTAACTGTATCATAACCTGCCAT ]
[-] EMBL CD078383 [ TCTGTTTCTTCAACATCTACACCAGCAGCAGACCGACCACGATTTTCAAGTTCTCGTTCTAAACGTCGTAAATCAAGTGCTTGAGCCTTTGGTTTACGAAAAGCTGATGAAAGTTCATCGCTACATTTTACCTTTTTCAATTGTGCAAGTTTTTTGAATGGATTTTCTGGTTCAACATGACGTAGATCTGGTCGAAAATCTAATTGTGGTTCAATAATTAATATTGTTTCAGCTGCAGCTTCACCCA TATTATTTCTTGCAACAGCTTTAATATGTAATTCACCAGGTGTACCAACACGATGAAATTCCAAATTACTAATACCACCATCTTGAAATATTCTCCAATTTCCGCCACCTCCAGACGAGGCTATCAATTCCCCATTAATATACCAGAATATTTTAGGCTTTGGATAACCACCTGCTTTAACAAGAAATTTAGCTGGCGAACCTTCAGTGACAGTGACAGCAACAGGGAGAATATCGAATGATGGTGCACATGGCGGTTCTTCTTCATCTCTTTTAACTGTATCATAACCTGCCATGGCATCACTTTCCCAAGCATCCAAACTTTGAAGATATGAAATTGATTCTTTC ]
[-] EMBL CD078296 [ AACATNTACACCAGCAGCAGACCGACCACGATNTTCAAGTTCTCGTTCTAAACGTCGTAAATCAAGTGCTTGAGCCTTTGGTNTACGAAAAGCTGATGAAAGTTCATCGCTACATTTTACCTTTTTCAATTGTGCAAGTTTTTTGAATGGATTTTCTGGTTCAACATGACGTAGATCTGGTCGAAAATCTAATTGTGGTTCAATAATTAATATTGTTTCAGCTGCAGCTTCACCCA TATTATTTCTTGCAACAGCTTTAATATGTAATTCACCAGGTGTACCAACACGATGAAATTCCAAATTACTAATACCACCATCTTGAAATATTCTCCAATTTCCGCCACCTCCAGACGAGGCTATCAATTCCCCATTAATATACCAGAATATTTTAGGCTTTGGATAACCACCTGCTTTAACAAGAAATTTAGCTGGCGAACCTTCAGTGACAGTGACAGCAACAGGGAGAATATCGAATGATGGTGCACATGGCGGTTCTTCTTCATCTCTTTTAACTGTATCATAACCTGCCATGGCATCACTTTCCCAAGCATCCAAACTTTGAAGATATGAAATTGATTCTTTC ]
[-] EMBL AW016961 [ ACCAGCAGCAGGCCGACCACGATTTTCAAGTTCTCGTTCTAAACGTCGTAAATCGAGTGCTTGAGCCTTTGGTCTACGAAAAGCTGATGAAAGTTCATCGATACATTTTACCTTTTTCAATTGTGCAAGTTTTGTGAATGGATTTTCTGGTTCAACATGACGTAGATCTGGTCGAAAATCTAATTGTGGTTCAATAATTAATATTGTTTCAGCTGCAGCTTCACCCA TATTATTTCTTGCAACAGCTTTAATATGTAATTCACCAGGTGTACCAACACGATGAAATTCCAAATTACTAATACCACCATCTTGAAATATTCTCCAATTTCCGCCACCTCCAGACGAGGCTATCAATTCCCCATTAATATACCAGAATATTTTAGGCTTTGGATAACCACCTGCTTTAACAAGAAATTTAACTGGCGAACCTTCAGTGACAGTGACAGCAACAGGGAGAATATCGAATGATGGTGCACATGGCGGTTCTTCTTCATCTCTTTTAACTGTATCATAACCTGCCATGGCATCACTTTCCCAAGCATCCAAACTTTGAAGATATGAAATTGA ]
[-] EMBL CD086123 [ CCACGATTTTCAAGTTCTCGTTCTAAACGTCGTAAATCAAGTGCTTGAGCCTTTGGTTTACGAAAAGCTGATGAAAGTTCATCGCTACATTTTACCTTTTTCAATTGTGCAAGTTTTTTGAATGGATTTTCTGGTTCAACATGACGTAGATCTGGTCGAAAATCTAATTGTGGTTCAATAATTAATATTGTTTCAGCTGCAG TTCGCCCAGTA TATT ]
[-] EMBL CD167011 [ TAAACGTCGTAAATCAAGTGCTTGAGCCTTTGGTTTACGAAAAGCTGATGAAAGTTCATCGCTACATTTTACCTTTTTCAATTGTGCAAGTTTTTTGAATGGATTTTCTGGTTCAACATGACGTAGATCTGGTCGAAAATCTAATTGTGGTTCAATAATTAATATTGTTTCAGCTGCAGCTTCACCCA TATTATTTCTTGCAACAGCTTTAATATGTAATTCACCAGGTGTACCAACACGATGAAATTCCAAATTACTAAT ]
[-] EMBL CD167006 [ TTTTTGAATGGATTTTCTGGTTCAACATGACGTAGATCTGGTCGAAAATCTAATTGTGGTTCAATAATTAATATTGTTTCAGCTGCAGCTTCACCCA TATTATTTCTTGCAACAGCTTTAATATGTAATTCACCAGGTGTACCAACACGATGAAATTCCAAATTACTAAT ]
[-] EMBL BF936218 [ GACGTAGATCTGGTCGAAAATCTAATTGTGGTTCAATAATTAATATTGTTTCAGCTGCAGCTTCACCCA TATTATTTCTTGCAACAGCTTTAATATGTAATTCACCAGGTGTACCAACACGATGAAATTCCAAATTACTAATACCACCATCTTGAAATATTCTCCAATTTCCGCCACCTCCAGACGAGGCTATCAATTCCCCATTAATATACCAGAATATTTTAGGCTTTGGATAACCACCTGCTTTAACAAGAAATTTAACTGGCGAACCTTCAGTGACAGTGACAGCAACAGGGAGAATATCGAATGATGGTGCACATGGCGGTTCTTCTTCATCTCTTTTAACTGTATCATAACCTGCCATGGCATCACTTTCCCAAGCATCCAAACTTTGAAGATATGAAATTGATTCTTTCGATAATACTGAACTAGTGACAATATGTTCATCCGCATTACATTGTAATTCAACCACATTGCTTTGTACTTGTCCTGCTGCATTACGTG ]
[-] EMBL CD112649 [ AATTCCCCATTAATATACCAGAATATTTTAGGCTTTGGATAACCACCTGCTTTAACAAGAAATTTAACTGGCGAACCTTCAGTGACAGTGACAGCAACAGGGAGAATATCGAATGATGGTGCACATGGCGGTTCTTCTTCATCTCTTTTAACTGTATCATAACCTGCCATGGCATCACTTTCCCAAGCATCCAAACTTTGAAGATATGAAATTGATTCTTTCGATAATACTGAACTAGTGACAATATGTTCATCCGCATTACATTGTAATTCAAC TGGTG TTTGTGTTTGTCCAGGTGGACTAATTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGTCCGGACGTTGATTAGGTGATGCATTCAACCTGACCACTGTTGTATTCG]
consensusID : consensus_10991#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 614 fasta sequence
[AATGATTGATTAGAGTAAAATGAAACTGAAGATTAGTGTAATCTGGGATTACAATGTTAG-AATTCTTTCGAAACCAATATAAATATTTAATTGATTATGGGTAAGCACTGATGATTCACTAGTATGTTTTGTTCTGTTCTGTTTTATTTTATTATTTTGTGTTTGTCACAAAATGAATTAAAGTTGAATAGTGAAGTCTGCGCTGACGGCATCAGAATAAGCCATTTGAGTAGGTGAAGGATCAGAGAATTGCATCATAGAATTCACAATCGGTGGTGACATTAACGGCGTTGATGGCGGTGGAGGCAATGTCACATTTTGAGCAGCAGGCGCCATANATGGTGGTGGCGGTGGTGGTGGTGGTGTCGGCTGAGCAGATGGTGGAACATTCCGTGGTGATTCAACTGGTGTTTGTGTTTGTCCAGGTGGACTAATTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGTCCGGACGTTGATTAGGTGATGCATTCAACCTGACCACTGTTGTATTCGGCTGTTGCTGCTGTGGTGGTGGTGGTATTGGAGCTTGAAATTGAGGCCGAGGTGTTGGTTTTTGCATTGCTGGCGGTTGGAAATTTTGTT]
[+] EMBL CD120902 [AATGATTGATTAGAGTAAAATGAAACTGAAGATTAGTGTAATCTGGGATTACAATGTTAG AATTCTTTCGAAACCAATATAAATATTTAATTGATTATGGGTAAGCACTGATGATTCACTAGTATGTTTTGTTCTGTTCTGTTTTATTTTATTATTTTGTGTTTGTCACAAAATGAATTAAAGTTGAATAGTGAAGTCTGCGCTGACGGCATCAGAATAAGCCATTTGAGTAGGTGAAGGATCAGAGAATTGCATCATAGAATTCACAATCGGTGGTGACATTAACGGCGTTGATGGCGGCGGAGGCAATGTCACATTTTGAGCAGCAGGCGCCATA ]
[+] EMBL CD121021 [AATGATTGATTAGAGTAAAATGAAACTGAAGATTAGTGTAATCTGGGATTACAATGTTAG AATTCTTTCGAAACCAATATAAATATTTAATTGATTATGGGTAAGCACTGATGATTCACTAGTATGTTTTGTTCTGTTCTGTTTTATTTTATTATTATGTGTTTGTCACAAAATGAATTAAAGTTGAATAGTGAAGTCTGCGCTGACGGCATCAGAATAAGCCATTTGAGTAGGTGAAGGATCACAGAATTGCATCATATAATTCACAATCGGCGGTG ]
[+] EMBL CD187753 [ TACAATGTTAGAAATTCTTTCGAAACCAATATAAATATTTAATTGATTATGGGTAAGCACTGATGATTCACTAGTATGTTTTGTTCTGTTCTGTTTTATTTTATTATTTTGTGTTTGTCACAAAATGAATTAAAGTTGAATAGTGAAGTCTGCGCTGACGGCATCAGAATAAGCCATTTGAGTAGGTGAAGGATCAGAGAATTGCATCATAGAATTCACAATCGGTGGTGACATTAACGGCGTTGATGGCGGTGGAGGCAATGTCACATTTTGAGCAGCAGGCGCCATANATGGTGGTGGCGGTGGTGGTGGTGGTGTCGGCTGAGCAGATGGTGGAACATTCCGTGGTGATTCAACTGGTGTTTGTGTTTGTCCAGGTGGACTAATTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGTCCGGACGTTGATTANGTGATGCATTCAACC ]
[+] EMBL CD183839 [ GTGAAGGATCAGAGAATTGCATCATAGAATTCACAATCGGTGGTGACATTAACGGCGTTGATGGCGGTGGAGGCAATGTCACATTTTGAGCAGCAGGCGCCATAGATGGTGGTGGCGGTGGTGGTGGTGGTGTCGGCTGAGCAGATGGTGGAACATTCCGTGGTGATTCAACTGGTGTTTGTGTTTGTCCAGGTGGACTAATTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGTCCGGACGTTGATTAGGTGATGCATTCAACCTGACCACTGTTGTATTCGGCTGTTGCTGCTGTGGTGGTGGTGGTATTGGAGCTTGAAATTGAGGCCGAGGTGTTGGTTTTTGCATTGCTGGCGGTTGGAAATTTTGTT]
[-] EMBL CD130107 [ TGGCGGTGGTGGTGGTGGTGTCGGCTGAGCAGATGGTGGAACATTCCGTGGTGATTCAACTGGTGTTTGTGTTTGTCCAGGTGGACTAATTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGTCCGGACGTTGATTAGGTGATGCATTCAACCTGACCA ]
consensusID : consensus_10991#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 232 fasta sequence
[CYAGGCGCGTACCCGGTTGAACAGTGTGTGTAGTTGAATGT-AACTATCCTGGTTTGTAATGAATTTAGCATYTTTTGTAATTTTTTTTTAGTGGATTCATGTCATGTTATGTACTTTAGCGAATTCACCCGGTTACAGCATTGATGATAATAGTAATAATAATAACGATAGTTTTCAAAAGGGGAAGACATTCATGAAGCCAAATGCAAGTGTTGAGAATATGTTTAGTTTT]
[-] EMBL BE519391 [CYAGGCGCGTACCCGGTTGAACAGTGTGTGTAGTTGAATGT AACTATCCTGGTTTGTAATGAATTTAGCATYTTTTGTAATTTTTTTTTAGTGGATTCATGTCATGTTATGTACTTTAGCGAATTCACCCGGTTACAGCATTGATGATAATAGTAATAATAATAACGATAGTTTTCAAAAGGGGAAGACATTCATGAAGCCAAATGCAAGTGTTGAGAATATGTTTAGTTTT]
[+] EMBL CD120798 [ TTGAATGTAAACTATCTTGTTTTGTAATGAATTTAGCATTTTTTGTATTTTTTTTTTAGTGGATTCATGTCATGTTATGTACTTTAGCGAATTCACCCGGTTACAGCATTGATGATAATAGTAATAATAATAACGATAGTTTTCAAAAGGG ]
consensusID : consensus_10991#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 230 fasta sequence
[TGTAACCGGGTGTAATTCGCTAAAGTACATAACATGACATGAATCCACTAAAAAAAAATACAAAAAATGCTAAATTCATTACAAAACAAGATAGTTTACNTTCAACTACNCTCACTGAACAACAACTAGACAATATATNGCATGNCATNTTCNCTCAATTTATCGGNTTACGGGTTCACTTTTTNCCCGCCAATTACCTTTTCTCCNNCCGTCAACAGAAACGAAACGAA]
[+] EMBL AA559762 [TGTAACCGGGTGTAATTCGCTAAAGTACATAACATGACATGAATCCACTAAAAAAAAATACAAAAAATGCTAAATTCATTACAAAACAAGATAGTTTACNTTCAACTACNCTCACTGAACAACAACTAGACAATATATNGCATGNCATNTTCNCTCAATTTATCGGNTTACGGGTTCACTTTTTNCCCGCCAATTACCTTTTCTCCNNCCGTCAACAGAAACGAAACGAA]
consensusID : consensus_10991#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 228 fasta sequence
[ATTTGTGACTTATTTTTTACTATTTACAATGYTAYTTGAGATGATTATATATAAATAAACTTACTGGTCTTCTGGMCAGATCTGTYATCATTAAGATTTATACACACAGGCAAAACTAAACATATCCTCAACACTTGCATTTGGGTTCATGTATGTCTTCCCCTTNAGCCTTCGTTCAAACCATAAATTTATTACAAATAGAACGANATATGTNGTACATAGCGGACC]
[+] EMBL SMRAP154 [ATTTGTGACTTATTTTTTACTATTTACAATGYTAYTTGAGATGATTATATATAAATAAACTTACTGGTCTTCTGGMCAGATCTGTYATCATTAAGATTTATACACACAGGCAAAACTAAACATATCCTCAACACTTGCATTTGGGTTCATGTATGTCTTCCCCTTNAGCCTTCGTTCAAACCATAAATTTATTACAAATAGAACGANATATGTNGTACATAGCGGACC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10991#0 ATGTCATGTTATGTACTTTAGCGAATTCACCCGGTTACAGCATTGATGATAATAGTAATA 60
consensus_10991#1 ------------------------------------------------------------
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 ATAATAACGATAGTTTTCAAAAGGGGAAGACATACATGAAGCCAAATGCAAGTGTTGAGA 120
consensus_10991#1 ------------------------------------------------------------
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 ATATGTTTAGTTTTGCCTGTTTGTAAAAGCTTAATGATTGATTAGAGTAAAATGAAACTG 180
consensus_10991#1 --------------------------------AATGATTGATTAGAGTAAAATGAAACTG 28
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 AAGATTAGTGTAATCTGGGATTACAATGTTAGAATTCTTTCGAAACCAATATAAATATTT 240
consensus_10991#1 AAGATTAGTGTAATCTGGGATTACAATGTTAGAATTCTTTCGAAACCAATATAAATATTT 88
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 AATTGATTATGGGTAAGCACTGATGATTCACTAGTATGTTTTGTTCTGTTCTGTTTTATT 300
consensus_10991#1 AATTGATTATGGGTAAGCACTGATGATTCACTAGTATGTTTTGTTCTGTTCTGTTTTATT 148
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 TTATTATTTTGTGTTTGTCACAAAATGAATTAAAGTTGAATAGTGAAGTCTGCGCTGACG 360
consensus_10991#1 TTATTATTTTGTGTTTGTCACAAAATGAATTAAAGTTGAATAGTGAAGTCTGCGCTGACG 208
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 GCATCAGAATAAGCCATTTGAGTAGGTGAAGGATCAGAGAATTGCATCATTGTGTTGACA 420
consensus_10991#1 GCATCAGAATAAGCCATTTGAGTAGGTGAAGGATCAGAGAATTGCATCAT---------- 258
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 AAACCTATGAATTAGTCTGAAGAATTCACAATCGGTGGTGACATTAACGGCGTTGATGGC 480
consensus_10991#1 --------------------AGAATTCACAATCGGTGGTGACATTAACGGCGTTGATGGC 298
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 GGTGGAGGCAATGTCACATTTTGAGCAGCAGGCGCCATAGATGGTGGTGGCGGTGGTGGT 540
consensus_10991#1 GGTGGAGGCAATGTCACATTTTGAGCAGCAGGCGCCATANATGGTGGTGGCGGTGGTGGT 358
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 GGTGGTGTCGACTGAGCAGATGGTGGAACATTCCGTGG--TGATTCAACTGGTGTTTGTG 598
consensus_10991#1 GGTGGTGTCGGCTGAGCAGATGGTGGAACATTCCGTGG--TGATTCAACTGGTGTTTGTG 416
consensus_10991#2 -------CYAGGCGCGTACCCGGTTGAACAGTGTGTG---TAGTTGAAT--GTAACTATC 48
consensus_10991#3 --------------TGTAACCGG--GTGTAATTCGCTA--AAGTACATAACATG---ACA 39
consensus_10991#4 ------------------------------ATTTGTGACTTATTTTTTACTATTTACAAT 30
* * * *
consensus_10991#0 TTTGTCCAGGTGGACTAATTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGT 658
consensus_10991#1 TTTGTCCAGGTGGACTAATTGTTAATGGCTGTAACATTTGTATAGGCGGTGAAGGCTGGT 476
consensus_10991#2 CTGGTTT--GTAATGAATTTAGCATYTTTTGTAATTTTTTTTTAGTGGATTCATGTCATG 106
consensus_10991#3 TGAATCCACTAAAAAAAAATACAAAAAATGCTAAATTCATTACAAAACAAGATAGTTTAC 99
consensus_10991#4 GYTAYTTGAGATGATTATATATAAATAAACTTACTGGTCTTCT-GGMCAGATCTGTYATC 89
* * * ** * *
consensus_10991#0 CCGGACGTTGATTAGGTGATGCATTCAACCTGACCAC-TGTTGTATTCGGCTGTTGCTGC 717
consensus_10991#1 CCGGACGTTGATTAGGTGATGCATTCAACCTGACCAC-TGTTGTATTCGGCTGTTGCTGC 535
consensus_10991#2 TT--ATGTACTTTAGCGAATTCACCCGGTTACAGCAT-TGATGATAATAGTAATAATAAT 163
consensus_10991#3 NTTCAACTACNCTCACTGAACAA--CAACTAGACAATATATNGCATGNCATNTTCNCTCA 157
consensus_10991#4 ATTAAGATTTATACACACAGGCA--AAACTAAACATATCCTCAACACTTGCATTTGGGTT 147
* * * * * *
consensus_10991#0 TGTGGTGGTGGT-GGTATTGGAGCTTGAAATTGAGGCCGAGGTGTTGGTTTTTGCATTGC 776
consensus_10991#1 TGTGGTGGTGGT-GGTATTGGAGCTTGAAATTGAGGCCGAGGTGTTGGTTTTTGCATTGC 594
consensus_10991#2 AACGATAGTTTTCAAAAGGGGAAGACATTCATGAAGCCAAA-TGCAAGTGTTGAGAATAT 222
consensus_10991#3 ATTTATCGGNTT----ACGGGTTCACTTTTTNCCCGCCAAT-TACCTTTTCTCCNNCCGT 212
consensus_10991#4 CATGTATGTCTTCCCCTTNAGCCTTCGTTCAAACCATAAATTTATTACAAATAGAACGAN 207
* * * * * *
consensus_10991#0 TGGCG-GTTGGAAATTTTGTTGTTGATGTTGTTGTGCCTGATACTGTTGTGTATTTGGTG 835
consensus_10991#1 TGGCG-GTTGGAAATTTTGTT--------------------------------------- 614
consensus_10991#2 GTTTA-GTTTT------------------------------------------------- 232
consensus_10991#3 CAACA-GAAACGAAACGAA----------------------------------------- 230
consensus_10991#4 ATATGTNGTACATAGCGGACC--------------------------------------- 228
consensus_10991#0 CTGTTGTTTGTTTTTGATATTGAACATTATTCGGTTGAATATTTTGCGGTTGAGACTGTG 895
consensus_10991#1 ------------------------------------------------------------
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 GAGGTGGTGGTGTTCTTGGTGGTACACTAGAACGTCTATTAGTACGTAATTGTGATTGAA 955
consensus_10991#1 ------------------------------------------------------------
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 CACGTGAATAGAGATTTTCTGTTTCTTCAACATCTACACCAGCAGCAGACCGACCACGAT 1015
consensus_10991#1 ------------------------------------------------------------
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 TTTCAAGTTCTCGTTCTAAACGTCGTAAATCAAGTGCTTGAGCCTTTGGTTTACGAAAAG 1075
consensus_10991#1 ------------------------------------------------------------
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 CTGATGAAAGTTCATCGCTACATTTTACCTTTTTCAATTGTGCAAGTTTTTTGAATGGAT 1135
consensus_10991#1 ------------------------------------------------------------
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 TTTCTGGTTCAACATGACGTAGATCTGGTCGAAAATCTAATTGTGGTTCAATAATTAATA 1195
consensus_10991#1 ------------------------------------------------------------
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 TTGTTTCAGCTGCAGCTTCACCCATATTATTTCTTGCAACAGCTTTAATATGTAATTCAC 1255
consensus_10991#1 ------------------------------------------------------------
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 CAGGTGTACCAACACGATGAAATTCCAAATTACTAATACCACCATCTTGAAATATTCTCC 1315
consensus_10991#1 ------------------------------------------------------------
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 AATTTCCGCCACCTCCAGACGAGGCTATCAATTCCCCATTAATATACCAGAATATTTTAG 1375
consensus_10991#1 ------------------------------------------------------------
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 GCTTTGGATAACCACCTGCTTTAACAAGAAATTTAACTGGCGAACCTTCAGTGACAGTGA 1435
consensus_10991#1 ------------------------------------------------------------
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 CAGCAACAGGGAGAATATCGAATGATGGTGCACATGGCGGTTCTTCTTCATCTCTTTTAA 1495
consensus_10991#1 ------------------------------------------------------------
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 CTGTATCATAACCTGCCATGGCATCACTTTCCCAAGCATCCAAACTTTGAAGATATGAAA 1555
consensus_10991#1 ------------------------------------------------------------
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 TTGATTCTTTCGATAATACTGAACTAGTGACAATATGTTCATCCGCATTACATTGTAATT 1615
consensus_10991#1 ------------------------------------------------------------
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 CAACCACATTGCTTTGTACTTGTCCTGCTGCATTACGTGTTAATGGCTGTAACATTTGTA 1675
consensus_10991#1 ------------------------------------------------------------
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 TAGGCGGTGAAGGCTGGTCCGGACGTTGATTAGGTGATGCATTCAACCTGACCACTGTTG 1735
consensus_10991#1 ------------------------------------------------------------
consensus_10991#2 ------------------------------------------------------------
consensus_10991#3 ------------------------------------------------------------
consensus_10991#4 ------------------------------------------------------------
consensus_10991#0 TATTCG 1741
consensus_10991#1 ------
consensus_10991#2 ------
consensus_10991#3 ------
consensus_10991#4 ------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||