These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10994#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 25 consensus length = 1011 fasta sequence [GGTCAACTGAAGGTCTAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA-AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC-AAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGATTCTCAGTTATTGGACTCTTCAGGACCAAACCAAGTAAACCTATCGACATACAATCCAAATCAATCTAATGATTTAAAAGCTTTATTACATTCTAAGGAGGAAAACTTCAGATATCTAAGTCGTACATACTTAAGAAAGTGGCACAACAAAAGATGGGCCAACCATGACTTCTTCAAGGAGTTTTTCACTTCACACTACAAATATAAACTGAATCAAGATGGAAATGAATATCGTTATAGTGGTCTTTCGCGATTAGACAAAGCAATAACTCATTCACTTGAGTCTAGAAGGAATCCCGATGGAACTCTTAAGCAACCAAATTGCAATCGTTTTGATGCTGATTGGAATACTTATCCTTGGTCAAGATATTGAAATTTGAAGTTGTCGGTTTTAGATTCTCTTGCGACGATCGTTTCCAGCTGTGTACAAATACTTAATATATTTAGGA] [+] EMBL CD078825 [GGTCAACTGAAGGTCTAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACACAAAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTNTTCAGACACAGGGGTCTTTCTGTTGATTCTCAGTT ] [+] EMBL CD078978 [ TGAAGGTCTAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACACAAAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGATTCTCAGTTATTGGACTCTTCAGGACCAAACCAAGTAAACCTATCGACATACAATCCANATCAATCTAATGATTTA ] [+] EMBL AI067241 [ AAGGTCTAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC AAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGG ] [+] EMBL AI068066 [ AAGGTCTAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC ] [+] EMBL AI068129 [ AAGGTCTAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC AAATATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCG ] [+] EMBL AI067688 [ AAGGTCTAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGATAAATATGGTCTTGGAAAGGACAC ANAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTC ] [+] EMBL AI067488 [ AAGGTCTAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC AAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACA ] [+] EMBL AI067984 [ AAGGTCTAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC AAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTANACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGA ] [+] EMBL AI067365 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC AAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGATTCTCAGTTATTGGACTCTTCAGGACCAAACCAAGTAAACCTATCGACATACAATCCAAATCAATCTAAT ] [+] EMBL AI068299 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTC ] [+] EMBL AI068000 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC AAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGATTCTCAGTTATTGGACTCTTCAGGACCAAACCAAGTAAACCTATCGA ] [+] EMBL AI067171 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC AAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGATTCTC ] [+] EMBL AI067916 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGATAAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC AAGAATCACAATTGGATAGATGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGGCAACTGAATCcg ] [+] EMBL AI068056 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC AAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCC ] [+] EMBL AI067515 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC AAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATA ] [+] EMBL AI068044 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC AAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAA ] [+] EMBL AI067336 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC ANAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTA ] [+] EMBL AI067096 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGG AAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC A ] [+] EMBL AI068103 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGNAAGGAC ] [+] EMBL AI067387 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGT ] [+] EMBL CD078457 [ TCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACACAAAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGATTCTCAGTTATTGGACTCTTCAGGACCAAACCAAGTAAACCTATCGACATACAATCCAAATCAATCTAATGATTTAAAAGCTNTATTACATTCTA ] [-] EMBL CD073429 [ AAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTTTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACACAAAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATTTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGATTCTCAGTTATTGGACTCTTCAGGACCAAACCAAGTAAACCTATCGACATACAATCCAAATCAATTTAATGATTTAA ] [-] EMBL CD073285 [ TCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTT TTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGATTCTCAGTTATTGGACTCTTCAGGACCAAACCAAGTAAACCTATCGACATACAATCCAAATCAATCTAATGATTTAAAAGCTTTATTACATTCTAAGGAGGAAAACTTCAGATATCTAAGTCGTACATACTTAAGAAAGTGGCACAACAAAAGATGGGCCAACCATGACTTCTTCAAGGAGTTTTTCACTTCACACTACAAATATAAACTGAATCAAGATGGAAATGAATATCGTTATAGTGGTCTTTCGCGATTAGACAAAGCAATAACTCATTCACTTGAGTCTAGAAGGAATCCCGATGGAACTCTTAAGCAACCAAATTGCAATCGTTTTGATGCTGATTGGAATACTTATCCTTGGTCAAGATATTGAAATTTGAAGTTGTCGGTTTTAGATTCTCTTGCGACGATCGTTTCCAGCTGTGTACAAATACTTAATATATTTAGGA] [-] EMBL CD197157 [ TTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGATTCTCAGTTATTGGACTCTTCAGGACCAAACCAAGTAAACCTATCGACATACAATCCAAATCAATCTAATGATTTAAAAGCTTTATTACATTCTAAGGAGGAAAACTTCAGATATCTAAGTCGTACATACTTAAGAAAGTGGCACAACAAAAGATGGGCCAACCATGACTTCTTCAAGGAGTTTTTCACTTCACACTACAAATATAAACTGAATCAAGATGGAAATGAATATCGTTATAGTGGTCTTTCGCGATTAGACAAAGCAATAACTCATTCACTTGAGTCTAGAAGGAATCCCGATGGAACTCTTAAGCAACCAAATTGCAATCGTTTTGATGCTGATTGGAATACTTATCCTTGGTCAAGATATTGAAATTTGAAGTTGTCGG ] [-] EMBL CD139795 [ GGAGGAAAACTTCAGATATCTAAGTCGTACATACTTAAGAAAGTGGCACAACAAAAGATGGGCCAACCATGACTTCTTCAAGGAGTTTTTCACTTCACACTACAAATATAAACTGAATCGAGATGGAAATGAATATCGTTATAGTGGTCTTTCGCGATTAGACAAAGCAATAACTCATTCACTTGAGTCTAGAAGGAATCCCGATGGAACTCTTAAGCAACCAAATTGCAATCGTTT ] consensusID : consensus_10994#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 860 fasta sequence [CCTNCGCAGGCCAAAAATTCGGCACGAGGTCAGAAAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCNACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGANAAATATGGNTCTTGGAAAGGACACAAAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATNAAACATCTTATTCGGATACAGCCTNGTATTTTCGAGAACGGGTGCCCAACTGATCTGATTTACTTGCCTGTAAACTGCTTCCGGATGGCAGATTTTTCAGACNCAGGGGTCTTTTCTGTGATCCTAANTATTGGACTCTCCGGACCAACCAATTAAACTATTGACTTCAATCCAATCATTTAAGGATTAAAACCTTATTACTTTTAAGGGGGAAACTCAAATTTTAAGCGCAATCCTTAAAAGGGGCCACCAAAAAAGGCCCCCTAGATTTTAGGGAATTTTCTTCCCTCCATATTCCCTGACAAAGGGAGAATTTTTTAAGGGTTTTCCAATAAAAAAAATACTTTCTTTTTTAAAGGCCCCGGGATTTTTACCACAAGGCNNTTTTAGGTGGAGAATTCCTTGGCAAAATAAAAAAAGAGGGTTTAATTTTAGAAAACTCCGGGGGGC] [+] EMBL CD080000 [CCTNCGCAGGCCAAAAATTCGGCACGAGGTCAGAAAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCNACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGANAAATATGGNTCTTGGAAAGGACACAAAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATNAAACATCTTATTCGGATACAGCCTNGTATTTTCGAGAACGGGTGCCCAACTGATCTGATTTACTTGCCTGTAAACTGCTTCCGGATGGCAGATTTTTCAGACNCAGGGGTCTTTTCTGTGATCCTAANTATTGGACTCTCCGGACCAACCAATTAAACTATTGACTTCAATCCAATCATTTAAGGATTAAAACCTTATTACTTTTAAGGGGGAAACTCAAATTTTAAGCGCAATCCTTAAAAGGGGCCACCAAAAAAGGCCCCCTAGATTTTAGGGAATTTTCTTCCCTCCATATTCCCTGACAAAGGGAGAATTTTTTAAGGGTTTTCCAATAAAAAAAATACTTTCTTTTTTAAAGGCCCCGGGATTTTTACCACAAGGCNNTTTTAGGTGGAGAATTCCTTGGCAAAATAAAAAAAGAGGGTTTAATTTTAGAAAACTCCGGGGGGC] consensusID : consensus_10994#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 737 fasta sequence [GAGCCAGATTCGGCCGAGGCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGCCTTGGAAAGGACACAANAAATCACAATTGGATAGTTCGTCAATTACCTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGATCCCAGTTATTGGACTCTTCAGGACCANACCAAGTANACCTATCGACATANCATCCANATCAATCTAATGATTTANNAGCTNTATTACATTCTANGGAGGANNACTNCAGATATCTAAGTCGTACATACTTANGAAAGTGGGCACAACAAAGAATGGCCCAACCATGACTNNNCTCAAGGAGNTNTTTACTTCACACTACAAATTTTAACTGAATCAGAATGGAAATGAATATCCGTATTANGGGTCCTTCGCGATTTAACCAAGCCATAACTATTCCCTTGATCTTAAAAGGGATCCCAAGGGACCTTTAACACCCCAATGGGANCGGTTGGAACCCGAAGGGAACCTTACCCGTGACAAAATTGAAATTGAAATTGCCGTTTTAAATTTTTGGCAAAAAGTTCCCGGTTGGCAATTTTTATTTTTTGGAATAAATT] [+] EMBL CD080029 [GAGCCAGATTCGGCCGAGGCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGCCTTGGAAAGGACACAANAAATCACAATTGGATAGTTCGTCAATTACCTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGATCCCAGTTATTGGACTCTTCAGGACCANACCAAGTANACCTATCGACATANCATCCANATCAATCTAATGATTTANNAGCTNTATTACATTCTANGGAGGANNACTNCAGATATCTAAGTCGTACATACTTANGAAAGTGGGCACAACAAAGAATGGCCCAACCATGACTNNNCTCAAGGAGNTNTTTACTTCACACTACAAATTTTAACTGAATCAGAATGGAAATGAATATCCGTATTANGGGTCCTTCGCGATTTAACCAAGCCATAACTATTCCCTTGATCTTAAAAGGGATCCCAAGGGACCTTTAACACCCCAATGGGANCGGTTGGAACCCGAAGGGAACCTTACCCGTGACAAAATTGAAATTGAAATTGCCGTTTTAAATTTTTGGCAAAAAGTTCCCGGTTGGCAATTTTTATTTTTTGGAATAAATT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10994#0 GGTCAACTGAAGGTCTAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACAT 60 consensus_10994#2 ------------------------------------------------------------ consensus_10994#1 -------------------------------CCTNCGCAGGCCAAAAATTCGGCACGAGG 29 consensus_10994#0 TCAGAAAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGT 120 consensus_10994#2 ------------------------------------------------------------ consensus_10994#1 TCAGAAAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGT 89 consensus_10994#0 TGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAA 180 consensus_10994#2 ------------------------------------------------------------ consensus_10994#1 TGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAA 149 consensus_10994#0 CCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAA 240 consensus_10994#2 ------------------------------------------------------------ consensus_10994#1 CCACTTCCTGGGAGTGATGAGGAAAAAA-TCCATTGAGATGGGCCAAACGTCTATTCCAA 208 consensus_10994#0 CTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTC 300 consensus_10994#2 ------------------GAGCCAGATTCGGCCGAGG------CTTTACTGCATATGGTC 36 consensus_10994#1 CTGCAAGAATCTCNACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTC 268 ** * ** *** ***************** consensus_10994#0 TGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATAT 360 consensus_10994#2 TGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATAT 96 consensus_10994#1 TGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGANAAATAT 328 ***************************************************** ****** consensus_10994#0 GGT-CTTGGAAAGGACACAAAAA-TCACAATTGGATAGTT-GTCAAAAATACTCCGTCAG 417 consensus_10994#2 GGC-CTTGGAAAGGACACAANAAATCACAATTGGATAGTTCGTCAATTAC-CTCCGTCAG 154 consensus_10994#1 GGNTCTTGGAAAGGACACAAAAAATCACAATTGGATAGTT-GTCAAAAATACTCCGTCAG 387 ** **************** ** **************** ***** * ********* consensus_10994#0 TCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGA 477 consensus_10994#2 TCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGA 214 consensus_10994#1 TCAACCGAGATTTATACGAGATNAAACATCTTATTCGGATACAGCCTNGTATTTTCGAGA 447 ********************** ************************ *********** consensus_10994#0 ACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTT 537 consensus_10994#2 ACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTT 274 consensus_10994#1 ACGGGTGCCCAACTGA-TCTGATTTACTTGCCTGTAAACTGCTTCCGGATGGCAGATTTT 506 ****** ******** ******************* *********************** consensus_10994#0 TCAGACACAGGGGTCTTTCTGTTGATTCTCAGTTATTGGACTCTTCAGGACCAAACCAAG 597 consensus_10994#2 TCAGACACAGGGGTCTTTCTGTTGAT-CCCAGTTATTGGACTCTTCAGGACCANACCAAG 333 consensus_10994#1 TCAGACNCAGGGGTCTTTTCTGTGAT-CCTAANTATTGGACTCTCC-GGACCAA-CCAAT 563 ****** *********** **** * * *********** * ****** **** consensus_10994#0 TAAACCTATCGACATACAATCCAAATCAATCTAATGATTTAAAAGCTTTATTACATTCTA 657 consensus_10994#2 TANACCTATCGACATANCATCCANATCAATCTAATGATTTANNAGCTNTATTACATTCTA 393 consensus_10994#1 TAAAC-TATTGAC-TTCAATCCAATC--ATTTAAGGATT--AAAACCTTATTAC-TTTTA 616 ** ** *** *** * ***** ** *** **** * * ****** ** ** consensus_10994#0 AGGAGGAAAACTTCAGATATCTAAGTCGTACATACTTAAGAAAGTGG-CACAACAAAAGA 716 consensus_10994#2 NGGAGGANNACTNCAGATATCTAAGTCGTACATACTTANGAAAGTGGGCACAACAAAGAA 453 consensus_10994#1 AGGGGGAAA--CTCAAAT-TTTAAG-CGCA-ATCCTTAA--AAGGGGCCAC--CAAAAAA 667 ** *** ** ** * **** ** * ** **** *** ** *** **** * consensus_10994#0 TGGGCCAACCATGACTTCT-TCAAGGAGTTTTTCACTTCACACTACAAATATAAACTGAA 775 consensus_10994#2 TGGCCCAACCATGACTNNNCTCAAGGAGNTNTTTACTTCACACTACAAATTTTAACTGAA 513 consensus_10994#1 GGCCCC--------CTAGATTTTAGGGAATTTT--CTTCCCTCCATATTCCCTGACAAAG 717 * ** ** * *** * ** **** * * * * ** * consensus_10994#0 TCAAGATGG---AAATGAATATCGTTAT-AGTGGTCTTTCGCGATTAGACAAAGCAATAA 831 consensus_10994#2 TCAGAATGG---AAATGAATATCCGTATTANGGGTCCTTCGCGATTTAACCAAGCCATAA 570 consensus_10994#1 GGAGAATTTTTTAAGGGTTTTCCAATAAAAAAAATACTTTCTTTTTTAAAGGCCCCGGGA 777 * ** ** * * * ** * * ** ** * * * consensus_10994#0 CTCATTCACTTGAGTCTAGAAGGAATCCCGATGGAACTCTTAAGCAACCAAATTGCAATC 891 consensus_10994#2 CT-ATTCCCTTGATCTTAAAAGGGATCCCAAGGGA--CCTTTAACACCCCAAT-GGGANC 626 consensus_10994#1 TT-TTTACCACAAGGCNNTTTTAGGT----GGAGAATTCCTTGGCAAAATAAAAAAAGAG 832 * ** * * * ** * * ** ** consensus_10994#0 GTTTTGATGCTGATTGGAATACTTATCCTTGGTCAAGATATTGAAATTTGAAGTTGTCGG 951 consensus_10994#2 GGTTGGAACCCGAAGGGAAC-CTTACCCGTGACAAA---ATTGAAATT-GAAATTGCCG- 680 consensus_10994#1 GGTTTAATTTT--AGAAAACTCCGGGGGGC------------------------------ 860 * ** * ** * consensus_10994#0 TTTTAGATTCTCTTGCGACGATCGTTTCCAGCTGTGTACAAATACTTAATATATTTAGGA 1011 consensus_10994#2 TTTTAAATT-TTTGGCAAAAA--GTTCCCGGTTGGCAATTTTTATTTTTTGGAATAAATT 737 consensus_10994#1 ------------------------------------------------------------ |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||