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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10999#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 23 consensus length = 635 fasta sequence
[AACTTGTTTCACATTATCAGCGTTACAACTCAGTGCGCCTCGTTTGTTTCTCATCATGATCGTGTATAAGGATATGATCACTGAGGATGAAATGTTCACA-GACTCGCACTGT-CCTCGTGTTGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGATACGAGCAAAAGGGTCATTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCGTTTGCAAAAGACTGATCCAGACAAAGTTCCCTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTG-ATAACTTTGACCAATATGAGTTTTACATGGGTCCGTCATCTAATCCTGATGCCATGATAGTTTTGATGAATTTCCGTGAGGACGGTATGACACCATACTTCGTTTTCTTCAAGGATGGATTAACTCAGGAAAAATATTGAGGCGCTTCGTCTTCAGAATTTTGGGATTCATG-AACATCATCTTGTAATTTATAAATACANTGTGCTA]
[+] EMBL CD179692 [AACTTGTTTCACATTATCAGCGTTACAACTCAGTGCGCCTCGTTTGTTTCTCATCATGATCGTGTATAAGGATATGATCACTGAGGATGAAATGTTCACA GACTCGCACTGTCCCTCGTGTTGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTATATGGAAGACTTATTGGCGCCAACCCATCT ]
[+] EMBL CD132938 [ AGCGTTACAACTCAGTGCGCCTCGTTTGTTTCTCATCATGATCGTGTATAAGGATATGATCACTGAGGATGAAATGTTCACA GACTCGCACTGT CCTCGTGTTGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGATACGAGCAAAAGGGTCATTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCG TTGCA ]
[+] EMBL CD135747 [ GCGTTACAACTCAGTGCGCCTCGTTTGTTTCTCATCATGATCGTGTATAAGGATATGATCACTGAGGATGAAATGTTCACA GACTCGCACTGT CCTCGTGTTGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGATACGAGCAAAAGGGTCATTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCGTTTGCAAAAGACTGATCCAGACAAAGTTCCCTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTG ATAACTTTGACCAATATGAGTTTTACATGGGTCCGTCATCTAATCCTGATGCCATGATAGTTTTGATGAATTTCCGTGAGGACGGTATGACGCCATACTTCGTTTTCTTCAA GATGGATTAACTCAGGAAAAATATTGAGGCGCTTCGTCTTCAGAATTTTGGGATTCATG AACATCATCTTGTAATT ]
[+] EMBL CD092004 [ GCGTTACAACTCAGTGCGCCTCGTTTGTTTCTCATCATGATCGTGTATAAGGATATGATCACTGAGGATGAAATGTTCACA GACTCGCACTGT CCTCGTGTTGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGATACGAGCAAAAGGGTCATTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCGTTTGCGAAAGACTGATCCAGACAAAGTTCCCTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTG ATAACTTTGACCAATATGAGTTTTACATGGGTCCGTCATCTAATCCTGATGCCATGATAGTTTTGATGAATTTCCGTGAGGACGGTATGACACCATACTTCGTTTTCTTCAAG ]
[-] EMBL CD189240 [ GCGTTACAACTCAGCGCGCCTCGTTTGTTTCTCATCATGATCGTGTATAAGGATATGATCACTGAGGATGAAATGTTCACA GACTCGCACTGT CCTCGTGTTGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGATACGAGCAAAAGGGTCATTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCGTTTGCAA ]
[+] EMBL CD097248 [ GCGTTACAACTCAGTGCGCCTCGTTTGTTTCTCATCATGATCGTGTATAAGGATATGATCACTGAGGATGAAATGTTCACA GACTCGCACTGT CCTCGTGTTGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGATACGAGCAAAAGGGTCATTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCGTTTGCAAAAGACTGATCCAGACAAAGTTCCCTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTG ATAACTTTGACCAATAT ]
[-] EMBL CD091982 [ CGTTACAACTCAGTGCGCCTCGTTTGTTTCTCATCATGATCGTGTATAAGGATATGATCACTGAGGATGAAATGTTCACA GACTCGCACTGT CCTCGTGTTGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGATACGAGCAAAAGGGTCATTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCGTTTGCAAAAGACTGATCCAGACAAAGTTCCCTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTG ATAACTTTGACCAATATGAGTTTTACATGGGTCCGTCATCTAATCCTGATGCCATGATAGTTTTGATGAATTTCCGTGAGGACGGTATGACACCATACTTCGTTTTCTTCAAGG ]
[+] EMBL AA559731 [ TGTTTCTCATCATGATCGTGTATAAGGATATGATCACTGAGGATGAAATGTTCACA GACTCGCACTGT CCTCGTGTTGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAANATGAAAATGTGGATGATACGANCAAAAGGGTCNTTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAAT ]
[-] EMBL CD121601 [ ATCAT ATCCT TAT ACACGATCA TGATGA GAAA CAAACGAGGCGCACTGT CCTCGTGTTGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGATACGAGCAAAAGGGTCATT ATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCGTTTGCAAAAGACTGATCCAGACAAAGTTCCCTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTG ATAACTTTGACCAATATGAGTTTTACATGGGTCCGT ]
[+] EMBL CD134571 [ GATCGTGTATAAGGATATGATCACTGAGGATGAAATGTTCACA GACTCGCACTGT CCTCGTGTTGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGATACGAGCAAAAGGGTCATTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCGTTTGCAAAAGACTGATCCAGACAAAGTTCCCTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTG ATAACTTTGACCAATATGAGTTTTACATGGGTCCGTCATCTAATCCTGATGCCATGATAGTTTTGATGAATTTCCGTGAGGACGGTATGACACCATACTTCGTTTTCTTCAAGGATGGATTAACTCANGAAAAATATTGAGGCGCTTCGTCTTCAGAATTTTGGGATTCATG AACATCATCTTGTAAT ]
[+] EMBL AF358139 [ TATAAGGATATGATCACTGAGGATGAAATGTTCACA GACTCGCACTGT CCTCGTGTTGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGATACGAGCAAAAGGGTCATTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCGTTTGCAAAAGACTGATCCAGACAAAGTTCCCTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTG ATAACTTTGACCAATATGAGTTTTACATGGGTCCGCCATCTAATCCTGATGCCATGATAGTTTTGATGAATTTCCGTGAGGACGGTATGACACCATACTTCGTTTTCTTCAAGGATG ]
[-] EMBL CD097218 [ AAGGATATGATCACTGAGGATGAAATGTTCACA GACTCGCACTGT CCTCGTGTTGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGATACGAGCAAAAGGGTCATTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCGTTTGCAAAAGACTGATCCAGACAAAGTTCCCTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTG ATAACTTTGACCAATATGAGTTTTACATGGGTCCGTCATCTAATCCTGATGCCATGATAGTTTTG ]
[-] EMBL CD121545 [ cttatacacGATCA TGATGA GAAA CAAACGAGGCGCACTGT CCTCGTGTTGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGATACGAGCAAAAGGGTCATT ATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCGTTTGCAAAAGACTGATCCAGACAAAGTTCCCTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTG ATAACTTTGACCAATATGAGTTTTACATGGGTCCGT ]
[+] EMBL CD179821 [ TCACTGAGGATGAAATGTTCACA GACTCGCACTGT CCTCGTGTTGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGATACGAGCAAAAGGGTCATTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCGTTTGCAAAAGACTGATCCAGACAAAGTTCCCTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTG ATAACTTTGACCAATATGAGTTTTACATGGGTCCGTCATCTAATCCTGATGCCATGATAGTTTTGATGAATTTCCGTGAGGACGGTATGACACCATACTTCGTTTTCTTCAAG ]
[-] EMBL CD097258 [ TGTTCACA GACTCGCACTGT CCTCGTGTTGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGATACGAGCAAAAGGGTCATTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCGTTTGCAAAAGACTGATCCAGACAAAGTTCCCTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTG ATAACTTTGACCAATATGAGTTTTACATGGGTCCGTCATCTAATCCTGATGCCATGATAGTTTTG ]
[+] EMBL CD161543 [ ccCTCGCACTGT CCTCGTGTTGTCGCGGATTTCTTTTATGAAGACGACTCGAGGGTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAATATGAAAATGTGGATGATACTAGCAGAAGGGCCGATGATTTATTTCACGCTAATGGTTGCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCGTTTGCAAAAGACTGATCCAGACAAAGGTCCCTTACTTAAATCTCACGTCAACAAGTACATGAAGAATGTCCTTG ATAACTTTGACCAATATGAGTTTTACATGGGTCCGTCATCTAATCCTGATGCCATGATAGTTTTGA ]
[+] EMBL CD200248 [ aGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGATACGAGCAAAAGGGTCATTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCGTTTGCAAAAGACTGATCCAGACAAAGTTCCCTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTG ATAACTTTGACCAATATGAGTTTTACATGGGTCCGTCATCTAATCCTGATGCCATGATAGTTTT ]
[+] EMBL CD161904 [ TTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGATACGAGCATAAGGGTCATTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCGTTTGCAAAAGACTGATCCAGACAAAGTTCCCTTACTTAAACCTCAGGTCAACAAGTACATGAAGAATGTCCTTG ATAACTTTGACCAATATGAGTTTTACATGGGTCCGTCATCTAATCCTGATGCCATGATAGTTTTGATGAATTTCCGTGAGGACGGTATGACACCATACTTCGTTNTCTTCAAG ]
[-] EMBL CD144924 [ TTCAAGTAATGTAGATGGAAGACTTATGGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGATACGAGCAAAAGGGTCATTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCGTTTGCAAAAGACTGATCCAGACAAAGTTCCCTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTG ATAACTTTGACCAATATGAGTTTTACATGGGTCCGTCATCTAATCCTGATGCCATGATAGTTTTGATGAATTTCCGTGAGGACGGTATGACACCATACTTCGTTTTCTTCAAGGATGGATTAACTCAGGAAAAATATTGAGGC ]
[-] EMBL CD166104 [ TGGATGATACGAGCAAAGGNGTCATTGATNTAGTTCACGCTAATGGTNTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCGTTTGCAAAAGACTGATCCAGACAAGGTTCCCTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTG ATAACTTTGACCAATATGAGTTTTACATGGGTCCGTCATCTAATCCTGATGCCATGATAGTTTTGATGAATTTCCGTGAGG ]
[+] EMBL CD185852 [ GAGCAAAAGGGTCATTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCGTTTGCAAAAGACTGATCCAGACAAAGTTCCCTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTG ATAACTTTGACCAATATGAGTTTTACATGGGTCCGTCATCTAATCCTGATGCCATGATAGTTT ]
[+] EMBL SM6211 [ CCTTGNATAACTTTGACCAATATGAGTTTTACATGGGTCCGCCATCTAATCCTGATGCCATGATAGTTTTGATGAATTTCCGTGAGGACGGTATGACACCATACTTCGTTTTCTTCAAGGATGGATTAACTCAGGAAAAATATTGAGGCGCTTCGTCTTCAGAATTTTGGGATTCATGAAACATCATCTTGTAATTTATAAATACANTGTGCTA]
[+] EMBL SMAA43888 [ AATTTCCGTGAGGACGGTATGACACCATACTTCGTTTTCTTCAAGGATGGATTAACTCAGGAAAAATATTGAGGCGCTTCGTCTTCAGAATTTTGGGATTCATG AACATCATCTTGTAATTTATAAATACAATGTGCTA]
consensusID : consensus_10999#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 449 fasta sequence
[CAGCGTTACAACTCAGTGCGCCTCGTTTGTTTCTCATCATGATCGTGTATAAGGATATGATCACTGAGGATGAAATGTTCACAGACTCGCACTGTCCTCGTGTTGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGATACGAGCAA-AAGGGTCATTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAA-AGATCATACAAAGCGCATCTTAATAGCGTTTGCAAAAGACTGATTCAGACAAAGTTCCCTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTGATAACTTTGACCAATATGAGTTTTACATGGGTCCGTCATCTAATTCTGATGCCATGATAG]
[+] EMBL CD097256 [CAGCGTTACAACTCAGTGCGCCTCGTTTGTTTCTCATCATGATCGTGTATAAGGATATGATCACTGAGGATGAAATGTTCACAGACTCGCACTGTCCTCGTGTTGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGATACGAGCAA AAGGGTCATTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAA AGATCATACAAAGCGCATCTTAATAGCGTTTGCAAAAGACTGATTCAGACAAAGTTCCCTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTGATAACTTTGACCAATATGAGTTTTACATGGGTCCGTCATCTAATTCTGATGCCATGATAG]
[+] EMBL SM681 [ TGTATAAGGNTATGATCACTGAGGATGAAATGTTCACAGACTCGCACTGTCCTCGTGTTGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGNAGATGAAAATGTGGATGATACGAGCAACCAGGGTCATTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAGTGATCATACANAGCGCATCTTAAgct ]
consensusID : consensus_10999#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 416 fasta sequence
[CTCGAGGCANGATCGGCACGAGGTTTGTTTCTCATCATGATCGTGTATAGGATATGATCACTGAGGATGAAATGTTCACAGACTCGCACTGTCCTCGTGTTGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGATACGAGCAAAAGGGTCATTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCGTTTGCAAAAGACTGATCCAGACAAAGTTCCCTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTGATAACTTT]
[+] EMBL CD084127 [CTCGAGGCANGATCGGCACGAGGTTTGTTTCTCATCATGATCGTGTATAGGATATGATCACTGAGGATGAAATGTTCACAGACTCGCACTGTCCTCGTGTTGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGATACGAGCAAAAGGGTCATTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCGTTTGCAAAAGACTGATCCAGACAAAGTTCCCTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTGATAACTTT]
[+] EMBL CD132386 [ TGAAATGTTCACAGACTCGCACTGTCCTCGTGTTGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGATGGAAGACTTATTGGCGCCAACCCATCTGGCGAGGGTGGAGAAGATGAAAATGTGGATGATACGAGCAAAAGGGTCATTGATTTAGTTCACGCTAATGGTTTCATTAGTGTTCCTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGCGTTTGCA ]
consensusID : consensus_10999#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 326 fasta sequence
[AGGCGCTTCGTCTTCAGAATTTTGGGATTCATGAACATCATCTTGTAATTTTATAATAGAGCGTTTGCAAAAGACTGATCCAGACAAAGTTCCCTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTGATAACTTTGACCAATATGAGTTTTACATGGGTCCGTCATCTAATCCTGATGCCATGATAGTTTTGATGAATTTCCGTGAGGACGGTATGACACCATACTCCGTTTTCTTCAAGGATGGATTAACTCAGGAAAAATATTGAGGCGCTTCGTCTTCAGAATTTTGGGATTCATGAACATCATCTTGTAATT]
[+] EMBL CD066657 [AGGCGCTTCGTCTTCAGAATTTTGGGATTCATGAACATCATCTTGTAATTTTATAATAGAGCGTTTGCAAAAGACTGATCCAGACAAAGTTCCCTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTGATAACTTTGACCAATATGAGTTTTACATGGGTCCGTCATCTAATCCTGATGCCATGATAGTTTTGATGAATTTCCGTGAGGACGGTATGACACCATACTCCGTTTTCTTCAAGGATGGATTAACTCAGGAAAAATATTGAGGCGCTTCGTCTTCAGAATTTTGGGATTCATGAACATCATCTTGTAATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10999#1 -----------------CAGCGTTACAACTCAGTGCGCCTCGTTTGTTTCTCATCATGAT 43
consensus_10999#2 ----------------CTCGAGGCANGA-TCGGCACGAG--GTTTGTTTCTCATCATGAT 41
consensus_10999#0 AACTTGTTTCACATTATCAGCGTTACAACTCAGTGCGCCTCGTTTGTTTCTCATCATGAT 60
consensus_10999#3 ------------------------------------------------------------
consensus_10999#1 CGTGTATAAGGATATGATCACTGAGGATGAAATGTTCACAGACTCGCACTGTCCTCGTGT 103
consensus_10999#2 CGTGTATA-GGATATGATCACTGAGGATGAAATGTTCACAGACTCGCACTGTCCTCGTGT 100
consensus_10999#0 CGTGTATAAGGATATGATCACTGAGGATGAAATGTTCACAGACTCGCACTGTCCTCGTGT 120
consensus_10999#3 ----------------------AGGCGCTTCGTCTTCAGAATTTTGGGATTCATGAACAT 38
* * **** * * * * *
consensus_10999#1 TGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGA 163
consensus_10999#2 TGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGA 160
consensus_10999#0 TGTCGCGGATTTCTTTTATGAAGTCGACTCGAGGTTTACGACAGTTTCAAGTAATGTAGA 180
consensus_10999#3 CATCTTGTAATTTTATAATAGAGCGTTTGCAA-----AAGACTGATCCAGACAAAGTTCC 93
** * * ** * * ** ** * * * *** * * ** ** **
consensus_10999#1 TGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGA 223
consensus_10999#2 TGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGA 220
consensus_10999#0 TGGAAGACTTATTGGCGCCAACCCATCTGGTGAGGGTGGAGAAGATGAAAATGTGGATGA 240
consensus_10999#3 CTTACTTAAATCTCAGGTCAACAAGTACATGAAGAATGTCCTTGAT--AACTTTGACCAA 151
* * * **** * ** ** *** ** * ** *
consensus_10999#1 TACGAGC---AAAAGGGTCATTGATTTAGTTC--ACGCTA--ATGGTTTCATTAGTGTTC 276
consensus_10999#2 TACGAGC---AAAAGGGTCATTGATTTAGTTC--ACGCTA--ATGGTTTCATTAGTGTTC 273
consensus_10999#0 TACGAGC---AAAAGGGTCATTGATTTAGTTC--ACGCTA--ATGGTTTCATTAGTGTTC 293
consensus_10999#3 TATGAGTTTTACATGGGTCCGTCATCTAATCCTGATGCCATGATAGTTTTGATGAATTTC 211
** *** * * ***** * ** ** * * * ** * ** **** * ***
consensus_10999#1 CTTTCGACCAAAGATCATACAAAGCGCATCTTAAT----------------------AGC 314
consensus_10999#2 CTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGC 333
consensus_10999#0 CTTTCGACCAAAAATCATACAAAGCGCATCTTAATCTGTATTTAAAAACTATAATAGAGC 353
consensus_10999#3 CGTGAGGACGGT-ATGACACCATACTCCGTTTTCT------------------------- 245
* * * * ** * ** * * * ** *
consensus_10999#1 GTTTGCAAAAGACTGATTCAGACAAAGTTCCCT--TACTTAAATCTCAGGTCAACAAG-T 371
consensus_10999#2 GTTTGCAAAAGACTGATCCAGACAAAGTTCCCT--TACTTAAATCTCAGGTCAACAAG-T 390
consensus_10999#0 GTTTGCAAAAGACTGATCCAGACAAAGTTCCCT--TACTTAAATCTCAGGTCAACAAG-T 410
consensus_10999#3 -TCAAGGATGGATTAACTCAGGAAAAATATTGAGGCGCTTCGTCTTCAGAATTTTGGGAT 304
* * ** * * *** *** * *** **** * *
consensus_10999#1 ACATGAAGAATGTCCTTGATAACTTTGACCAATATGAGTTTTACATGGGTCCGTCATCTA 431
consensus_10999#2 ACATGAAGAATGTCCTTGATAACTTT---------------------------------- 416
consensus_10999#0 ACATGAAGAATGTCCTTGATAACTTTGACCAATATGAGTTTTACATGGGTCCGTCATCTA 470
consensus_10999#3 TCATGAACATCATCTT--GTAATT------------------------------------ 326
****** * ** * *** *
consensus_10999#1 ATTCTGATGCCATGATAG------------------------------------------ 449
consensus_10999#2 ------------------------------------------------------------
consensus_10999#0 ATCCTGATGCCATGATAGTTTTGATGAATTTCCGTGAGGACGGTATGACACCATACTTCG 530
consensus_10999#3 ------------------------------------------------------------
consensus_10999#1 ------------------------------------------------------------
consensus_10999#2 ------------------------------------------------------------
consensus_10999#0 TTTTCTTCAAGGATGGATTAACTCAGGAAAAATATTGAGGCGCTTCGTCTTCAGAATTTT 590
consensus_10999#3 ------------------------------------------------------------
consensus_10999#1 ---------------------------------------------
consensus_10999#2 ---------------------------------------------
consensus_10999#0 GGGATTCATGAACATCATCTTGTAATTTATAAATACANTGTGCTA 635
consensus_10999#3 ---------------------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||