Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 1101 cluster # 1101       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1101#0 length = 599 sequences # 2  

consensusID : consensus_1101#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 599
fasta sequence
                              [TTTCTTTTTAAATGGACAGTCCGACAACAATGCAACCATATGCAGATACACAAAGAGATTGGCATGATGGACTATTTGACTGTACAAATGACTGTAATTCATGTTGGCTTGTGCTTTGCTGTTATCCCTGTTACATGTGCTACATGTATCGTCGATATGATGAATGTTGCGCAACCCCATGTTTTATTATATGCCCTGGTTTCACGTTAAGAGCATACCATCGAGCTAAACATAATATACAAGGTACTTTGTGCAAAGACTATCTGAAGGAATACTTTTGTCCATTGTGTGCAGCCTGTCAATTAGATCGTGATATGAAGTATGTGGAAGCGACTAGTGGGATACTAAATGTTTGAAGCGAAACAGACAGTTACATTGTTCAGTTTATTTTCTCACATTTCTTTAATGTTTCGATAAACATTTATTCGTCTCTTTAAAGTCACAATATTTTTATTCTTTTATCGTAAAAGGGGTAGTTTTGCAAATTCTATGAACCATCCCATTATGTTTGAAACAGTTTTCATTCATTTCACTGGCTCTTTTTTGTTGAAAAACTCACAATGATGCATTTGTATGATAAATAATAAATACATATTTTT]

[+] EMBL CD082337             [TTTCTTTTTAAATGGACAGTCCGACAACAATGCAACCATATGCAGATACACAAAGAGATTGGCATGATGGACTATTTGACTGTACAAATGACTGTAATTCATGTTGGCTTGTGCTTTGCTGTTATCCCTGTTACATGTGCTACATGTATCGTCGATATGATGAATGTTGCGCAACCCCATGTTTTATTATATGCCCTGGTTTCACGTTAAGAGCATACCATCGAGCTAAACATAATATACAAGGTACTTTGTGCAAAGACTATCTGAAGGAATACTTTTGTCCATTGTGTGCAGCCTGTCAATTAGATCGTGATATGAAGTATGTGGAAGCGACTAGTGGGATACTAAATGTTTGAAGCGAAACAGACAGTTACATTGTTCAGTTTATTTTCTCACATTTCTTTAATGTTTCGATAAACATTTATTCGTCTCTTTAAAGTCACAATATTTTTATTCTTTTATCGTAAAAGGGGTAGTTTTGCAAATTCTATGAACCATCCCATTATGTTTGAAACAGTTTTCATTCATTTCACTGGCTCTTTTTTGTTGAAAAACTCACAATGATGCATTTGTATGATAAATAATAAATACATATTTT ]
[-] EMBL CD075936             [                           ctaaGCAACCATATGCAGTTAGACAAAGAGATTGGCATGATGGACTATTTGACTGTACAAATGACTGTAATTCATGTTGGCTTGTGCTTTGCTGTTATCCCTGTTACATGTGCTACATGTATCGTCGATATGATGAATGTTGCGCAACCCCATGTTTTATTATATGCCCTGGTTTCACGTTAAGAGCATACCATCGAGCTAAACATAATATACAAGGTACTTTGTGCAAAGACTATCTGAAGGAATACTTTTGTCCATTGTGTGCAGCCTGTCAATTAGATCGTGATATGAAGTATGTGGAAGCGACTAGTGGGATACTAAATGTTTGAAGCGAAACAGACAGTTACATTGTTCAGTTTATTTTCTCACATTTCTTTAATGTTTCGATAAACATTTATTCGTCTCTTTAAAGTCACAATATTTTTATTCTTTTATCGTAAAAGGGGTAGTTTTGCAAATTCTATGAACCATCCCATTATGTTTGAAACAGTTTTCATTCATTTCACTGGCTCTTTTTTGTTGAAAAACTCACAATGATGCATTTGTATGATAAATAATAAATACATATTTTT]


>consensus_1101#0 TTTCTTTTTAAATGGACAGTCCGACAACAATGCAACCATATGCAGATACACAAAGAGATT GGCATGATGGACTATTTGACTGTACAAATGACTGTAATTCATGTTGGCTTGTGCTTTGCT GTTATCCCTGTTACATGTGCTACATGTATCGTCGATATGATGAATGTTGCGCAACCCCAT GTTTTATTATATGCCCTGGTTTCACGTTAAGAGCATACCATCGAGCTAAACATAATATAC AAGGTACTTTGTGCAAAGACTATCTGAAGGAATACTTTTGTCCATTGTGTGCAGCCTGTC AATTAGATCGTGATATGAAGTATGTGGAAGCGACTAGTGGGATACTAAATGTTTGAAGCG AAACAGACAGTTACATTGTTCAGTTTATTTTCTCACATTTCTTTAATGTTTCGATAAACA TTTATTCGTCTCTTTAAAGTCACAATATTTTTATTCTTTTATCGTAAAAGGGGTAGTTTT GCAAATTCTATGAACCATCCCATTATGTTTGAAACAGTTTTCATTCATTTCACTGGCTCT TTTTTGTTGAAAAACTCACAATGATGCATTTGTATGATAAATAATAAATACATATTTTT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)