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Schistosoma mansoni
cluster # 11018 cluster # 11018       Sequences # 28       consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11018#0 length = 1768 sequences # 18  
consensus_11018#1 length = 747 sequences # 4  
 consensus_11018#2 length = 527 sequences # 3  
consensus_11018#3 length = 471 sequences # 3  
consensusID : consensus_11018#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 1768
fasta sequence 
                              [GGCCGGCAGGGAGAGCGTTGTGATTTTTGTTGCATAGTGATGTGGAGTCCTGTTGTTGTCACCGTTGGAGGGTTACCTTGTCCTAGTGATAGGGTAGCTTTGGTTCGAAAGTCGCTGCCTTACCCAGAACCCTCCACTATTCTGTCACACAGGAAGCGAGCTAGGTTGGATAATCTTACCGAGGAGGAGAAAATCATCCGGAGAAAAATACTTAACCGGGAGGCAGCTCAGAAAGCACGTGATCGCAGAAAAGATTTGATGGAGAGTATGGAGGAAAATCTAGCTTATCTCCGTTGGGAAAATGATTACCTGAAATCCTCAAACCGAATGCTCCGCCTTAAGTTTGTTGAACAAGAGCAAAAATTCCAAGCACTGCAAGAAAAACTAAGTGGTATTATCAGACATGTGGAGAAGTTTTCTGGAAGTCAGATTGAGCCACCAGAGTCAGCTGAACTCCTCCCTCTGCAGAAGGGAGTGGCTCTCTGTCTGTCCGTTCTACTCTTCCTCCACCTCTACAATGGCCTGGAGAATGCGTCCAAAACTCCAGTCTCGAGGATGTGCCTGAAGATATATCATCAACTTTGTTTGATGCTCAAACCGTCGAAGTCTCATCTCAAGATGTGTCTGAAACCAAACAGTCTGGAGACAGCAATTGCTCTGACGACCTGATTCCATATTCTCCATGCTTATACGATAGTATCTTAAACAGTCTACAAGATGACCACATAGAAGACATTCCTGGATTAACAGATGCTTACAATTCGGAAGAAAGCCTGGATGAACTCTTAGATGTTTTAAAGTGTGACGCGTGTGATGATTTATCCACAGGAATTCTCTCTTAACATTT-TTCAGACCCCGTGATC-TTGT-CACTTAAATCCTTGGCTATAGTGGCGTTGTACATATGACTTTATCAATTTACTTATTTATCTCATTGTC-TCACTCTAAATCTATCGTTTAATTTTGATACTTAGTGCTGGGATTTANCCGATAAAACAATGCGGTCTAAAGAAGTGGAGAGATGTCCGTCGCTNTATTATTCGCTAGTGCAATATTAGTCGCACGTACTTGGTAACGCATGCTTTGGTTATGTCCACAAATTGTACTGCCAGTTGTATCTAGGTTTCGTAATGCCTTACCAGGTGCGTCCAAGAAACTAATTACATACGAATTTTCAGAATGTCATGCTTGGGCGACTGTGATTCGATAACTAGGAGCCAGACAGTTATTCTCGGGAGGATAGTCTCCACTGAAAAGAGGACTGACATGTTGGTATTTATTACCAACTATTCTGGTATGTTGTCTTGCGAGCTAACTTGATGTTTACGAGACGTCCTGTATTGTAAGGATTTGGTGCCGAGTCTAGTTGGGATGTGTGAGATCCCAACTTGTGATGCGTGGTAAAACATTCGGTGACGTCACTGACATTTCATAATGTTGGCCTAGGGTGCTAGTAAAGTCGCGCGTTTAGTGGACTTATCCAGATTTGTTATGGGGAGTTAGGATGATAATATATTTAGGGTCCTGATTTAGTGTGTACGGGACGTTGGTTGTCTGTCCTGGCCACTGACCACGTTAGACCCCGTTGCCGGCTGTTTTCGAGCCTGATGGTTGCAGTCCGCTGGTCAACTACTTAATGGGCAAGATGGAGTGGGGTGCTGACTAAGCGTGTCATACTTGTTCTAGTCGTCAGTGAAAGTTGAAGTAAGACTGGCCGTTTCCAGTATTGAGGTTGGGCTCCGTCAATCCGCGTTCTCACAATCCAATTCCC]

[+] EMBL CD138889             [GGCCGGCAGGGAGAGCGTTGTGATTTTTGTTGCATAGTGATGTGGAGTCCTGTTGTTGTCACCGTTGGAGGGTTACCTTGTCCTAGTGATAGGGTAGCTTTGGTTCGAAAGTCGCTGCCTTACCCAGAACCCTCCACTATTCTGTCACACAGGAAGCGAGCTAGGTTGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD083005             [                                          TGGAGTCCTGTTGTTGTCACCGTTGGAGGGTTACCTTGTCCTAGTGATAGGGTAGCTTTGGTTCGAAAGTCGCTGCCTTACCCAGAACCCTCCACTATTCTGTCACACAGGAAGCGAGCTAGGTTGGATAATCTTACCGAGGAGGAGAAAATCATCCGGAGAAAAATACTTAACCGGGAGGCAGCTCAGAAAGCACGTGATCGCAGAAAAGATTTGATGGAGAGTATGGAGGAAAATCTAGCTTATCTCCGTTGGGAAAATGATTACCTGAAATCCTCAAACCGAATGCTCCGCCTTAAGTTTGTTGAACAAGAGCAAAAATTCCAAGCACTGCAAGAAAAACTAAGTGGTATTATCAGACATGTGGAGAAGTTTTCTGGAAGTCAGATTGAGCCACCAGAGTCAGCTGAACTCCTCCCTCTGCAGAAGGGAGTGGCTCTCTGTCTGTCCGTTCTACTCTTCCTCCACCTCTACAATGGCCTGGAGAATGCGTCCAAAACTCCAGTCTCGAGGATGTGCCTGAAGATATATCATCAACTNTGTTTGATGCTCANACCGTCGAAGTCTCATCTCAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD180890             [                                                                                                                                                                 TAGGTTGGATAATCTTACCGAGGAGGAGAAAATCATCCGGAGAAAAATACTTAACCGGGAGGCAGCTCAGAAAGCACGTGATCGCAGAAAAGATTTGATGGAGAGTATGGAGGAAAATCTAGCTTATCTCCGTTGGGAAAATGATTACCTGAAATCCTCAAACCGAATGCTCCGCCTTAAGTTTGTTGAACAAGAGCAAAAATTCCAAGCACTGCAAGAAAAACTAAGTGGTATTATCAGACATGTGGAGAAGTTTTCTGGAAGTCAGATTGAGCCACCAGAGTCAGCTGAACTCCTCCCTCTGCAGAAGGGAGTGGCTCTCTGTCTGTCCGTTCTACTCTTCCTCCACCACTACAATGGCCTGGAGAATGCGTCCAAAACTCCAGTCTCGAGGATGTGCCTGAAGATATATCATCAACTGTGTTTGATGCTCAAACCGTCGAAGTCTCATCTCAAGATGTGTCTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD060171             [                                                                                                                                                                                                                                                                                                                                                                   AGCAAAAATTCCAAGCACTGCAAGAAAAACTAAGTGGTATTATCAGACATGTGGAGAAGTTTTCTGGAAGTCAGATTGAGCCACCAGAGTCAGCTGAACTCCTCCCTCTGCAGAAGGGAGTGGCTCTCTGTCTGTCCGTTCTACTCTTCCTCCACCTCTACAATGGCCTGGAGAATGCGTCCAAAACTCCAGTCTCGAGGATGTGCCTGAAGATATATCATCAACTTTGTTTGATGCTCAAACCGTCGAAGTCTCATCTCAAGATGTGTCTGAAACCAAACAGTCTGGAGACAGCAATTGCTCTGACGACCTGATTCCATATTCTCCATGCTTATACGATAGTATCTTAAACAGTCTGCAAGATGACCACATAGAAGACATTCCTGGATTAACAGATGCTTACAATTCGGAAGAAAGCCTGGATGAACTCTTAGATGTTTTAAAGTGTGACGCGTGTGATGATTTATCCACAGGAATTCTCTCTTAACATTTCTTCAGACCCCGTGATCGTTCTACACTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD076781             [                                                                                                                                                                                                                                                                                                                                                                                                                 ACATGTGGAGAAGTTTTCTGGAAGTCAGATTGAGCCACCAGAGTCAGCTGAACTCCTCCCTCTGCAGAAGGGAGTGGCTCTCTGTCTGTCCGTTNTACTCTTCCTCCACCTCTACAATGGCCTGGAGAATGCGTCCAAAACTCCAGTCTCGAGGATGTGCCTGAAGATATATCATCAACTTTGTTTGATGCTCAAACCGTCGAAGTCTCATCTCAAGATGTGTCTGAAACCAAACAGTCTGGAGACAGCAATTGCTCTGACGACCTGATTCCATATTCTCCATGCTTATACGATAGTATCTTAAACAGTCTACAAGATGACCACATAGAAGACATTCCTGGATTACCAGATGCTTACAATTCGGAAGAAAGCCTGGATGAACTCTTAGATGTTTTAAAGTGTGACGCGTGTGATGATTTATCCACAGGAATTCTCTCTTAACATTT TTCAGACCCCGTGATC TTGT CACTTAAATCCTTGGCTATAGTGGCGTTGTACATATGACTTTATCAATTTACTTATTTATCTCATTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD076589             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                CTGAACTCCTCCCTCTGCAGAAGGGAGTGGCTCTCTGTCTGTCCGTTNTACTCTTCCTCCACCTCTACAATGGCCTGGAGAATGCGTCCAAAACTCCAGTCTCGAGGATGTGCCTGAAGATATATCATCAACTTTGTTTGATGCTCAAACCGTCGAAGTCTCATCTCAAGATGTGTCTGAAACCAAACAGTCTGGAGACAGCAATTGCTCTGACGACCTGATTCCATATTCTCCATGCTTATACGATAGTATCTTAAACAGTTTACAAGATGACCACATAGAAGACATTCCTGGATTAACAGATGCTTACAATTCGGAAGAAAGCCTGGATGAACTCTTAGATGTTTTAAAGTGTGACGCGTGTGATGATTTATCCACAGGAATTCTCTCTTAACATTT TTCAGACCCCGTGATC TTGT CACTTAAATCCTTGGCTATAGTGGCGTTGTACATATGACTTTATCAATTTACTTATTTATCTCATTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BG931304             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              gTCTCTGTCTGTCCGTTCTACTCTTCCTCCACCTCTACAATGGCCTGGAGAATGCGTCCAAAACTCCAGTCTCGAGGATGTGCCTGAAGATATATCATCAACTTTGTTTGACGCTCAAACCGTCGAAGTCTCATCTCAAGATGTGTCTGAAACCAAACAGTCTGGAGACAGCAATTGCTCTGACGACCTGATTCCATATTCTCCATGCTTATACGATAGAATCTTAAACAGTCTACAAGATGACCACATAGAAGACATTCCTGGATTAACAGATGCTTACAATTCGGAAGAGAGCCTGGATGAACTCTTACATGTATTATAGTGTGACGCGTGTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BG930710             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCAAACCGTCGAAGTCTCATCTCAAGATGTGTCTGAAACCAAACAGTCTGGAGACAGCAATTGCTCTGACGACCTGATTCCATATTCTCCATGCTTGTACGATAGTATCTTAAACAGTCTACAAGATGACCACATAGAAGACATTCCTGGATTAACAGATGCTTACAATTCGGAAGAAAGCCTGGATGAACTCCTAGATGTTTTAAAGTGTGACGCGTGTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD138712             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTGACGACCTGATTCCATATTCTCCATGCTTATACGATAGTATCTTAAACAGTCTACAAGATGACCACATAGAAGACATTCCTGGATTAACAGATGCTTACAATTCGGAAGAAAGCCTGGATGAACTCTTAGATGTTTTAAAGTGTGACGCGTGTGATGATTTATCCACAGGAATTCTCTCTTAACATTT TTCAGACCCCGTGATC TTGT CACTTAAATCCTTGGCTATAGTGGCGTTGTACATATGACTTTATCAATTTACTTATTTATCTCTCTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BG932424             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATTT TTCAGACCCCGTGATC TTGT CACTTAAATCCTTGGCTATAGTGGCGTTGTACACATGACTTTATCAATTTACTTATTTATCTCATTGTC T                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD115329             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CGTTGTACATATGAC TTATCAATTTACTTA TTATCTCA TGTCTTCACTCTAAATCTATCGTTTAATTTTGATACTTAGTGCTGGGATTTANCCGATAAAACAATGCGGTCTAAAGAAGTGGAGAGATGTCCGTCGCTNTATTATTCGCTAGTGCAATATTAGTCGCACGTACTTGGTAACGCATGCTTTGGTTATGTCCACAAATTGTACTGCCAGTTGTATCTAGGTTTCGTAATGCCTTACCAGGTGCGTCCAAGAAACTAATTACATACGAATTTTCAGAATGTCATGCTTGGGCGACTGTGATTCGATAACTAGGAGCCAGACAGTTATTCTCGGGAGGATAGTCTCCACTGAAAAGAGGACTGACATGTTGGTATTTATTACCAACTATTCTGGTATGTTGTCTTGCGAGCTAACTTGATGTTTACGAGACGTCCTGTATTGTAAGGATTTGGTGCCGAGTCTAGTTGGGATGTGTCAGATCCCAGCTTGTGATGAGTGG                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD115537             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                tctggcacgTTACATACGAATTTTCAGAATGTCATGCTTGGGCGACTGTGATTCGATAACTGGGAGCCAGACAGTTATTCTCGGGAGGATAGTCTCCACTGAAAAGAGGACTGACATGTTGGTTTTTATTACCAACTATTCTGGTATGTTGCCTTGCGAGCTAACTTGATGTTTACGAGACGTCCTGTATTGTAAGGATTTGGTGCCGAGTCTAGTTGGGATGTGTGAGATCCCAACTTGTGATGCGTGGTAAAACATTCGGTGACGTCACTGACATTTCATAATGTTGGCCTAGGGTGCTAGTAAAGTCGCGCGTTTAGTGGACTTATCCAGATTTGTTATGGGGAGTTAGGATGATAATATATTTAGGGTCCTGATTTACTGTGTACGGGACGTTGGTTGTCTGTCCTGGCCACTGACCACGTTAGACCCCGTTGCCGGCTGTTTTCGAGCCTGATGGTTGCAGTCCGCTGGTCAACTAC                                                                                                                                          ]
[-] EMBL CD115452             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGGGCGACTGTGATTCGATAAATAGGAGCCAGACAGTTATTCTCGGGAGGATAGTCTCCACTGAAAAGAGGACTGACATGTTGGTATTTATTACCAACTATTCTGGTATGTTGTCTTGCGAGCTAACTTGATGTTTACGAGACGTCCTGTATTGTAAGGATTTGGTGCCGAGTCTAGTTGGGATGTGTGAGATCCCAACTTGTGATGCGTGGTAAAACATTCGGTGACGTCACTGACATTTCATAATGTTGGCCTAGGGTGTTAGTAAAGTCGCGCGTTTAGTGGACTTATCCAGATTTGTTATGGGGAGTTAGGATGATAATATATTTAGGGTCCTGATTTAGTGTGTACGGGACGTTGGTAGTATGTCCTGGCCACGGACCACGTTAGACCCCGTTGCCGGCTGTTTTCGAGCCTGATGGTTGCAGTCCGCTGGTCAACTACTTAATGGGCAAGATGGAGTGGGG                                                                                                                   ]
[-] EMBL CD115486             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCCACTGAAAAGAGGACTGACATGTTGGTATTTATTACCAACTATTCTGGTATGTTGTCTTGCGAGCTAACTTGATGTTTACGAGACGTCCTGTATTGTAAGGATTTGGTGCCGAGTCTAGTTGGGATGTGTGAGATCCCAACTTGTGATGCGTGGTAAAACATTCGGTGACGTCACTGACATTTCATAATGTTGGCCTAGGGTGCTAGTAAAGTCGCGCGTTTAGTGGACTTATCCAGATTTGTTATGGGGAGTTAGGATGATAATATATTTAGCGTCCTGATTTAGTGTGTACGGGACGTTaaagta                                                                                                                                                                                                                         ]
[-] EMBL CD200423             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGGATTTGGTGCCGAGTCTAGTTGGGATGTGTGAGATCCCAACTTGTGATGCGTGGTAAAACATTCGGTGATGTCACTGACATTTCATAATGTTGGCCTAGGGTGCTAGTAAAGTCGCGCGTTTAGTGGACTTATCCAGATTTGTTATGGGGAGTTAGGATGATAATATATTTAGGGTCCTGATTTAGTGTGTACGGGACGTTGGTTGTCTGTCCTGGCCACTGACCACGTTAGACCCCGTTGCCGGCTGTTTTCGAGCCTGATGGTTGCAGTCCGCTGGTCAACTACTTAATGGGCAAGATGGAGTGGGGTGCTGACTAAGCGTGTCATACTTGTTCTAGTCGTCAGTGAAAGTTGAAGTAAGACTGGCCGTTTCCAGTATTGAGGT                                      ]
[+] EMBL CD091003             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CATAATGTTGGCCTAGGGTGCTAGTAAAGTCGCGCGTTTAGTGGACTTATCCAGATTTGTTATGGGGAGTTAGGATGATAATATATTTAGGGTCCTGATTCAGTGTGTACGGNACGTTGGTTGTCTGTCCTGGCCACTGACCACGTTAGACCCCGTTGCCGGCTGTTTTCGAGCCTGATGGTTGCAGTCCGCTGGTCAACTACTTAATGGGCAAGATGG                                                                                                                          ]
[+] EMBL CD093068             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCCCGTTGCCGGCTGTTTTCGAGCCTGATGGTTGCAGTCCGCTGGTCAACTACTTAATGGGCAAGATGGAGTGGGGTGCTGACTAAGCGTGTCATACTTGTTCTAGTCGTCAGTGAAAGTTGAAGTAAGACTGGCCGTTTCCAGTATTGAGGTTGGGCTCCGTCAATCCGCGTTCTCACAATCCAATTCCC]
[-] EMBL CD164040             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCCGTTGCCGGCTGTTTTCGAGCCTGATGGTTGCAGTCCGCTGGTCAACTACTTAATGGGCAAGATGGAGTGGGGTGCTGACTAAGCGTGTCATACTT                                                                                            ]




>consensus_11018#0
GGCCGGCAGGGAGAGCGTTGTGATTTTTGTTGCATAGTGATGTGGAGTCCTGTTGTTGTC
ACCGTTGGAGGGTTACCTTGTCCTAGTGATAGGGTAGCTTTGGTTCGAAAGTCGCTGCCT
TACCCAGAACCCTCCACTATTCTGTCACACAGGAAGCGAGCTAGGTTGGATAATCTTACC
GAGGAGGAGAAAATCATCCGGAGAAAAATACTTAACCGGGAGGCAGCTCAGAAAGCACGT
GATCGCAGAAAAGATTTGATGGAGAGTATGGAGGAAAATCTAGCTTATCTCCGTTGGGAA
AATGATTACCTGAAATCCTCAAACCGAATGCTCCGCCTTAAGTTTGTTGAACAAGAGCAA
AAATTCCAAGCACTGCAAGAAAAACTAAGTGGTATTATCAGACATGTGGAGAAGTTTTCT
GGAAGTCAGATTGAGCCACCAGAGTCAGCTGAACTCCTCCCTCTGCAGAAGGGAGTGGCT
CTCTGTCTGTCCGTTCTACTCTTCCTCCACCTCTACAATGGCCTGGAGAATGCGTCCAAA
ACTCCAGTCTCGAGGATGTGCCTGAAGATATATCATCAACTTTGTTTGATGCTCAAACCG
TCGAAGTCTCATCTCAAGATGTGTCTGAAACCAAACAGTCTGGAGACAGCAATTGCTCTG
ACGACCTGATTCCATATTCTCCATGCTTATACGATAGTATCTTAAACAGTCTACAAGATG
ACCACATAGAAGACATTCCTGGATTAACAGATGCTTACAATTCGGAAGAAAGCCTGGATG
AACTCTTAGATGTTTTAAAGTGTGACGCGTGTGATGATTTATCCACAGGAATTCTCTCTT
AACATTTTTCAGACCCCGTGATCTTGTCACTTAAATCCTTGGCTATAGTGGCGTTGTACA
TATGACTTTATCAATTTACTTATTTATCTCATTGTCTCACTCTAAATCTATCGTTTAATT
TTGATACTTAGTGCTGGGATTTANCCGATAAAACAATGCGGTCTAAAGAAGTGGAGAGAT
GTCCGTCGCTNTATTATTCGCTAGTGCAATATTAGTCGCACGTACTTGGTAACGCATGCT
TTGGTTATGTCCACAAATTGTACTGCCAGTTGTATCTAGGTTTCGTAATGCCTTACCAGG
TGCGTCCAAGAAACTAATTACATACGAATTTTCAGAATGTCATGCTTGGGCGACTGTGAT
TCGATAACTAGGAGCCAGACAGTTATTCTCGGGAGGATAGTCTCCACTGAAAAGAGGACT
GACATGTTGGTATTTATTACCAACTATTCTGGTATGTTGTCTTGCGAGCTAACTTGATGT
TTACGAGACGTCCTGTATTGTAAGGATTTGGTGCCGAGTCTAGTTGGGATGTGTGAGATC
CCAACTTGTGATGCGTGGTAAAACATTCGGTGACGTCACTGACATTTCATAATGTTGGCC
TAGGGTGCTAGTAAAGTCGCGCGTTTAGTGGACTTATCCAGATTTGTTATGGGGAGTTAG
GATGATAATATATTTAGGGTCCTGATTTAGTGTGTACGGGACGTTGGTTGTCTGTCCTGG
CCACTGACCACGTTAGACCCCGTTGCCGGCTGTTTTCGAGCCTGATGGTTGCAGTCCGCT
GGTCAACTACTTAATGGGCAAGATGGAGTGGGGTGCTGACTAAGCGTGTCATACTTGTTC
TAGTCGTCAGTGAAAGTTGAAGTAAGACTGGCCGTTTCCAGTATTGAGGTTGGGCTCCGT
CAATCCGCGTTCTCACAATCCAATTCCC

consensusID : consensus_11018#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 747
fasta sequence 
                              [GNAGCCAANATTCGGCACGAGGCCTTAACCGGGAGGCAGCTCAGAAAGCACGTGATCGCAGAAAAGATTTGATGGAGAGTATGGAGGAAAATCTAGCTTATCTCCGTTGGGAAAATGATTACCTGAAATCCTCAAACCGAATGCTCCGCCTTAAGTTTGTTGAACAAGAGCAAAAATTCCAAGCACTGCAAGAAAAACTAAGTGGTATTATCAGACATGTGGAGAAGTTTTCTGGAAGTCAGATTGAGCCACCAGAGTCAGCTGAACTCCTCCCTCTGCAGAAGGGAGTGGCTCTCTGTCTGTCCGTTCTACTCTTCCTCCACCTCTACAATGGCCTGGAGAATGCGTCCAAAACTCCAGTCTCGAGGATGTGCCTGAAGATATATCATCAACTTTGTTTGATGCTCAAACCGTCGAAGTCTCATCTCAAGATGTGTCTGAAACCAAACAGTCTGGAGACAGCAATTGCTCTGACGACCTGATTCCATATTCTCCATGCTTATACGATAGTATCTTAAACAGTCTACAAGATGACCACATAGAAGACATTCCTGGATTAACAGATGCTTACAATTCGGAAGAAAGCCTGGATGAACTCTTAGATGTTNTAAAGTGTGACGCGTGTGATGATTTATCCACAGGAATTCTCTCTTAACATTNTTCAGACCCCGTGATCTTGTCACTTAAATCCTTGGCTATAGTGGCNGTGTACATATGACTNTATCAATTTACTTATTTATCTCATGG]

[+] EMBL CD083207             [GNAGCCAANATTCGGCACGAGGCCTTAACCGGGAGGCAGCTCAGAAAGCACGTGATCGCAGAAAAGATTTGATGGAGAGTATGGAGGAAAATCTAGCTTATCTCCGTTGGGAAAATGATTACCTGAAATCCTCAAACCGAATGCTCCGCCTTAAGTTTGTTGAACAAGAGCAAAAATTCCAAGCACTGCAAGAAAAACTAAGTGGTATTATCAGACATGTGGAGAAGTTTTCTGGAAGTCAGATTGAGCCACCAGAGTCAGCTGAACTCCTCCCTCTGCAGAAGGGAGTGGCTCTCTGTCTGTCCGTTCTACTCTTCCTCCACCTCTACAATGGCCTGGAGAATGCGTCCAAAACTCCAGTCTCGAGGATGTGCCTGAAGATATATCATCAACTTTGTTTGATGCTCAAACCGTCGAAGTCTCATCTCAAGATGTGTCTGAAACCAAACAGTCTGGAGACAGCAATTGCTCTGACGACCTGATTCCATATTCTCCATGCTTATACGATAGTATCTTAAACAGTCTACAAGATGACCACATAGAAGACATTCCTGGATTAACAGATGCTTACAATTCGGAAGAAAGCCTGGATGAACTCTTAGATGTTNTAAAGTGTGACGCGTGTGATGATTTATCCACAGGAATTCTCTCTTAACATTNTTCAGACCCCGTGATCTTGTCACTTAAATCCTTGGCTATAGTGGCNGTGTACATATGACTNTATCAATTTACTTATTTATCTCATGG]
[+] EMBL CD170032             [                                               GCACGTGATCGCAGAAAAGATTTGATGGAGAGTATGGAGGAAAATCTAGCTTATCTCCGTTGGGAAAATGATTACCTGAAATCCTCAAACCGAATGCTCCGCCTTAAGTTTGTTGAACAAGAGCAAAAATTCCAAGCACTGCAAGAAAAACTAAGTGGTATTATCAGACATGTGGAGAAGTTTTCTGGAAGTCAGATTGAGCCACCAGAGTCAGCTGAACTCCTCCCTCTGCAGAAGGGAGTGGCTCTCTGTCTGTCCGTTCTACTCTTCCTCCACCTCTACAATGGCCTGGAGAATGCGTCCAAAACTCCAGT                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD137606             [                                                CACGTGATCGCAGAAAAGATTTGATGGAGAGTATGGAGGAAAATCTAGCTTATCTCCGTTGGGAAAATGATTACCTGAAATCCTCAAACCGAATGCTCCGCCTTAAGTTTGTTGAACAAGAGCAAAAATTCCAAGCACTGCAAGAAAAACTAAGTGGTATTATCAGACATGTGGAGAAGTTTTCTGGAAGTCAGATTGAGCCACCAGAGTCAGCTGAACTCCTCCCTCTGCAGAAGGGAGTGGCTCTCTGTCTGTCCGTTCTACTCTTCCTCCACCTCTACAATGGCCTGGAGAATGCGTCCAAAACTCCAGTCTCGAGGATGTGCCTGAAGATATATCATCAAC                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD142981             [                                                                                                                   TGATTACCTGAAATCCTCAAACCGAATGCTCCGCCTTAAGTTTGTCGAACAAGAGCAAAAATTCCAAGCACTGCAAGAAAAACTAAGTGGTATTATCAGACATGTGGAGAAGTTTTCTGGAAGTCAGATTGAGCCACCAGAGTCAGCTGAACTCCTCCCTCTGCAGAAGGGAGTGGCTCTCTGTCTGTCCGTTCTACTCTTCCTCCACCTCTACAATGGCCTGGAGAATGCGTCCAAAACTCCAGTCTCGAGGATGTGCCTGAAGATATATCATCAACTTTGTTTGATGCCCAAGCCGTCGAAGTCTCATCTCAAGATGTGTCTGAAA                                                                                                                                                                                                                                                                                                                ]




>consensus_11018#1
GNAGCCAANATTCGGCACGAGGCCTTAACCGGGAGGCAGCTCAGAAAGCACGTGATCGCA
GAAAAGATTTGATGGAGAGTATGGAGGAAAATCTAGCTTATCTCCGTTGGGAAAATGATT
ACCTGAAATCCTCAAACCGAATGCTCCGCCTTAAGTTTGTTGAACAAGAGCAAAAATTCC
AAGCACTGCAAGAAAAACTAAGTGGTATTATCAGACATGTGGAGAAGTTTTCTGGAAGTC
AGATTGAGCCACCAGAGTCAGCTGAACTCCTCCCTCTGCAGAAGGGAGTGGCTCTCTGTC
TGTCCGTTCTACTCTTCCTCCACCTCTACAATGGCCTGGAGAATGCGTCCAAAACTCCAG
TCTCGAGGATGTGCCTGAAGATATATCATCAACTTTGTTTGATGCTCAAACCGTCGAAGT
CTCATCTCAAGATGTGTCTGAAACCAAACAGTCTGGAGACAGCAATTGCTCTGACGACCT
GATTCCATATTCTCCATGCTTATACGATAGTATCTTAAACAGTCTACAAGATGACCACAT
AGAAGACATTCCTGGATTAACAGATGCTTACAATTCGGAAGAAAGCCTGGATGAACTCTT
AGATGTTNTAAAGTGTGACGCGTGTGATGATTTATCCACAGGAATTCTCTCTTAACATTN
TTCAGACCCCGTGATCTTGTCACTTAAATCCTTGGCTATAGTGGCNGTGTACATATGACT
NTATCAATTTACTTATTTATCTCATGG

consensusID : consensus_11018#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 527
fasta sequence 
                              [GTTACCTTGTCCTAGTGATAGGGTAGCTTTGGTTCGAAAGTCGCTGCCTTACCCAGAACCCTCCACTATTCTGTCACACAGGAAGCGAGCTAGGTTGGATAATCTTACCGAGGAGGAGAAAATCATCCGGAGAAAAATACTTAACCGGGAGGCAGCTCAGAAAGCACGTGATCGCAGAAAAGATTTGATGGAGAGTATGGAGGAAAATCTAGCTTATCTCCGTTGGGAAAATGATTACCTGAAATCCTCAAACCGAATGCTCCGCCTTAAGTTTGTTGAACAAGAGCAAAAA-TTCCAAGCACTGCAAGAAAAACTAAGTGGTATTATCAGACATGTGGAGAAGTTTTCTGGAAGTCAGATTGAGCCACCAGAGTCAGCAGAAGGGAGTGGCTCTCTGTCTGTCCGTTCTACTCTTCCTCCACCTCTACAATGGCCTGGAGAATGCGTCCAAAACTCCAGTCTCGAGGATGTGCCTGAAGATATATCATCAACTNTGTTTGATGCTCAAACCGTCGAAGTCTCATCTC]

[+] EMBL AI975079             [GTTACCTTGTCCTAGTGATAGGGTAGCTTTGGTTCGAAAGTCGCTGCCTTACCCAGAACCCTCCACTATTCTGTCACACAGGAAGCGAGCTAGGTTGGATAATCTTACCGAGGAGGAGAAAATCATCCGGAGAAAAATACTTAACCGGGAGGCAGCTCAGAAAGCACGTGATCGCAGAAAAGATTTGATGGAGAGTATGGAGGAAAATCTAGCTTATCTCCGTTGGGAAAATGATTACCTGAAATCCTCAAACCGAATGCTCCGCCTTAAGTTTGTTGAACAAGAGCAAAAA TTCCAAGCACTGCAAGAAAAACTAAGTGGTATTATCAGACATGTGGAGAAGTTTTCTGGAAGTCAGATTGAGCCACCAGAGTCAGCAGAAGGGAGTGGCTCTCTGTCTGTCCGTTCTACTCTTCCTCCACCTCTACAATGGCCTGGAGAATGCGTCCAAAACTCCAGTCTCGAGGATGTGCCTGAAGATATATCATCAACTNTGTTTGATGCTCAAACCGTCGAAGTCTCATCTC]
[+] EMBL AI976031             [GTTACCTTGTCCTAGTGATAGGGTAGCTTTGGTTCGAAAGTCGCTGCCTTACCCAGAACCCTCCACTATTCTGTCACACAGGAAGCGAGCTAGGTTGGATAATCTTACCGAGGAGGAGAAAATCATCCGGAGAAAAATACTTAACCGGGAGGCAGCTCAGAAAGCACGTGATCGCAGAAAAGATTTGATGGAGAGTATGGAGGAAAATCTAGCTTATCTCCGTTGGGAAAATGATTACCTGAAATCCTCAAACCGAATGCTCCGCCTTAAGTTTGTTGAACAAGAGCAAAAATTTCCAAGCACTGCAAGATAAACTAAGTGGTATTATCAGACATGTGGAGAAGTTTTCTGGAAGTCAGATTGAGCCACCAGAGTCAGCAGAAGGGAGTGGCTCTCTGTCTGTCCGTTCTACTCTTCCTCCACCTCTACAATGGCCTGGAGAATGCGTCCAAAACTCCAGTCTCGACGATGTGCCTGAAGATATATCATCAACTGTGTT                             ]
[+] EMBL CD138854             [                                                                                                                         ATCATCCGGAGAAAAATACTTAACCGGGAGGCAGCTCAAAAAGCACGTGATCGCAGAAAAGATTTGATGGAGAGTATGGAGGAAAATCTAGCTTATCTCCGTTGGGAAAATGATTACCTGAAATCCTC                                                                                                                                                                                                                                                                                       ]




>consensus_11018#2
GTTACCTTGTCCTAGTGATAGGGTAGCTTTGGTTCGAAAGTCGCTGCCTTACCCAGAACC
CTCCACTATTCTGTCACACAGGAAGCGAGCTAGGTTGGATAATCTTACCGAGGAGGAGAA
AATCATCCGGAGAAAAATACTTAACCGGGAGGCAGCTCAGAAAGCACGTGATCGCAGAAA
AGATTTGATGGAGAGTATGGAGGAAAATCTAGCTTATCTCCGTTGGGAAAATGATTACCT
GAAATCCTCAAACCGAATGCTCCGCCTTAAGTTTGTTGAACAAGAGCAAAAATTCCAAGC
ACTGCAAGAAAAACTAAGTGGTATTATCAGACATGTGGAGAAGTTTTCTGGAAGTCAGAT
TGAGCCACCAGAGTCAGCAGAAGGGAGTGGCTCTCTGTCTGTCCGTTCTACTCTTCCTCC
ACCTCTACAATGGCCTGGAGAATGCGTCCAAAACTCCAGTCTCGAGGATGTGCCTGAAGA
TATATCATCAACTNTGTTTGATGCTCAAACCGTCGAAGTCTCATCTC

consensusID : consensus_11018#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 471
fasta sequence 
                              [GTCGCGGGAATTCATTATAAAATCCACGTTGGCTATAGTGGCGTTGTACATATGACTTTATCAATTTACTTATTTATCTCATTGTCTTCACTCTAAATCTATCGTTTTAATTTTGATAACTTAGTGCTTGGGATTTACCCGATAAAACAATGCGGTCCTAAGAAGTGGAGAGATGTCCGTCGCTTTATTATTCGCTAGTGCAATATTAGTCGCACGTACTTGGTAACGCATGCTTTGGTTTTGTCCACAAATTGTACTGCCTGTTGTATCTAGGTTTCGTAATGCCTTACCAGGTGCGTCCAAGAAACTAATTACATACGAATTTTCAGAATGTCATGCTTGGGCGACTGTGATTCGATAACTANGAGCCAGACAGTTATTCTCGGGAGGATAGTCTCCACTGAAAAGAGGACTGACATGTTGGTATTTATTACCAACTATTCTGGTATGTTGTCTTGCGAGCTAACTTGA]

[+] EMBL CD115445             [GTCGCGGGAATTCATTATAAAATCCACGTTGGCTATAGTGGCGTTGTACATATGACTTTATCAATTTACTTATTTATCTCATTGTCTTCACTCTAAATCTATCGTTTTAATTTTGATAACTTAGTGCTTGGGATTTACCCGATAAAACAATGCGGTCCTAAGAAGTGGAGAGATGTCCGTCGCTTTATTATTCGCTAGTGCAATATTAGTCGCACGTACTTGGTAACGCATGCTTTGGTTTTGTCCACAAATTGTACTGCCTGTTGTATCTAGGTTTCGTAATGCCTTACCAGGTGCGTCCAAGAAACTAATTACATACGAATTTTCAGAATGTCATGCTTGGGCGACTGTGATTCGATAACTANGAGCCAGACAGTTATTCTCGGGAGGATAGTCTCCACTGAAAAGAGGACTGACATGTTGGTATTTATTACCAACTATTCTGGTATGTTGTCTTGCGAGCTAACTTGA]
[+] EMBL CD164961             [                                                                                              AAATCTATCGTTTTAATTTTGATAACTTAGTGCTTGGGATTTACCCGATAAAACAATGCGGTCCTAAGAAGTGGAGAGATGTCCGTCGCTTTATTATTCGCTAGTGCAATATTAGTCGCACGTACTTGGTAACGCATGCTTTGGTTTTGTCCACAAATTGTACTGCCAGTTGTATCTAGGTTTCGTAATGCCTTACCAGGTGCGTCCAAGAAACTAATTACATACGAATTTTCAGAATGTCATGCTTGGGCGACTGTGATTCGATAACTAGGAGCCAGACAGTTATTCTCGGGAGGATAGTCTCCACTGAAAAGAGGACTGACATGTTGGTATTTATTACCNACTATTCTGGTATGTTGTCTTGCGAGCTAACTTGA]
[+] EMBL CD115323             [                                                                                                                                                                                                                                                                                                                                  TTTTCAGAATGTCATGCTTGGGCGACTGTGATTCGATAACTAAGAGCCAGACAGTTATTCTCGGGAGGATAGACTCCACTGAAAAGAGGACTGACATGTTGGTATTTATTACCAACTATTCTGGCTTGTTGCCCTGCGAGC        ]




>consensus_11018#3
GTCGCGGGAATTCATTATAAAATCCACGTTGGCTATAGTGGCGTTGTACATATGACTTTA
TCAATTTACTTATTTATCTCATTGTCTTCACTCTAAATCTATCGTTTTAATTTTGATAAC
TTAGTGCTTGGGATTTACCCGATAAAACAATGCGGTCCTAAGAAGTGGAGAGATGTCCGT
CGCTTTATTATTCGCTAGTGCAATATTAGTCGCACGTACTTGGTAACGCATGCTTTGGTT
TTGTCCACAAATTGTACTGCCTGTTGTATCTAGGTTTCGTAATGCCTTACCAGGTGCGTC
CAAGAAACTAATTACATACGAATTTTCAGAATGTCATGCTTGGGCGACTGTGATTCGATA
ACTANGAGCCAGACAGTTATTCTCGGGAGGATAGTCTCCACTGAAAAGAGGACTGACATG
TTGGTATTTATTACCAACTATTCTGGTATGTTGTCTTGCGAGCTAACTTGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11018#1      ------------------------------------------------------------
consensus_11018#2      ------------------------------------------------------------
consensus_11018#0      GGCCGGCAGGGAGAGCGTTGTGATTTTTGTTGCATAGTGATGTGGAGTCCTGTTGTTGTC 60
consensus_11018#3      ------------------------------------------------------------
                                                                                   

consensus_11018#1      ------------------------------------------------------------
consensus_11018#2      -----------GTTACCTTGTCCTAGTGATAGGGTAGCTTTGGTTCGAAAGTCGCTGCCT 49
consensus_11018#0      ACCGTTGGAGGGTTACCTTGTCCTAGTGATAGGGTAGCTTTGGTTCGAAAGTCGCTGCCT 120
consensus_11018#3      ------------------------------------------------------------
                                                                                   

consensus_11018#1      ------------------------------------------------------------
consensus_11018#2      TACCCAGAACCCTCCACTATTCTGTCACACAGGAAGCGAGCTAGGTTGGATAATCTTACC 109
consensus_11018#0      TACCCAGAACCCTCCACTATTCTGTCACACAGGAAGCGAGCTAGGTTGGATAATCTTACC 180
consensus_11018#3      ------------------------------------------------------------
                                                                                   

consensus_11018#1      -----GNAGCCAAN-ATTCGGCACGAGGC-CTTAACCGGGAGGCAGCTCAGAAAGCACGT 53
consensus_11018#2      GAGGAGGAGAAAATCATCCGGAGAAAAATACTTAACCGGGAGGCAGCTCAGAAAGCACGT 169
consensus_11018#0      GAGGAGGAGAAAATCATCCGGAGAAAAATACTTAACCGGGAGGCAGCTCAGAAAGCACGT 240
consensus_11018#3      -----------------------------------------------------GTCGCGG 7
                                                                              * ** 

consensus_11018#1      GATCGCAGAAAAGATTTGATGGAGAGTATGGAGGAAAATCTAGCTTATCTCCGTTGGGAA 113
consensus_11018#2      GATCGCAGAAAAGATTTGATGGAGAGTATGGAGGAAAATCTAGCTTATCTCCGTTGGGAA 229
consensus_11018#0      GATCGCAGAAAAGATTTGATGGAGAGTATGGAGGAAAATCTAGCTTATCTCCGTTGGGAA 300
consensus_11018#3      GAATTCATTATAAAATCCACGTTGGCTATAGTGGCGTTGTACATATGACTTTATCAATTT 67
                       **   **  * * * *  * *  *  *** * **           *  **   *      

consensus_11018#1      AATGATT-ACCTGAA-ATCCTCAAACCGAATGCTCCGCCTTAAGTTTGTTGAACAAGAGC 171
consensus_11018#2      AATGATT-ACCTGAA-ATCCTCAAACCGAATGCTCCGCCTTAAGTTTGTTGAACAAGAGC 287
consensus_11018#0      AATGATT-ACCTGAA-ATCCTCAAACCGAATGCTCCGCCTTAAGTTTGTTGAACAAGAGC 358
consensus_11018#3      ACTTATTTATCTCATTGTCTTCACTCTAAATCTATCGTTTTAATTTTGATAACTTAGTGC 127
                       * * *** * ** *   ** ***  *  ***    **  **** **** * *   ** **

consensus_11018#1      AAAAATTCCAAGCACTGCAAGAAAAACTAAGTGGTATTATCAGACATGTGGAGAAGTTTT 231
consensus_11018#2      AAAAATTCCAAGCACTGCAAGAAAAACTAAGTGGTATTATCAGACATGTGGAGAAGTTTT 347
consensus_11018#0      AAAAATTCCAAGCACTGCAAGAAAAACTAAGTGGTATTATCAGACATGTGGAGAAGTTTT 418
consensus_11018#3      TTGGGATTTACCCGAT------AAAACAATGCGGTCCTA--AGAAGTGGAGAGATGTCCG 179
                             *  *  *  *      ***** * * ***  **  ***  **  **** **   

consensus_11018#1      CTG----GAAGTCAGATTGAGCCACCAGAGTCAGCTGAACTCCTCCCTCTGCAGAAGGGA 287
consensus_11018#2      CTG----GAAGTCAGATTGAGCCACCAGAGTCAGC-----------------AGAAGGGA 386
consensus_11018#0      CTG----GAAGTCAGATTGAGCCACCAGAGTCAGCTGAACTCCTCCCTCTGCAGAAGGGA 474
consensus_11018#3      TCGCTTTATTATTCGCTAGTGCAATATTAGTCGCACGTACTTGGTAACGCATGCTTTGGT 239
                         *        *  * * * ** *    ****                         ** 

consensus_11018#1      GTGGCTCTCTGTCTGTCCGTTCTACTCTTCCTCCACCTCTACAATGGCCTGGAGAATGCG 347
consensus_11018#2      GTGGCTCTCTGTCTGTCCGTTCTACTCTTCCTCCACCTCTACAATGGCCTGGAGAATGCG 446
consensus_11018#0      GTGGCTCTCTGTCTGTCCGTTCTACTCTTCCTCCACCTCTACAATGGCCTGGAGAATGCG 534
consensus_11018#3      TTTGTCCACAAATTGTACTGCCTGTTGTATCTAGGTTTC-GTAATGCCTTACCAGGTGCG 298
                        * *  * *    *** *   **  * *  **     **   **** * *      ****

consensus_11018#1      TCCAAAACTCCAGTCTCG-AGGATGTGCCTGAAG---ATATATCATCAACTTTG-TTTGA 402
consensus_11018#2      TCCAAAACTCCAGTCTCG-AGGATGTGCCTGAAG---ATATATCATCAACTNTG-TTTGA 501
consensus_11018#0      TCCAAAACTCCAGTCTCG-AGGATGTGCCTGAAG---ATATATCATCAACTTTG-TTTGA 589
consensus_11018#3      TCCAAGAAACTAATTACATACGAATTTTCAGAATGTCATGCTTGGGCGACTGTGATTCGA 358
                       ***** *  * * *  *  * **  *  * ***    **   *   * *** ** ** **

consensus_11018#1      TGCTCAAACCGTCGAAGTCTCATCTCAAGATGTGTCTGAAACCAAACAGTCTGGAGACAG 462
consensus_11018#2      TGCTCAAACCGTCGAAGTCTCATCTC---------------------------------- 527
consensus_11018#0      TGCTCAAACCGTCGAAGTCTCATCTCAAGATGTGTCTGAAACCAAACAGTCTGGAGACAG 649
consensus_11018#3      TAACTANGAGCCAGACAGTTATTCTCGGGAGGATAGTCTCCACTGAAAAGAGGACTGACA 418
                       *    *       **    *  ****                                  

consensus_11018#1      CAATTGCTCTGACGACCTGATTCCATATTCTCCATGCTTATACGATAGTATCTTAAACAG 522
consensus_11018#2      ------------------------------------------------------------
consensus_11018#0      CAATTGCTCTGACGACCTGATTCCATATTCTCCATGCTTATACGATAGTATCTTAAACAG 709
consensus_11018#3      TGTTGGTATTTATTACCAACTATTCTGGTATGTTGTCTTGCGAGCTAACTTGA------- 471
                                                                                   

consensus_11018#1      TCTACAAGATGACCACATAGAAGACATTCCTGGATTAACAGATGCTTACAATTCGGAAGA 582
consensus_11018#2      ------------------------------------------------------------
consensus_11018#0      TCTACAAGATGACCACATAGAAGACATTCCTGGATTAACAGATGCTTACAATTCGGAAGA 769
consensus_11018#3      ------------------------------------------------------------
                                                                                   

consensus_11018#1      AAGCCTGGATGAACTCTTAGATGTTNTAAAGTGTGACGCGTGTGATGATTTATCCACAGG 642
consensus_11018#2      ------------------------------------------------------------
consensus_11018#0      AAGCCTGGATGAACTCTTAGATGTTTTAAAGTGTGACGCGTGTGATGATTTATCCACAGG 829
consensus_11018#3      ------------------------------------------------------------
                                                                                   

consensus_11018#1      AATTCTCTCTTAACATTNTTCAGACCCCGTGATCTTGTCACTTAAATCCTTGGCTATAGT 702
consensus_11018#2      ------------------------------------------------------------
consensus_11018#0      AATTCTCTCTTAACATTTTTCAGACCCCGTGATCTTGTCACTTAAATCCTTGGCTATAGT 889
consensus_11018#3      ------------------------------------------------------------
                                                                                   

consensus_11018#1      GGCNGTGTACATATGACTNTATCAATTTACTTATTTATCTCATGG--------------- 747
consensus_11018#2      ------------------------------------------------------------
consensus_11018#0      GGCGTTGTACATATGACTTTATCAATTTACTTATTTATCTCATTGTCTCACTCTAAATCT 949
consensus_11018#3      ------------------------------------------------------------
                                                                                   

consensus_11018#1      ------------------------------------------------------------
consensus_11018#2      ------------------------------------------------------------
consensus_11018#0      ATCGTTTAATTTTGATACTTAGTGCTGGGATTTANCCGATAAAACAATGCGGTCTAAAGA 1009
consensus_11018#3      ------------------------------------------------------------
                                                                                   

consensus_11018#1      ------------------------------------------------------------
consensus_11018#2      ------------------------------------------------------------
consensus_11018#0      AGTGGAGAGATGTCCGTCGCTNTATTATTCGCTAGTGCAATATTAGTCGCACGTACTTGG 1069
consensus_11018#3      ------------------------------------------------------------
                                                                                   

consensus_11018#1      ------------------------------------------------------------
consensus_11018#2      ------------------------------------------------------------
consensus_11018#0      TAACGCATGCTTTGGTTATGTCCACAAATTGTACTGCCAGTTGTATCTAGGTTTCGTAAT 1129
consensus_11018#3      ------------------------------------------------------------
                                                                                   

consensus_11018#1      ------------------------------------------------------------
consensus_11018#2      ------------------------------------------------------------
consensus_11018#0      GCCTTACCAGGTGCGTCCAAGAAACTAATTACATACGAATTTTCAGAATGTCATGCTTGG 1189
consensus_11018#3      ------------------------------------------------------------
                                                                                   

consensus_11018#1      ------------------------------------------------------------
consensus_11018#2      ------------------------------------------------------------
consensus_11018#0      GCGACTGTGATTCGATAACTAGGAGCCAGACAGTTATTCTCGGGAGGATAGTCTCCACTG 1249
consensus_11018#3      ------------------------------------------------------------
                                                                                   

consensus_11018#1      ------------------------------------------------------------
consensus_11018#2      ------------------------------------------------------------
consensus_11018#0      AAAAGAGGACTGACATGTTGGTATTTATTACCAACTATTCTGGTATGTTGTCTTGCGAGC 1309
consensus_11018#3      ------------------------------------------------------------
                                                                                   

consensus_11018#1      ------------------------------------------------------------
consensus_11018#2      ------------------------------------------------------------
consensus_11018#0      TAACTTGATGTTTACGAGACGTCCTGTATTGTAAGGATTTGGTGCCGAGTCTAGTTGGGA 1369
consensus_11018#3      ------------------------------------------------------------
                                                                                   

consensus_11018#1      ------------------------------------------------------------
consensus_11018#2      ------------------------------------------------------------
consensus_11018#0      TGTGTGAGATCCCAACTTGTGATGCGTGGTAAAACATTCGGTGACGTCACTGACATTTCA 1429
consensus_11018#3      ------------------------------------------------------------
                                                                                   

consensus_11018#1      ------------------------------------------------------------
consensus_11018#2      ------------------------------------------------------------
consensus_11018#0      TAATGTTGGCCTAGGGTGCTAGTAAAGTCGCGCGTTTAGTGGACTTATCCAGATTTGTTA 1489
consensus_11018#3      ------------------------------------------------------------
                                                                                   

consensus_11018#1      ------------------------------------------------------------
consensus_11018#2      ------------------------------------------------------------
consensus_11018#0      TGGGGAGTTAGGATGATAATATATTTAGGGTCCTGATTTAGTGTGTACGGGACGTTGGTT 1549
consensus_11018#3      ------------------------------------------------------------
                                                                                   

consensus_11018#1      ------------------------------------------------------------
consensus_11018#2      ------------------------------------------------------------
consensus_11018#0      GTCTGTCCTGGCCACTGACCACGTTAGACCCCGTTGCCGGCTGTTTTCGAGCCTGATGGT 1609
consensus_11018#3      ------------------------------------------------------------
                                                                                   

consensus_11018#1      ------------------------------------------------------------
consensus_11018#2      ------------------------------------------------------------
consensus_11018#0      TGCAGTCCGCTGGTCAACTACTTAATGGGCAAGATGGAGTGGGGTGCTGACTAAGCGTGT 1669
consensus_11018#3      ------------------------------------------------------------
                                                                                   

consensus_11018#1      ------------------------------------------------------------
consensus_11018#2      ------------------------------------------------------------
consensus_11018#0      CATACTTGTTCTAGTCGTCAGTGAAAGTTGAAGTAAGACTGGCCGTTTCCAGTATTGAGG 1729
consensus_11018#3      ------------------------------------------------------------
                                                                                   

consensus_11018#1      ---------------------------------------
consensus_11018#2      ---------------------------------------
consensus_11018#0      TTGGGCTCCGTCAATCCGCGTTCTCACAATCCAATTCCC 1768
consensus_11018#3      ---------------------------------------


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)