These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11025#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1083 fasta sequence [TTACATACATATTGAAGCAAAACAGTAATAAAAGACTTACGTTTCTTCATTTTTTAATGAACCACGTGTAGGTGAATGCTTTGTATTGTTTGTATTTATTTTATATTGTTCATTACTCAGTGAAGCTTGAATAAGTGGTTTTCTAAGACTTAATGCAGGTAATCGAAATGGTAATAAGTGTGTATTGATTAATTCATCATTTGATTCGATTATTTCCTCTTCTTGTTTTTCAAAAACATGTTCATTATCATACGAATGAAGAATACTTCGTTTTGTCAATAAATTATTTCCTGGTATACTCAGCGTTGTTGATGATTTATTTGGAACTGAATGAGAAGTGGTTGGTATAAGTTTATTGACTGATAATGTTCCAGTTGTAGGTGCAATCGGGTTCTTATTTACAGTGACTGTGTCTGTTATGAAATCGGTATTTTTGCTCGAGACATCTTGACATCCTTTTAAGAATTCACTATTATCATGGTGAGTTTGACTTTTGTTTAAACTCTGGAACATTTCATCATTCTTTGAAATATTCTTCTGCTCTGAATACGTCGACAATCGTCCATTTTTACACGCAAATCTTGGAAGTCCTTTGACAGGATTCTGGGGTACTTGCAATTCCTCTAATTGTTGCATCAAACGTGCATTCTTCTTCCTTTCGTTTTCAAGATCTTCCCGCAAAATCGATATTTCCTGTTTTAGGGAGTTCTCTTCTTTGGTTTTATTTTGTGGTAAATAATCATCAGAATAGCCAGCAGAACACGTACACATTACCAGACGATATTGCAAGTCTTTATTAATTCTTTTCAAGGACTCAATCTCTTGATGCAAACCTTTCAACATGGACTCATGCTGCTTTTGTAGGAAAGTTATGCTGTTGTCTAGTAGGACTTTACGACTGTCGTCATCTAGTTTAGGAGGGCTGATAACAGGTGCTTCTCTTTTACTGGAAGGGAACATAATAGTCTCAACTTTCTTATCTCCAAGTGCATCAGTTTTGGTAGGAAAATTATTAAGAACAATCATAGTCAAGAATTCAGTCTACGGAAACGAAAGTGCGATTAAGTATTTCATATGCATTGT] [+] EMBL CD128372 [TTACATACATATAGAAGC AAACAGTAATAAAAGACTTACGTTTCTTCATTTTTTAATGAACCACGTGTAGGTGAATGCTTTGTATTGTTTGTATTTATTTTATATTGTTCATTACTCAGTGAAGCTTGAATAAGTGGTTTTCTAAGACTTAATGCAGGTAATCGAAATGGTAATAAGTGTGTATTGATTAATTCATCATTTGATTCGATTATTTCCTCTTCTTGTTTTTCAAAAACATGTTCATTATCATACGAATGAAGAATACTTCGTTTTGTCAATAAATTATTTCCTGGTATACTCAGCGTTGTTGATGATTTATTTGGAACTGAATGAGAAGTGGTTGGTATAAGTTT ] [+] EMBL CD128199 [ ATATTGAAGCAAAACAGTAATAAAAGACTTACGTTTCTTCATTTTTTAATGAACCACGTGTAGGTGAATGC TTGTATTGTTTGTATTTATTTTATATTGTTCATTACTCAGTGAAGCTTGAATAAGTGGTTTTCTAAGACTTAATGCAGGTAATCGAAATGGTAATAAGTGTGTATTGATTAATTCATCATTTGATTCGATTATTTCCTCTTCTTGTTTTTCAAAAACATGTTCATTATCATACGAATGAAGAATACTTCGTTTTGTCAATAAATTATTTCCTGGTATACTCAGCGTTGTTGATGATTTATTTGGAACTGAATGAGAAGTGGTTGGTATA ] [-] EMBL CD128307 [ TGAAGCAAAACAGTAATAAAAGACTTACGTTTCTTCATTTTTTAATGAACCACGTGTAGGTGAATGCTTTGTATTGTTTGTATTTATTTTATATTGTTCATTACTCAGTGAAGCTTGAATAAGTGGTTTTCTAAGACTTAATGCAGGTAATCGAAATGGTAATAAGTGTGTATTGACTAATTCATCATTTGATTCGATTATTTCCTCTTCTTGTTTTTCAAAAACATGTTCATTATCATACGAATGAAGAATACTTCGTTTTGTCAATAAATTATTTCCTGGTATACTCAGCGTTGTTGATGATTTATTTGGAACTGAATGAGAAGTGGTTGGTATAAGTTTATTGACTGATAAag ] [-] EMBL CD197594 [ TTTCTTCATTTTTAAATGAACCACGTGTAGGTGAATGCTTTGTATTGTTTGTATTTATTTTATATTGTTCATTACTCAGTGAAGCTTGAATAAGTGGTTTTCTAAGACTTAATGCAGGTAATCGAAATGGTAATAAGTGTGTATTGATTAATTCATCATTTGATTCGATTATTTCCTCTTCTTGTTTTTCAAAAACATGTTCATTATCATACGAATGAAGAATACTTCGTTTTGTCAATAAATTATTTCCTGGTATACTCAGCGTTGTTGATGATTTATTTGGAACTGAATGAGAAGTGGTTGGTATAAGTTTATTGACTGATAATGTTCCAGTTGTAGGTGCAATCGGGTTCTTATTTACAGTGACTGTGTCTGTTATGAAATCGGTATTTTTGCTCGAGACATCTTGACACCCTTTTAAGAATTCACTATTATCATGGTGAGTTTGACTTTTGTTTAAACTCTGGAA ] [+] EMBL CD069360 [ CATTACTCAGTGAAGCTTGAATAAGTGGTTTTCTAAGACTTAATGCAGGTAATCGAAATGGTAATAAGTGTGTCTTGATTAATTCATCATTTGATTCGATTATTTCCTCTTCTTGTATTTCAAAAACATGTTCATTATCATACGAATGAAGAATACTTCGTTTTGTCACTAAATTATTTCCTGGT ] [-] EMBL CD144857 [ CTCAGTGAAGCTGGAATAAGTGGTTTTCTAAGACTTAATGCAGGTAATCGAAATGGTAATAAGTGTGTATTGATTAATTCATCATTTGATTCGATTATTTCCTCTTCTGGTTTTTCAAAAACATGTTCATTATCATACGAATGAAGAATACTTCGTTTTGTCAATAAATTATTTCCTGGTATACTCAGCGTTGTTGATGATTTATTTGGAACTGAATGAGAAGTGGTTGGTATAAGTTTATTGACTGATAATGTTCCAGTTGTAGGTGCAATCGGGTTCTTATTTACAGTGACTGTGTCTGTTATGAAATCGGTATTTTTGCTCGAGACAT ] [-] EMBL CD156763 [ AGACTTAATGCAGGTAATCGAAATGGTAATAAGTGTGTATTGATTAATTCATCATTTGATTCGATTATTTCCTCTTCTTGTTTTTCAAAAACATGTTCATTATCATACGAATGAAGAATACTTCGTTTTGTCAATAAATTATTTCCTGGTATACTCAGCGTTGTTGATGATTTATTTGGAACTGAATGAGAAGTGGTTGGTATAAGTTTGTTGACTGATAATGTTCCAGTTGTAGGTGCAATCGGGTTCTTATTTACAGTGACTGTGTCTGTTATGAAATCGGTATTTTTGCTCGAGACATCTTGACATCCTTTTAAGAATTCACTATTATCATGGTGAGTTTGACTTTTGTTTAAACTCTGGAACATTTCATCATTCTTTGAAATATTCTTCTGCTCTGAATACGTCGACAATCGTCCATTTTTACACGCAAATCTTGGAAGTCCTTTGACAGGATTCTGGGGTACTTGCAATTCCTCTAATTGTTGCATCAAACGTGCATTCT ] [+] EMBL CD133145 [ ttgTCCTGGTATACTCAGCGTTGTTGATGATTTATTTGGAACTGAATGAGAAGTGGTTGGTATAAGTTTATTGACTGATAATGTTCCAGTTGTAGGTGCAATCGGGTTCTTATTTACAGTGACTGTGTCTGTTATGAAATCGGTATTTTTGCTCGAGACATCTTGACATCCTTTTAAGAATTCACTATTATCATGGTGAGTTTGACTTTTGTTTACACTCTGGAACATTTCATCATTCTTTGAAATATTCTTCTGCTCTGAATACGTCGACAATCGTCCATTTTTACACGCAAATCTTGGAAGTCCTTTGACAGGATTCTGGGGTACTTGCAATTCCTCTAATCGTTGCATCAAACGTGCATTCTTCTTCCTTTCGTTTTCAAGATCTTCCCGCAAAATCGATATTTCCTGTTTTAAGGAGTTCTCTTCTTTGGTTTCATTTCGGGGGAAATAATCATCAAAATAGCCAGCAGAACACGTACCCATTACCAGACGATATTGCAAGTCTTTATTAATTCTTTTCAAGGACTCAATCT ] [-] EMBL CD180120 [ TTGACATCCTTTTAAGAATTCACTATTATCATGGTGAGTTTGACTTTTGTTTAAACTCTGGAACATTTCATCATTCTTTGAAATATTCTTCTGCTCTGAATACGTCGACAATCGTCCATTTTTACACGCAAATCTTGGAAGTCCTTTGACAGGATTCTGGGGTACTTGCAATTCCTCTAATTGTTGCATCAAACGTGCATTCTTCTTCCTTTCGTTTTCAAGATCTTCCCGCAAAATCGA ] [-] EMBL CD192218 [ TTTAAGAATTCACTATTATCATGGTGAGTTTGACTTTTGTTTAAACTCTGGAACATTTCATCATTCTTTGAAATATTCTTCTGCTCTGAATACGTCGACAATCGTCCATTTTTACACGCAAATCTTGGAAGTCCTTTGACAGG ] [-] EMBL CD131511 [ CTTGGAAGTCCTTTGACTGGATTCTGGGGTACTTGCAATTCCTCTAATTGTTGCATCAAACGTGCATTCTTCTTCCTTTCGTTTTCAAGATCTTCCCGCAAAATCGATATTTCCTGTTTTAGGGAGTTCTCTTCTTTGGTTTTATTTTGTGGTAAATAATCATC ] [+] EMBL CD148016 [ TCCTTTGACAGGATTCTGGGGTACTTGCAATTCCTCTAATTGTTGCATCAAACGTGCATTCTTCTTCCTTTCGTTTTCAAGATCTTCCCGCAAAATCGATATTTCCTGTTTTAGGGAGTTCTCTTCTTTGGTTTTATTTTGTGGTAAATAATCATCAGAATAGCCAGCAGAACACGTACACATTACCAGACGATATTGCAAGTCTTTATTAATTCTTTTCAAGGACTCAATCTCTTGATGCAAACCTTTCAACATGGACTCATGCTGCTTTTGTAGGAAAGTT ] [-] EMBL CD185784 [ TTCCTCTAATTGTTGCATCAAACGTGCATTCTTCTTCCTTTCGTTTTCAAGATCTTCCCGCAAAATCGATATTTCCTGTTTTAGGGAGTTCTCTTCTTTGGTTTTATTTTGTGGTAAATAATCATCAGAATAGCCAGCAGAACACGTACACATTACCAGACGATATTGCAAGTCTTTATTAATTCTTTTCAAGGACTCAATCTCTTGATGCAAACCTTTCAACATGGACTCATGCTGCTTTTGTAGGAAAGTTATGCTGTTGTCTAGTAGGACTTTACGACTGTCGTCATCTAGTTTAGGAGGGCTGATAACAGGTGCTTCTCTTTTACTGGAAGGGAACATAATAGTCTCAACTTTCTTATCTCCAAGTGCATCAGTTTTGGTAGGAAAATTATTAAGAACAATCATAGTCAAGAATTCAGTCTACGGAAACGAAAGTGCGATTAAGTATTTCATATGCATTGT] consensusID : consensus_11025#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 953 fasta sequence [AATTATTATTATTAATTTTTGATCATGATAGAAGAAATGAATTAAACAATCTTTAAAACAATAATTAGAACCAATAAAAATACCGTTTTGTCTTTATAAAACTGTTTTTTCTTTCATGTAATAAACTAGGTAAACGTTTACTTACAGCATTTTAATAATTTAATCTTTGAAATTGATCTAAGTGGAATTCCATTTGAGA-GTTAAATTTGTTGCATGTCTTTATCATTGGGCATTGAACTATTCCACTGACAATATGTCTGCTGCCATCTATAATTAAAACAGTTTTCAATATTCAACAAGCATAATTCATTTAAACGAATGCAA-TTAGAAGCCCCCACTGCATGATTTACCACTTTATCAGTTTAATGAAGATTGAAAATAGAAATATATGGAATGTTATTTTTATTTAAACAAAATTCCAATGCCAATTTTCTTTTTCAAATTGAATTTTCGT-TTCAAATGTTACTATTATTATCACCATTTAAAAAGGTTGAATGTTTTGTTGTG-CACGCTTACGATGTAAGCTTTTCGTAGATTTCTTTTGATGACGATCGTTTTGACGATTCATCATTACATCTGCTGGTTTTGTTAATGACGGTAGAAATGGTTTTAATCCGATTGAATAAGCTTGTGTAACTTTTCTTAAATTTAAATCATGTAATTGTTGTTGAAGATCATGTGAGGTTTTTGAACCAATCGATTTAGTTTGAAGATTATTGGTGGACGCTTCCAAGGTTGTAGCTGAGCTATTGTTGTGCCCTGTGGCACTTCTTATTGGACGAGTTATTTTTAATTCGCTATTGAATGTTTCTTCATTTTTTAATGAACCACGTGTAGGTGAATGCTTTGTATTGTTTGTATTTATTTTATATTGTTCATTACTCAGTGAAGCTTGAATAAGTGGTTTTCTAAGACTTAATGCAGGTAATCGAATCAAATGATGAATTAATCAA] [+] EMBL BF936262 [AATTATTATTATTAATTTTTGATCATGATAGAAGAAATGAATTAAACAATCTTTAAAACAATAATTAGAACCAATAAAAATACCGTTTTGTCTTTATAAAACTGTTTTTTCTTTCATGTAATAAACTAGGTAAACGTTTACTTACAGCATTTTAATAATTTAATCTTTGAAATTGATCTAAGTGGAATTCCATTTGAGA GTTAAATTTGTTGCATGTCTTTATCATTGGGCATTGAACTATTCCACTGACAATATGTCTGCTGCCATCTATAATTAAAA ] [-] EMBL SMAA85770 [ ACCCGTTTGTCTTTATAAAACTGTTTTTTCTTTCATGTAATAAACTAGGTAAACGTTTACTTACAGCATTTTAATAATTTAATCTTTGAAATTGATCTAAGTGGAATTCCATTTGAGA GTTAAATTTGTTGCATGTCTTTATCATTGGGCATTGAACTATTCCACTGACAATATGTCTGCTGCCATCTATAATTAAAACAGTTTTCAATATTCAACAAGCATAATTCATTTAAACGAATGCAA TTAGAAGCCCCCACTGCATGATTTACCACTTTATCAGTTTAATGAAGATTGAAAATAGAAATATATGGAATGTTATTTTTATTTAAACAAAATTCCAATGCCAATTTTCTTTTTCAAATTGAATTTTCGT TTCAAATGTTACTATTATTATCACCATTTAAAAAGGTTGAATGTTTTGTTGTGCCACGCTTACGATGTAAGC ] [-] EMBL SMAA8289 [ AAAACTGTTTTTTCTTTCATGTAATAAACTAGGTAAACGTTTACTTACAGCATTTTAATAATTTAATCTTTGAAATTGATCTAAGTGGAA TCCATTTGAGA G TAAATTTG TGCATGTCTTTATCATTGGGCATTGAACTATTCCACTGACAATATGNCTGCTGCCATCTATAATTAAAACAGTTTTCAATATTCAACAAGCATAATTCATTTAAACGAATGCAA TTAGAAGCCCCCACTGCATGATTTACCACTTTATCAGTTTAATGAAGATTGAAAATAGAAATATATGGAATGTTATTTTTATTTAAACAAAATTCCAATGCCAA TTTCTTTTTCAAATTGAATTTTCGTNNTCAAATGTTACTATTATTATCACCATTTAAAAAGGTTGAATGTTTTGTTGTG CACGCTTACGATGTAAGCTTTTCGT ] [-] EMBL SMAA85815 [ TAATAATTTAATCTTTGAAATTGATCTAAGTGGAATTCCATTTGAGA GTTAAATTTGTTGCATGTCTTTATCATTGGGCATTGAACTATTCCACTGACAATATGTCTGCTGCCATCTATAATTAAAACAGTTTTCAATATTCAACAAGCATAATTCATTTAAACGAATGCAA TTAGAAGCCCCCACTGCATGATTTACCACTTTATCAGTTTAATGAAGATTGAAAATAGAAATATATGGAATGTTATTTTTATTTAAACAAAATTCCAATGCCAATTTTCTTTTTCAAATTGAATTTTCGT TTCAAATGTTACTATTATTATCACCATTTAAAAAGGTTGAATGTTTTGTTGTG CACGCTTACGATGTAAGC ] [-] EMBL SMAA8273 [ GAGAGGTTAAA TTGTTGCATGTCTTTATCATT GGCATTGAACTATTCCACTGACAATATGTCTGCTGCCATCTATAATTAAAACAGTTTTCAATATTCAACAAGCATAATTCATTTAAACGAATGCAA TTAGAAGCCCCCACTGCATGATTTACCACTTTATCAGTTTAATGAAGATTGAAAATAGAAATATATGGAATGTTATTTTTATTTAAACAAAATTCCAATGCCAATTTTCTTTTTCAAATTGAATTTTCGT TTCAAATGTTACTATTATTATCACCATTTAAAAAGGTTGAATGTTTTGTTGTG CACGCTTACGATGTAAGC ] [-] EMBL SMAA85793 [ TAAACGAATGCAATTTGGAAGCCCCCACTGCATGATTTACCACTTTATCAGTTTAATGAAGATTGAAAATAGAAATATATGGAATGTTATTTTTATTTAAACAAAATTCCAATGCCAATTTTCTTTTTCAAATTGAATTTTCGT TTCAAATGTTACTATTATTATCACCATTTAAAAAGGTTGAATGTTTTGTTGTG CACGCTTACGATGTAAGC ] [-] EMBL CD194923 [ TGGAATG TATTTTTATTTAAACAAATTTCCAATGCCAATTTTCTTTTTCAAATTGAATTTTCGT TTCAAATGTTACTATTATTATCACCATTTAAAAAGGTTGAATGTTTTGTTGTG CACGCTTACGATGTAAGCTTTTCGTAGATTTCTTTTGATGACGATCGTTTTGACGATTCATCATTACATCTGCTGGTTTTGTTAATGACGGTAGAAATGGTTTTAATCCGATTGAATAAGCTTGTGTAACTTTTCTTAAATTTAAATCATGTAATTGTTGTTGAAGATCATGTGAGGTTTTTGAACCAATCGATTTAGTTTGAAGATTATTGGTGGACGCTTCCAAGGTTGTAGCTGAGCTATTGTTGTGCCCTGTGGCACTTCTTATTGGACGAGTTATTTTTAATTCGCTATTGAATGTTTCTTCATTTTTTAATGAACCACGTGTAGGTGAATGCTTTGTATTGTTTGTATTTATTTTATATTGTTCATTACTCAGTGAAGCTTGAATAAGTGGTTTTCTAAGACTTAATGCAGGTAATCGAATCAAATGATGAATTAATCAA] [-] EMBL CD061409 [ GTAAGCTTTTCGTAGATTTCTTTGGATGACGATCGTTTTGACGATTCATCATGACATCTGCTGGTTTTGTTAATGACGGTAGAAATGGTTTTAATCCGATTGAATAAGCTTGTGTAACTTTTCTGAAATTTAAATCATGTAATTGTTGTTGAAGATCATGTGAGGTTTTTGAACCAATCGATTTAGTTTGAAGATTATTGGTGGACGCTTCCAAGGTTGTAGCTGAGCTATCCTTCTG CCTGT ] consensusID : consensus_11025#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 460 fasta sequence [GACGGTAGAAATGGTTTTAATCCGATTGAATAAGCTTGTGTAACTTTTCTTAAATTTAAATCATGTAATTGTTGTTGAAGATCATGTGAGGTTTTTGAACCAATCGATTTAGTTTGAAGATTATTGGTGGACGCTTCCAAGGTTGTAGCTGAGCTATTGTTGTGCCCTGTGGCACTTCTTATTGGACGAGTTATTTTTAATTCGCTATTGAATGTTTCTTCA--TTTTTTAATGAACCACGTGTAGGTGAATGCTTTGTATTGTTTGTATTTATTTTATATTGTTCATTACTCAGTGAAGCTTGAATAAGTGGTCTTCTAAGACTTAATGCAGGTAATCGAAATGGTAATAAGTGTGTATTGATTAATTCATCATTTGATTCGATTATTTCCTCTTCTTGTTTTTCAAAAACATGTTCATTATCATACGAATGAAGAATACTTCGTTTTGTCAATAAATTAT] [-] EMBL CD189896 [GACGGTAGAAATGGTTTTAATCCGATTGAATAAGCTTGTGTAACTTTTCTTAAATTTAAATCATGTAATTGTTGTTGAAGATCATGTGAGGTTTTTGAACCAATCGATTTAGTTTGAAGATTATTGGTGGACGCTTCCAAGGTTGTAGCTGAGCTATTGTTGTGCCCTGTGGCACTTCTTATTGGACGAGTTATTTTTAATTCGCTATTGAATGTTTCTTCA TTTTTTAATGAACCACGTGTAGGTGAATGCTTTGTATTGTTTGTATTTATTTTATATTGTTCATTACTCAGTGAAGCTTGAATAAGTGGTCTTCTAAGACTTAATGCAGGTAATCGAAATGGTAATAAGTGTGTATTGATTAATTCATCATTTGATTCGATTATTTCCTCTTCTTGTTTTTCAAAAACATGTTCATTATCATACGAATGAAGAATACTTCGTTTTGTCAATAAATTAT] [-] EMBL CD128477 [ AAATCATGTAATTATTGTTGAAGATCATGTGAGGTTTTTGAACCANTCGATTTAGTTTGAAGATTATTGGTGGACGCTTCCAAGGTTGTAGCTGAGCTATTGTTGTGCCCTGTGGCACTTCTTATTGGACGAGTTATTTTTAATTCGCTA TGAATGTTTCTTCA TTTTTTAATG ACCACGTGg ] [+] EMBL CD128509 [ TCTTATTGGACGAGTTATTTTTAATTCGCTATTGAATGTTTCTTCATTTTTTTTAGTGAACCACGTGTAGGTGAATGCTTTGGATTGTTTGTATTTATTTTATATTGT ] consensusID : consensus_11025#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 393 fasta sequence [CAATTCCTCTAATTGTTGCATCGAACGTGCATTCTTCTTCCTTTCGTTTTCAAGATCTTCCCGCAAAATCCGATATTTCCTGTTTTAGGGAGTTCTCTTCTTTGGTTTTATTTTGTGGTAAATAATCATCAGAATAGCCAGCAGAACACGTACACATTACCAGACGATATTGCAAGTCTGAAAAAATAGAAGTATACGAAATATCCACAACCTTTATTAATTCTTTTCAAGGACTCAATCTCTTGATGCAAACCTTTCAACATGGACTCATGCTGCTTTTGTAGGAAAGTTATGCTCTTGTCTAGTAGGACTTTACGACTGTCGTCATCTAGTTTAGGAGGGCTGATAACAGGTGCTTCTCTTTTACTGGAAGGGAACATAATAGTCTCAACT] [-] EMBL CD188361 [CAATTCCTCTAATTGTTGCATCGAACGTGCATTCTTCTTCCTTTCGTTTTCAAGATCTTCCCGCAAAATCCGATATTTCCTGTTTTAGGGAGTTCTCTTCTTTGGTTTTATTTTGTGGTAAATAATCATCAGAATAGCCAGCAGAACACGTACACATTACCAGACGATATTGCAAGTCTGAAAAAATAGAAGTATACGAAATATCCACAACCTTTATTAATTCTTTTCAAGGACTCAATCTCTTGATGCAAACCTTTCAACATGGACTCATGCTGCTTTTGTAGGAAAGTTATGCTCTTGTCTAGTAGGACTTTACGACTGTCGTCATCTAGTTTAGGAGGGCTGATAACAGGTGCTTCTCTTTTACTGGAAGGGAACATAATAGTCTCAACT] consensusID : consensus_11025#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 339 fasta sequence [TGAGCTATTGTTGTGCCCGGTGGCACTTCTGATTGGACGAGATATTTTTAATTCGCTATTGAATCTATTTCGATTAATAGAAAAGCTTTGAAAAAAGAAACATTCATTCACTGAATGATTAGTAAACAGATACAGATCTATATGCCGAACAAAATTTACTCACAATATTGTGAAGAATATTCACAAAGGGATATGTTGTGGTAGAACGAATGTCGAAGAAAGTGTAACTTTTGCGATTAATTTACGGCTAGCTACTATTCATATCTTTATTGTGTAATTAGTAGATCACTGCATTACTGTATGTCTATATTCGTCATACTCGTAGCTTCGAATGACTCA] [+] EMBL CD195994 [TGAGCTATTGTTGTGCCCGGTGGCACTTCTGATTGGACGAGATATTTTTAATTCGCTATTGAATCTATTTCGATTAATAGAAAAGCTTTGAAAAAAGAAACATTCATTCACTGAATGATTAGTAAACAGATACAGATCTATATGCCGAACAAAATTTACTCACAATATTGTGAAGAATATTCACAAAGGGATATGTTGTGGTAGAACGAATGTCGAAGAAAGTGTAACTTTTGCGATTAATTTACGGCTAGCTACTATTCATATCTTTATTGTGTAATTAGTAGATCACTGCATTACTGTATGTCTATATTCGTCATACTCGTAGCTTCGAATGACTCA] [+] EMBL CD195924 [TGAGCTATTGTTGTGCCCTGTGGCACTTCTTATTGGACGAGTTATTTTTAATTCGCTATTGAATCTATTTCGTTTAATAGAAAAGTTTTGAAAAAAGAAACATTCATTCACTGAATGATTAGTAAACAGAAACAGAAATATAAGCCGAACAAAATTTACTCACAATATTGTGAA ] consensusID : consensus_11025#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 304 fasta sequence [ATGTAATTGTTGTTGAAGATCATGTGAGGTTTTTGAACCGATCGATTTAGTTTGAAGATTATTGGTGGACGCTTCCAAGGTTGTAGCTGAGCTATTGTTGTGCCCTGTGGCACTTCTTATTGGACGAGTTATTTTTAATTCGCTATTGAATGTTTCTTCATTTTTTAATGAACCACGTGTAGGTGAATGCTTTGTATTGTTTGTATTTATTTTACATTGTTCATTACTCTGTGAAGCTTGAATAAGTGGTTTTCTAAGACTTAATACAGGTAATCGAAATGGTAATAAGTGCGCTCAGGATTTT] [-] EMBL CD065785 [ATGTAATTGTTGTTGAAGATCATGTGAGGTTTTTGAACCGATCGATTTAGTTTGAAGATTATTGGTGGACGCTTCCAAGGTTGTAGCTGAGCTATTGTTGTGCCCTGTGGCACTTCTTATTGGACGAGTTATTTTTAATTCGCTATTGAATGTTTCTTCATTTTTTAATGAACCACGTGTAGGTGAATGCTTTGTATTGTTTGTATTTATTTTACATTGTTCATTACTCTGTGAAGCTTGAATAAGTGGTTTTCTAAGACTTAATACAGGTAATCGAAATGGTAATAAGTGCGCTCAGGATTTT] consensusID : consensus_11025#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 112 fasta sequence [AAACGAAAGTGCGATTAAGTATTTCATATGCATTGTATCCTTGTTCCCAGTTGAGGTTCCTAGATTTAAAACCTATGGACGAATTCGTCCTCTTAATTAGTGAGCCAAAGCC] [+] EMBL BG932740 [AAACGAAAGTGCGATTAAGTATTTCATATGCATTGTATCCTTGTTCCCAGTTGAGGTTCCTAGATTTAAAACCTATGGACGAATTCGTCCTCTTAATTAGTGAGCCAAAGCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11025#1 -----------------------AATTATTATTATTAATTTTTGATCATGATAGAAGAAA 37 consensus_11025#5 ------------------------------------------------------------ consensus_11025#2 ------------------------------------------------------------ consensus_11025#0 TTACATACATATTGAAGCAAAACAGTAATAAAAGACTTACGTTTCTTCATTTTTTAATGA 60 consensus_11025#3 ------------------------------------------------------------ consensus_11025#6 ------------------------------------------------------------ consensus_11025#4 ------------------------------------------------------------ consensus_11025#1 TGAATTAAACAATCTTTAAAACAATAATTAGAACCAATAAAAATACCGTTTTGTCTTTAT 97 consensus_11025#5 ------------------------------------------------------------ consensus_11025#2 ------------------------------------------------------------ consensus_11025#0 ACCACGTGTAGGTGAATGCTTTGTATTGTTTGTATTTATTTTATATTGTTCATTACTCAG 120 consensus_11025#3 ------------------------------------------------------------ consensus_11025#6 ------------------------------------------------------------ consensus_11025#4 ------------------------------------------------------------ consensus_11025#1 AAAACTGTTTTTTCTTTCATGTAATAAACTAGGTAAACGTTTACTTACAGCATTTTAATA 157 consensus_11025#5 ------------------------------------------------------------ consensus_11025#2 ------------------------------------------------------------ consensus_11025#0 TGAAGCTTGAATAAGTGGTTTTCTAAGACTTAATGCAGGTAATCGAAATGGTAATAAGTG 180 consensus_11025#3 ------------------------------------------------------------ consensus_11025#6 ------------------------------------------------------------ consensus_11025#4 ------------------------------------------------------------ consensus_11025#1 ATTTAATCTTTGAAATTGATCTAAGTGGAATTCCATTTGAGAGTTAAATTTGTTGCATGT 217 consensus_11025#5 ------------------------------------------------------------ consensus_11025#2 ------------------------------------------------------------ consensus_11025#0 TGTATTGATTAATTCATCATTTGATTCGATTATTTCCTCTTCTTGTTTTTCAAAAACATG 240 consensus_11025#3 ------------------------------------------------------------ consensus_11025#6 ------------------------------------------------------------ consensus_11025#4 ------------------------------------------------------------ consensus_11025#1 CTTTATCATTGGGCATTGAACTATTCCACTGACAATATGTCTGCTGCCATCTATAATTAA 277 consensus_11025#5 ------------------------------------------------------------ consensus_11025#2 ------------------------------------------------------------ consensus_11025#0 TTCATTATCATACGAATGAAGAATACTTCGTTTTGTCAATAAATTATTTCCTGGTATACT 300 consensus_11025#3 ------------------------------------------------------------ consensus_11025#6 ------------------------------------------------------------ consensus_11025#4 ------------------------------------------------------------ consensus_11025#1 AACAGTTTTCAATATTCAACAAGCATAATTCATTTAAACGAATGCAATTAGAAGCCCCCA 337 consensus_11025#5 ------------------------------------------------------------ consensus_11025#2 ------------------------------------------------------------ consensus_11025#0 CAGCGTTGTTGATGATTTATTTGGAACTGAATGAGAAGTGGTTGGTATAAGTTTATTGAC 360 consensus_11025#3 ------------------------------------------------------------ consensus_11025#6 ------------------------------------------------------------ consensus_11025#4 ------------------------------------------------------------ consensus_11025#1 CTGCATGATTTACCACTTTATCAGTTTAATGAAGATTGAAAATAGAAATATATGGAATGT 397 consensus_11025#5 ------------------------------------------------------------ consensus_11025#2 ------------------------------------------------------------ consensus_11025#0 TGATAATGTTCCAGTTGTAGGTGCAATCGGGTTCTTATTTACAGTGACTGTGTCTGTTAT 420 consensus_11025#3 ------------------------------------------------------------ consensus_11025#6 ------------------------------------------------------------ consensus_11025#4 ------------------------------------------------------------ consensus_11025#1 TATTTTTATTTAAACAAAATTCCAATGCCAATTTTCTTTTTCAAATTGAATTTTCGTTTC 457 consensus_11025#5 ------------------------------------------------------------ consensus_11025#2 ------------------------------------------------------------ consensus_11025#0 GAAATCGGTATTTTTGCTCGAGACATCTTGACATCCTTTTAAGAATTCACTATTATCATG 480 consensus_11025#3 ------------------------------------------------------------ consensus_11025#6 ------------------------------------------------------------ consensus_11025#4 ------------------------------------------------------------ consensus_11025#1 AAATGTTACTATTATTATCACCATTTAAAAAGGTTGAATGTTTTGTTGTGCACGCTTACG 517 consensus_11025#5 ------------------------------------------------------------ consensus_11025#2 ------------------------------------------------------------ consensus_11025#0 GTGAGTTTGACTTTTGTTTAAACTCTGGAACATTTCATCATTCTTTGAAATATTCTTCTG 540 consensus_11025#3 ------------------------------------------------------------ consensus_11025#6 ------------------------------------------------------------ consensus_11025#4 ------------------------------------------------------------ consensus_11025#1 ATGTAAGCTTTTCGTAGATTTCTTTTGATGACGATCGTTTTGACGATTCATCATTACATC 577 consensus_11025#5 ------------------------------------------------------------ consensus_11025#2 ------------------------------------------------------------ consensus_11025#0 CTCTGAATACGTCGACAATCGTCCATTTTTACACGCAAATCTTGGAAGTCCTTTGACAGG 600 consensus_11025#3 ------------------------------------------------------------ consensus_11025#6 ------------------------------------------------------------ consensus_11025#4 ------------------------------------------------------------ consensus_11025#1 TGCTGGTTTTGTTAATGACGGTAGAAATGGTTTTAATCCGATTGAATAAGCTTGTGTAAC 637 consensus_11025#5 ------------------------------------------------------------ consensus_11025#2 ----------------GACGGTAGAAATGGTTTTAATCCGATTGAATAAGCTTGTGTAAC 44 consensus_11025#0 ATTCTGGGGTACTTGCAATTCCTCTAATTGTTGCATCAAACGTGCATTCTTCTTCCTTTC 660 consensus_11025#3 ---------------CAATTCCTCTAATTGTTGCATCGAACGTGCATTCTTCTTCCTTTC 45 consensus_11025#6 ---------------------------------AAACGAAAGTGCGATTAAGTATTTCAT 27 consensus_11025#4 -------TGAGCTATTGTTGTGCCCGGTGGCACTTCTGATTGGACGAGATATTTTTAATT 53 consensus_11025#1 TTTTCTTAAATTTAAATCATGTAATTGTTGTTGAAGATCATGTGAGG--TTTTTGAACCA 695 consensus_11025#5 ------------------ATGTAATTGTTGTTGAAGATCATGTGAGG--TTTTTGAACCG 40 consensus_11025#2 TTTTCTTAAATTTAAATCATGTAATTGTTGTTGAAGATCATGTGAGG--TTTTTGAACCA 102 consensus_11025#0 GTTTTCAAGATCTTCCCGCAAAATC-GATATTTCCTGTTTTAGGGAGTTCTCTTCTTTGG 719 consensus_11025#3 GTTTTCAAGATCTTCCCGCAAAATCCGATATTTCCTGTTTTAGGGAGTTCTCTTCTTTGG 105 consensus_11025#6 ATGCATTGTATCCTTGTTCCCAGTT-GAGGTTCCTAGATTTAAAA----CCTATGGACGA 82 consensus_11025#4 CGCTATTGAATCTATTTCGATTAATAGAAAAGCTTTGAAAAAAGAAACATTCATTCACTG 113 * * consensus_11025#1 ATCGATTTAGTTTGAAGATTATTGGTGGACGCTTCCAAGGTTGTAGCTGAGCTATTGTTG 755 consensus_11025#5 ATCGATTTAGTTTGAAGATTATTGGTGGACGCTTCCAAGGTTGTAGCTGAGCTATTGTTG 100 consensus_11025#2 ATCGATTTAGTTTGAAGATTATTGGTGGACGCTTCCAAGGTTGTAGCTGAGCTATTGTTG 162 consensus_11025#0 TTTTATTT--TGTGGTAAATAATCATCAGAATAGCCAGCAGAACACGTACAC-ATTACCA 776 consensus_11025#3 TTTTATTT--TGTGGTAAATAATCATCAGAATAGCCAGCAGAACACGTACAC-ATTACCA 162 consensus_11025#6 ATTCGTCC--TCT--TAATTAGTGAGCCAA--AGCC------------------------ 112 consensus_11025#4 AATGATTA--GTAAACAGATACAGATCTATATGCCGAACAAAATTTACTCAC-AATATTG 170 * ** * consensus_11025#1 TGCCCTGTGGCACTTCTTATTGGACGAGTTATTTTTAATTCGCTATTGAATGTTTCTTCA 815 consensus_11025#5 TGCCCTGTGGCACTTCTTATTGGACGAGTTATTTTTAATTCGCTATTGAATGTTTCTTCA 160 consensus_11025#2 TGCCCTGTGGCACTTCTTATTGGACGAGTTATTTTTAATTCGCTATTGAATGTTTCTTCA 222 consensus_11025#0 GACGATATTGCAAGTCT----------------------------------TTATTAATT 802 consensus_11025#3 GACGATATTGCAAGTCTGAAAAAATAGAAGTATACGAAATATCCACAACCTTTATTAATT 222 consensus_11025#6 ------------------------------------------------------------ consensus_11025#4 TGA---AGAATATTCACAAAGGGATATGTTGTGGTAGAACGAATGTCGAAGAAAGTGTAA 227 consensus_11025#1 TTTTT-TAATGAACCA-CGTGTAGGTGAATGCTTTGTATTGTTTGTATTTATTTTATATT 873 consensus_11025#5 TTTTT-TAATGAACCA-CGTGTAGGTGAATGCTTTGTATTGTTTGTATTTATTTTACATT 218 consensus_11025#2 TTTTT-TAATGAACCA-CGTGTAGGTGAATGCTTTGTATTGTTTGTATTTATTTTATATT 280 consensus_11025#0 CTTTT-CAAGGACTCAATCTCTTGATGCAAACCTTTCAACATGGACTCATGCTGCTTTTG 861 consensus_11025#3 CTTTT-CAAGGACTCAATCTCTTGATGCAAACCTTTCAACATGGACTCATGCTGCTTTTG 281 consensus_11025#6 ------------------------------------------------------------ consensus_11025#4 CTTTTGCGATTAATTTACGGCTAGCT--ACTATTCATATCTTTATTGTGTAATTAGTAGA 285 consensus_11025#1 GTTCATTACTCAGTGAAGCTTGAATAAGTGGTTTTCTAAGACTTAATGCAGGTAATCGAA 933 consensus_11025#5 GTTCATTACTCTGTGAAGCTTGAATAAGTGGTTTTCTAAGACTTAATACAGGTAATCGAA 278 consensus_11025#2 GTTCATTACTCAGTGAAGCTTGAATAAGTGGTCTTCTAAGACTTAATGCAGGTAATCGAA 340 consensus_11025#0 TAGGAAAGTTATGCTGTTGTCTAGTAGGACTTTACGACTGTCGTCATCTAGTTTAGGAGG 921 consensus_11025#3 TAGGAAAGTTATGCTCTTGTCTAGTAGGACTTTACGACTGTCGTCATCTAGTTTAGGAGG 341 consensus_11025#6 ------------------------------------------------------------ consensus_11025#4 TCACTGCATTACTGTATGTCTATATTCGTCATACTCGTAGCTTCGAATGACTCA------ 339 consensus_11025#1 TCAAATGATGAAT-TA-ATCAA-------------------------------------- 953 consensus_11025#5 ATGG-TAATAAGTGCG-CTCAGGATTTT-------------------------------- 304 consensus_11025#2 ATGG-TAATAAGTGTGTATTGATTAATTCATCATTTGATTCGATTATTTCCTCTTCTTGT 399 consensus_11025#0 GCTGATAACAGGTGCTTCTCTTTTACTGGAAGGGAACATAATAGTCTCAACTTTCTTATC 981 consensus_11025#3 GCTGATAACAGGTGCTTCTCTTTTACTGGAAGGGAACATAATAGTCTCAACT-------- 393 consensus_11025#6 ------------------------------------------------------------ consensus_11025#4 ------------------------------------------------------------ consensus_11025#1 ------------------------------------------------------------ consensus_11025#5 ------------------------------------------------------------ consensus_11025#2 TTTTCAAAAACATGTTCATTATCATACGAATGAAGAATACTTCGTTTTGTCAATAAATTA 459 consensus_11025#0 TCCAAGTGCATCAGTTTTGGTAGGAAAATTATTAAGAACAATCATAGTCAAGAATTCAGT 1041 consensus_11025#3 ------------------------------------------------------------ consensus_11025#6 ------------------------------------------------------------ consensus_11025#4 ------------------------------------------------------------ consensus_11025#1 ------------------------------------------ consensus_11025#5 ------------------------------------------ consensus_11025#2 T----------------------------------------- 460 consensus_11025#0 CTACGGAAACGAAAGTGCGATTAAGTATTTCATATGCATTGT 1083 consensus_11025#3 ------------------------------------------ consensus_11025#6 ------------------------------------------ consensus_11025#4 ------------------------------------------ |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||