|
These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11028#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 28 consensus length = 1535 fasta sequence
[TGATTGGCCCAGCCTGACCTTGGGGATTTTTTGACCTTTGAAGATGAAGGTCGTTCTCCATAACGTTCTCTCCTGATGGGAAGTTTAGAGGAGTCCAGATTGCCACTGGAGATCAAAACGAAACTAGCAGAGCTTGAAATTGAACTTTCGGAAGGTGATATAACAGAAAAAGGATACCAGAAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCATCATTTAGGCCCACGCGGCCAGGCTGTTGGTTGTGGTGATAATGTTACAGAGTCTTTCAGAAACGAGCCCCAAAA-TAATTCTCCTATTAATGCTCAAAATCGCAGATACATTCGTGAAAATCATCGATATCGATCGGATATC-CGAGAAGAGGCAGTGAAGGAGGCTTTAGTAC-AAGCTCGGCAGGAACGTCATGATGCTTTGGCACCTAGTAAACGTCGTGACCCCAGTCGTTTGTCCTGTATACATCAAACTCCTGAACACGATGCAGCATATTCTGATGATTCGGATGAAGATATGTCATCAACATCTGCACACATTACGCGTTTAGGGAACAATTTTAACCAGTCATCGGGATTAAGTGAAATCCCAAGTTCAAGTGTACCGACAAATGGCGTTTCCGACAGAAATCAACTTAGAACATCAACTACTATTACTGGTCAGATACACAAAC-AACAATCCCCTGCTAATCGATATGATGAAGTGCCTTCTTTAGATGAAATTCGATCCTCTCAACCACCGATTCGATCATCAAATAGAATAAATCAATCAGATGTAAATAATCCATGGACTTACACAAACCAGCCTTCTAATCAACAAAATGGTAATTTAGATGGAGCATTGAATACGGCTGATTCGTTTGAACAGTTAGCTGCTCTTGCTGAAGCTCAGTTAAATTCTAATAATATAGGGATGTACGATTATCCTGATCCATCAGTTAATACTAATTTTCATCAATCTCGAGCGATTTCTACAGCTTATCAACCCCAGTCTGGAATCAATTCGTGTCCAATATCCATGACTCAGAACGGTCAGCGATCTCATATATTTGGCAGTGTTAGTGTGCTCCCTAG--TTGCCAGTGGTGTTATATCAAATGGTAATTCAGGACATGCAAGTCATGAATTCGTTCCTTCATCATCAGCGTATGACTTACAACAAGGTCAACAAGAACAGTATTCTCAGTCGAACCAGCCGGTCTCACTAGCGTCTTCTTCATCTGCTGATCTTGATAATAGTAATGATAGGAAGTTCTCAGCACCAGCAACAGGAGAGTCTATTGGACAAGATCCTTCCTCAGATACCAGTCAAACAACAGGCCTGGTATGTCATAATCGTGTATCAGAAAAAATTCAAAAATTAGTCAACATTTTGAAACGTCCCAAACGATATCCATTACCCGAATATTTTCTTGATGATGAAGATCAAGTACTTGTAAGACCTGTTGTTGATCCTACGG]
[+] EMBL CD097474 [TGATTGGCCCAGCCTGACCTTGGGGATTTTTTGACCTTTGAAGATGAAGGTCGTTCTCCATAACGTTCTCTCCTGATGGGAAGTTTAGAGGAGTCCAGATTGCCACTGGAGATCAAAACGAAACTAGCAGATCTTGAATTTGAACTTTCGGAAGGTGATATAACAGAAAAAGGATACCAGAAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCATTATTTAGGCCCACGCGGCCAGGCTGTTGGTTGGGGTGATAATGCTACAGAGTCTTTCAGAAACGAGCCCCAAAA TAATTCTGCTATTAATGCTCAAAATCGCATATACA ]
[-] EMBL CD067028 [ TTTTGACCTTTGAAGATGAAGGTCGTTCTCCATAACGTTCTCTCCTGATGGGAAGTTTAGAGGAGTCCAGATTGCCACTGGAGATCAAAACGAAACTAGCAGAGCTTGAAATTGAACTTTCGGAAGGTGATATAACAGAAAGAGGATACCAGAAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCATCATTTAGGCCCACGCGGCCAGGCTGTTGGTTGTGGTGATAATGTTACAGAGTCTTTCAGAAACGAGCCCCA ]
[+] EMBL CD183366 [ TTTTGACCTTTGAAGATGAAGGTCGTTCTCCATAACGTTCTCTCCTGATGGGAAGTTTAGAGGAGTCCAGATTGCCACTGGAGATCAAAACGAAACTAGCAGAGCTTGAAATTGAACTTTCGGAAGGTGATATAACAGAAAAAGGATACCAGAAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCATCATTTAGGCCCACGCGGCCAGGCTGTTGGTTGTGGTGATAATGTTACAGAGTCTTTCAGAAACGAGCCCCAAAA TAATTCTCCTATTAATGCTCAAAATCGCAGATACATTCGTGAAAATCATCGATATCGATCGGATATC CGAGAAGAGGCAGTGAAGGAGGCTTTAGT ]
[+] EMBL CD097473 [ GACCTTTGAAGATGAAGGTCGTTCTCCATAACGTTCTCTCCTGATGGGAAGTTTAGAGGAGTCCAGATTGCCACTGGAGATCAAAACGAAACTAGCAGAGCTTGAAATTGAACTTTCGGAAGGTGATATAACAGAAAAAGGATACCAGAAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCATCATTTAGGCCCACGCGGCCAGGCTGTTGGTTGTGGTGATAATGTTACAGAGTCTTTCAGAAACGAGCCCCAAAA TAATTCTCCTATTAATGCTCAAAATCGCAGATACATTCGTGAAAATCATCGATATCGATCGGATATC CGAGAAGAGGCAGTGAAGGAGGCTTTAGTAC AAGCTCGGCAGGAACGTCATGATGCTTTGGCACCTAGTAAACGTCGTGACCCCAGTCGTTTGTCCTGTATACATCAAACTCCTGAACACGATGCAGCATATTCTGATGATTCGGATGAAGATATGTCATCAACATCTGCACACATTACGCGTTTAGGGAACAATTTTTACCAGTCATCGGGATTAA ]
[+] EMBL CD188699 [ GATGAAGGTCGTTCTCCATAACGTTCTCTCCTGATGGGAAGTTTAGAGGAGTCCAGATTGCCACTGGAGATCAAAACGAAACTAGCAGAGCTTGAAATTGAACTTTCGGAAGGTGATATAACAGAAAAAGGACACCAGAAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCATCATTTAG ]
[-] EMBL CD170674 [ GTCGTTCTCCAGAACGTTCTCTCCTGATGGGAAGTTTAGAGGAGTCCAGATTGCCACTGGAGATCAAAACGAAACTAGCAGAGCTTGAAATTGAACTTTCGGAAGGTGATATAACAGAAAAAGGATACCAGAAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCATCATTTAGGCCCACGCGGCCAGGCTGTTGGTTGTGGTGATAATGTTACAGAGTCTTTCAGAAACGAGCCCCAAAA TAATTCTCCTATTAATGCTCAAAATCGCAGATACATTCGTGAAAATCATCGATATCGATCGGATATC CGAGAAGAGGCAGTGAAGGAG ]
[-] EMBL CD110924 [ ACGTTCTCTCCTGATGGGAAGTTCAGAGGAGTCCAGATCGCCACTGGAGATCAAAACGAAACTAGCAGAGCTTGAAATTGAACTTTCGGAAGGTGATATAACAGAAAAAGGATACCAGAAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAGACGCATCATTTAGGCCCACGCGGCCAGGCTGTTGGTTGTGGTGATAATGTCACAGAGTCTTTCAGACACGAGCCCCAAAAGTAATTCTCCTATTAATGCTCAAAATCGCAGATACATTCGTGAAAATCATCGATATCGATCGGATATCTCGAGAAGAGGCAGTGAAGGAGGCTTTAGTAC AAGATCGGCAGGAACGTCATGATcgc ]
[+] EMBL CD067235 [ GAAACTAGCAGAGCTTGAAATTGAACTTTCGGAAGGTGATATAACAGAAAAAGGATACCAGAAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCATCATTTAGGCCCACGCGGCCAGGCTGTTGGTTGTGGTGATAATGTTACAGAGTCTTTCAGAAACGAGCC ]
[+] EMBL CD169692 [ AACTTTCGGAAGGTGATATAACAGAAAAAGGATACCAGAAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCATCATTTAGGCCCACGCGGCCAGGCTGTTGGTTGTGGTGATAATGTTACAGAGTCTTTCAGAAACGAGCCCCAAAA TAATTCTCCTATTAATGCTCAAAATCGCAGATACATTCGTGAAAATCATCGATATCGATCGGACATC CGAGAAGAGGCAGTGAAGGAGGCTTTAGTAC AAGCTCGGCAGGAACGTCATGATGCTTTGGCACCTAGTAAACGTCGTGACCCCAGTCGTTTGTCCTGTATACATCAAACTCCTGAACACGATGCAGCATATTCTGATGATTCGGATGAAGATATGTCATCAACATCTGCACACATTACGCGTTTAGGGAACAATTTTAACCAGTCATCGGGATTAAGTGAAATCCCAAGTTCAAGTGTACCGACAAATGGCGTTTCCGACAGAAATCAACTTAGACCATCA ]
[-] EMBL CD128160 [ AAAAAGGATACCAGAAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCATCATTTAGGCCCACGCGGCCAGGCTGTTGGTTGTGGTGATAATGTTACAGAGTCTTTCAGAAACGAGCCCCAAAA TAATTCTCCTATTAATGCTCAAAATCGCAGATACATTCGTGAAAATCATCGATATCGATCGGATATC CGAGAAGAGGCAGTGAAGGAGGCTTTAGTAC AAGCTCGGCAGGAACGTCATGA ]
[+] EMBL CD066379 [ TACCAAAAAAATAATCAAAGGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGCACTCAATGAAACGCATCATTT ]
[-] EMBL CD066553 [ CTAAAATAATTCATCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCATCATTTAGGCCCACGCGGCCAGGCTGTTGGTTGTGGTGATAATGTTACAGAGTCTTTCAGAAACGAGCCCCA ]
[-] EMBL CD160286 [ AAAATCATCGATATCGATCGGATATC CGAGAAGAGTCAGTGAAGGAGGCTTTAGTAC AAGCTCGGCAGGAACGTCATGATGCTTTGGCACCTAGTAAACGTCGTGACCCCAGTCGTTTGTCCTGTATACATCAAACTCCTGAACACGATGCAGCATATTCTGATGATTCGGATGAAGATATGTCATCAACATCTGCACACATTACGCGTTTAGGGAACAATTTTAACCAGTCATCGGGATTAAGTGAAATCCCAAGTTCAAGTGTACCGACAAATGGCGTTTCCGACAGAAATCAACTTAGAACATCAACTACTATTACTGGTCAGATACACAAAC AACAATCCCCTGCTAATCGATATGATGAAGTGCCTTCTTTAGATGAAATTCGATCCTCTCAACCACCGATTCGATCATCAAATAGAATAAATCAATCAGATGTAAATAATCCATGGACTT ]
[+] EMBL CD119986 [ AGTGAAGGAGGCTTTAGTAC AAGCTCGGCAGGAACGTCATGATGCTTTGGCACCTAGTAAACGTCGTGACCCCAGTCGTTTGTCCTGTATACATCAAACTCCTGAACACGATGCAGCATATTCTGATGATTCGGATGAAGATGTGTCATCAACATCTGCACACATTACGCGTTTAGGGAACAATTTTAACCAGTCATCGGGATTAAGTGAAATCCCAAGTTCAAGTGTACCGACAAATGGCGTTTCCGACAGAAATCAACTTAGAACATCAACTACTATTACTGGTCAGATACACAAAC AACAATCCCCTGCTAATCGATATGATGAAGTGCCTTCTTTAGATGAAATTCGATCCTCTC ]
[+] EMBL CD120125 [ GTGAAGGAGGCTTTAGTAC AAGCTCGGCAGGAACGTCATGATGCTTTGGCACCTAGTAAACGTCGTGACCCCAGTCGTTTGTCCTGTATACATCAAACTCCTGAACACGATGCAGCATATTCTGATGATTCGGATGAAGATATGTCATCAACATCTGCACACATTACGCGTTTAGGGAACAATTTTAACCAGTCATCGGGATTAAGTGAAATCCCAAGTTCAAGTGTACCGACAAATGGCGTTTCCGACAGAAATCAACTTAGAACATCAACTACTATTACTGGTCAGATACACAAACAAACAAT CCCTGCTAATCGATATGATGAAGTGCCTTCTCTAGATGAAATTCGATCCTCT ]
[-] EMBL CD160125 [ AGGAGGCTTTAGTAC AAGCTCGGCAGGAACGTCATGATGCTTTGGCACCTAGTAAACGTCGTGACCCCAGTCGTTTGTCCTGTATACATCAAACTCCTGAACACGATGCAGCATATTCTGATGATTCGGATGAAGATATGTCATCAACATCTGCACACATTACGCGTTTAGGGAACAATTTTAACCAGTCATCGGGATTAAGTGAAATCCCAAGTTCAAGTGTACCGACAAATGGCGTTTCCGACAGAAATCAACTTAGAACATCAACTACTATTACTGGTCAGATACACAAAC AACAATCCCCTGCTAATCGATATGATGAAGTGCCTTCTTTAGATGAAATTCGATCCTCTCAACCACCGATTCGATCATCAAATAGAATAAATCAATCAGATGTAAATAATCCATGGACTT ]
[-] EMBL CD141166 [ GGC TTAGTACAAAGCTCGGCAGGAACGTCATGATGCTNT GCACCTAGTAAACGTCGTGACNCCAGTCGTTTGTCCTGTATACATCAAACTCCTGAACACGATGCAGCATATTCTGATGATTCGGATGAAGATATGTCATCAACATCTGCACACATTACGCGTTTAGGGAACAATTTTAACCAGTCATCGGGATTAAGTGAAATCCCAAGTTCAAGTGTACCGACAAATGGCGTTTCCGACAGAAATCAACTTAGAACATCAACTACTATTACTGGTCAGATACACAAAC AACAATCCCCTGCTAATCGATATGATGAAGTGCCTTCTTTAGATG ]
[-] EMBL CD066517 [ GATGCTNTGGCACCTAGTAAACGTCGTGACCCCAGTCGTTTGTCCTGTATACATCAAACTCCTGAACACGATGCAGCATATTCTGATGATTCGGATGAAGATATGTCATCAACATCTGCACACATTACGCGTTTAGGGAACAATTTTAACCAGTCATCGGGATTAAGTGAAATCCCAAGTTCAAGTGTACCGACAAATGGCGTTTCCGACAGAAATCAACTTAGAACATCAACTACTATTACTGGTCAGATACACAAAC AACAATCCCCTGCTAATCGATATGATGAAGTGCCTTCTTTAGATGAAATTCGATCCTCTCAACCACCGATTCGATCATCAAATAGAATAAATCAATCAGATGTAAATAATCCATGGACTTACACAAACCAGCCTTCTAATCAACAAAATGGTAATTTAGATGGAGCATTGAATACGGCTGATTCGTTTGAACAGTTAGCTGCTCTTGCTGAAGCTCAGTTAAATTCTAATAATATAGGGAT ]
[-] EMBL CD160365 [ TTGGCACCTAGTAAACGTCGTGACCCCAGTCGTTTGTCCTGTATACATCAAACTCCTATACACGATGCAGCATATTCTGATGATTCGGATGAAGATATGTCATCAACATCTGCACACATTACGCGTTTAGGGAACAATTTTAACCAGTCATCGGGATTAAGTGA ]
[-] EMBL CD160096 [ AACACGATGCAGCATATTCTGATGATTCGGATGAAGATATGTCATCAACATCGGCACACATTACGCGTTTAGGGAACAATTTTAACCAGTCATCGGGATTAAGTGAAATCCCAAGTTCAAGTGTACCGACAAATGGCGTTTCCGACAGAAATCAACTTAGAACATCAACTACTATTACTGGTCAGATACACAAAC AACAATCCCCTGCTAATCGATATGATGAAGTGCCTTCTTTAGATGAAATTCGATCCTCTCAACCACCGATTCGATCATCAAATAGAATAAATCAATCAGATGTAAATAATCCATGGACTT ]
[-] EMBL CD067128 [ TAGGGAACAATTTTAACCAGTCATCGGGATTAAGTGAAATCCCAAGTTCAAGTGTACCGACAAATGGCGTTTCCGACAGAAATCAACTTAGAACATCAACTACTATTACTGGTCAGATACACAAAC AACAATCCCCTGCTAATCGATATGATGAAGTGCCTTCTTTAGATGAAATTCGATCCTCTCAACCACCGATTCGATCATCAAATAGAATAAATCAATCAGATGTAAATAATCCATGGACTTACACAAACCAGCCTTCTAATCAACAAAATGGTAATTTAGATGGAGCATTGAATACGGCTGATTCGTTTGAACAGTTAGCTGCTCTTGCTGAAGCTCAGTTAAATTCTAATAATATAGGGAT ]
[+] EMBL CD063656 [ aCGACAAATGGCGTTTCCGACAG AATCAACTTAGAACATCAACTACTATTACTGGTCAGATACACAAAC AACAATCCCCTGCTAATCGATATGATGAAGTGCCTTCTTTAGATGAAATTCGATCCTCTCAACCACCGATTCGATCATCAAATAGAATAAATCAATCAGATGTAAATAATCCATGGACTTACACAAACCAGCCTTCTAATCAACAAAATGGTAATTTAGATGGAGCATTGAATACGGCTGATTCGTTTGAACAGTTAGCTGCTCTTGCTGAAGCTCAGTTAAATTCTAATAATATAGGGATGTACGATTATCCTGATCCATCAGTTAATACTAATTTTCATCAATCTCGAGCGATTTCTACAGCTTATCAACCCCAGTCTGGAATCAATTCGTGTCCAATATCCA ]
[+] EMBL CD136390 [ CAACTTAGAACATCAACTACTATTACTGGTCAGATACACAAAC AACAATCCCCTGCTAATCGATATGATGAAGTGCCTTCTTTAGATGAAATTCGATCCTCTCAACCACCGATTCGATCATCAAATAGAATAAATCAATCAGATGTAAATAATCCATGGACT ]
[-] EMBL CD149465 [ ATTTAGATGGAGCATTGAATACGGCTGATTCGTTTGAACAGTTAGCTGCTCTTGCTGAAGCTCAGTTAAATTCTAATAATATAGGGATGTACGATTATCCTGATCCATCAGTTAATACTAATTTTCATCAATCTCGAGCGATTTCTACAGCTTATCAACCCCAGTCTGGAATCAATTCGTGTCCAATATCCATGACTCAGAACGGTCAGCGATCTCATATATTTGGCAGTGTTAGTGTGCTCCCTAG TTGCCAGTGGTGTTATATCAAATGGTAATTCAGGACATGCAAGTCATGAATTCGTTCCTTCATCATCAGCGTATGACTTACAACAAGGTCAACAAGAACAGTATTCTCAGTCGAACCAGCCGGTCTCACTAGCGTCTTCTTCATCTGCTGATCTTGATAATAGTAATG ]
[+] EMBL CD195517 [ GGCTGATTCGTTTGAACAGTTAGCTGCTCTTGCTGAAGCTCAGTTAAATTCTAATAATATAGGGATGCACGATTATCCTGATCCATCAGTTAATACTAATTTTCATCAATCTCGAGCGATTTCTACAGCTTATCAACCCCAGTCTGGAATCAATTCGTGTCCAATATCCATGACTCAGAACGGTCAGCGATCTCATATATTTGGCAGTGTTAGTGTGCTCCCTAGTTTTGCCAGTGGTGTTATATCAAATGGTAATTCAGGACATGCAAGTCATGAATTCGTTCCTTCATCATCAGCGTATGACTTACAACAAGGTCAACAAGAACAGTATTCTCAGTCGAACCAGCCGGTCTCACTAGCGTCTTCTTCAT ]
[-] EMBL CD195430 [ ACAGTTAGCTGCTCTTGCTGAAGCTCAGTTAAATTCTAATAATATAGGGATGTACGATTATCCTGATCCATCAGTTAATACTAATTTTCATCAATCTCGAGCGATTTCTACAGCTTATCAACCCCAGTCCGGAATCAATTCGTGTCCAATATCCATGACTCAGAACGGTCAGCGATCTCATATATTTGGCAGTGTTAGTGTGCTCCCTAGTTTTGCCAGTGGTGTTATATCAAATGGTAATTCAGGACATGCAAGTCATGAATTCGTTCCTTCATCATCAGCGTATGACTTACAACAAGGTCAACAAGAACAGTATTCTCAGTCGAACCAGCCGGTCTCACTAGCGTCT ]
[+] EMBL CD066410 [ CATGAATTCGTTCCTTCATCATCAGCGTATGACTTACAACAAGGTCAACAAGAACAGTATTCTCAGTCGAACCAGCCGGTCTCACTAGCGTCTTCTTCATCTGCTGATCTTGATAATAGTAATGATAGGAAGTTCTCAGCACCAGCAACAGGAGAGTCTATTGGACAAGATCCTTCCTCAGATACCAGTCAAACAACAGGCCTGGTATGTCATAATCGTGTATCAGAAAAAATTCAAAAATTAGTCAACATTTTGAAACGTCCCAAACGATATCCATTACCCGAATATTTTCTTGATGATGAAGATCAAGTACTTGTAAGACCTGTTGTTGATCCTACGG]
[+] EMBL CD067512 [ cgTGAGTTCGTTCCTTCATCATCAGCGTATGACTTACAACAAGGTCAACAAGAACAGTATTCTCAGTCGAACCAGCCGGTCTCACTAGCGTCTTCTTCATCTGCTGATCTTGATAATAGTAATGATAGGAAGTTCTCAGCACCAGCAACAGGAGAGTCTATTGGACAAGATCCTTCCTCAGATACCAGTCA ]
consensusID : consensus_11028#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 193 fasta sequence
[CAAATAGAATGAATCAATCAGATGTAAATAATCCATGGATTTACACAAACCAGCTTTATAATCAACAAAATGGTAATTTAGATGGAGCATTGAATACGGCTGATTCGTTTGAACAGTTAGCTGCTCTTGCTGAAGTTCAGTTAAATTCTAATAATATAGGCATGTACGTTTATCTTGATTCCCACCTTGACAA]
[-] EMBL CD066516 [CAAATAGAATGAATCAATCAGATGTAAATAATCCATGGATTTACACAAACCAGCTTTATAATCAACAAAATGGTAATTTAGATGGAGCATTGAATACGGCTGATTCGTTTGAACAGTTAGCTGCTCTTGCTGAAGTTCAGTTAAATTCTAATAATATAGGCATGTACGTTTATCTTGATTCCCACCTTGACAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11028#0 TGATTGGCCCAGCCTGACCTTGGGGATTTTTTGACCTTTGAAGATGAAGGTCGTTCTCCA 60
consensus_11028#1 ------------------------------------------------------------
consensus_11028#0 TAACGTTCTCTCCTGATGGGAAGTTTAGAGGAGTCCAGATTGCCACTGGAGATCAAAACG 120
consensus_11028#1 ------------------------------------------------------------
consensus_11028#0 AAACTAGCAGAGCTTGAAATTGAACTTTCGGAAGGTGATATAACAGAAAAAGGATACCAG 180
consensus_11028#1 ------------------------------------------------------------
consensus_11028#0 AAAAAGAAACAGAAGCTTCTAGCTCCGTTTATTAACGCTCCGATTAACTCAACTAATTCA 240
consensus_11028#1 ------------------------------------------------------------
consensus_11028#0 TCTAATAACTCACATATTCCTTATGGTGGAGTTTTACTTCCTGGACTTAATGAAACGCAT 300
consensus_11028#1 ------------------------------------------------------------
consensus_11028#0 CATTTAGGCCCACGCGGCCAGGCTGTTGGTTGTGGTGATAATGTTACAGAGTCTTTCAGA 360
consensus_11028#1 ------------------------------------------------------------
consensus_11028#0 AACGAGCCCCAAAATAATTCTCCTATTAATGCTCAAAATCGCAGATACATTCGTGAAAAT 420
consensus_11028#1 ------------------------------------------------------------
consensus_11028#0 CATCGATATCGATCGGATATCCGAGAAGAGGCAGTGAAGGAGGCTTTAGTACAAGCTCGG 480
consensus_11028#1 ------------------------------------------------------------
consensus_11028#0 CAGGAACGTCATGATGCTTTGGCACCTAGTAAACGTCGTGACCCCAGTCGTTTGTCCTGT 540
consensus_11028#1 ------------------------------------------------------------
consensus_11028#0 ATACATCAAACTCCTGAACACGATGCAGCATATTCTGATGATTCGGATGAAGATATGTCA 600
consensus_11028#1 ------------------------------------------------------------
consensus_11028#0 TCAACATCTGCACACATTACGCGTTTAGGGAACAATTTTAACCAGTCATCGGGATTAAGT 660
consensus_11028#1 ------------------------------------------------------------
consensus_11028#0 GAAATCCCAAGTTCAAGTGTACCGACAAATGGCGTTTCCGACAGAAATCAACTTAGAACA 720
consensus_11028#1 ------------------------------------------------------------
consensus_11028#0 TCAACTACTATTACTGGTCAGATACACAAACAACAATCCCCTGCTAATCGATATGATGAA 780
consensus_11028#1 ------------------------------------------------------------
consensus_11028#0 GTGCCTTCTTTAGATGAAATTCGATCCTCTCAACCACCGATTCGATCATCAAATAGAATA 840
consensus_11028#1 -------------------------------------------------CAAATAGAATG 11
**********
consensus_11028#0 AATCAATCAGATGTAAATAATCCATGGACTTACACAAACCAGCCTTCTAATCAACAAAAT 900
consensus_11028#1 AATCAATCAGATGTAAATAATCCATGGATTTACACAAACCAGCTTTATAATCAACAAAAT 71
**************************** ************** ** *************
consensus_11028#0 GGTAATTTAGATGGAGCATTGAATACGGCTGATTCGTTTGAACAGTTAGCTGCTCTTGCT 960
consensus_11028#1 GGTAATTTAGATGGAGCATTGAATACGGCTGATTCGTTTGAACAGTTAGCTGCTCTTGCT 131
************************************************************
consensus_11028#0 GAAGCTCAGTTAAATTCTAATAATATAGGGATGTACGATTATCCTGATCCATCAGTTAAT 1020
consensus_11028#1 GAAGTTCAGTTAAATTCTAATAATATAGGCATGTACGTTTATCTTGATTCCCACCTTGAC 191
**** ************************ ******* ***** **** * ** *
consensus_11028#0 ACTAATTTTCATCAATCTCGAGCGATTTCTACAGCTTATCAACCCCAGTCTGGAATCAAT 1080
consensus_11028#1 AA---------------------------------------------------------- 193
*
consensus_11028#0 TCGTGTCCAATATCCATGACTCAGAACGGTCAGCGATCTCATATATTTGGCAGTGTTAGT 1140
consensus_11028#1 ------------------------------------------------------------
consensus_11028#0 GTGCTCCCTAGTTGCCAGTGGTGTTATATCAAATGGTAATTCAGGACATGCAAGTCATGA 1200
consensus_11028#1 ------------------------------------------------------------
consensus_11028#0 ATTCGTTCCTTCATCATCAGCGTATGACTTACAACAAGGTCAACAAGAACAGTATTCTCA 1260
consensus_11028#1 ------------------------------------------------------------
consensus_11028#0 GTCGAACCAGCCGGTCTCACTAGCGTCTTCTTCATCTGCTGATCTTGATAATAGTAATGA 1320
consensus_11028#1 ------------------------------------------------------------
consensus_11028#0 TAGGAAGTTCTCAGCACCAGCAACAGGAGAGTCTATTGGACAAGATCCTTCCTCAGATAC 1380
consensus_11028#1 ------------------------------------------------------------
consensus_11028#0 CAGTCAAACAACAGGCCTGGTATGTCATAATCGTGTATCAGAAAAAATTCAAAAATTAGT 1440
consensus_11028#1 ------------------------------------------------------------
consensus_11028#0 CAACATTTTGAAACGTCCCAAACGATATCCATTACCCGAATATTTTCTTGATGATGAAGA 1500
consensus_11028#1 ------------------------------------------------------------
consensus_11028#0 TCAAGTACTTGTAAGACCTGTTGTTGATCCTACGG 1535
consensus_11028#1 -----------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||