These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11034#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 28 consensus length = 1871 fasta sequence [GTTGCTAGTGGGGTGGGTTTGAGGTTGCGCAGCAAGAATGGTCAGACTCCTTGGTATACATCACATAGGATCAACTATGAAGTCCCTCTCGAGAGGATTGTCAGTTTCTGCTCATCGTCTTAAGGCGGATGTTGTTGTCATTGGGTCGGGTCCGGGTGGCTATGTTGCCTCCATTAAGGCTGCACAGTTGGGCTTGAAGACAGTATGTGTAGAAAAGAACGAAACTTTGGGCGGTACTTGCTTAAATGTTGGTTGTATTCCCAGCAAATCGTTGTTGAATAACTCACATTTATATCAAC-TCGTCAATTCCTCAGAAATGCAACACCGT-GGAATTGATATTGAAAGTTTTAAGCTAAACCTACCTGCTATGTTGAAAGCTAAAGAAAAAGCTGTTTCAAGTCTAACTGGTGGGATAGCATACCTATTTAAACAAAACAAGGTCGATCATGTAAATGGTTTTGGTTCGATTGTTAACCCCAACGAAGTTTTGGTCAAAAAGGCTGACGGAAGTGAAGAACGGATTGCAACTGAACGTATTCTTATTGCAACAGGCAGTGAAGTCACTCCATTCCCTGGGATTGATGTCGATGAACAGTCTGTCGTATCAAGCACTGGCGCATTATCGTTAACTAAGGTCCCTCAACATCTTATAGTTATCGGGGCTGGAGTTATCGGCGTCGAATTAGGTTCTGTATGGAAGCGATTAGGTGCTGAAGTCACTTGTGTGGAGTTCCTTGGTCATGTTGGGGGTATGGGCATCGATATGGAAATAAGCAAGAACTTTCAGAAAATCTTGACTAAG-CAGGGTCTCAA-GTTCCTTTTAAATACTAAAGTTTTGTCAGC-GTCAAAATCTGGTGATACCATTACAGTACAGTTAGAAGGTGTAAAAGATGGCAAATCTCAAAGTATTGATTGTGATACCCTTTTAGTGTGTATAGGAAGGCGTCCTTACACCAGTGGACTTGGTTTAGA-AAATGTGGGAATCAAATTGGACGAGAAAGGTCGAATTCCCGTTAATAAAAACTTTCAGACATCTGTCCCGAATATTTACGCTATCGGTGACTGTATACCTGGTCCGATGTTA-GC-AC-AC-AAAGCT-GAAGATGAAGG-AATAATTTGTGTTGAAGGAATGCTTGATGGTGCTGTACACATAGATTATAACTGTGTTCCTAGTGTTATCTATACTCATCCTGAATGTGCTTGGGTTGGTAAAAATGAAGAACAATGCAAAGCAGAAAACATTCCATACAAAGTAGGCAAATTCCCAATGTCTGCAAATTCACGAGCTAAAACTAATGATGAAACTGATGGACTTTTCAAGGCTTTAGCCCACAAAGATACAGACAGACTTCTTGGAGTACACTTACTTGGTCCATCTGCTGGTGAACTGATTAATGAAGCAGTATTAGCTATGGAGTATGGTGCTTCAGCTGAAGATGTTGCACGTGTCTGTCATGCCCATCCGACGGTGT-CTGAAGCTCTGCGTGAATCTTGTCTCTCTGCATTCTGTGGCAAAGCTATCAATTTCTCATAACATCCAATAGGCAATTAATCAACCTATCGTATATATATAGGTTATTACAATTTAGAAGATGGTTGTTTTTTTACCACATAATACTCTTTTTACTGATAAATTTCATTACAAATGGCTTTTATATCTTAAAGTCAGGGTGGCAACTACTATTCTCATGTGACTTTTCTATAAACACCTCA-TTTTTTCTGTTATTTTTGTTTGTTTGCTTGTCTATCCCTTTCTTTTAACTGATAGTTTATTTGATTAGATTCATTTTCTTTAGCATGTTTGTAAAGCAGAATTTTTTTT-TTTCGAGGAAAAATAAATTAGTTATTATAATGAATGTAAAAAAAAAAAAAAA] [-] EMBL CD156124 [GTTGCTAGTGGGGTGGGTTTGAGGTTGCGCAGCAAGAATGGTCAGACTCCTTGGTATACATCACATAGGATCAACTATGAAGTCCCTCTCGAGAGGATTGTCAGTTTCTGCTCATCGTCTTAAGGCGGATGTTGTTGTCATTGGGTCGGGTCCGGGTGGCTATGTTGCCTCCATTAAGGCTGCACAGTTGGGCTTGAAG ] [+] EMBL AI975594 [ GGGTTTGAGGTTGCGCAGCAAGAATGGTCAGACTCCTTGGTATACATCACATAGGATCAACTATGAAGTCCCTCTCGAGAGGATTGTCAGTTTCTGCTCATCGGCTTAAGGCGGATGTTGTTGTCATTGGGTCGGGTCCGGGTGGCTATGTTGCCTCCATTAAGGCTGCACAGTTGGGCTTGAAGACAGTATGTGTAGAAAAGAACGAAACTTTGGGCGGTACTTGCTTAAATGTTGGATGTATTCCCAGCAAATCGTTGTTGAATAACTCACATTTATATCAAC TCGTCAATTCCTCAGAAATGCAACACCGC GGAATTGATATTGAAAGTTCTAAGCTAAACCTACCTGCTATGTTGAAAGCTAAAGAAAAAGCTGTTTCAAGTCTAACTGGTGGGATAGCATACCTATTTAAACAAAACAAGGTCGATCATGTAAATGGTTTTGGTTCGATTGTTAACCCCAACGA ] [+] EMBL AI976619 [ GGGTTTGAGGTTGCGCAGCAAGAATGGTCAGACTCCTTGGTATACATCACATAGGATCAACTATGAAGTCCCTCTCGAGAGGATTGTCAGTTTCTGCTCATCGTCTTAAGGCGGATGTTGTTGTCATTGGGTCGGGTCCGGGTGGCTATGTTGCCTCCATTAAAGCTGCACAGTTGGGCTTGAAGACAGTATGTGTAGAAAAAAACGAAACTTTGGGCGGCACTTGCTTAAATGTTGGTTGTATTCCCAGCAAATCGTTGTTGAATAACTCACATTTATATCAAC TCGTCAATTCCTCAGAAATGCAACACCGT GGAATTGATATTGAAAGTTTTAAGCTAAACCTACCTGCTATGTTGAAAGCTAAAGAAAAAGCTGCTTCAAGTCTAACTGGTGGGATAGCATACCTATTTAAACAAAACAAGGTCGATCATGTAAATGG ] [+] EMBL CD159440 [ TTTGAGGTTGCGCAGCAAGAATGGCCAGACTCCTTGGTATACATCACATAGGATCAACTATGAAGTCCCTCTCGAGAGGATTGTCAGTTTCTGCTCATCGTCTTAATGCGGATGTTGATGGCATTGGGTCGGCTCCGGCTGGCTATGTTGCCTCCATTAAGGCTGCACAGCTGGGCTTGAAGACAGTGTGTGTAGAAAAGAACGAAACTTTGGGCGGCACTTGCTTAAATGTTGGTTGCATTCCCAGCAAATCGATGTTGAATAACTCACATTTATATCAAC TCGTCAATTCCTCAGAAATGCAACACCGG GGAATTGATATTGAAAGTTCTAAGCTAAACCTACCTGCTATGTTGAAAGCTAAAGAAAAAGCTGCTTC ] [-] EMBL CD127980 [ TTGCGCAGCAAGAATGGTCAGACTCCTTGGTATACATCACATAGGATCAACTATGAAGTCCCTCTCGAGAGGATTGTCAGTTTCTGCTCATCGTCTTAAGGCGGATGTTGTTGTCATTGGGTCGGGTCCGGGTGGCTATGTTGCCTCCATTAAGGCTGCACAGTTGGGCTTGAAGACAGTATGTGTAGAAAAGAACGAAACTTTGGGCGGTACTTGCTTAAATGTTGGTTGTATTCCCAGCAAATCGTTGTTGAATAACTCACATTTATATCAAC TCGTCAATTCCTCAGGGATGCAACACCGT GGAATTGATA AAAAAGTTTTAAGCTAAACCTACtat ] [+] EMBL CD125627 [ CATAGGATCAACTATGAAGTCCCTCTCGAGAGGATTGTCAGTTTCTGCTCATCGTCTTAAGGCGGATGTTGTTGTCATTGGGTCGGGTCCGGGTGGCTATGTTGCCTCCATTAAGGCTGCACAGTTGGGCTTGAAGACAGTATGTGTAGAAAAGAACGAAGCTTTGGGCGGTACTTGCTTAAATGTTGGTTGTATTCCCAGCAAATCGTTGTTGGATAACTCACATTTATATCAACTTTGTCAATTCCTCAGAAATGCAACACCGTGGGAATTGATATCGAAAGTTTTAAGCTAAACCTACCTGCTATGTTGGAGGCTAAAGAAAAAGCTGGTTCAAGTCTAACTGGGGAGATAGCATACCTATTTAAACAAAAC AGGCCGATCATTGAAATGGTTTGGGTTCAATTGT A CCCAAC ] [+] EMBL AI975315 [ GTTTCTGCTCATCGTCTTAAGGCGGATGTTGTTGTCATTGGGTCGGGTCCGGGTGGCTATGTTGCCTCCATTAAGGCTGCACAGTTGGGCTTGAAGACAGTATGTGTAGAAAAGAACGAAACTTTGGGCGGTACTTGCTTAAATGTTGGTTGTATTCCCAGCAAATCGTTGTTGAATAACTCACATTTATATCAAC TCGTCAATTCCTCAGAAATGCAACACCGT GGAATTGATATTGAAAGTTTTAAGCTAAACCTACCTGCTATGTTGAAAGCTAAAGAAAAAGCTGTTTCAAGTCTAACTGGTGGGATAGCATACCTATTTAAACAAAACAAGGTCGATCATGTAAATGGTTTTGGTTCGATTGTTAACCCCAACGAAGTTTTGGTCAAAAAGGCTGACGGAAGTGAAGAACGGATTGCAACTGAACGTATTCTTATTGCAACAGGCAGTGAAGTCACTCCATTCCCTGGGATTGATGTCGATGAACAGTCTGTCGTATCAAGCACTGGCGCATTATCGTTAACTAAGGTCCCTCAACATCTTATAGTTATCGGGGCTGGAGTTATCGGCGTCGAA ] [+] EMBL CD131312 [ TGGGCTTGAAGACAGTATGTGTAGAAAAGAACGAAACTTTGGGCGGTACTTGCTTAAATGTTGGTTGTATTCCCAGCAAATCGTTGTTGAATAACTCACAGTTATATCAAC TCGTCAATTCCTCAGGAATGCAACACCGT GGAATTGATATTGAAAGTTTTAAGCTAAACCTACCTGCTATGTTGAAAGCTAAAGAAAAAGCTGTTTCAAGTCTAACTGGTGGGATAGCATACCTACTTAAACAAAACAAGGTCGATCATGTAAATGGTTTTGGTTCGATTGTTAACCCCAACGA ] [-] EMBL CD184120 [ CTTGAAGACAGTATGTGTAGAAAAGAACGAAACTTTGGGCGGTACTTGCTTAAATGTTGGTTGTATTCCCAGCAAATCGTTGTTGAATAACTCACATTTATATCAAC TCGTCAATTCGTCATAAATGCAACACCGT GGAATTGATATTGAAAGTTTTAAGCTAAACCTACCTGCTATGTTGAAAGCTAAAGAAACAGCTGTTTCAAGTCTAACTGGTGGGATAGCATACCTATTTAAACAAAACAAGGTCGATCATGTAAATGGTTTTGGTTCGATTGTTAACCCCAACGAAGTTTTGGTCAAAAAGGCTGACGGAAGTGAAGAACGGATTGCAACTGAACGTATTC ] [+] EMBL CD096495 [ AGCAAATCGTTGTTGAATAACTCACATTTATATCAAC TCGTCAATTCCTCAGAAATGCAACACCGT GGAATTGATATTGAAAGTTTTAAGCTAAACCTACCTGCTATGTTGAAAGCTAAAGAAAAAGCTGTTTCAAGTCTAACTGGTGGGATAGCATACCTATTTAAACAAAACAAGGTCGATCATGTAAATGGTTTTGGTTCGATTGTTAACCCCAACGAAGTTTTGGTCAAAAAGGCTGACGGAAGTGAAGAACGGATTGCAACTGAACGTATTCTTATTGCAACAGGCAGTGAAGTCACTCCATTCCCTGGGATTGATGTCGATGAACAGTCTGTCGTATCAAGCACTGGCGCATTATCGTTAACTAAGGTCCCTCAACATCTTATAGTTATCGGNGCTGGAGTTATCGGCGTCGAATTAGGTTCTGTATGGAAGCGATTAGGTGCTGAAGTCACTTGTGTGGAGTTCCTTGGTCATGTTGGGGGTATGGGCATCG ] [+] EMBL CD096447 [ AGCAAATCGTTGTTGAATAACTCACATTTATATCAAC TCGTCAATTCCTCAGAAATGCAACACCGT GGAATTGATATTGAAGGTTTTAAGCTAAACCTACCTGCTATGTTGAAAGCTAAAGAAAAAGCTGTTTCAAGTCTAACTGGTGGGATAGCATACCTATTTAAACAAAACAAGGTCGATCATGTAAATGGTTTTGGTTCGATTGTTAACCCCAACGAAGTTTTGGTCAAAAAGGCTGACGGAAGTGAAGAACGGATTGCAACTGAACGTATTCTTATTGCAACAGGCAGTGAAGTCACTCCATTCCCTGGGATTGATGTCGATGAACAGTCTGTCGTATCAAGCACTGGCGCATTATCGTTAACTAAGGTCCCTCAACATCTTATAGTTATCGGGGCTGGAGTTATCGGCGTCGAATTAGGTTCTGTATGGAAGCGATTAGGTGCTGAAGTCACTTGTGTGGAGTTCCTTGGTCATGTTGGGGGTATGGGCATCGATATGGAAATAAGCAAGAACTTTCAGAANATCTTGACTAAG CAGGNTCTCAA GTTCCTTTTAAATACT ] [+] EMBL CD155315 [ TCATGTAAATGGTTTTGGTTCGATTGTTAACCCCAACGAAGTTTTGGTCAAAAAGGCTGACGGAAGTGAAGAACGGATTGCAACTGAACGTATTCTTATTGCAACAGGCAGTGAAGTCACTCCATTCCCTGGGATTGATGTCGATGAACAGTCTGTCGTATCAAGCACTGGCGCATTATCGTTAACTAAGGTCCCTCAACATCTTATAGTTATCGGGGCTGGAGTTATCGGCGTCGAATTAGGTTCTGTATGGAAGCGATTAGGTGCTGAAGTCACTTGTGTGGAGTTCCTTGGTCATGTTGGGGGTATGGGCATCGATATGGAAATAAGCAAGAACTTTCAGAAAATCTTGACTAAG CAGGGTCTCAA GTTCCTTTTAAATACTAAAGTTTTGTCAGCGGTC AAATCTGGTGATACCATTACAGTACAGTTAGAAGG ] [-] EMBL CD128797 [ AATTAGGTTCTGTATGGAAGCGATTAGGTGCTGAAGTCACTTGTGTGGAGTTCCTTGGTCATGTTGGGGGTATGGGCATCGATATGGAAATAAGCAAGAACTTTCAGAAAATCTTGACTAAG CAGGGTCTCAA GTTCCTTTTAAATACTAAAGTTTTGTCAGC GTCAAAATCTGGTGATACCATTACAGTACAGTTAGAAGGTGTAAAAGATGGCAAATCTCAAAGTATTGATTGTGATACCCTTTTAGTGTGTATAGGAAGGCGTCCTTACACCAGTGGACTTGGTTTAGA AAATGTGGGAATCAAATTGGACGAGAAAGGTCGAATTCCCGTTAATAAAAACTTACAGACATCTGTCCCGAATATTTACGCTATCGGTGACTGTATACCTGGTCCGATGTTA GC AC AC AAAGCT GAAGATGAAGG AATAATTTGTGTTGAA ] [+] EMBL CD193371 [ GGAAATAAGCAAGAACTTTCAGAAAATCTTGACTAAG CAGGGTCTCAA GTTCCTTTTAAATACTAAAGTTTTGTCAGC GTCAAAATCTGGTGATACCATTACAGTACAGTTAGAAGGTGTAAAAGATGGCAAATCTCAAAGTATTGATTGTGATACCCTTTTAGTGTGTATAGGAAGGCG ] [+] EMBL CD144881 [ TCAGAAAATCTTGACTAAG CAGGGTCTCAA GTTCCTTTTAAATACTAAAGTTTTGTCAGC GTCAAAATCTGGTGATACCATTACAGTACAGTTAGAAGGTGTAAAAGATGGCAAATCTCAAAGTATTGATTGTGATACCCTTTTAGTGTGTATAGGAAGGCGTCCTTACACCAGTGGACTTGGTTTAGA AAATGTGGGAATCAAATTGGACGAGAAAGGTCGAATTCCCGTTAATAAAAACTTTCAGACATCTGTCCCGAATATTTACGCTATCGGTGACTGTATACCTGGTCCGATGTTA GC AC AC AAAGCT GAAGATGAAGG AATAATTTGTGTTGAAGGAATGCTTGGTGGTGCTGTACACATAGATTATAACTGTGTTCCTAGTGTTATCTATA ] [-] EMBL CD123430 [ GAAAATCTTGACTAAG CAGGGTCTCAA GTTCCTTTTAAATACTAAAGTTTTGTCAGC GTCAAAATCTGGTGATACCATTACAGTACAGTTAGAAGGTGTAAAAGATGGCAAATCTCAAAGTATTGATTGTGATACCCTTTTAGTGTGTATAGGAAGGCGTCCTTACACCAGTGGACTTGGTTTAGA AAATGTGGGAATCAAATTGGACGAGAAAGGTCGAATTCCCGTTAATAAAAACTTTCAGACATCTGTCCCGAATATTTACGCTATCGGTGACTGTATACCTGGTCCGATGTTA GC AC AC AAAGCT GAAGATGAAGG AATAATTTGTGTTGAAGGAATGCTTGATGGTGCTGTACACATAGATTATAACTGTGTTCCTAGTGTTATCTATACTCATCCTGAATGTGCTTGGGTTGGTAAAAATGAAGAACAATGCAAAGCAGAAAACATTCCATACAAAGTAGGCAAATTCCCAATGTCTGCAAATTCACGAGC ] [-] EMBL CD123441 [ GAAAATCTTGACTAAG CAGGGTCTCAA GTTCCTTTTAAATACTAAAGTTTTGTCAGC GTCAAAATCTGGTGATACCATTACAGTACAGTTAGAAGGTGTAAAAGATGGCAAATCTCAAAGTATTGATTGTGATACCCTTTTAGTGTGTATAGGAAGGCGTCCTTACACCAGTGGACTTGGTTTAGA AAATGTGGGAATCAAATTGGACGAGAAAGGTCGAATTCCCGTTAATAAAAACTTTCAGACATCTGTCCCGAATATTTACGCTATCGGTGACTGAATACCTGGTCCGATGTTA GC AC AC AAAGCT GAAGATGAAGG AATAATTTGTGTTGAAGGAATGCTTGATGGTGCTGTACACATAGATTATAACTGTGTTCCTAGTGTTATCTATACTCATCCTGAATGTGCTTGGGTTGGTAAAAATGAAGAACAATGCAAAGCAGAAAACATTCCATACAAAGTAGGCAAATTCCCAATGTCTGCAAGTTCACGAGC ] [+] EMBL CD114826 [ TTGACTAAGACAGGGTCTCAATGTTCCTTTTAAATACTAAAGTTTTGTCAGC GTCGAAATCTGGAGATACCTTTACAGTACAGTTAGAAGGTGTAAAAGATGGCAAATCTCAAAGTATTGATTGTGATACCCTTTTAGTGTGTATAGGAAGGCGTCCTTACACCAGTGGACTTGGTTTAGA AAATGTGGGAATCAAATTGGACGAGAAAGGTCGAATTCCCGTTAATAAAAACTTTCAGACATCTGTCCCGAATATTTACGCTATCGGTGACTGTATACCTGGTCCGATGTTAGGCAACAACAAAAGGTGGAAGATGAAGGAAATAATTTGTGTTGAAGGAATGCTTGATGGTGCTGTACACATAGATTATAACTGTGTTCCTAGTGTTATCTATA ] [-] EMBL CD113556 [ CTTACACCAGTGGACTTGG TTAGACAAATGTGCGAATCAAATTGCACGAGAAAGGTCGCATTCCCGTTAATAAACACTTTCAGACATCTGTCCCGAATATTTACGCTATCGGTGACTGTATACCTGGTCCGATGATA GC AC TC ACAGCT GAAGATGAAGG AATAATTTGTGTTGAAGGAATGCTTGATGGTGCTGTACACATAGACTATAACTGTGTTCTTAGTGTCATCTATAGTCATCGTTAATGTGCTTGGGTTGGTAAAAATGAAGCACAATGCGTAGCAGAAAACATTCCATACAAAGTAGGCAAATTCCCAATGTCTGCAAATTCACGAGCTAAAATTAATGATGCAACTGATGGACTTTTCAAGGCTTTAGCCCCCAAAGATACAGACAGACTTCTTGGAGTACACTTACTTGGTCCATCTGCTGGTGGACTGATTAACGAAGCAGTATTAGCTATGGAGTATAGTGCTTCAGCTGAAGATGTTGCACGTGTCTGTCATGCCCATCCGACGGTGTCCTGAAGCTCTGCGTGAATCTTGTCT ] [-] EMBL CD077031 [ ATGTGCTTGGGTTGGTAAAAATGAAGAACAATGCAAAGCAGAAAACATTCCATACAAAGTAGGCAAATTCCCAATGTCTGCAAATTCACGAGCTAAAACTAATGATGAAACTGATGGACTTTTCAAGGCTTTAGCCCACAAAGATACAGACAGACTTCTTGGAGTACACTTACTTGGTCCATCTGCTGGTGAACTGATTAATGAAGCAGTATTAGCTATGGAGTATGGTGCTTCAGCTGAAGATGTTGCACGTGTCTGTCATGCCCATCCGACGGTGT TTGAAGCTCTGCGTGAATCTTGTCTCTCTGCATTCTGTGGCAAAGCTATCAATTTTTCATAACATCCAATAGGCAATTAATCAACCTATCGTATATATATAGGTTATTACAATTTAGAAGATGGTTGTTTTTTTACCACATAATACTCTTTTTACTGATAAATTTCATTACAAATGGCTTTTATATTTTAAAGTCAGGGTGGCAACTACTATTTTCATGTGACTTTTCTATAAACACCTCATTTTTTTCTGTTATTTTTGTTTGTTTGCTTGTCTATCCCTTTCTTTTAACTGATAGTTTATTTGATTAGATTCATTTTCTTTAGCATGTTTGTAAAGCAGAATTTTTTTT TTTCGAGGAAAAATAAATTAGTT ] [+] EMBL CD122938 [ AAGAACAATGCAAAGCAGAAAACATTCCATACAAAGTAGGCAAATTCCCAATGTCTGCAAATTCACGAGCTAAAACTAATGATGAAACTGATGGACTTTTCAAGGCTTTAGCCCACAAAGATACAGACAGACTTCTTGGAGTACACTTACTTGGTCCATCTGCTGGTGAACTGATTAATGAAGCAGTATTAGCTATGGAGTATGGTGCTTCAGCTGAAGATGTTGCACGTGTCTGTCATGCCCATCCGACGGTGT CTGAAGCTCTGCGTGAATCTTGTCTCTCTGCATTCTGTGGCAAAGCTATCAA ] [-] EMBL CD179552 [ AGAACAATGCAAAGCAGAAAACATTCCATACAAAGTAGGCAAATTCCCAATGTCTGCAAATTCACGAGCTAAAACTAATGATGAAACTGATGGACTTTTCAAGGCTTTAGCCCACAAAGATACAGACAGACTTCTTGGAGTACACTTACTTGGTCCATCTGCTGGTGAACTGATTAATGAAGCAGTATTAGCTATGGAGTATGGTGCTTCAGCTGAAGATGTTGCACGTGTCTGTCATGCCCATCCGACGGTGT CTGAAGCTCTGCGTGAATCTTGTCTCTCTGCATTCTGTGGCAAAGCTATCAAT ] [-] EMBL AI067588 [ TGGAGTATGGTGCTTCAGCTGAAGATGTTGCACGTGTCTGTCATGCCCATCCGACGGTGT CTGAAGCTCTGCGTGAATCTTGTCTCTCTGCATTCTGTGGCAAAGCTATCAATTTCTCATAACATCCAATAGGCAATTAATCAACCTATCGTATATATATAGGTTATTACAATTTAGAAGATGGTTGTTTTTTTACCACATAATACTCTTTTTACTGATAAATTTCATTACAAATGGCTTTTATATCTTAAAGTCAGGGTGGCAACTACTATTCTCATGTGACTTTTCTATAAACACCTCA TTTTTTCTGTTATTTTTGTTTGTTTGCTTGTCTATCCCTTTCTTTTAACTGATAGTTTATTTGATTAGATTCATTTTCTTTAGCATGTTTGTAAAGCAGAATTTTCTT ] [-] EMBL CD076937 [ CCGACGGTGT TTGAAACTCTGCGTGAATCTTGTCTCTCTGCATTCTGTGGCAAAACTATCAATTTTTCATAACATCCAATAGGCAATTAATCAACCTATCGTATATATATAGGTTATTACAATTTAAAAAATGGTTGTTTTTTTACCACATAATACTCTTTTTACTGATAAATTTCATTACAAATGGCTTTTATATTTTAAAATCAGGGTGGCAACTACTATTTTCATGTGACTTTTCTATAAACACCTCA TTTTTTCTGTTATTTTTGTTTGTTTGCTTGTCTATCCCTTTCTTTTAACTGATAGTTTATTTGATTAAATTCATTTTCTTTAGCATGTTTGTAAAACAAAATTTTTTTTCTTTCGAGGAAAAATAAAGGAGTT ] [+] EMBL CD143457 [ TGCGTGAATCTTGTCTCTCTGCATTCTGTGGCAAAGCTATCAATTTCTCATAACATCCAATAGGCAATTAATCAACCTATCGTATATATATAGGTTATTACAGTTTAGAAGATGGTTGTTTTTTTACCACATAATACTCTTTTTACTGATAAATTTCATTACAAATGGCTTTTATATCTTAAAGTCAGGGTGGCAACTACTATTCTCATGTGAC ] [+] EMBL CD143447 [ TGCGTGAATCTTGTCTCTCTGCATTCTGTGGCAAAGCTATCAATTTCTCATAACATCCAATAGGCAATTAATCAACCTATCGTATATATATAGGTTATTACAATTTAGAAGATGGTTGTTTTTTTACCACATAATACTCTTTTTACTGATAAATTTCATTACAAATGGCTTTTATATCTTAAAGTCAGGGTGGCAACTACTATTCTCATGTGAC ] [-] EMBL CD143479 [ GCGTGAATCTTGTCTCTCTGCATTCTGTGGCAAAGCTATCAATTTCTCATAACATCCAATAGGCAATTAATCAACCTATCGTATATATATAGGTTATTACAATTTAGAAGATGGTTGTTTTTTTACCACATAATACTCTTTTTACTGATAAATTTCATTACAAATGGCTTTTATATCTTAAAGTCAGGGTGGCAACTACTATTCTCATGTGACT ] [-] EMBL AI394779 [ ATTCNGTGGCAAAGCTATCAATTTCTCATAACATCCAATAGGCAATTAATCAACCTATCGTATATATATAGGTTATTACAATTTAGAAGATGGTTGTTTTTTTACCACATAATACTCTTTTTACTGATAAATTTCATTACAAATGGCTTTTATATCTTAAAGTCAGGGTGGCAACTACTATTCTCATGTGACTTTTCTATAAACACCTCA TTTTTTCTGTTATTTTTGTTTGTTTGCTTGTCTATCCCTTTCTTTTAACTGATAGTTTATTTGATTAGATTCATTTTCTTTAGCATGTTTGTAAAGCAGAATTTTCTTC TTTCGAGGAAAAATAAATTAGTTATTATAATGAATGTAAAAAAAAAAAAAAA] consensusID : consensus_11034#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 501 fasta sequence [GATAATCTTGCCTAAGCAGGGTCTCAAGTTCCTTTTAAATACTACAGTTTTGTCAGCGTCAAAATATGGTGATACCATTACAGTACAGTTAGAAGGTGTAAAAGATGGCAAATCTCAAAGTATTGATTGTGATACCCTTTTAGTGTGTATAGGAAGGCGTCGTTACACCAGTGGTCTGGTTTAGTCAATGTGGGGCCCTCATTGGACGAAAAAGGTAGAAGTCCCGCTAATAAGTAAGGTCAGTCATATGTCGTGACTATAAGCGCTATGGGTTCCGGTATAATTGGTTCGACGGTAGCACTTATAGCTGAAGATGAAGGAATAATCTGTGTTGAAGGGAGGGCTGATCGTGCAGTGCTCATAGATGTATAACGTGTGTTCACACGTGTTATGTATAGCTCATCATGAATGTGTATGGGTCGGTAACAATGAAGACCAATGCAAAGCAGAACACATTCCATACGAAGTAGGCAAATTCGCAATTTCTGATGATTCTCGACC] [-] EMBL CD123420 [GATAATCTTGCCTAAGCAGGGTCTCAAGTTCCTTTTAAATACTACAGTTTTGTCAGCGTCAAAATATGGTGATACCATTACAGTACAGTTAGAAGGTGTAAAAGATGGCAAATCTCAAAGTATTGATTGTGATACCCTTTTAGTGTGTATAGGAAGGCGTCGTTACACCAGTGGTCTGGTTTAGTCAATGTGGGGCCCTCATTGGACGAAAAAGGTAGAAGTCCCGCTAATAAGTAAGGTCAGTCATATGTCGTGACTATAAGCGCTATGGGTTCCGGTATAATTGGTTCGACGGTAGCACTTATAGCTGAAGATGAAGGAATAATCTGTGTTGAAGGGAGGGCTGATCGTGCAGTGCTCATAGATGTATAACGTGTGTTCACACGTGTTATGTATAGCTCATCATGAATGTGTATGGGTCGGTAACAATGAAGACCAATGCAAAGCAGAACACATTCCATACGAAGTAGGCAAATTCGCAATTTCTGATGATTCTCGACC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11034#0 GTTGCTAGTGGGGTGGGTTTGAGGTTGCGCAGCAAGAATGGTCAGACTCCTTGGTATACA 60 consensus_11034#1 ------------------------------------------------------------ consensus_11034#0 TCACATAGGATCAACTATGAAGTCCCTCTCGAGAGGATTGTCAGTTTCTGCTCATCGTCT 120 consensus_11034#1 ------------------------------------------------------------ consensus_11034#0 TAAGGCGGATGTTGTTGTCATTGGGTCGGGTCCGGGTGGCTATGTTGCCTCCATTAAGGC 180 consensus_11034#1 ------------------------------------------------------------ consensus_11034#0 TGCACAGTTGGGCTTGAAGACAGTATGTGTAGAAAAGAACGAAACTTTGGGCGGTACTTG 240 consensus_11034#1 ------------------------------------------------------------ consensus_11034#0 CTTAAATGTTGGTTGTATTCCCAGCAAATCGTTGTTGAATAACTCACATTTATATCAACT 300 consensus_11034#1 ------------------------------------------------------------ consensus_11034#0 CGTCAATTCCTCAGAAATGCAACACCGTGGAATTGATATTGAAAGTTTTAAGCTAAACCT 360 consensus_11034#1 ------------------------------------------------------------ consensus_11034#0 ACCTGCTATGTTGAAAGCTAAAGAAAAAGCTGTTTCAAGTCTAACTGGTGGGATAGCATA 420 consensus_11034#1 ------------------------------------------------------------ consensus_11034#0 CCTATTTAAACAAAACAAGGTCGATCATGTAAATGGTTTTGGTTCGATTGTTAACCCCAA 480 consensus_11034#1 ------------------------------------------------------------ consensus_11034#0 CGAAGTTTTGGTCAAAAAGGCTGACGGAAGTGAAGAACGGATTGCAACTGAACGTATTCT 540 consensus_11034#1 ------------------------------------------------------------ consensus_11034#0 TATTGCAACAGGCAGTGAAGTCACTCCATTCCCTGGGATTGATGTCGATGAACAGTCTGT 600 consensus_11034#1 ------------------------------------------------------------ consensus_11034#0 CGTATCAAGCACTGGCGCATTATCGTTAACTAAGGTCCCTCAACATCTTATAGTTATCGG 660 consensus_11034#1 ------------------------------------------------------------ consensus_11034#0 GGCTGGAGTTATCGGCGTCGAATTAGGTTCTGTATGGAAGCGATTAGGTGCTGAAGTCAC 720 consensus_11034#1 ------------------------------------------------------------ consensus_11034#0 TTGTGTGGAGTTCCTTGGTCATGTTGGGGGTATGGGCATCGATATGGAAATAAGCAAGAA 780 consensus_11034#1 ------------------------------------------------------------ consensus_11034#0 CTTTCAGAAAATCTTGACTAAGCAGGGTCTCAAGTTCCTTTTAAATACTAAAGTTTTGTC 840 consensus_11034#1 ------GATAATCTTGCCTAAGCAGGGTCTCAAGTTCCTTTTAAATACTACAGTTTTGTC 54 ** ******* ********************************* ********* consensus_11034#0 AGCGTCAAAATCTGGTGATACCATTACAGTACAGTTAGAAGGTGTAAAAGATGGCAAATC 900 consensus_11034#1 AGCGTCAAAATATGGTGATACCATTACAGTACAGTTAGAAGGTGTAAAAGATGGCAAATC 114 *********** ************************************************ consensus_11034#0 TCAAAGTATTGATTGTGATACCCTTTTAGTGTGTATAGGAAGGCGTCCTTACACCAGTGG 960 consensus_11034#1 TCAAAGTATTGATTGTGATACCCTTTTAGTGTGTATAGGAAGGCGTCGTTACACCAGTGG 174 *********************************************** ************ consensus_11034#0 ACTTGGTTTAGAAAATGTGGGAATCAAATTGGACGAGAAAGGTCGAATTCCCGTTAATAA 1020 consensus_11034#1 TCT-GGTTTAGTCAATGTGGGGCCCTCATTGGACGAAAAAGGTAGAAGTCCCGCTAATAA 233 ** ******* ******** * ********* ****** *** ***** ****** consensus_11034#0 AAACTTTCAGACATCTGTCCCGAATATTTACGCTATCGGTGACTGTATACCTGGTCCGAT 1080 consensus_11034#1 GTAAGGTCAGTCATATGTCGTGACTATAAGCGCTATGGGTTCCGGTATAATTGGTTCGAC 293 * **** *** **** ** *** ****** *** * ***** **** *** consensus_11034#0 GTTAGCACACAAAGCTGAAGATGAAGGAATAATTTGTGTTGAAGGAATGCTTGATGGTGC 1140 consensus_11034#1 GGTAGCACTTATAGCTGAAGATGAAGGAATAATCTGTGTTGAAGGGAGGGCTGATCGTGC 353 * ****** * ********************* *********** * * **** **** consensus_11034#0 TGTACACATAGAT-TATAAC-TGTGTTCCTA-GTGTTATCTATA-CTCATCCTGAATGTG 1196 consensus_11034#1 AGTGCTCATAGATGTATAACGTGTGTTCACACGTGTTATGTATAGCTCATCATGAATGTG 413 ** * ******* ****** ******* * ******* **** ****** ******** consensus_11034#0 CTTGGGTTGGTAAAAATGAAGAACAATGCAAAGCAGAAAACATTCCATACAAAGTAGGCA 1256 consensus_11034#1 TATGGGTCGGTAACAATGAAGACCAATGCAAAGCAGAACACATTCCATACGAAGTAGGCA 473 ***** ***** ******** *************** *********** ********* consensus_11034#0 AATTCCCAATGTCTGCAAATTCACGAGCTAAAACTAATGATGAAACTGATGGACTTTTCA 1316 consensus_11034#1 AATTCGCAATTTCTGATGATTCTCGACC-------------------------------- 501 ***** **** **** **** *** * consensus_11034#0 AGGCTTTAGCCCACAAAGATACAGACAGACTTCTTGGAGTACACTTACTTGGTCCATCTG 1376 consensus_11034#1 ------------------------------------------------------------ consensus_11034#0 CTGGTGAACTGATTAATGAAGCAGTATTAGCTATGGAGTATGGTGCTTCAGCTGAAGATG 1436 consensus_11034#1 ------------------------------------------------------------ consensus_11034#0 TTGCACGTGTCTGTCATGCCCATCCGACGGTGTCTGAAGCTCTGCGTGAATCTTGTCTCT 1496 consensus_11034#1 ------------------------------------------------------------ consensus_11034#0 CTGCATTCTGTGGCAAAGCTATCAATTTCTCATAACATCCAATAGGCAATTAATCAACCT 1556 consensus_11034#1 ------------------------------------------------------------ consensus_11034#0 ATCGTATATATATAGGTTATTACAATTTAGAAGATGGTTGTTTTTTTACCACATAATACT 1616 consensus_11034#1 ------------------------------------------------------------ consensus_11034#0 CTTTTTACTGATAAATTTCATTACAAATGGCTTTTATATCTTAAAGTCAGGGTGGCAACT 1676 consensus_11034#1 ------------------------------------------------------------ consensus_11034#0 ACTATTCTCATGTGACTTTTCTATAAACACCTCATTTTTTCTGTTATTTTTGTTTGTTTG 1736 consensus_11034#1 ------------------------------------------------------------ consensus_11034#0 CTTGTCTATCCCTTTCTTTTAACTGATAGTTTATTTGATTAGATTCATTTTCTTTAGCAT 1796 consensus_11034#1 ------------------------------------------------------------ consensus_11034#0 GTTTGTAAAGCAGAATTTTTTTTTTTCGAGGAAAAATAAATTAGTTATTATAATGAATGT 1856 consensus_11034#1 ------------------------------------------------------------ consensus_11034#0 AAAAAAAAAAAAAAA 1871 consensus_11034#1 --------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||