|
These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11034#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 28 consensus length = 1871 fasta sequence
[GTTGCTAGTGGGGTGGGTTTGAGGTTGCGCAGCAAGAATGGTCAGACTCCTTGGTATACATCACATAGGATCAACTATGAAGTCCCTCTCGAGAGGATTGTCAGTTTCTGCTCATCGTCTTAAGGCGGATGTTGTTGTCATTGGGTCGGGTCCGGGTGGCTATGTTGCCTCCATTAAGGCTGCACAGTTGGGCTTGAAGACAGTATGTGTAGAAAAGAACGAAACTTTGGGCGGTACTTGCTTAAATGTTGGTTGTATTCCCAGCAAATCGTTGTTGAATAACTCACATTTATATCAAC-TCGTCAATTCCTCAGAAATGCAACACCGT-GGAATTGATATTGAAAGTTTTAAGCTAAACCTACCTGCTATGTTGAAAGCTAAAGAAAAAGCTGTTTCAAGTCTAACTGGTGGGATAGCATACCTATTTAAACAAAACAAGGTCGATCATGTAAATGGTTTTGGTTCGATTGTTAACCCCAACGAAGTTTTGGTCAAAAAGGCTGACGGAAGTGAAGAACGGATTGCAACTGAACGTATTCTTATTGCAACAGGCAGTGAAGTCACTCCATTCCCTGGGATTGATGTCGATGAACAGTCTGTCGTATCAAGCACTGGCGCATTATCGTTAACTAAGGTCCCTCAACATCTTATAGTTATCGGGGCTGGAGTTATCGGCGTCGAATTAGGTTCTGTATGGAAGCGATTAGGTGCTGAAGTCACTTGTGTGGAGTTCCTTGGTCATGTTGGGGGTATGGGCATCGATATGGAAATAAGCAAGAACTTTCAGAAAATCTTGACTAAG-CAGGGTCTCAA-GTTCCTTTTAAATACTAAAGTTTTGTCAGC-GTCAAAATCTGGTGATACCATTACAGTACAGTTAGAAGGTGTAAAAGATGGCAAATCTCAAAGTATTGATTGTGATACCCTTTTAGTGTGTATAGGAAGGCGTCCTTACACCAGTGGACTTGGTTTAGA-AAATGTGGGAATCAAATTGGACGAGAAAGGTCGAATTCCCGTTAATAAAAACTTTCAGACATCTGTCCCGAATATTTACGCTATCGGTGACTGTATACCTGGTCCGATGTTA-GC-AC-AC-AAAGCT-GAAGATGAAGG-AATAATTTGTGTTGAAGGAATGCTTGATGGTGCTGTACACATAGATTATAACTGTGTTCCTAGTGTTATCTATACTCATCCTGAATGTGCTTGGGTTGGTAAAAATGAAGAACAATGCAAAGCAGAAAACATTCCATACAAAGTAGGCAAATTCCCAATGTCTGCAAATTCACGAGCTAAAACTAATGATGAAACTGATGGACTTTTCAAGGCTTTAGCCCACAAAGATACAGACAGACTTCTTGGAGTACACTTACTTGGTCCATCTGCTGGTGAACTGATTAATGAAGCAGTATTAGCTATGGAGTATGGTGCTTCAGCTGAAGATGTTGCACGTGTCTGTCATGCCCATCCGACGGTGT-CTGAAGCTCTGCGTGAATCTTGTCTCTCTGCATTCTGTGGCAAAGCTATCAATTTCTCATAACATCCAATAGGCAATTAATCAACCTATCGTATATATATAGGTTATTACAATTTAGAAGATGGTTGTTTTTTTACCACATAATACTCTTTTTACTGATAAATTTCATTACAAATGGCTTTTATATCTTAAAGTCAGGGTGGCAACTACTATTCTCATGTGACTTTTCTATAAACACCTCA-TTTTTTCTGTTATTTTTGTTTGTTTGCTTGTCTATCCCTTTCTTTTAACTGATAGTTTATTTGATTAGATTCATTTTCTTTAGCATGTTTGTAAAGCAGAATTTTTTTT-TTTCGAGGAAAAATAAATTAGTTATTATAATGAATGTAAAAAAAAAAAAAAA]
[-] EMBL CD156124 [GTTGCTAGTGGGGTGGGTTTGAGGTTGCGCAGCAAGAATGGTCAGACTCCTTGGTATACATCACATAGGATCAACTATGAAGTCCCTCTCGAGAGGATTGTCAGTTTCTGCTCATCGTCTTAAGGCGGATGTTGTTGTCATTGGGTCGGGTCCGGGTGGCTATGTTGCCTCCATTAAGGCTGCACAGTTGGGCTTGAAG ]
[+] EMBL AI975594 [ GGGTTTGAGGTTGCGCAGCAAGAATGGTCAGACTCCTTGGTATACATCACATAGGATCAACTATGAAGTCCCTCTCGAGAGGATTGTCAGTTTCTGCTCATCGGCTTAAGGCGGATGTTGTTGTCATTGGGTCGGGTCCGGGTGGCTATGTTGCCTCCATTAAGGCTGCACAGTTGGGCTTGAAGACAGTATGTGTAGAAAAGAACGAAACTTTGGGCGGTACTTGCTTAAATGTTGGATGTATTCCCAGCAAATCGTTGTTGAATAACTCACATTTATATCAAC TCGTCAATTCCTCAGAAATGCAACACCGC GGAATTGATATTGAAAGTTCTAAGCTAAACCTACCTGCTATGTTGAAAGCTAAAGAAAAAGCTGTTTCAAGTCTAACTGGTGGGATAGCATACCTATTTAAACAAAACAAGGTCGATCATGTAAATGGTTTTGGTTCGATTGTTAACCCCAACGA ]
[+] EMBL AI976619 [ GGGTTTGAGGTTGCGCAGCAAGAATGGTCAGACTCCTTGGTATACATCACATAGGATCAACTATGAAGTCCCTCTCGAGAGGATTGTCAGTTTCTGCTCATCGTCTTAAGGCGGATGTTGTTGTCATTGGGTCGGGTCCGGGTGGCTATGTTGCCTCCATTAAAGCTGCACAGTTGGGCTTGAAGACAGTATGTGTAGAAAAAAACGAAACTTTGGGCGGCACTTGCTTAAATGTTGGTTGTATTCCCAGCAAATCGTTGTTGAATAACTCACATTTATATCAAC TCGTCAATTCCTCAGAAATGCAACACCGT GGAATTGATATTGAAAGTTTTAAGCTAAACCTACCTGCTATGTTGAAAGCTAAAGAAAAAGCTGCTTCAAGTCTAACTGGTGGGATAGCATACCTATTTAAACAAAACAAGGTCGATCATGTAAATGG ]
[+] EMBL CD159440 [ TTTGAGGTTGCGCAGCAAGAATGGCCAGACTCCTTGGTATACATCACATAGGATCAACTATGAAGTCCCTCTCGAGAGGATTGTCAGTTTCTGCTCATCGTCTTAATGCGGATGTTGATGGCATTGGGTCGGCTCCGGCTGGCTATGTTGCCTCCATTAAGGCTGCACAGCTGGGCTTGAAGACAGTGTGTGTAGAAAAGAACGAAACTTTGGGCGGCACTTGCTTAAATGTTGGTTGCATTCCCAGCAAATCGATGTTGAATAACTCACATTTATATCAAC TCGTCAATTCCTCAGAAATGCAACACCGG GGAATTGATATTGAAAGTTCTAAGCTAAACCTACCTGCTATGTTGAAAGCTAAAGAAAAAGCTGCTTC ]
[-] EMBL CD127980 [ TTGCGCAGCAAGAATGGTCAGACTCCTTGGTATACATCACATAGGATCAACTATGAAGTCCCTCTCGAGAGGATTGTCAGTTTCTGCTCATCGTCTTAAGGCGGATGTTGTTGTCATTGGGTCGGGTCCGGGTGGCTATGTTGCCTCCATTAAGGCTGCACAGTTGGGCTTGAAGACAGTATGTGTAGAAAAGAACGAAACTTTGGGCGGTACTTGCTTAAATGTTGGTTGTATTCCCAGCAAATCGTTGTTGAATAACTCACATTTATATCAAC TCGTCAATTCCTCAGGGATGCAACACCGT GGAATTGATA AAAAAGTTTTAAGCTAAACCTACtat ]
[+] EMBL CD125627 [ CATAGGATCAACTATGAAGTCCCTCTCGAGAGGATTGTCAGTTTCTGCTCATCGTCTTAAGGCGGATGTTGTTGTCATTGGGTCGGGTCCGGGTGGCTATGTTGCCTCCATTAAGGCTGCACAGTTGGGCTTGAAGACAGTATGTGTAGAAAAGAACGAAGCTTTGGGCGGTACTTGCTTAAATGTTGGTTGTATTCCCAGCAAATCGTTGTTGGATAACTCACATTTATATCAACTTTGTCAATTCCTCAGAAATGCAACACCGTGGGAATTGATATCGAAAGTTTTAAGCTAAACCTACCTGCTATGTTGGAGGCTAAAGAAAAAGCTGGTTCAAGTCTAACTGGGGAGATAGCATACCTATTTAAACAAAAC AGGCCGATCATTGAAATGGTTTGGGTTCAATTGT A CCCAAC ]
[+] EMBL AI975315 [ GTTTCTGCTCATCGTCTTAAGGCGGATGTTGTTGTCATTGGGTCGGGTCCGGGTGGCTATGTTGCCTCCATTAAGGCTGCACAGTTGGGCTTGAAGACAGTATGTGTAGAAAAGAACGAAACTTTGGGCGGTACTTGCTTAAATGTTGGTTGTATTCCCAGCAAATCGTTGTTGAATAACTCACATTTATATCAAC TCGTCAATTCCTCAGAAATGCAACACCGT GGAATTGATATTGAAAGTTTTAAGCTAAACCTACCTGCTATGTTGAAAGCTAAAGAAAAAGCTGTTTCAAGTCTAACTGGTGGGATAGCATACCTATTTAAACAAAACAAGGTCGATCATGTAAATGGTTTTGGTTCGATTGTTAACCCCAACGAAGTTTTGGTCAAAAAGGCTGACGGAAGTGAAGAACGGATTGCAACTGAACGTATTCTTATTGCAACAGGCAGTGAAGTCACTCCATTCCCTGGGATTGATGTCGATGAACAGTCTGTCGTATCAAGCACTGGCGCATTATCGTTAACTAAGGTCCCTCAACATCTTATAGTTATCGGGGCTGGAGTTATCGGCGTCGAA ]
[+] EMBL CD131312 [ TGGGCTTGAAGACAGTATGTGTAGAAAAGAACGAAACTTTGGGCGGTACTTGCTTAAATGTTGGTTGTATTCCCAGCAAATCGTTGTTGAATAACTCACAGTTATATCAAC TCGTCAATTCCTCAGGAATGCAACACCGT GGAATTGATATTGAAAGTTTTAAGCTAAACCTACCTGCTATGTTGAAAGCTAAAGAAAAAGCTGTTTCAAGTCTAACTGGTGGGATAGCATACCTACTTAAACAAAACAAGGTCGATCATGTAAATGGTTTTGGTTCGATTGTTAACCCCAACGA ]
[-] EMBL CD184120 [ CTTGAAGACAGTATGTGTAGAAAAGAACGAAACTTTGGGCGGTACTTGCTTAAATGTTGGTTGTATTCCCAGCAAATCGTTGTTGAATAACTCACATTTATATCAAC TCGTCAATTCGTCATAAATGCAACACCGT GGAATTGATATTGAAAGTTTTAAGCTAAACCTACCTGCTATGTTGAAAGCTAAAGAAACAGCTGTTTCAAGTCTAACTGGTGGGATAGCATACCTATTTAAACAAAACAAGGTCGATCATGTAAATGGTTTTGGTTCGATTGTTAACCCCAACGAAGTTTTGGTCAAAAAGGCTGACGGAAGTGAAGAACGGATTGCAACTGAACGTATTC ]
[+] EMBL CD096495 [ AGCAAATCGTTGTTGAATAACTCACATTTATATCAAC TCGTCAATTCCTCAGAAATGCAACACCGT GGAATTGATATTGAAAGTTTTAAGCTAAACCTACCTGCTATGTTGAAAGCTAAAGAAAAAGCTGTTTCAAGTCTAACTGGTGGGATAGCATACCTATTTAAACAAAACAAGGTCGATCATGTAAATGGTTTTGGTTCGATTGTTAACCCCAACGAAGTTTTGGTCAAAAAGGCTGACGGAAGTGAAGAACGGATTGCAACTGAACGTATTCTTATTGCAACAGGCAGTGAAGTCACTCCATTCCCTGGGATTGATGTCGATGAACAGTCTGTCGTATCAAGCACTGGCGCATTATCGTTAACTAAGGTCCCTCAACATCTTATAGTTATCGGNGCTGGAGTTATCGGCGTCGAATTAGGTTCTGTATGGAAGCGATTAGGTGCTGAAGTCACTTGTGTGGAGTTCCTTGGTCATGTTGGGGGTATGGGCATCG ]
[+] EMBL CD096447 [ AGCAAATCGTTGTTGAATAACTCACATTTATATCAAC TCGTCAATTCCTCAGAAATGCAACACCGT GGAATTGATATTGAAGGTTTTAAGCTAAACCTACCTGCTATGTTGAAAGCTAAAGAAAAAGCTGTTTCAAGTCTAACTGGTGGGATAGCATACCTATTTAAACAAAACAAGGTCGATCATGTAAATGGTTTTGGTTCGATTGTTAACCCCAACGAAGTTTTGGTCAAAAAGGCTGACGGAAGTGAAGAACGGATTGCAACTGAACGTATTCTTATTGCAACAGGCAGTGAAGTCACTCCATTCCCTGGGATTGATGTCGATGAACAGTCTGTCGTATCAAGCACTGGCGCATTATCGTTAACTAAGGTCCCTCAACATCTTATAGTTATCGGGGCTGGAGTTATCGGCGTCGAATTAGGTTCTGTATGGAAGCGATTAGGTGCTGAAGTCACTTGTGTGGAGTTCCTTGGTCATGTTGGGGGTATGGGCATCGATATGGAAATAAGCAAGAACTTTCAGAANATCTTGACTAAG CAGGNTCTCAA GTTCCTTTTAAATACT ]
[+] EMBL CD155315 [ TCATGTAAATGGTTTTGGTTCGATTGTTAACCCCAACGAAGTTTTGGTCAAAAAGGCTGACGGAAGTGAAGAACGGATTGCAACTGAACGTATTCTTATTGCAACAGGCAGTGAAGTCACTCCATTCCCTGGGATTGATGTCGATGAACAGTCTGTCGTATCAAGCACTGGCGCATTATCGTTAACTAAGGTCCCTCAACATCTTATAGTTATCGGGGCTGGAGTTATCGGCGTCGAATTAGGTTCTGTATGGAAGCGATTAGGTGCTGAAGTCACTTGTGTGGAGTTCCTTGGTCATGTTGGGGGTATGGGCATCGATATGGAAATAAGCAAGAACTTTCAGAAAATCTTGACTAAG CAGGGTCTCAA GTTCCTTTTAAATACTAAAGTTTTGTCAGCGGTC AAATCTGGTGATACCATTACAGTACAGTTAGAAGG ]
[-] EMBL CD128797 [ AATTAGGTTCTGTATGGAAGCGATTAGGTGCTGAAGTCACTTGTGTGGAGTTCCTTGGTCATGTTGGGGGTATGGGCATCGATATGGAAATAAGCAAGAACTTTCAGAAAATCTTGACTAAG CAGGGTCTCAA GTTCCTTTTAAATACTAAAGTTTTGTCAGC GTCAAAATCTGGTGATACCATTACAGTACAGTTAGAAGGTGTAAAAGATGGCAAATCTCAAAGTATTGATTGTGATACCCTTTTAGTGTGTATAGGAAGGCGTCCTTACACCAGTGGACTTGGTTTAGA AAATGTGGGAATCAAATTGGACGAGAAAGGTCGAATTCCCGTTAATAAAAACTTACAGACATCTGTCCCGAATATTTACGCTATCGGTGACTGTATACCTGGTCCGATGTTA GC AC AC AAAGCT GAAGATGAAGG AATAATTTGTGTTGAA ]
[+] EMBL CD193371 [ GGAAATAAGCAAGAACTTTCAGAAAATCTTGACTAAG CAGGGTCTCAA GTTCCTTTTAAATACTAAAGTTTTGTCAGC GTCAAAATCTGGTGATACCATTACAGTACAGTTAGAAGGTGTAAAAGATGGCAAATCTCAAAGTATTGATTGTGATACCCTTTTAGTGTGTATAGGAAGGCG ]
[+] EMBL CD144881 [ TCAGAAAATCTTGACTAAG CAGGGTCTCAA GTTCCTTTTAAATACTAAAGTTTTGTCAGC GTCAAAATCTGGTGATACCATTACAGTACAGTTAGAAGGTGTAAAAGATGGCAAATCTCAAAGTATTGATTGTGATACCCTTTTAGTGTGTATAGGAAGGCGTCCTTACACCAGTGGACTTGGTTTAGA AAATGTGGGAATCAAATTGGACGAGAAAGGTCGAATTCCCGTTAATAAAAACTTTCAGACATCTGTCCCGAATATTTACGCTATCGGTGACTGTATACCTGGTCCGATGTTA GC AC AC AAAGCT GAAGATGAAGG AATAATTTGTGTTGAAGGAATGCTTGGTGGTGCTGTACACATAGATTATAACTGTGTTCCTAGTGTTATCTATA ]
[-] EMBL CD123430 [ GAAAATCTTGACTAAG CAGGGTCTCAA GTTCCTTTTAAATACTAAAGTTTTGTCAGC GTCAAAATCTGGTGATACCATTACAGTACAGTTAGAAGGTGTAAAAGATGGCAAATCTCAAAGTATTGATTGTGATACCCTTTTAGTGTGTATAGGAAGGCGTCCTTACACCAGTGGACTTGGTTTAGA AAATGTGGGAATCAAATTGGACGAGAAAGGTCGAATTCCCGTTAATAAAAACTTTCAGACATCTGTCCCGAATATTTACGCTATCGGTGACTGTATACCTGGTCCGATGTTA GC AC AC AAAGCT GAAGATGAAGG AATAATTTGTGTTGAAGGAATGCTTGATGGTGCTGTACACATAGATTATAACTGTGTTCCTAGTGTTATCTATACTCATCCTGAATGTGCTTGGGTTGGTAAAAATGAAGAACAATGCAAAGCAGAAAACATTCCATACAAAGTAGGCAAATTCCCAATGTCTGCAAATTCACGAGC ]
[-] EMBL CD123441 [ GAAAATCTTGACTAAG CAGGGTCTCAA GTTCCTTTTAAATACTAAAGTTTTGTCAGC GTCAAAATCTGGTGATACCATTACAGTACAGTTAGAAGGTGTAAAAGATGGCAAATCTCAAAGTATTGATTGTGATACCCTTTTAGTGTGTATAGGAAGGCGTCCTTACACCAGTGGACTTGGTTTAGA AAATGTGGGAATCAAATTGGACGAGAAAGGTCGAATTCCCGTTAATAAAAACTTTCAGACATCTGTCCCGAATATTTACGCTATCGGTGACTGAATACCTGGTCCGATGTTA GC AC AC AAAGCT GAAGATGAAGG AATAATTTGTGTTGAAGGAATGCTTGATGGTGCTGTACACATAGATTATAACTGTGTTCCTAGTGTTATCTATACTCATCCTGAATGTGCTTGGGTTGGTAAAAATGAAGAACAATGCAAAGCAGAAAACATTCCATACAAAGTAGGCAAATTCCCAATGTCTGCAAGTTCACGAGC ]
[+] EMBL CD114826 [ TTGACTAAGACAGGGTCTCAATGTTCCTTTTAAATACTAAAGTTTTGTCAGC GTCGAAATCTGGAGATACCTTTACAGTACAGTTAGAAGGTGTAAAAGATGGCAAATCTCAAAGTATTGATTGTGATACCCTTTTAGTGTGTATAGGAAGGCGTCCTTACACCAGTGGACTTGGTTTAGA AAATGTGGGAATCAAATTGGACGAGAAAGGTCGAATTCCCGTTAATAAAAACTTTCAGACATCTGTCCCGAATATTTACGCTATCGGTGACTGTATACCTGGTCCGATGTTAGGCAACAACAAAAGGTGGAAGATGAAGGAAATAATTTGTGTTGAAGGAATGCTTGATGGTGCTGTACACATAGATTATAACTGTGTTCCTAGTGTTATCTATA ]
[-] EMBL CD113556 [ CTTACACCAGTGGACTTGG TTAGACAAATGTGCGAATCAAATTGCACGAGAAAGGTCGCATTCCCGTTAATAAACACTTTCAGACATCTGTCCCGAATATTTACGCTATCGGTGACTGTATACCTGGTCCGATGATA GC AC TC ACAGCT GAAGATGAAGG AATAATTTGTGTTGAAGGAATGCTTGATGGTGCTGTACACATAGACTATAACTGTGTTCTTAGTGTCATCTATAGTCATCGTTAATGTGCTTGGGTTGGTAAAAATGAAGCACAATGCGTAGCAGAAAACATTCCATACAAAGTAGGCAAATTCCCAATGTCTGCAAATTCACGAGCTAAAATTAATGATGCAACTGATGGACTTTTCAAGGCTTTAGCCCCCAAAGATACAGACAGACTTCTTGGAGTACACTTACTTGGTCCATCTGCTGGTGGACTGATTAACGAAGCAGTATTAGCTATGGAGTATAGTGCTTCAGCTGAAGATGTTGCACGTGTCTGTCATGCCCATCCGACGGTGTCCTGAAGCTCTGCGTGAATCTTGTCT ]
[-] EMBL CD077031 [ ATGTGCTTGGGTTGGTAAAAATGAAGAACAATGCAAAGCAGAAAACATTCCATACAAAGTAGGCAAATTCCCAATGTCTGCAAATTCACGAGCTAAAACTAATGATGAAACTGATGGACTTTTCAAGGCTTTAGCCCACAAAGATACAGACAGACTTCTTGGAGTACACTTACTTGGTCCATCTGCTGGTGAACTGATTAATGAAGCAGTATTAGCTATGGAGTATGGTGCTTCAGCTGAAGATGTTGCACGTGTCTGTCATGCCCATCCGACGGTGT TTGAAGCTCTGCGTGAATCTTGTCTCTCTGCATTCTGTGGCAAAGCTATCAATTTTTCATAACATCCAATAGGCAATTAATCAACCTATCGTATATATATAGGTTATTACAATTTAGAAGATGGTTGTTTTTTTACCACATAATACTCTTTTTACTGATAAATTTCATTACAAATGGCTTTTATATTTTAAAGTCAGGGTGGCAACTACTATTTTCATGTGACTTTTCTATAAACACCTCATTTTTTTCTGTTATTTTTGTTTGTTTGCTTGTCTATCCCTTTCTTTTAACTGATAGTTTATTTGATTAGATTCATTTTCTTTAGCATGTTTGTAAAGCAGAATTTTTTTT TTTCGAGGAAAAATAAATTAGTT ]
[+] EMBL CD122938 [ AAGAACAATGCAAAGCAGAAAACATTCCATACAAAGTAGGCAAATTCCCAATGTCTGCAAATTCACGAGCTAAAACTAATGATGAAACTGATGGACTTTTCAAGGCTTTAGCCCACAAAGATACAGACAGACTTCTTGGAGTACACTTACTTGGTCCATCTGCTGGTGAACTGATTAATGAAGCAGTATTAGCTATGGAGTATGGTGCTTCAGCTGAAGATGTTGCACGTGTCTGTCATGCCCATCCGACGGTGT CTGAAGCTCTGCGTGAATCTTGTCTCTCTGCATTCTGTGGCAAAGCTATCAA ]
[-] EMBL CD179552 [ AGAACAATGCAAAGCAGAAAACATTCCATACAAAGTAGGCAAATTCCCAATGTCTGCAAATTCACGAGCTAAAACTAATGATGAAACTGATGGACTTTTCAAGGCTTTAGCCCACAAAGATACAGACAGACTTCTTGGAGTACACTTACTTGGTCCATCTGCTGGTGAACTGATTAATGAAGCAGTATTAGCTATGGAGTATGGTGCTTCAGCTGAAGATGTTGCACGTGTCTGTCATGCCCATCCGACGGTGT CTGAAGCTCTGCGTGAATCTTGTCTCTCTGCATTCTGTGGCAAAGCTATCAAT ]
[-] EMBL AI067588 [ TGGAGTATGGTGCTTCAGCTGAAGATGTTGCACGTGTCTGTCATGCCCATCCGACGGTGT CTGAAGCTCTGCGTGAATCTTGTCTCTCTGCATTCTGTGGCAAAGCTATCAATTTCTCATAACATCCAATAGGCAATTAATCAACCTATCGTATATATATAGGTTATTACAATTTAGAAGATGGTTGTTTTTTTACCACATAATACTCTTTTTACTGATAAATTTCATTACAAATGGCTTTTATATCTTAAAGTCAGGGTGGCAACTACTATTCTCATGTGACTTTTCTATAAACACCTCA TTTTTTCTGTTATTTTTGTTTGTTTGCTTGTCTATCCCTTTCTTTTAACTGATAGTTTATTTGATTAGATTCATTTTCTTTAGCATGTTTGTAAAGCAGAATTTTCTT ]
[-] EMBL CD076937 [ CCGACGGTGT TTGAAACTCTGCGTGAATCTTGTCTCTCTGCATTCTGTGGCAAAACTATCAATTTTTCATAACATCCAATAGGCAATTAATCAACCTATCGTATATATATAGGTTATTACAATTTAAAAAATGGTTGTTTTTTTACCACATAATACTCTTTTTACTGATAAATTTCATTACAAATGGCTTTTATATTTTAAAATCAGGGTGGCAACTACTATTTTCATGTGACTTTTCTATAAACACCTCA TTTTTTCTGTTATTTTTGTTTGTTTGCTTGTCTATCCCTTTCTTTTAACTGATAGTTTATTTGATTAAATTCATTTTCTTTAGCATGTTTGTAAAACAAAATTTTTTTTCTTTCGAGGAAAAATAAAGGAGTT ]
[+] EMBL CD143457 [ TGCGTGAATCTTGTCTCTCTGCATTCTGTGGCAAAGCTATCAATTTCTCATAACATCCAATAGGCAATTAATCAACCTATCGTATATATATAGGTTATTACAGTTTAGAAGATGGTTGTTTTTTTACCACATAATACTCTTTTTACTGATAAATTTCATTACAAATGGCTTTTATATCTTAAAGTCAGGGTGGCAACTACTATTCTCATGTGAC ]
[+] EMBL CD143447 [ TGCGTGAATCTTGTCTCTCTGCATTCTGTGGCAAAGCTATCAATTTCTCATAACATCCAATAGGCAATTAATCAACCTATCGTATATATATAGGTTATTACAATTTAGAAGATGGTTGTTTTTTTACCACATAATACTCTTTTTACTGATAAATTTCATTACAAATGGCTTTTATATCTTAAAGTCAGGGTGGCAACTACTATTCTCATGTGAC ]
[-] EMBL CD143479 [ GCGTGAATCTTGTCTCTCTGCATTCTGTGGCAAAGCTATCAATTTCTCATAACATCCAATAGGCAATTAATCAACCTATCGTATATATATAGGTTATTACAATTTAGAAGATGGTTGTTTTTTTACCACATAATACTCTTTTTACTGATAAATTTCATTACAAATGGCTTTTATATCTTAAAGTCAGGGTGGCAACTACTATTCTCATGTGACT ]
[-] EMBL AI394779 [ ATTCNGTGGCAAAGCTATCAATTTCTCATAACATCCAATAGGCAATTAATCAACCTATCGTATATATATAGGTTATTACAATTTAGAAGATGGTTGTTTTTTTACCACATAATACTCTTTTTACTGATAAATTTCATTACAAATGGCTTTTATATCTTAAAGTCAGGGTGGCAACTACTATTCTCATGTGACTTTTCTATAAACACCTCA TTTTTTCTGTTATTTTTGTTTGTTTGCTTGTCTATCCCTTTCTTTTAACTGATAGTTTATTTGATTAGATTCATTTTCTTTAGCATGTTTGTAAAGCAGAATTTTCTTC TTTCGAGGAAAAATAAATTAGTTATTATAATGAATGTAAAAAAAAAAAAAAA]
consensusID : consensus_11034#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 501 fasta sequence
[GATAATCTTGCCTAAGCAGGGTCTCAAGTTCCTTTTAAATACTACAGTTTTGTCAGCGTCAAAATATGGTGATACCATTACAGTACAGTTAGAAGGTGTAAAAGATGGCAAATCTCAAAGTATTGATTGTGATACCCTTTTAGTGTGTATAGGAAGGCGTCGTTACACCAGTGGTCTGGTTTAGTCAATGTGGGGCCCTCATTGGACGAAAAAGGTAGAAGTCCCGCTAATAAGTAAGGTCAGTCATATGTCGTGACTATAAGCGCTATGGGTTCCGGTATAATTGGTTCGACGGTAGCACTTATAGCTGAAGATGAAGGAATAATCTGTGTTGAAGGGAGGGCTGATCGTGCAGTGCTCATAGATGTATAACGTGTGTTCACACGTGTTATGTATAGCTCATCATGAATGTGTATGGGTCGGTAACAATGAAGACCAATGCAAAGCAGAACACATTCCATACGAAGTAGGCAAATTCGCAATTTCTGATGATTCTCGACC]
[-] EMBL CD123420 [GATAATCTTGCCTAAGCAGGGTCTCAAGTTCCTTTTAAATACTACAGTTTTGTCAGCGTCAAAATATGGTGATACCATTACAGTACAGTTAGAAGGTGTAAAAGATGGCAAATCTCAAAGTATTGATTGTGATACCCTTTTAGTGTGTATAGGAAGGCGTCGTTACACCAGTGGTCTGGTTTAGTCAATGTGGGGCCCTCATTGGACGAAAAAGGTAGAAGTCCCGCTAATAAGTAAGGTCAGTCATATGTCGTGACTATAAGCGCTATGGGTTCCGGTATAATTGGTTCGACGGTAGCACTTATAGCTGAAGATGAAGGAATAATCTGTGTTGAAGGGAGGGCTGATCGTGCAGTGCTCATAGATGTATAACGTGTGTTCACACGTGTTATGTATAGCTCATCATGAATGTGTATGGGTCGGTAACAATGAAGACCAATGCAAAGCAGAACACATTCCATACGAAGTAGGCAAATTCGCAATTTCTGATGATTCTCGACC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11034#0 GTTGCTAGTGGGGTGGGTTTGAGGTTGCGCAGCAAGAATGGTCAGACTCCTTGGTATACA 60
consensus_11034#1 ------------------------------------------------------------
consensus_11034#0 TCACATAGGATCAACTATGAAGTCCCTCTCGAGAGGATTGTCAGTTTCTGCTCATCGTCT 120
consensus_11034#1 ------------------------------------------------------------
consensus_11034#0 TAAGGCGGATGTTGTTGTCATTGGGTCGGGTCCGGGTGGCTATGTTGCCTCCATTAAGGC 180
consensus_11034#1 ------------------------------------------------------------
consensus_11034#0 TGCACAGTTGGGCTTGAAGACAGTATGTGTAGAAAAGAACGAAACTTTGGGCGGTACTTG 240
consensus_11034#1 ------------------------------------------------------------
consensus_11034#0 CTTAAATGTTGGTTGTATTCCCAGCAAATCGTTGTTGAATAACTCACATTTATATCAACT 300
consensus_11034#1 ------------------------------------------------------------
consensus_11034#0 CGTCAATTCCTCAGAAATGCAACACCGTGGAATTGATATTGAAAGTTTTAAGCTAAACCT 360
consensus_11034#1 ------------------------------------------------------------
consensus_11034#0 ACCTGCTATGTTGAAAGCTAAAGAAAAAGCTGTTTCAAGTCTAACTGGTGGGATAGCATA 420
consensus_11034#1 ------------------------------------------------------------
consensus_11034#0 CCTATTTAAACAAAACAAGGTCGATCATGTAAATGGTTTTGGTTCGATTGTTAACCCCAA 480
consensus_11034#1 ------------------------------------------------------------
consensus_11034#0 CGAAGTTTTGGTCAAAAAGGCTGACGGAAGTGAAGAACGGATTGCAACTGAACGTATTCT 540
consensus_11034#1 ------------------------------------------------------------
consensus_11034#0 TATTGCAACAGGCAGTGAAGTCACTCCATTCCCTGGGATTGATGTCGATGAACAGTCTGT 600
consensus_11034#1 ------------------------------------------------------------
consensus_11034#0 CGTATCAAGCACTGGCGCATTATCGTTAACTAAGGTCCCTCAACATCTTATAGTTATCGG 660
consensus_11034#1 ------------------------------------------------------------
consensus_11034#0 GGCTGGAGTTATCGGCGTCGAATTAGGTTCTGTATGGAAGCGATTAGGTGCTGAAGTCAC 720
consensus_11034#1 ------------------------------------------------------------
consensus_11034#0 TTGTGTGGAGTTCCTTGGTCATGTTGGGGGTATGGGCATCGATATGGAAATAAGCAAGAA 780
consensus_11034#1 ------------------------------------------------------------
consensus_11034#0 CTTTCAGAAAATCTTGACTAAGCAGGGTCTCAAGTTCCTTTTAAATACTAAAGTTTTGTC 840
consensus_11034#1 ------GATAATCTTGCCTAAGCAGGGTCTCAAGTTCCTTTTAAATACTACAGTTTTGTC 54
** ******* ********************************* *********
consensus_11034#0 AGCGTCAAAATCTGGTGATACCATTACAGTACAGTTAGAAGGTGTAAAAGATGGCAAATC 900
consensus_11034#1 AGCGTCAAAATATGGTGATACCATTACAGTACAGTTAGAAGGTGTAAAAGATGGCAAATC 114
*********** ************************************************
consensus_11034#0 TCAAAGTATTGATTGTGATACCCTTTTAGTGTGTATAGGAAGGCGTCCTTACACCAGTGG 960
consensus_11034#1 TCAAAGTATTGATTGTGATACCCTTTTAGTGTGTATAGGAAGGCGTCGTTACACCAGTGG 174
*********************************************** ************
consensus_11034#0 ACTTGGTTTAGAAAATGTGGGAATCAAATTGGACGAGAAAGGTCGAATTCCCGTTAATAA 1020
consensus_11034#1 TCT-GGTTTAGTCAATGTGGGGCCCTCATTGGACGAAAAAGGTAGAAGTCCCGCTAATAA 233
** ******* ******** * ********* ****** *** ***** ******
consensus_11034#0 AAACTTTCAGACATCTGTCCCGAATATTTACGCTATCGGTGACTGTATACCTGGTCCGAT 1080
consensus_11034#1 GTAAGGTCAGTCATATGTCGTGACTATAAGCGCTATGGGTTCCGGTATAATTGGTTCGAC 293
* **** *** **** ** *** ****** *** * ***** **** ***
consensus_11034#0 GTTAGCACACAAAGCTGAAGATGAAGGAATAATTTGTGTTGAAGGAATGCTTGATGGTGC 1140
consensus_11034#1 GGTAGCACTTATAGCTGAAGATGAAGGAATAATCTGTGTTGAAGGGAGGGCTGATCGTGC 353
* ****** * ********************* *********** * * **** ****
consensus_11034#0 TGTACACATAGAT-TATAAC-TGTGTTCCTA-GTGTTATCTATA-CTCATCCTGAATGTG 1196
consensus_11034#1 AGTGCTCATAGATGTATAACGTGTGTTCACACGTGTTATGTATAGCTCATCATGAATGTG 413
** * ******* ****** ******* * ******* **** ****** ********
consensus_11034#0 CTTGGGTTGGTAAAAATGAAGAACAATGCAAAGCAGAAAACATTCCATACAAAGTAGGCA 1256
consensus_11034#1 TATGGGTCGGTAACAATGAAGACCAATGCAAAGCAGAACACATTCCATACGAAGTAGGCA 473
***** ***** ******** *************** *********** *********
consensus_11034#0 AATTCCCAATGTCTGCAAATTCACGAGCTAAAACTAATGATGAAACTGATGGACTTTTCA 1316
consensus_11034#1 AATTCGCAATTTCTGATGATTCTCGACC-------------------------------- 501
***** **** **** **** *** *
consensus_11034#0 AGGCTTTAGCCCACAAAGATACAGACAGACTTCTTGGAGTACACTTACTTGGTCCATCTG 1376
consensus_11034#1 ------------------------------------------------------------
consensus_11034#0 CTGGTGAACTGATTAATGAAGCAGTATTAGCTATGGAGTATGGTGCTTCAGCTGAAGATG 1436
consensus_11034#1 ------------------------------------------------------------
consensus_11034#0 TTGCACGTGTCTGTCATGCCCATCCGACGGTGTCTGAAGCTCTGCGTGAATCTTGTCTCT 1496
consensus_11034#1 ------------------------------------------------------------
consensus_11034#0 CTGCATTCTGTGGCAAAGCTATCAATTTCTCATAACATCCAATAGGCAATTAATCAACCT 1556
consensus_11034#1 ------------------------------------------------------------
consensus_11034#0 ATCGTATATATATAGGTTATTACAATTTAGAAGATGGTTGTTTTTTTACCACATAATACT 1616
consensus_11034#1 ------------------------------------------------------------
consensus_11034#0 CTTTTTACTGATAAATTTCATTACAAATGGCTTTTATATCTTAAAGTCAGGGTGGCAACT 1676
consensus_11034#1 ------------------------------------------------------------
consensus_11034#0 ACTATTCTCATGTGACTTTTCTATAAACACCTCATTTTTTCTGTTATTTTTGTTTGTTTG 1736
consensus_11034#1 ------------------------------------------------------------
consensus_11034#0 CTTGTCTATCCCTTTCTTTTAACTGATAGTTTATTTGATTAGATTCATTTTCTTTAGCAT 1796
consensus_11034#1 ------------------------------------------------------------
consensus_11034#0 GTTTGTAAAGCAGAATTTTTTTTTTTCGAGGAAAAATAAATTAGTTATTATAATGAATGT 1856
consensus_11034#1 ------------------------------------------------------------
consensus_11034#0 AAAAAAAAAAAAAAA 1871
consensus_11034#1 ---------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||