These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11039#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 28 consensus length = 1566 fasta sequence [AGCGGTTGTTTCGAACTGCAGGCAACTATTAAGTAATGGATGAAAACGAAAAGAAAGCGAGAGAACTAATTGCTGAGGCACAAAAAAAGAATAAAAAGGGGTTCTTTTCTTTCGGTTTAGGTTCGGACAAGACAGATGAAGCAATATCCTTGTATGAAAAAGCGGGAAATTGTTTTAAGATGGCACATAATTGGACTGAGGCCGGTAATGCATTTCTAGAGGCTGCTAACCTAAGTTTGAGCCAAAAGTCAAAGCATGATGCAGCTACGCATTATGTAAACGCATCGCTAGTTCTTAAGAAGGATGATCCAAAAAAGTCGATTCAGTGTCTCACAAAGGCGATCGAAATATATACTGAGATGGGTCGGTTTACTATAGCTGCAAAACACCACATGACTATAGCTGAAATTTATGAAAAGGACTTAGTAGATATCGAACAGGCGATTCGTCACTACGAACAGGCAGCTGATTATTACAAGGGTGAAGAATCTAACAGTTCAGCGATGAAATGTCAGCTTGCCGTGGCTCAACTCGCCTGTCAGTTGGGACAATGCGATAAGGCTGCTAACTTGTTTGAAGAGGCTGGTAAAGCGTCAATGGAAAACAACTTGTTGAAATATGGTGCTAAA-GGACATCTTTTCAAAGCTGCCATTTGTCATTTCTGTGTGGATTTAATCAATGGTCAGAAAGCGCTCAAAACCTATGAAGAATGTTATCCTATGTTTGCTGACTCCAGAGAGTGTGCTTTGATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG-CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA-ACTTATATATGTGCAAT-ACACTATTTTCCTCCA--TCTTGCACTTACA-ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC-ATTTCCGTATTTTCCTCT-TTGTCTAATTGTGTTTGTAAAATAAGTTTATTTTGTTTTACAAGGTAAACTCTGCTATCTGTTGTTCATGTTTAACCTGGTAATTCCCACTATGAATAATCTTTAATTATTCTCCTATTGTTATTTCTGTATACTGCTTAACAAGCTATTTCAGTGATAACAATCACTTGGTTTCTTTTTCATATTTCATTTTATTAGTGCTATTGTGATACAAGTTTATTCTTCTGACAGTGGATTTAACTTACATAGTAATTGTATGATATCAGCGCTCACTTAACTATACTAAAAAAAACTTGGCCTATACATTTTTTATTGGGTTCTAAATGTTAATGTCCTTATATAGTGTTTGTTGTGTGGAAAGGGCA] [+] EMBL CD113405 [AGCGGTTGTTTCGAACTGCAGGCAACTATTAAGTAATGGATGAAAACGAAAAGAAAGCGAGAGAACTAATTGCTGAGGCACAAAAAAAGAATAAAAAGGGGTTCTTTTCTTTCGGTTTAGGTTCGGACAAGACAGA ] [+] EMBL CD131552 [ CTATTAAGTAATGGATGAAAACGAAAAGAAAGCGAGAGAACTAATTGCTGAGGCACAAAAAAAGATTAAAAAGGGGTTCTTTTCTTTCGGTTTAGGTTCGGACAAGACAGATGAAGCAATATCCTTGTATGAAAAAGCGGGAAATTGTTTTAAGATGGCACATAATTGGACTGAGGCCGGTAATGCATTTCTAGAGGCTGCTAACCTAAGTTTGAGCCAAAAGTCAAAGCATGATGCAGCTACGCATTATGTAAACGCATCGCTAGTTCTTAAGA ] [+] EMBL CD201770 [ AAAAAGAATAAAAAGGGGTTCTTTTCTTTCGGTTTAAGTTCGGACAAGACAGATGAAGCAATATCTTTGTATGAAAAAGCGGGAAATTGTTTTAAGATGGCACATAATTGGACTGAGGCCGGTAATGCATTTCTAGAGGCTGCTAACCTAAGTTTGAGCCAAAAGTCAAAGCATGATGCAGCTACGCATTATGTAAACGCATCGCTAGTTCTTAAGAAGGATGATCCAAAAAAGTCGATTCAGTGTCTCACAAAGGCGATCGAAATATATACTGAGATGGGTCGGCTTACTATAGCTGCAAAACACCACATGACTATAGCTGAAATTTATGAAAAGGACTTAGTAGATATCGAACAGGCGATTCGTCACTACGAACAGGCAGCTGATTATTACAAGGGTGAAGAATCTAACAGTTCAGCGATGAAATGTCAGCTTGCCGTGGCTCAACTCGCCTGTCAGTTGGGACAATGCGATAAGGCTGCTAACTTGTTTGAAGAGGCTGGTAAAGCGTCAATGGAAAACAACTTGTTGAAATATGGTGCTAAANGGACATCTT ] [+] EMBL CD082532 [ aggGTTTTAAGATGGCACATAATTGGACTGAGGCCGGTAATGCATTTCTAGAGGCTGCTAACCTAAGTTTGAGCCAAAAGTCAAAGCATGATGCAGCTACGCATTATGTAAACGCATCGCTAGTTCTTAAGAAGGATGATCCAAAAAAGTCGATTCAGTGTCTCACAAAGGCGATCGAAATATATACTGAGATGGGTCGGTTTACTATAGCTGCAAAACACCACATGACTATAGCTGAAATTTATGAAAAGGACTTAGTAGATATCGAACAGGCGATTCGTCACTACGAACAGGCAGCTGATTATTACAAGGGTGAAGAATCTAACAGTTCAGCGATGAAATGTCAGCTTGCCGTGGCTCAACTCGCCTGTCAGTTGGGACAATGCGATAAGGCTGCTAACTTGTTTGAAGAGGCTGGTAAAGCGTCAATGGAAAACAACTTGTTGAAATATGGTGCTAAA GGACATCTTTTCAAAGCTGCCATTTGTCATTTCTGTGTGGATTTAATCAATGGTCAGAAAGCGCTCANAACCTATGAAGAATGTTATCCTATGTTTGCTGACTCCAGAGAGTGTGCTTTGATGAAGAAATTATC ] [+] EMBL CD190758 [ AGTTTGAGCCAAAAGTCAAAGCATGATGCAGCTACGCATTATGTAAACGCATCGCTAGTTCTTAAGAAGGATGATCCAAAAAAGTCGATTCAGTGTCTCACAAAGGCGATCGAAATATATACTGAGATGGGTCGGTTTACTATAGCTGCAAAACACCACATGACTATAGCTGAAATTTATGAAAAGGACTTAGTAGATATCGAACAGGCGATTCGTCACTACGAACAGGCAGCTGATTATTACAAGGGTGAAGAATCTAACAGTTCAGCGATGAAATGTCAGCTTGCCGTGGCTCAACTCGCCTGTCAGTTGGGACAATGCGATAAGGCTGCT ] [+] EMBL CD188473 [ GATGAAATGTCAGCTTGCCGTGGCTCAACTCGCCTGTCAGTTGGGACAATGCGATAAGGCTGCTAACTTGTTTGAAGAGGCTGGTAAAGCGTCAATGGAAAACAACTTGTTGAAATATGGTGCTAAA GGACATCTTTTCAAAGCTGCCATTTGTCATTTCTGTGTGGATTTAATCAATGGTCACAAAGCGCTCAAAACCTATGAAGAATGTTATCCTATGTTTGCTGACTCCAGAGAGTGTGCTTTGATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTATAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGACAACATTAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTAGTTATTTAAATAAATGAATAATTTAGCACTAACTGTTATCATGTTGAGAACCATGTCAAATAACATTTAGTTGTATCGTATATCTTTTTGAGTTACCATGCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTGCA TCTTGCA ] [+] EMBL CD132653 [ TCAGCTTGCCGTGGCTCAACTCGCCTGTCAGTTGGGACGATGCGATAAGGCTGCTAACTTGTTTGAAGAGGCTGGTAAAGCGTCAATGGAAAACAACTTGTTGAAATATGGTGCTAAA GGACATCTTTTCAAAGCTGCCATTTGTCATTTCTGTGTGGATTTAATCAATGGTCAGAAAGCGCTCAAAACCTATGAAGAATGTTATCCTATGTTTGCTGACTCCAGAGAGTGTGCTTTGATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTNTTCTGA ACTTATATATGTGCCAT ACACTATTTTCCTCCA TCTTGCAC ] [+] EMBL CD136289 [ TGTCAGTTGGGACAATGCGATAAGGCTGCTAACTTGTTTGAAGAGGCTGGTAAAGCGTCAATGGAAAACAACTTGTTGAAATATGGTGCTAAA GGACATCTTTTCAAAGCTGCCATTTGTCATTCCTGTGTGGATTTAATCAATGGCCA ] [-] EMBL CD152910 [ TTTGATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTAAAG CTTAAGAAACCAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGAGACTTATATATGTGCAATCACACTATTTTCCTCCATTTCTTGCACTTACAGATCAACCAA ] [+] EMBL CD152728 [ TGATGAAGAAATTATCAGAGGCTTTGGAACAAGAAAATGTAGAAGCTTTTACAACGGCTGGTCAAGAATATGACAATATAACTCGACTTGGACCATTGATTACATTACTTTTTCTTAAGCCTAAAAAAAACAATAAGTGAAGAAAAGGATATCACTTAATTTTTAAAACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACCTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACACAATTTCCGNATTTTCCTCT TTGGCTAAATGGGTTTGAAAAATAAGTTTATTTTGTTTTACAAG ] [+] EMBL CD201810 [ TGATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTCCGTATTTTCCTCT TTGTCTAATTGTGTTTGTAAAATAAGTTTATTTTGTTTTACAAG ] [+] EMBL CD201767 [ TGATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTGTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTCCGTATTTTCCTCT TTGTCTAATTGTGTTTGTAAAATAAGTTTATTTTGTTTT ] [+] EMBL CD152675 [ TGATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTCCGTATTTTCCTCT ] [+] EMBL CD152653 [ TGATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTCAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTT ] [+] EMBL CD152750 [ TGATGAAGAAATTATCATAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACACCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAGGAAGAGGATATCACTTAATTTTTAAGACTTGACGCTAT ] [-] EMBL CD144996 [ GATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTC ] [-] EMBL CD201801 [ GATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCGACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTC ] [-] EMBL CD145096 [ GATGAAGAGATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTA TTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTC ] [-] EMBL CD152880 [ GATAAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACACGGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCGTTAAG CTTAAGAAAGCAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTAACCATTCATTTTTCTGA ACTTATATATGTGCAAC ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTCCGTATTTTCCTCT TTGTCTAATTGTGTTTGTAAAATAAGTTTATTTTGTTTTACAAGG ] [-] EMBL CD201727 [ GATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTC ] [-] EMBL CD152955 [ GATGAAGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ACTTCCGTATTTTCCTCTGTTGTga ] [-] EMBL CD152885 [ GATGAAGAAATTATCAGAGGCTTTGG ACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTTCATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTCCGTATTTTCCTCT TTGTCTAATTGTGTTTGTAAAATAAGTTTATTTTGTTTTACAAGG ] [+] EMBL AW016993 [ AGAAATTATCAGAGGCTTTGGAACAAGAGAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAATATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAG CTTAAGAAAACAATAAGTGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACA ] [-] EMBL CD076128 [ GAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTCCGTATTTTCCTCT TTGTCTAATTGTGTTTGTAAAATAAGTTTATTTTGTTTTACAAGGTAAACTCTGCTATCTGTTGTTCATGTTTAACCTGGTAATTCCCACTATGAATAATCTTTAATTATTCTCCTATTGTTATTTCTGTATACTGCTTAACAAGCTATTTCAGTGATAACAATCACTTGGTTTCTTTTTCATATTTCATTTTATTAGTGCTATTGTGATACAAGTTTATTCTTCTGACAGTGGATTTAACTTACATAGTAATTGTATGATATCAGCGCTCACTTAACTATACTAAAAAAAACT ] [-] EMBL CD152643 [ AGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAATAATTTAACGCTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGTCTATTTTTTCGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCGTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTAATACTACAACATAAAATTCATTATATTATCATTTACAC ATTTCCGTATTTTCCTCT TTGTCTAATTGTGTTTGTAAAATAAGTTTATTTTGTTTTCCAAGG ] [+] EMBL AW018279 [ TCTATTTTTTTGAGTTACCATTCATTTTTCTGA ACTTATATATGTGCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTCCGTATTTTCCTCT TTGTCTAATTGTGTTTGTAAAATAAGTTTATTTTGTTTTACAAGGTAAACTCTGCTATCTGTTGTTCATGTTTAACCTGGTAATTCCCACTATGAATAATCTTTAATTATTCTCCTATTGTTATTTCTGTATACTGCTTAACAAGCTATTTCAGTGATAACAATCACTTGGTTTCTTTTTCATATTTCATTTTATTAGTGCTATTGTGATACAAGTTTATTCTTCTGACAGTGGATTTAACTTACATAGTAATTGTATGGTATCCGCGCTCACTTAACTATACTAAAAAAACTTTGGCCTATACATTTTTTATTGGGTTCTAAATGTTAATGTCCTTATATAGTGTTTGTTGTGTGGAAAGGGCA] [-] EMBL CD152856 [ GCAAT ACACTATTTTCCTCCA TCTTGCACTTACA ATCAACCAAGACATTCTTGTGTATTAACTTACAGTTTCCTCGTGAGGTTAAGCTTTACAAACTACTACTACAACGTAAAATTCATTCTATTATCATTTACAC ATTTC ] [-] EMBL CD152755 [ TCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCTTGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC ATTTC ] consensusID : consensus_11039#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 289 fasta sequence [NGCCGTGGCNCAACTCGCCTGTTCAGTTGGGAACAATGCGATAAGGCTGCTAACTTGTTTGAAAGAGGCTGGTAAAGCGTCAATGGAAAACAACTTGTTGAAATATGGTGCTAAAGGACATCTTTTCAAAGCTGCCATTTGTCATTTCTGTGTGGAATTTAATCAATGGTCAGAAAAGCGCTCAAAACCTATGAAANAAATGTTATCCTATGTTTTGGCTGAACTCCAGAANAGTGTGCTTTGAATGAAANAAAATTATCAGAGGGCTTTGGAAACAAGAAGAATGTTA] [+] EMBL AA559362 [NGCCGTGGCNCAACTCGCCTGTTCAGTTGGGAACAATGCGATAAGGCTGCTAACTTGTTTGAAAGAGGCTGGTAAAGCGTCAATGGAAAACAACTTGTTGAAATATGGTGCTAAAGGACATCTTTTCAAAGCTGCCATTTGTCATTTCTGTGTGGAATTTAATCAATGGTCAGAAAAGCGCTCAAAACCTATGAAANAAATGTTATCCTATGTTTTGGCTGAACTCCAGAANAGTGTGCTTTGAATGAAANAAAATTATCAGAGGGCTTTGGAAACAAGAAGAATGTTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11039#0 AGCGGTTGTTTCGAACTGCAGGCAACTATTAAGTAATGGATGAAAACGAAAAGAAAGCGA 60 consensus_11039#1 ------------------------------------------------------------ consensus_11039#0 GAGAACTAATTGCTGAGGCACAAAAAAAGAATAAAAAGGGGTTCTTTTCTTTCGGTTTAG 120 consensus_11039#1 ------------------------------------------------------------ consensus_11039#0 GTTCGGACAAGACAGATGAAGCAATATCCTTGTATGAAAAAGCGGGAAATTGTTTTAAGA 180 consensus_11039#1 ------------------------------------------------------------ consensus_11039#0 TGGCACATAATTGGACTGAGGCCGGTAATGCATTTCTAGAGGCTGCTAACCTAAGTTTGA 240 consensus_11039#1 ------------------------------------------------------------ consensus_11039#0 GCCAAAAGTCAAAGCATGATGCAGCTACGCATTATGTAAACGCATCGCTAGTTCTTAAGA 300 consensus_11039#1 ------------------------------------------------------------ consensus_11039#0 AGGATGATCCAAAAAAGTCGATTCAGTGTCTCACAAAGGCGATCGAAATATATACTGAGA 360 consensus_11039#1 ------------------------------------------------------------ consensus_11039#0 TGGGTCGGTTTACTATAGCTGCAAAACACCACATGACTATAGCTGAAATTTATGAAAAGG 420 consensus_11039#1 ------------------------------------------------------------ consensus_11039#0 ACTTAGTAGATATCGAACAGGCGATTCGTCACTACGAACAGGCAGCTGATTATTACAAGG 480 consensus_11039#1 ------------------------------------------------------------ consensus_11039#0 GTGAAGAATCTAACAGTTCAGCGATGAAATGTCAGCTTGCCGTGGCTCAACTCGCCTGT- 539 consensus_11039#1 -------------------------------------NGCCGTGGCNCAACTCGCCTGTT 23 ******** ************ consensus_11039#0 CAGTTGGGA-CAATGCGATAAGGCTGCTAACTTGTTTGAA-GAGGCTGGTAAAGCGTCAA 597 consensus_11039#1 CAGTTGGGAACAATGCGATAAGGCTGCTAACTTGTTTGAAAGAGGCTGGTAAAGCGTCAA 83 ********* ****************************** ******************* consensus_11039#0 TGGAAAACAACTTGTTGAAATATGGTGCTAAAGGACATCTTTTCAAAGCTGCCATTTGTC 657 consensus_11039#1 TGGAAAACAACTTGTTGAAATATGGTGCTAAAGGACATCTTTTCAAAGCTGCCATTTGTC 143 ************************************************************ consensus_11039#0 ATTTCTGTGTGGA-TTTAATCAATGGTCAGAAA-GCGCTCAAAACCTATGAAGAA--TGT 713 consensus_11039#1 ATTTCTGTGTGGAATTTAATCAATGGTCAGAAAAGCGCTCAAAACCTATGAAANAAATGT 203 ************* ******************* ****************** * *** consensus_11039#0 TATCCTATGTTT--GCTGA-CTCCAGA-GAGTGTGCTTTGAT---GAAGAAATTATCAGA 766 consensus_11039#1 TATCCTATGTTTTGGCTGAACTCCAGAANAGTGTGCTTTGAATGAAANAAAATTATCAGA 263 ************ ***** ******* ************ * *********** consensus_11039#0 GG-CTTTGGAA-CAAGA-GAATGTAGAAGCTTTTACAACGGCTGTTCAAGAGTATGACAA 823 consensus_11039#1 GGGCTTTGGAAACAAGAAGAATGTTA---------------------------------- 289 ** ******** ***** ****** consensus_11039#0 TATAACTCGACTTGAACCATGGATTACATCACTTCTCCTTAAGCTTAAGAAAACAATAAG 883 consensus_11039#1 ------------------------------------------------------------ consensus_11039#0 TGAAGAAGAGGATATCACTTAATTTTTAAGACTTGACGTTATTTAGTTAAATAAATAAAT 943 consensus_11039#1 ------------------------------------------------------------ consensus_11039#0 AATTTAACACTAAATGTTATCATGTTGTGAACCATTCCAAATAACATTTAGTTGTTTCGT 1003 consensus_11039#1 ------------------------------------------------------------ consensus_11039#0 CTATTTTTTTGAGTTACCATTCATTTTTCTGAACTTATATATGTGCAATACACTATTTTC 1063 consensus_11039#1 ------------------------------------------------------------ consensus_11039#0 CTCCATCTTGCACTTACAATCAACCAAGACATTCCTGTGTATTAACTTACAGTTTCCTCT 1123 consensus_11039#1 ------------------------------------------------------------ consensus_11039#0 TGAGGTTAAGCTTTACAAACTACTACTACAACATAAAATTCATTCTATTATCATTTACAC 1183 consensus_11039#1 ------------------------------------------------------------ consensus_11039#0 ATTTCCGTATTTTCCTCTTTGTCTAATTGTGTTTGTAAAATAAGTTTATTTTGTTTTACA 1243 consensus_11039#1 ------------------------------------------------------------ consensus_11039#0 AGGTAAACTCTGCTATCTGTTGTTCATGTTTAACCTGGTAATTCCCACTATGAATAATCT 1303 consensus_11039#1 ------------------------------------------------------------ consensus_11039#0 TTAATTATTCTCCTATTGTTATTTCTGTATACTGCTTAACAAGCTATTTCAGTGATAACA 1363 consensus_11039#1 ------------------------------------------------------------ consensus_11039#0 ATCACTTGGTTTCTTTTTCATATTTCATTTTATTAGTGCTATTGTGATACAAGTTTATTC 1423 consensus_11039#1 ------------------------------------------------------------ consensus_11039#0 TTCTGACAGTGGATTTAACTTACATAGTAATTGTATGATATCAGCGCTCACTTAACTATA 1483 consensus_11039#1 ------------------------------------------------------------ consensus_11039#0 CTAAAAAAAACTTGGCCTATACATTTTTTATTGGGTTCTAAATGTTAATGTCCTTATATA 1543 consensus_11039#1 ------------------------------------------------------------ consensus_11039#0 GTGTTTGTTGTGTGGAAAGGGCA 1566 consensus_11039#1 ----------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||