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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11043#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 28 consensus length = 962 fasta sequence
[TGGGGGAGTTTTGCTCTAAACCAGAGAGTGGGAATTCTCAGTCACATCCCGGTGTTTCTCCTGTTGGTACTCAACATACTAGGTCAAGGGAAAGCAATGTCCCAAATGCTTCAACAGCAACAGCTGGCTTTCTATCTAATATGTGTGATACAATATCCCGCTTACAATCCGAAAGCCATTTACCTTCGAATGCCCCACCACCAGGTTTGCGGATTGCCCCCAGCCCTGAGCAGGGTTATGCCAGT-A-GTATCAATCG-GAATGG-GAGGTCT-GAAAGTTTTCCAAG-TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCAGTCCAAACACCTGTGCATCAAGGGAACCAAAAA-C-GCCCCC-CTAGTGGTCAGTCTCAGTTTCACTCAGGACATCCT-ATTCAAATGGGTTCAACTACACCCGGTACTCGTCCAGCTTCAGCGTCTCAGGCTATCCTTCATCATCGCGGAAGTCATCCTGGTTCTTCAGGATTCGGGACAATGAGTTCTCACATCAATCCATCACAACCGATTACCTCACACCTGGATCATAGTTTGCACAATGCACATCATCAGAACAGGGCTTCACCATCACTATCACCCAGTCCTGGAAACAATATTTATCAAAATCGCCGTTCACAACTGGCTCCCCCTTCAACTCATCCGAACAAAAGACTCTATTCCTTA]
[+] EMBL CD202296 [TGGGGGAGTTTTGCTCTAAACCAGAGAGTGGGAATTCTCAGTCACATCCCGGTGTTTCTCCTGTTGGTACTCAACATACTAGGTCAAGGGAAAGCAATGTCCCAAATGCTTCAACAGCAACAGCTGGCTTTCTACCTAATATGTGTGATACAATATCCCGCTTACAATCCGAAAGCCATTTACCTTCGAATGCCCCACCACCAGGTTTGCGGATTGCCCCCAGCCCTGAGCAGGGTTATGCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGT ]
[+] EMBL CD153037 [TGGGGGAGTTTTGCTCTAAACCAGAGAGTGGGAATTCTCAGTCACATCCCGGTGTTTCGCCTGTTGGTACTCAACATACTAGGTCAAGGGAAAGCAATGTCCCAAATGCTTCAACAGCAACAGCTGGCTTTCTATCTAATATGTGTGATACAATATCCCGCTTACAATCCGAAAGCCATTTACCTTCGAATGCCCCACCACCAGGTTTGCGGATTGCCCCCAGCCCTGAGCAGGGTTATGCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGTCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCGACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGT ]
[+] EMBL CD153411 [TGGGGGAGTTTTGCTCTAAACCAGAGAGTGGGAATTCTCAGTCACATCCCGGTGTTTCTCCTGTTGGTACTCAACATACTAGGTCAAGGGAAAGCAATGTCCCAAATGCTTCAACAGCAACAGCTGGCTTTCTATCTAATATGTGTGATACAATATCCCGCTTACAATCCGAAAGCCATTTACCTTCGAATGCCCCGCCACCAGGTTTGCGGATTGCCCCCAGCCCTGAGCAGGGTTATGCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGC ]
[+] EMBL CD153142 [TGGGGGAGTTTTGCTCTAGACCAGAGAGTGGGAATTCTCAGTCACATCCCGGTGTTTCTCCTGTTGGTACTCAACATACTAGGTCAAGGGAAAGCAATGTCCCAAATGCTTCAACAGCAACAGCTGGCTTTCTATCTAATATGTGTGATACAATATCCCGCTTACAATCCGAAAGCCATTTACCTTCGAATGCCCCACCACCAGGTTTGCGGATTGCCCCCAGCCCTGAGCAGGGTTATGCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGC ]
[+] EMBL CD202277 [TGGGGGAGTTTTGCTCTAAACCAGAGAGTGGGAATTCTCAGTCACATCCCGGTGTTTCTCCTGTTGGTACTCAACATACTAGGTCAAGGGAAAGCAATGTCCCAAATGCTTCAACAGCAACAGCTGGCTTTCTATCTAATATGTGTGATACAATATCCCGCTTACAATCCGAAAGCCATTTACCTTCGAATGCCCCACCACCAGGTTTGCGGATTGCCCCCAGCCCTGAGCAGGGTTATGCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGC ]
[-] EMBL CD202255 [ GGGGGAGTTTTGCTCTAAACCAGAGAGTGGGAATTCTCAGTCACATCCCGGTGTTTCTCCTGTTGGTACTCAACATACTAGGTCAAGGGAAAGCAATGTCCCAAATGCTTCAACAGCAACAGCTGGCTTTCTATCTAATATGTGTGATACAATATCCCGCTTACAATCCGAAAGCCATTTACCTTCGAATGCCCCACCACCAGGTTTGCGGATTGCCCCCAGCCCTGAGCAGGGTTATGCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATGTAAGTCAGTCACAACTCAACGCTCTGGCAGCT ]
[-] EMBL CD095362 [ aagtactcGGAATTCTCAGTCACATCCCGGTGTTTCTCCTGTTGGTACTCAACATACTAGGTCAAGGGAAAGCAATGTCCCAAATACTTCAACAGCAACAGCTGGCTTTCTACCTAATATGTGTGATACAATATCCCGCTTACAATCCGAAAGCCATTTACCTTCGAATGCCCCACCACCAGGTTTGCGGATTGCCCCCAGCCCTGAGCAGGGTTATGCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAA ]
[-] EMBL CD095308 [ aagtactcGGAATTCTCAGTCACATCCCGGTGTTTCTCCTGTTGGTACTCAACATACTAGGTCAAGGGAAAGCAATGTCCCAAATACTTCAACAGCAACAGCTGGCTTTCTATCTAATATGTGTGATACAATATCCCGCTTACAATCCGAAAGCCATTTACCTTCGAATGCCCCACCACCAGGTTTGCGGATTGCCCCCAGCCCTGAGCAGGGTTATGCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAA ]
[+] EMBL CD070902 [ GGGTTATGCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACCGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCC ]
[-] EMBL CD199464 [ GGTTATGCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACGAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCA ]
[-] EMBL CD199546 [ GGTTATGCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCT ]
[+] EMBL CD184661 [ TTATGCCAGTAA GTATCAATCG GAATGGCGAGGTCTAGAAAGTTTTCCAAGTTGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCT ]
[+] EMBL CD131135 [ GCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCAGTCCAAACACCTGTGCATCAAGGGAACCAAAAA C GCCCCC CTAGTGGTCAGT ]
[+] EMBL CD185019 [ GCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTGGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATT ]
[+] EMBL CD185002 [ GCCAGT A GTATCAAACG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGAT ]
[+] EMBL CD185012 [ GCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCAGTCCAAACACCTGTGCATCccgg ]
[+] EMBL CD185026 [ GCCAGT A GTATCAATCG GAATGG GAGGTGT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACTTTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCAGTCCANACACCTGTGCATCAAGGGAACCAAAAA C GCCCCC CTAGTGGTCAGT ]
[+] EMBL CD184848 [ GCCAAT ATATATCAATCGCGAATGG GAGGTCT GAAAGTTTTCCAAG TGGATGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTAGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTATATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCAGTCCAAACACCTGTGCATCAAGGGAACCAAAAA C GCCCCC CTAGTGGTCAGTCTCAGTTTCACTCAGGACATCCT ATTCAAATGGGTTCAACTACACCCGGTAC ]
[+] EMBL CD131097 [ GCCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCT ]
[-] EMBL CD184809 [ CCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACGACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCAGTCCAAACACCTGTGCATCAAGGGAACCAAA ]
[-] EMBL CD185009 [ CCAGT A GTATCAATCG GAATGG GAGGTCT GAAAGTTTTCCAAG TGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACGACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTAACATCTGTATCGAAGTCATCATCTCCAACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCAGTCCAAACACCTGTGCATGAAGGGAACCAAAAAGCAGCCCCCACTA ]
[-] EMBL CD184996 [ GCAGGGTTGTGAACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCAACGCTCTGGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCAGTCCAAACACCTGTGCATCAAGGGAACCAAAAA C GCCCCC CTAGTGGTCAGTCTCAGTTTCACTCAGGACATCCT ATTCAAATGGGTTCAACTACACCCGGTACTCGTCCAG ]
[-] EMBL CD184844 [ GGCAGCTGCTTACCATCAACAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCAGTCCAAACACCTGTGCATCAAGGGAACCAAAAA C GCCCCC CTAGAGGTCAGTCCCAGTTTCACTCAGGACATCCT ATTCAAATGGGTTCAACTACACCCGGTACTCGTCCAGCTTCAGCGTCTCAGGCTATCCTTCATCATCGCGGAAGTCATCCTGGTTCTTCAGGATTCGGGACAATGAGTTCTCACATCAATCCATCTCA ]
[-] EMBL CD184834 [ CAGCAGCAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCAGTCCAAACACCTGTGCATCAAGGGAACCAAAAA C GCCCCC CTAGTGGTCAGTCTCAGTTTCACTCAGGACATCCT ATTCAAATGGGTTCAACTACACCCGGTACTCGTCCAGCTTCAGCGTCTCAGGCTATCCTTCATCATCGCGGAAGTCATCCTGGTTCTTCAGGATTCGGGACAATGAGTTCTCACATCAATCCATCACA ]
[-] EMBL CD070896 [ TTGGCCCAACTGCTTCAGGAACTTCAACTCTNGGTCACGTACCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACCCAGTCCAAACACCTGTGCATCAAGGGAACCAAAAA C GCCCCC CTAGTGGTCAGTCTCAGTTTCACTCAGGACATCCTCACCCCCACGGGTTCAACTACACCCGGTACTCGTCCAGCTTCAGCGTCTCAGGCTATCCTTCATCATCGCG ]
[-] EMBL CD070731 [ CAGGANCTTCAACTCTTGGTCACGTACCAGAAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCTCCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCAGTCCAAACACCTGTGCATCAAGGGAACCAAAAA C GCCCCC CTAGTGGTCAGTCTCAGTTTCACTCAGGACATCCT ATTCAAATGGGTTCAACTACACCCGGTACTCGTCCAGCTTCAGCGTCTCAGGCTATCCTTCATCATCGCG ]
[-] EMBL CD061951 [ CC CTAGTGGTCAGTCTCAGTTTCACTCAGGACATCCT ATTCAAATGGGTTCAACTACACCCGGTACTCGTCCAGCTTCAGCGTCTCAGGCTATCCTTCATCATCGCGGAAGTCATCCTGGTTCTTCAGGATTCGGGACAATGAGTTCTCACATCAATCCATCACAACCGATTACCTCACACCTGGATCATAGTTTGCACAATGCACATCATCAGAACAGGGCTTCACCATCACTATCACCCAGTCCTGGAAACAATATTTATCAAAATCGCCGTTCACAACTGGCTCCCCCTTCAACTCATCCGAACAAAAGACTCTATTCCTTA]
[+] EMBL CD164205 [ CACAATGCACATCATCAGACAAGGGCTTCACCATCACTATCACACAGTCCTGGAAACAATATTTATCAAAATCGCCGTTCACAACTGGCTCCC ]
consensusID : consensus_11043#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 613 fasta sequence
[GCCAGTAGTATCAATCGGAATGGGAGGTCTGAAAGTTTTCCAAGTGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCATCCGAACAAAAGACCTCGTATTTCCTTAGGATCCCAATTACCACACTCCATTTCGTCCTTACCTTCTGCTCATGTAACAAATACAATTGCTCCAGCTGAGATGGAAGCTTTGCTGGGGAGTGTTGTTGCTAGTAAGGCGATGGCAAGTATTGCAGCTGGTCCTAACTTTCTTAATCCAAACGCCTATTCTGCAGCTACGGAAGTTGCTGCTGCAGCTGCAGCAGCCCTCACACCTTTTTATACATCAATTAACAATAGCAGCTTATCGAACCCATCATCGGTCGCCACTCCAAATCAAACTGCTTATCAACCGCACATTCAACATCACGGTTCAGTCGGTAGTAATTCAACTTCTGGCACTCATTTATTCAATCAACAACATGTTTTACCATCTTCCAGTTCAGCGTATCCAGGTTCTCTGATGGGTACCTTACCTGGTTCGCTTCTAACCTCGTACAATAACAG]
[+] EMBL CD184788 [GCCAGTAGTATCAATCGGAATGGGAGGTCTGAAAGTTTTCCAAGTGGAGGTCCGGTTCTCACAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTTGTAGCCATCTAAGTCAGTCACAACTCATCCGAACAAAAGACCTCGTATTTCCTTAGGATCCCAATTACCACACTCCATTTCGTCCTTACCTTCTGCTCATGTAACAAATACAATTGCTCCAGCTGAGATGGAAGCTTTGCTGGGGAGTGTTGTTGCTAGTAAGGCGATGGCAAGTATTGCAGCTGGTCCTAACTTTCTTAATCCAAACGCCTATTCTGCAGCTACGGAAGTTGCTGCTGCAGCTGCAGCAGCCCTCA ]
[-] EMBL CD200228 [ GCTGGGGAGTGTTGTTGCTAGTAAGGCGATGGCAAGTATTGCAGCTGGTCCTAACTTTCTTAATCCANACGCCTATTCTGCAGCTACGGAAGTTGCTGCTGCAGCTGCAGCAGCCCTCACACCTTTTTATACATCAATTAACAATAGCAGCTTATCGAACCCATCATCGGTCGCCACTCCAAATCAAACTGCTTATCAACCGCACATTCAACATCACGGTTCAGTCGGTAGTAATTCAACTTCTGGCACTCATTTATTCAATCAACAACATGTTTTACCATCTTCCAGTTCAGCGTATCCAGGTTCTCTGATGGGTACCTTACCTGGTTCGCTTCTAACCTCGTACAATAACAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11043#0 TGGGGGAGTTTTGCTCTAAACCAGAGAGTGGGAATTCTCAGTCACATCCCGGTGTTTCTC 60
consensus_11043#1 ------------------------------------------------------------
consensus_11043#0 CTGTTGGTACTCAACATACTAGGTCAAGGGAAAGCAATGTCCCAAATGCTTCAACAGCAA 120
consensus_11043#1 ------------------------------------------------------------
consensus_11043#0 CAGCTGGCTTTCTATCTAATATGTGTGATACAATATCCCGCTTACAATCCGAAAGCCATT 180
consensus_11043#1 ------------------------------------------------------------
consensus_11043#0 TACCTTCGAATGCCCCACCACCAGGTTTGCGGATTGCCCCCAGCCCTGAGCAGGGTTATG 240
consensus_11043#1 -----------------------------------------------------------G 1
*
consensus_11043#0 CCAGTAGTATCAATCGGAATGGGAGGTCTGAAAGTTTTCCAAGTGGAGGTCCGGTTCTCA 300
consensus_11043#1 CCAGTAGTATCAATCGGAATGGGAGGTCTGAAAGTTTTCCAAGTGGAGGTCCGGTTCTCA 61
************************************************************
consensus_11043#0 CAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTT 360
consensus_11043#1 CAACTGGGCCTCATGCAGGGTTGTTGACTCCGGAAGACATGCTTGCTGCAGCACAAATTT 121
************************************************************
consensus_11043#0 GTAGCCATCTAAGTCAGTCACAACTCAAC-GCTCTGGCAGCTGCTTACCATCAACAGCAG 419
consensus_11043#1 GTAGCCATCTAAGTCAGTCACAACTCATCCGAACAAAAGACCTCGTATT-TCCTTAGGAT 180
*************************** * * * * * ** ** ** *
consensus_11043#0 CAACAAATTCAACGTTCTGTTGGCCCAACTGCTTCAGGAACTTCAACTCTTGGTCACGTA 479
consensus_11043#1 CC-CAATTACCACACTCCATT-------TCGT--------CCTTACCTTCTGCTCATGTA 224
* *** * * ** ** ** * * * * ** ** *** ***
consensus_11043#0 CCAGGAATTACATTTGCGCAGGCTCTAGCAGCCGTTACATCTGTATCGAAGTCATCATCT 539
consensus_11043#1 ACAAA---TACAATTGCTCCAGCT----GAGATGGAAGCTTTGCTGGGGAGT-GTTGTTG 276
** **** **** * *** ** * * * ** * *** * *
consensus_11043#0 CCTACAATTCCTCTGGGTGTTCACAGCTCTCAACAGTCACCTCGATTGCCGGTTCACTCA 599
consensus_11043#1 CTAGTAA--------GGCGATGGCAAGTATTG-----CAGCTGG--TCCTAACTTTCTTA 321
* ** ** * * ** * * ** ** * * * * ** *
consensus_11043#0 GTCCAAACACCTGTGCATCAAGGGAACCAAAAACGCCCCCCTAGTGGT--CAGTCTCAGT 657
consensus_11043#1 ATCCAAACGCCTATTCTGCA--GCTACGGAAGTTGCTGCTGCAGCTGCAGCAGCCCTCAC 379
******* *** * * ** * ** ** ** * ** * *** *
consensus_11043#0 TTCACTCAGGACATCCTATTCAAATGG-GTTCAACTACACCCGGTACTCGTCCAGCTTCA 716
consensus_11043#1 ACCTTTTTATACATCAATTAACAATAGCAGCTTATCGAACCCATCATCGGTC--GCCACT 437
* * ***** * *** * * **** * *** ** *
consensus_11043#0 GCGTCTCAGGCTATCCTTCATCATCGCGGAAGTCATCCTGGTTCTTCAGGATTCGGGACA 776
consensus_11043#1 CCAAATCAAACTGCTTATCAACCGCACATTCAACATCACGGTTCAGTCGG---TAGTAAT 494
* *** ** *** * * * **** ***** ** * *
consensus_11043#0 ATGAGTTCTCACATCAATCCATCACAACCGATTACCTCACAC-CTGGATCATAGTTTGCA 835
consensus_11043#1 TCAACTTCTGGCACTCATTTATT-CAATCAACAACATGTTTTACCATCTTCCAGTTCAGC 553
* **** ** ** ** *** * * ** * * * ****
consensus_11043#0 CAATGCACATCATCAGAACAGGGCTTCACCATCACTATCACCCAGTCCTGGA-AACAATA 894
consensus_11043#1 GTATCCAGGTTCTCTGATGGGTACCTTACC-TGGTTCGCTTCTAACCTCGTACAATAACA 612
** ** * ** ** * * * *** * * * * * * * * ** ** *
consensus_11043#0 TTTATCAAAATCGCCGTTCACAACTGGCTCCCCCTTCAACTCATCCGAACAAAAGACTCT 954
consensus_11043#1 G----------------------------------------------------------- 613
consensus_11043#0 ATTCCTTA 962
consensus_11043#1 --------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||