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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11046#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1656 fasta sequence
[TTGGTGATGATTCGTAGTGATTGGTGCCTGAATAGAAATCCACTGAACAGGTTGATGCATCACAGTAGGAGTGGAACCTAAAGAGGTTGAACCAGTAACGACAGACATGGACGACATAGGTGTAGAAAGGTTGTTTATATTTTGGGTTCGACTTAATCCTGTGTTCTGAGAATTCGAATTAGCAGATACAGATGATGGAACGATAACAACGTTACCCGTGACCCCACTAGAACCTAGAAGAGATTGGGAGGCGTCAGATATCGAGGAAGTTGCAATCGCAGAACTCGTAGATAGTGATGACGTACCAGGCATACTTCCCGATGTAGTCACACGCCTTTGACTTGCTTGAGCACGTAGCTCAGCTTGTTGTTTATGTTGTGAGTGTAGAGCAAAAAAGGCAGCATGAAACTCGGGATGGCGTTTGATCCATGCGATAAACCGACGGTTTTGTTCATCGCTTGAAGTTCCGGTAGCCTTAATAAGGCTGATTACTTGACTAACATGGTCTATTTCAACTTGCGTAGGTTTGTTAGATATGGTTGGTTTTTGACTGTTTACAGGATTAAGGATAGACACAGAAGAGTGAGTTGATGTTGCAGTAGCTGGCTGCGCTTGTGATTGTATTAGTTGTCCGGTAGTCGAATGGACTGTACCTTGAGATGCAGTAGCTATTACTGGGCGAGCTCGCCAACCTGAGGTGACGGACACAGTGACTGGAGTATTTGTACGTTGTACGGGGCCTGTATTTATTGGTGGCTGCATTATGACACGACCTCCAGAAGGCATTACTGAAGAACATACAACAGGTGGACGCGGGTTTGCACC-CTGGTTGTTCTGAGAAGCGACAGTCGGCACTGGGATACGAGGTGGCTGAGAATACTGAGGATTTCCCGTGGAAAGCAATACTGGACCTTGTTGTTGTACCTGAGCTTGTGGTTGAAAACTAACAGGAGTCGTATTACTTAGAGGCTTTTCTACAGAGTTTGAGGAAGTAGATAACTGTGGGTTTCTTACTGTGTTTGTGGTTAAAGACTGGTGATTGGGAGACTGAGTTTGATGCACTGAATTAATGCTACTTTGATTTAAAGAAGTAGAAGAGATAGATGGAATTGCAGAGGTAGGACAACTTTGTGTAGG-AGGTTGTGATTCACTGGTTGGCAGTGCTCCTCGGTGCATTGTCGAAATACGACGTCTGAGCAACTTATTTTGTTGCAACCGCTGCTGCAATAGCTTTTGCTTAACTCTATACTTTATGTTTGAACAGAAGGGAACAGGGCACTTAGACTCTTCACAACTTCGAGCATGGTGCCACAACAGTGACAACAGCTGTTGACAGAGCAAACAACTGTTTGTCGCTTTCTTGGTACAGTTTCGAGTATGGCATAAAACTCGTTTCATCTGAGCACAAGTCTGCATACGGCAATTCGCGTCTCGGCACTGGCAAGCATGAAGTAAAGACCTTATGCATCCTTCTATGCTGATTCGACGATCAGGTGTAGCACCAGTGCCACTGGGTCTATCACCTGTTTCTTCATTTGTGCCTGAATCTTCATCTATGCCAAGACCATATTGAACCATAGGATGTGGATGATTTTCTGTCTTATAACAACGAGAGCACAGATCATATTCTTCACACTCATTACAATGCCACCGAGT]
[-] EMBL CD184831 [TTGGTGATGATTCGTAGTGATTGGTGCCTGAATAGAAATCCACTGAACAGGTTGATGCATCACAGTAGGAGTGGAACCTAAAGAGGTTGAACCAGTAACGACAGACATGGACGACATAGGTGTAGAAAGGTTGTTTATATTTTGGGTTCGACTTAATCCTGTGTTCTGAGAATTCGAATTAGCAGATACAGATGATGGAACGATAACAACGTTACCCGTGACCCCACTAGAACCTAGAAGAGATTGGGAGGCGTCAGATATCGAGGAAGTTGCAATCGCAGAACTCGTAGATAGTGATGACGTACCAGGCATACTTCCCGATGTAGTCACACGCCTTTGACTTGCTTGAGCACGTAGCTCAGCTTGTTGTTTATGTTGTGAGTGTAGAGCAAAAAAGGC ]
[+] EMBL CD128048 [ TAGTGTTTGGTGACTGAATAGAAATCCACTGAACAGGTTGATGCATCACAGTAGGAGTGGAACCTAAAGAGGTTGAACCAGTAACGACAGACATGGACGACATAGGTGTAGAAAGGTTGTTTATATTTTGGGTTCGACTTAATCCTGTGTTCTGAGAATTCGAATTAGCAGATACAGATGATGGAACGATAACAACGTTACCCGTGACCCCACTAGAACCTAGAAGAGATTGGGAGGCGTCAGATATCGAGGAAGTTGCAATCGCAGAACTCGTAGATAGTGATGACGTACCAGGCATACTTCCCGATGTAGTCACACGCCTTTGACTTGCTTGAGCACGTAGCTCAGCTTGTTGTTTA ]
[-] EMBL CD163267 [ GAAATCCACTGAACAGGTTGATGCATCACAGTAGGAGTGGAACCTAAAGAGGTTGAACCAGTAACGACAGACATGGACGACATAGGTGTAGAAAGGTTGTTTATATTTTGGGTTCGACTTAATCCTGTGTTCTGAGAATTCGAATTAGCAGATACAGATGATGGAACGATAACAACGTTACCCGTGACCCCACTAGAACCTAGAAGAGATTGGGAGGCGTCAGATATCGAGGAAGTTGCAATCGCAGAACTCGTAGATAGTGATGACGTACCAGGCATACTTCCCGATGTAGTCACACGCCTTTGACTTGCTTGAGCACGTAGCTCAGCTTGTTGTTTATGTTGTGAGTGTAGAGCAAAAAAGGCAGCATGAAACTCGGGATGGCGTTTGATCCATGCGATAAACCGACGGTTTTGTTCATCGCTTGAAGTTCCGGTAGCCTTAATAAGGCTGATTACTTGACTAACATGGTCTATTTCAACTTGCGTAGGTTTGTTA ]
[-] EMBL CD163113 [ TGAACCAGTAACGACAGACATGGACGACATAGGTGTAGAAAGGTTGTTTATATTTTGGGTTCGACTTAATCCTGTGTTCTGAGAATTCGAATTAGCAGATACAGATGATGGAACGATAACAACGTTACCCGTGACCCCACTAGAACCTAGAAGAGATTGGGAGGCGTCAGATATCGAGGAAGTTGCAATCGCAGAACTCGTAGATAGTGATGACGTACCAGGCATACTTCCCGATGTAGTCACACGCCTTTGACTTGCTTGAGCACGTAGCTCAGCTTGTTGTTTATGTTGTGAGTGTAGAGCAAAAAAGGCAGCATGAAACTCGGGATGGCGTTTGATCCATGCGATAAACCGACGGTTTTGTTCATCGCTTGAAGTTCCGGTAGCCTTAATAAGGCTGATTACTTGACTAACATGGTCTATTTCAACTTGCGTAGGTTTGTTA ]
[+] EMBL CD117536 [ TTGTTTATATTTTGGGTTCGACTTAATCCTGTGTTCTGAGAATTCGAATTAGCAGATACAGATGATGGAACGATAACAACGTTACCCGTGACCCCACTAGAACCTAGAAGAGATTGGGAGGCGTCAGATATCGAGGAAGTTGCAATCGCAGAACTCGTAGATAGTGATGACGTACCAGGCATACTTCCCGATGTAGTCACACGCCTTTGACTTGCTTGAGCACGTA ]
[+] EMBL CD117446 [ TTGTTTATATTTTGGGTTCGACTTAATCCTGTGTTCTGAGAATTCGAATTAGCAGATACAGATGATGGAACGATAACAACGTTACCCGTGACCCCACTAGAACCTAGAAGAGATTGGGAGGCGTCAGATATCGAGGAAGTTGCAATCGCAGAACTCGTAGATAGTGATGACGTACCAGGCATACTTCCCGATGTAGTCACACGCCTTTGACTTGCTTGAGCACGTA ]
[-] EMBL CD179377 [ tnTGGGTTCGACTTAATCCTGTGTTCTGAGAATTCGAATTAGCAGATACAGATGATGGAACGATAACAACGTTACCCGTGACCCCACTAGAACCTAGAAGAGATTGGGAGGCGTCAGATATCGAGGAAGTTGCAATCGCAGAACTCGTAGATAGTGATGACGTACCAGGCATACTTCCCGATGTAGTCACACGCCTTTGACTTGCTTGAGCACGTAGCTCAGCTTGTTGTTTATGTTGTGAGTGTAGAGCAAAAAAGGCAGCATGAAACTCGGGATGGCGTTTGATCCATGCGATAAACCGACGGTTTTGTTCATCGCTTGAAGTTCCGGTAGCCTTAATAAGGCTGATTACTTGACTAACATGGTCTATTTCAACTTGCGTAGGTTTGTTAGATATGGTTGGTTTTTGACTGTTTACAGGATTAAGGATAGACACAGAAGAGTGAGTTGATGTTGCAGTAGCTGGCTGCGCTTGTGATTGTATTAGTTGTCCGGTAGTCGAATGGACTGTACCTTGAGATGCAGTAGCTATTACTGGG ]
[-] EMBL CD169187 [ TTGCTTGAGCACGTAGCTCAGCTTGTTGTTTATGTTGTGAGTGTAGAGCAAAAAAGGCAGCATGAAACTCGGGATGGCGTTTGATCCATGCGATAAACCGACGca ]
[-] EMBL CD169178 [ TTGCTTGAGCACGTAGCTCAGCTTGTTGTTTATGTTGTGAGTGTAGAGCAAAAAAGGCAGCATGAAACTCGGGATGGCGTTTGATCCATGCGATAAACCGACGca ]
[-] EMBL CD179190 [ AAGAGTGAGTTGATGTTGCAGTAGCTGGCTGCGCTTGTGATTGTATTAGTTGTCCGGTAGACGAATGGACTGTACCTTGAGATGCAGTAGCTATTACTGGGCGAGCTCGCCAACCTGAGGTGACGGACACAGTGACTGGAGTATTTGTACGTTGTACGGGGCCTGTATTTATTGGTGGCTGCATTATGACACGACCTCCAGAAGGCATTACTGAAGAACATACAACAGGTGGACGCGGGTTTGCACC CTGGTTGTTCTGAGAAGCGACAGTCGGCACTGGGATACGAGGTGGCTGAGAATACTGAGGATTTCCCGTGGAAAGCAATACTGGACCTTGTTGTTGTACCTGAGCTTGTGGTTGAAAACTAACAGGAGTCGTATTACTTAGAGGCTTTTCTACAGAGTTTGAGGAAGTAGATAACTGTGGGTTT ]
[+] EMBL CD184836 [ ACAGTGACTGGAGTATTTGTACGTTGTACGGGGCCTGTATTTATTGGTGGCTGCATTATGACACGACCTCCAGAAGGCATTACTGAGGAACATACAACAGGTGGACGCGGGTTTGCACCNCTGGTTGTTCTGAGAAGCGACAGTCGGCACTGGGATACGAGGTGGCTGAGAATACTGAGGATTTCCCGTGGAAAGCAATACTGGACCTTGTTGTTGTACCTGAGCTTGTGGTTGAAAACTAACAGGAGTCGTATTACTTAGAGGCTTTTCTACAGAGTTTGAGGAAGTAGATNACTGTGGGTTTCTTACTGTGTTTGTGGTTAAAGACTGGTGATTGGGAGACTGAGTTTGATGCACTGAATTAATGCTACTTTGATTTAAAGAAGTAGAAGAGATAGATGGAATTGCCGAGGTAGGACAACTT ]
[+] EMBL CD094559 [ GAAAACTAACAGGAGTCGTATTACTTAGAGGCTTTTCTACAGAGTTTGAGGAAGTAGATAACTGTGGGTTTCTTACTGTGTTTGTGGTTAAAGACTGGTGATTGGGAGACTGAGTTTGATGCACTGAATTAATGCTACTTTGATTTAAAGAAGTAGAAGAGATAGATGGAATTGCAGAGGTAGGACAACTTTGTGTAGG AGGTTGTGATTCACTGGTTGGCAGTGCTCCTCGGTGCATTGTCGAAATACGACGTCTGAGCAACTTATTTTGTTGCAACCGCTGCTGCAATAGCTTTTGCTTAACTCTATACTTTATGTTTGAACAGAAGGGAACAGGGCACTTAGACTCTTCACAACTTCGAGCATGGTGCCACAACAGTGACAACAGCTGTTGACAGAGCAAACAACTGTTTGTCGCTTTCTTGGTACAGTTTCGAGTATGGCATAAAACTCGTTTCATCTGAGCACAAGTCTGCATACGGCAATTCGCGTCTCGGCACTGGCAAGCATGAAGTAAAGACCTTATGCATCCTTCTATGCTGATTCGACGATCAGGTGTAGCACCAGTGCCACTGGGTCTAT ]
[+] EMBL CD164515 [ acacGAGACTGCTTTTGATGCACTGAATTAATGCTACTTTGATTTAAAGAAGTAGAAGAGATAGATGGAATTGCATATGTAGGACAACTTTGTGTAGGAAGGTTGTGATTCACTGGTTGGCAGTGCTCCTCGGTGCATTGTCGAAATACGACGTCTGAGCAACTTATTTTGTTGCAACCGCTGCTGCAATAGCTTTTGCTTAACTCTATACTTTATGTTTGAACAGAAGGGAACAGGGCACTTAGACTCTTCACAACTTCGAGCATGGTGCCACAACAGTGACAACAGCTGTTGACAGAGCAAACAACTGTTTGTCGCTTTCTTGGTACAGTTTCGAGTATGGCATAAAACTCGTTTCATCTGGGCACAAGTCTGCATACGGCAATTCGCGTCTtgtg ]
[+] EMBL CD154813 [ CATTGTCGAAATACGACGTCTGAGCAACTTATTTTGTTGCAACCGCTGCTGCAATAGCTTTTGCTTAACTCTATACTTTATGTTTGAACAGAAGGGAACAGGGCACTTAGACTCTTCACAACTTCGAGCATGGTGCCACAACAGTGACAACAGCTGTTGACAGAGCAAACAACTGTTTGTCGCTTTCTTGGTACAGTTTCGAGTATGGCATAAAACTCGTTTCATCTGAGCACAAGTCTGCATACGGCAAT ]
[+] EMBL CD154883 [ CATTGTCGAAATACGACGTCTGAGCAACTTATTTTGTTGCAACCGCTGCTGCAATAGCTTTTGCTTAACTCTATACTTTATGTTTGAACAGACGGGAACAGGGCACTTAGACTCTTCACAACTTCGAGCATGGTGCCACAACAGTGACAACAGCTGTTGACAGAGCAAACAACTGTTTGTCGCTTTCTTGGTACAGTTTCGAGTACGGCATAAAACTCGTTTCATCTGACCACAAGTTTGAATACGGGATTTCG ]
[+] EMBL CD154887 [ CATTGTCGAAATACGACGTCTGAGCAACTTATTTTGTTGCAACCGCTGCTGCAATAGCTTTTGCTTAACTCTATACTTTATGTTTGAACAGAAGGGAACAGGGCACTTAGACTCTTCACAACTTCGAGCATGGTGCCACAACAGTGACAACAGCTGTTGACAGAGCAAACAACTGTTTGTCGCTTTCTTGGTACAGTTTCGAGTATGGCATAAAACTCGTTTCATCTGAGCACAAGTCTGCATACGGCAAT ]
[+] EMBL CD154857 [ CATTGTCGAAATACGACGTCTGAGCAACTTATTTTGTTGCAACCGCTGCTGCAATAGCTTTTGCTTAACTCTATACTTTATGTTTGAACAGAAGGGAACAGGGCACCTAGACTCTTCACAACTTCGAGCATGGTGCCACAACAGTGACAACAGCTGTTGACAGAGCAAACAACTGTTTGTCGCTTTCTTGGTACAGTTTCGAGTATGGCATAAAACTCGTTTCATCTGAGCACAAGTCTGCATACGGCAAT ]
[-] EMBL CD116425 [ ATTGTCGAAATACGACGTCTGAGCAACTTATTTTGTTGCAACCGCTGCTGCAATAGCTTTTGCTTAACTCTATACTTTATGTTTGAACAGAAGGGAACAGGGCACTTAGACTCTTCACAACTTCGAGCATGGTGCCACAACGGTGACAACAGCTGTTGACAGAGCAAACAACCGTTTGTCGCTTTCTTGGTACAGTTTCGAGTATGGCATAAAACTCGTTTCATCTGAGCACAAGTCTGCATACGGCAATT ]
[+] EMBL CD154787 [ ACTCTATACTTTATGTTTGAACAGAAGGGAACAGGGCACTTAGACTCTTCACAACTTCGAGCATGGTGCCACAACAGTGACAACAGCTGTTGACAGAGCAAACAACTGTTTGTCGCTTTCTTGGTACAGTTTCGAGTATGGCATAAAACTCGTTTCATCTGAGCACAAGTCTGCATACGGCAATTCGCGTCTCGGCACTGGCAAGCATGTAGTAAAGACCTTATGCATCCTTCTATGCTGATTCGACGATCAGGTGTAGCACCAGTGCCACTGGGTCTATCACCTGTTTCTTCATTTGTGCCTGAATCTTCATCTATGCCAAGACCATATTGAACCATAGGATGTGGATGATTTTCTGTCTTATAACAACGAGAGCACAGATCATATTCTTCACACTCATTACAATGCCACCGAGT]
consensusID : consensus_11046#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 587 fasta sequence
[CGACAGTCGGCACTGGGATACGAGGTGGCTGAGAATACTGAGGATTTCCCGTGGAAAGCAATACTGGACCTTGTTGTTGTACCTGAGCTTGTGGTTGAAAACTAACAGGAGTCGTATTACTTAGAGGCTTTTCTACAGAGTTTGAGGAAGTAGATAACTGTGGGTTTCTTACTGTGTTTGTGGTTAAAGACTGGTGATTGGGAGACTGAGTTTGATGCACTGAATTAATGCTACTTT-GATTTAAAGAAGTAGAAGAGATAGATGGAATTGCAGAGGTAGGACAACTTTGTGTAGGAGGTTGTGATTCACTGGTTGGCAGTGCTCCTCGGTGCATTGTCGAAATACGACGTCTGAGCAACTTATTTTGTTGCAACCGCTGCTGCAATAGCTTTTGCTTAACTCTATACTTTATGTTTGAACAGAAGGGAACAGGGCACTTAGACTCTTCACAACTTCGAGCATGGTGCCACAACAGTGACAACAGCTGTTGACAGAGCAAACAAAATAAGTTGCTCAGATCGAAACTCGGTGGCATTGTAATGAGTGTGAAGGATATGATCTGTGCTCTCGTTGTTATAAGACAGAAA]
[-] EMBL CD124920 [CGACAGTCGGCACTGGGATACGAGGTGGCTGAGAATACTGAGGATTTCCCGTGGAAAGCAATACTGGACCTTGTTGTTGTACCTGAGCTTGTGGTTGAAAACTAACAGGAGTCGTATTACTTAGAGGCTTTTCTACAGAGTTTGAGGAAGTAGATAACTGTGGGTTTCTTACTGTGTTTGTGGTTAAAGACTGGTGATTGGGAGACTGAGTTTGATGCACTGAATTAATGCTACTTT GATTTAAAGAAGTAGAAGAGATAGATGGAATTGCAGAGGTAGGACAACTTTGTGTAGGAGGTTGTGATTCACTGGTTGGCAGTGCTCCTCGGTGCATTGTCGAAATACGACGTCTGAGCAACTTATTTTGTTGCAACCGCTGCTGCAATAGCTTTTGCTTAACTCTATACTTTATGTTTGAACAGAAGGGAACAGGGCACTTAGACTCTTCACAACTTCGAGCATGGTGCCACAACAGTGACAACAGCTGTTGACAGAGCAAACAAAATAAGTTGCTCAGATCGAAACTCGGTGGCATTGTAATGAGTGTGAAGGATATGATCTGTGCTCTCGTTGTTATAAGACAGAAA]
[+] EMBL CD093548 [ AGGTGGCTGAGAATACTGAGGATTTCCCGTGGAAAGCAATACTGGACCTTGTTGTCGTACCTGAGCTTGTGGTTGAAAACTAACAGGAGTCGTATTACTTAGAGGCTTTTCTACAGAGTTTGAGGAAGTAGATAACTGTGGGTTTCTTACTGTGTTTGTGGTTAAAGACTGGTGATTGGGAGACTGAGTTTGATGCACTGAATTAATGCTACTTT GATTTAAAGAAGTAGAAGAGATAGATGGAATTGCAGAGGTAGGACAACTTTGTGTAGGAGGTTGTGATTCACTGGTTGGCAGTGCTCCTCGGTGCATTGTCGAAATACGACGTCTGAGCAACTTATTTTGTTGCAACCGCTGCTGCAATAGCTTTTGCTTAACTCTATACTTTATGTCTGAACAGAAGGGAACAGGGCACTTAGACTCTTCACAACTTC ]
[+] EMBL CD093504 [ AGGTGGCTGAGAATACTGAGGATTTCCCGTGGAAAGCAATACTGGACCTTGTTGTTGTACCTGAGCTTGTGGTTGAAAACTAACAGGAGTCGTATTACTTAGAGGCTTTTCTACAGAGTTTGAGGAAGTAGATAACTGTGGGTTTCTTACTGTGTTTGTGGTTAAAGACTGGTGATTGGGAGACTGAGTTTGATGCACTGAATTAATGCTACTTT GATTTAAAGAAGTAGAAGAGATAGATGGAATTGCAGAGGTAGGACAACTTTGTGTAGGAGGTTGTGATTCACTGGTTGGCAGTGCTCCTCGGTGCATTGTCGAAATACGACGTCTGAGCAACTTATTTTGTTGCAACCGCTGCTGCAATAGCTTTTGCTTAACTCTATACTTTATGTTTGAACAGAA ]
[-] EMBL CD093349 [ TGAGAATACTGAGGATTTCCCGTGGAAAGCAATACTGGACCTTGTTGTTGTACCTGAGCTTGTGGTTGAAAACTAACAGGAGTCGTATTACTTAGAGGCTTTTCTACAGAGTTTGAGGAAGTAGATAACTGTGGGTTTCTTACTGTGTTTGTGGTTAAAGACTGGTGATccaggtg ]
[-] EMBL CD093193 [ TGAGAATACTGAGGATTTCCCGTGGAAAGCAATACTGGACCTTGTTGTTGTACCTGAGCTTGTGGTTGAAAACTAACAGGAGTCGTATTACTTAGAGGCTTTTCTACAGAGTTTGAGGAAGTAGATAACTGTGGGTTTCTTACTGTGTTTGTGGTTAA ]
[+] EMBL CD142512 [ GAATACTGAGGATTTCCCGTGGAAAGCAATACTGGACCTTGTTGTTGTACCTGAGCTTGTGGTTGAAAACTAACTGGAGTCGTATTACTTAGAGGCTTTTCTACAGAGTTTGAGGAAGTAGATAACTGTGGGTTTCTTACTGTGTTTGTGGTTAAAGGCTGGTGATTGGGAGACTGAGTTTGATGCAGTGAATTAATGCTACTTTNGATTT AAG AGTAGAAGAGATAGATGGAATTGCAGAGGTAGGACACCNTTGTGTAGNAGG ]
[+] EMBL CD146827 [ GAAAGCAATACTGGACCTTGTTGTTGTACCTGAGCTTGTGGTTGAAAACTAACAGGAGTCGTATTACTTAGAGGCTTTTCTACAGAGTTTGAGGAAGTAGATAACTGTGGGTTTCTTACTGTGTTTGTGGTTAAAGACTGGTGATTGGGAGACTGAGTTTGATGCACTGAATTAATGCTACTTT GATTTAAAGAAGTAGAAGAGATAGATGGAATTGCAGAGGTAGGACAACTTTGTGTAGGAGGTTGTGATTCACTGG ]
[-] EMBL CD170748 [ TTAATGCTACTTT GATTTAAAGAAGTAGAAGAGATAGATGGAATTGCAGAGGTAGGACAACTTTGTGTAGGAGGTTGTGATTCACTGGTTGGCAGTGCTCCTCGGTGCATTGTCGAAATACGACGTCTGAGCAACTTGTTTTGTTGCAACCGCTGCTGCAATAGCTTTTGCTTAACTCTATACTTTATGTTTGAACAGAAGGGAACAGGGCACTTAGACTCT ]
[+] EMBL CD184759 [ AATGCTACTTT GATTTAAAGAAGTAGAAGAGATAGATGGAATTGCAGAGGTAGGACAACTTTGTGTAGGAGGTTGTGATTCACTGGTT ]
consensusID : consensus_11046#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 405 fasta sequence
[GAAAACTAACAGGAGTCGTATTACTTAGAGGCTTTTCTACAGAGTTTGAGGAAGTAGATAACTGTGGGTTTCTTACTGTGTTTGTGGTTAAAGACTGGTGATTGGGAGACTGAGTTTGATGCACTGAATTAGTGCTACTTGATTTAAAGAAGTAGAAGAGATAGATGGAATTGCAGAGGTAGGACAACTTTGTGTAGGAGGTTGTGATTCACTGGTTGGCAGTGCTCCTCGGTGCATTGTCGAAATACGACGTCTGAGCAACTTATTTTGTTGCAACCGCTGCTGCAATAGCTTTTGCTTAACTCTATACTTTATGTTTGAACAGAAGGGAACAGGGCACTTAGACTCTTCACAACTTCGAGCATGGTGCCACAACAAGGTCCAGTATTGCTTTCCACGGGAAAT]
[+] EMBL CD092009 [GAAAACTAACAGGAGTCGTATTACTTAGAGGCTTTTCTACAGAGTTTGAGGAAGTAGATAACTGTGGGTTTCTTACTGTGTTTGTGGTTAAAGACTGGTGATTGGGAGACTGAGTTTGATGCACTGAATTAGTGCTACTTGATTTAAAGAAGTAGAAGAGATAGATGGAATTGCAGAGGTAGGACAACTTTGTGTAGGAGGTTGTGATTCACTGGTTGGCAGTGCTCCTCGGTGCATTGTCGAAATACGACGTCTGAGCAACTTATTTTGTTGCAACCGCTGCTGCAATAGCTTTTGCTTAACTCTATACTTTATGTTTGAACAGAAGGGAACAGGGCACTTAGACTCTTCACAACTTCGAGCATGGTGCCACAACAAGGTCCAGTATTGCTTTCCACGGGAAAT]
consensusID : consensus_11046#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 262 fasta sequence
[GAGATGCAGTAGCTACTAATGGGCGAGCTCGCCAACCTGAGGTGAAATCCACTGAACAGGTTGATGCATCACAGTAGGAGTGGAACCTAAAGAGGTTGAACCAGTAACGACAGACATGGACGACATAGGTGTAGAAAGGTTGTTTCCGGTAGACGAATGGACTGTACCTTGAGATGCAGTAGCTATTACTGGGCGAGCTCGCCAACCTGAGGTGAAATCCACTGAACAGGTTGATGCATCACAGTAGGAATGGAACCTAAAG]
[-] EMBL CD187351 [GAGATGCAGTAGCTACTAATGGGCGAGCTCGCCAACCTGAGGTGAAATCCACTGAACAGGTTGATGCATCACAGTAGGAGTGGAACCTAAAGAGGTTGAACCAGTAACGACAGACATGGACGACATAGGTGTAGAAAGGTTGTTTCCGGTAGACGAATGGACTGTACCTTGAGATGCAGTAGCTATTACTGGGCGAGCTCGCCAACCTGAGGTGAAATCCACTGAACAGGTTGATGCATCACAGTAGGAATGGAACCTAAAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11046#1 ------------------------------------------------------------
consensus_11046#2 ------------------------------------------------------------
consensus_11046#0 TTGGTGATGATTCGTAGTGATTGGTGCCTGAATAGAAATCCACTGAACAGGTTGATGCAT 60
consensus_11046#3 ------------------------------------------------------------
consensus_11046#1 ------------------------------------------------------------
consensus_11046#2 ------------------------------------------------------------
consensus_11046#0 CACAGTAGGAGTGGAACCTAAAGAGGTTGAACCAGTAACGACAGACATGGACGACATAGG 120
consensus_11046#3 ------------------------------------------------------------
consensus_11046#1 ------------------------------------------------------------
consensus_11046#2 ------------------------------------------------------------
consensus_11046#0 TGTAGAAAGGTTGTTTATATTTTGGGTTCGACTTAATCCTGTGTTCTGAGAATTCGAATT 180
consensus_11046#3 ------------------------------------------------------------
consensus_11046#1 ------------------------------------------------------------
consensus_11046#2 ------------------------------------------------------------
consensus_11046#0 AGCAGATACAGATGATGGAACGATAACAACGTTACCCGTGACCCCACTAGAACCTAGAAG 240
consensus_11046#3 ------------------------------------------------------------
consensus_11046#1 ------------------------------------------------------------
consensus_11046#2 ------------------------------------------------------------
consensus_11046#0 AGATTGGGAGGCGTCAGATATCGAGGAAGTTGCAATCGCAGAACTCGTAGATAGTGATGA 300
consensus_11046#3 ------------------------------------------------------------
consensus_11046#1 ------------------------------------------------------------
consensus_11046#2 ------------------------------------------------------------
consensus_11046#0 CGTACCAGGCATACTTCCCGATGTAGTCACACGCCTTTGACTTGCTTGAGCACGTAGCTC 360
consensus_11046#3 ------------------------------------------------------------
consensus_11046#1 ------------------------------------------------------------
consensus_11046#2 ------------------------------------------------------------
consensus_11046#0 AGCTTGTTGTTTATGTTGTGAGTGTAGAGCAAAAAAGGCAGCATGAAACTCGGGATGGCG 420
consensus_11046#3 ------------------------------------------------------------
consensus_11046#1 ------------------------------------------------------------
consensus_11046#2 ------------------------------------------------------------
consensus_11046#0 TTTGATCCATGCGATAAACCGACGGTTTTGTTCATCGCTTGAAGTTCCGGTAGCCTTAAT 480
consensus_11046#3 ------------------------------------------------------------
consensus_11046#1 ------------------------------------------------------------
consensus_11046#2 ------------------------------------------------------------
consensus_11046#0 AAGGCTGATTACTTGACTAACATGGTCTATTTCAACTTGCGTAGGTTTGTTAGATATGGT 540
consensus_11046#3 ------------------------------------------------------------
consensus_11046#1 ------------------------------------------------------------
consensus_11046#2 ------------------------------------------------------------
consensus_11046#0 TGGTTTTTGACTGTTTACAGGATTAAGGATAGACACAGAAGAGTGAGTTGATGTTGCAGT 600
consensus_11046#3 ------------------------------------------------------------
consensus_11046#1 ------------------------------------------------------------
consensus_11046#2 ------------------------------------------------------------
consensus_11046#0 AGCTGGCTGCGCTTGTGATTGTATTAGTTGTCCGGTAGTCGAATGGACTGTACCTTGAGA 660
consensus_11046#3 ------------------------------------------------------------
consensus_11046#1 ------------------------------------------------------------
consensus_11046#2 ------------------------------------------------------------
consensus_11046#0 TGCAGTAGCTATTACTGGGCGAGCTCGCCAACCTGAGGTGACGGACACAGTGACTGGAGT 720
consensus_11046#3 ------------------------------------------------------------
consensus_11046#1 ------------------------------------------------------------
consensus_11046#2 ------------------------------------------------------------
consensus_11046#0 ATTTGTACGTTGTACGGGGCCTGTATTTATTGGTGGCTGCATTATGACACGACCTCCAGA 780
consensus_11046#3 ------------------------------------------------------------
consensus_11046#1 ------------------------------------------------------------
consensus_11046#2 ------------------------------------------------------------
consensus_11046#0 AGGCATTACTGAAGAACATACAACAGGTGGACGCGGGTTTGCACCCTGGTTGTTCTGAGA 840
consensus_11046#3 ------------------------------------------------------------
consensus_11046#1 --CGACAGTCGGCACTGGGATACGAGGTGGCTGAGAATACTGAGGATTTCCCGTGGAAAG 58
consensus_11046#2 ------------------------------------------------------------
consensus_11046#0 AGCGACAGTCGGCACTGGGATACGAGGTGGCTGAGAATACTGAGGATTTCCCGTGGAAAG 900
consensus_11046#3 ------------------------------------------------------------
consensus_11046#1 CAATACTGGACCTTGTTGTTGTACCTGAGCTTGTGGTTGAAAACTAACAGGAGTCGTATT 118
consensus_11046#2 --------------------------------------GAAAACTAACAGGAGTCGTATT 22
consensus_11046#0 CAATACTGGACCTTGTTGTTGTACCTGAGCTTGTGGTTGAAAACTAACAGGAGTCGTATT 960
consensus_11046#3 ------------------------------------------------------------
consensus_11046#1 ACTTAGAGGCTTTTCTACAGAGTTTGAGGAAGTAGATAACTGTGGGTTTCTTACTGTGTT 178
consensus_11046#2 ACTTAGAGGCTTTTCTACAGAGTTTGAGGAAGTAGATAACTGTGGGTTTCTTACTGTGTT 82
consensus_11046#0 ACTTAGAGGCTTTTCTACAGAGTTTGAGGAAGTAGATAACTGTGGGTTTCTTACTGTGTT 1020
consensus_11046#3 ------------------------------------------------------------
consensus_11046#1 TGTGGTTAAAGACTGGTGATTGGGAGACTGAGTTTGATGCACTGAATTAATGCTACTTTG 238
consensus_11046#2 TGTGGTTAAAGACTGGTGATTGGGAGACTGAGTTTGATGCACTGAATTAGTGCTACTT-G 141
consensus_11046#0 TGTGGTTAAAGACTGGTGATTGGGAGACTGAGTTTGATGCACTGAATTAATGCTACTTTG 1080
consensus_11046#3 ---------------GAGATGCAGTAGCTA---CTAATGGGC-GAGCTCGC-CAACCTGA 40
* *** * ** * *** * ** * * ** *
consensus_11046#1 ATTTAAAGAAGTAGAAGAGATAGATGGAATTGCAGAGGTAGGACAACTTTGTGTAGGAGG 298
consensus_11046#2 ATTTAAAGAAGTAGAAGAGATAGATGGAATTGCAGAGGTAGGACAACTTTGTGTAGGAGG 201
consensus_11046#0 ATTTAAAGAAGTAGAAGAGATAGATGGAATTGCAGAGGTAGGACAACTTTGTGTAGGAGG 1140
consensus_11046#3 GGTGAAATCCACTGAACAGGTTGATGCA-TCACAGTAGGAGTGGAACCTA----AAGAGG 95
* *** *** ** * **** * * *** * ** *** * * ****
consensus_11046#1 TTGTGATTCACTGGTTGGCAGTGCTCCTCGGTGCAT-TGTCGAAATACGACGTCTGAGCA 357
consensus_11046#2 TTGTGATTCACTGGTTGGCAGTGCTCCTCGGTGCAT-TGTCGAAATACGACGTCTGAGCA 260
consensus_11046#0 TTGTGATTCACTGGTTGGCAGTGCTCCTCGGTGCAT-TGTCGAAATACGACGTCTGAGCA 1199
consensus_11046#3 TT--GAACCAGTAAC-GACAGACATGGACGACATAGGTGTAGAAAGGTTGTTTCCG-GTA 151
** ** ** * * *** * ** * *** **** ** * * *
consensus_11046#1 ACTTATTTTGTTGCAACCGCTGCTGCAATAGCTTTTGCTTAACTCTATACTTTATGTTTG 417
consensus_11046#2 ACTTATTTTGTTGCAACCGCTGCTGCAATAGCTTTTGCTTAACTCTATACTTTATGTTTG 320
consensus_11046#0 ACTTATTTTGTTGCAACCGCTGCTGCAATAGCTTTTGCTTAACTCTATACTTTATGTTTG 1259
consensus_11046#3 GACGAATGGACTGTACCTTGAGATGCAGTAGCTATTACTGGGCG--AGCTCGCCAACCTG 209
* * ** * * * **** ***** ** ** * * **
consensus_11046#1 AACAGAAGGGAACAGGGCACTTAGACTCTTCACAACTTCGAGCATGGTGCCACAACAGTG 477
consensus_11046#2 AACAGAAGGGAACAGGGCACTTAGACTCTTCACAACTTCGAGCATGGTGCCACAACAAGG 380
consensus_11046#0 AACAGAAGGGAACAGGGCACTTAGACTCTTCACAACTTCGAGCATGGTGCCACAACAGTG 1319
consensus_11046#3 AGGTGAAATCCACTGAACAGGTTGATGCATCACAGT---AGGAATGGAACCTAAAG---- 262
* *** ** * ** * ** * ***** * **** ** **
consensus_11046#1 ACAACAGCTG-TTGACAGAGCAAACAAAATAAGTTGCTCAGATCGAAACTCGGTGGCATT 536
consensus_11046#2 TCCAGTATTGCTTTCCACGGGAAAT----------------------------------- 405
consensus_11046#0 ACAACAGCTG-TTGACAGAGCAAACAA--CTGTTTGTCGCTTTCTTGGTACAGTTTCGA- 1375
consensus_11046#3 ------------------------------------------------------------
consensus_11046#1 GTAATGAGTGTGAAGGATATGATCTGTGCTCTCGTTGTTATAAGACAGAAA--------- 587
consensus_11046#2 ------------------------------------------------------------
consensus_11046#0 GTATGGCATAAAACTCGTTTCATCTGAGCACAAGTCTGCATACGGCAATTCGCGTCTCGG 1435
consensus_11046#3 ------------------------------------------------------------
consensus_11046#1 ------------------------------------------------------------
consensus_11046#2 ------------------------------------------------------------
consensus_11046#0 CACTGGCAAGCATGAAGTAAAGACCTTATGCATCCTTCTATGCTGATTCGACGATCAGGT 1495
consensus_11046#3 ------------------------------------------------------------
consensus_11046#1 ------------------------------------------------------------
consensus_11046#2 ------------------------------------------------------------
consensus_11046#0 GTAGCACCAGTGCCACTGGGTCTATCACCTGTTTCTTCATTTGTGCCTGAATCTTCATCT 1555
consensus_11046#3 ------------------------------------------------------------
consensus_11046#1 ------------------------------------------------------------
consensus_11046#2 ------------------------------------------------------------
consensus_11046#0 ATGCCAAGACCATATTGAACCATAGGATGTGGATGATTTTCTGTCTTATAACAACGAGAG 1615
consensus_11046#3 ------------------------------------------------------------
consensus_11046#1 -----------------------------------------
consensus_11046#2 -----------------------------------------
consensus_11046#0 CACAGATCATATTCTTCACACTCATTACAATGCCACCGAGT 1656
consensus_11046#3 -----------------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||