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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11051#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 28 consensus length = 1128 fasta sequence
[AATATTTTCGTTGGATAGCATAGGGTCGCGAGTTTTGCG-ATGGAG-CAAACCTGTTATTATAAAATTTTAGGTATTGAGAAAACTGC-TTCAGGCGATGAAATAAAAAAAGCCTATCGCCGACTGGCACTCAAATGGCATCCAGACAAGAACCCAGACAAAAAGGAAGAAGCAGAAAAATGCTTCAAACTCATAAGTGAGGCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGTCCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCTTTCTCAATG-TTTACGCGATTCCACTTCCGAGATCCTATGGATATATTCCGAGAAGTTTTTGCCGGCTCTGGACTCGATTCTTTCTTTGGTCCCAGTATTCATGACTTCCAATTTGGTCCTCAGTTGGGCCGAACTCACAGGTCCAACTCCCATCGCAACGCTGGACGACAATCTGGATCTCCTTATCATCATGCCGGACGTTCTAGTCAAGTACAGAGTTATGATCCCATGCTCACAAACCCTTTCATGGGTGGACTTTTTGACTCTCCGTTTGGTGGGTCACTGTTTAATCCTTTGATGGCTTTC-ACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT-CATCAACCTCCGTCTTCAGTAGC-TTTGGTGGATCTTCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC-GGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT-GATTTTGTATAATCAGTTTCACAGTTATTTGTTGA-GGTCGTTAAAGTAATATTTATGTTGTCTAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTTTGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAATCTTTCCCACTGAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCA]
[-] EMBL CD113449 [AATATTTTCGTTGGAAAGCAAAGGGTCGCGAGTTTTGCGAATGAAGCCAACCCTGTTATTATAAAATTTAAGGTATTGAG AAACTGCTTTCAGCCGATAAAATAAAAAAAGCCTATCGCGAACTGGCACTCAAATGGCATCCAGACAAGAACCCAGACAAAAAGAAAGAAGCAGAAAAATGCTTCAAACTCATAAGTGAGGCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGTCCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCTTTCTCAATG TTTACGCGATTCCACTTCCGAGATCCTATGGATATATTCCGAGAAGTTTTTGCCGGCTCTGGACTCGATTCTTTCTTTGGTCCCAGTATTCATGACTTCCAATTTGGTCCTCAGTTGGGCCGAACTCACAGGTCCAACTCCCATCGCAACGCTGGACGACAATCTGGATCTCCTTATCATCATGCCGGACGTTCTAGTCAAGTACAGAGTTATGATCCCATGCTCACAAACCCTTTCATGGGTGGACTTTCTCACTCTCCGTTTGGTGGGTCACTGTTTAATCCTTTGATGGCTTTC ACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT CATCAACCTCCGTCTTCAGTAGC TTTGG ]
[-] EMBL CD180812 [ gaATTTTCGTTGGATAGCATAGGGTCGCGAGTTTTGCG ATGGAG CAAACCTGTTATTATAAAATTTTAGGTATTGAGAAAACTGC TTCAGGCGATGAAATAAAAAAAGCCTATCGCCGACTGGCACTCAAATGGCATCCAGACAAGAACCCAGACAAAAAGGAAGAAGCAGAAAAATGCTTCAAACTCATAAGTGAGGCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAG ]
[+] EMBL CD113285 [ TTTCGTTGGATAGCATAGGGTCGCGAGTTTTGCG ATGGAG CAAACCTGTTATTATAAAATTTTAGGTATTGAGAAAACTGC TTCAGGCGATGAAATAAAAAAAGCCTATCGCCGACTGGCACTCAAATGGCATCCAGACAAGAACCCAGACAAAAAGGAAGAAGCAGAAAAATGCTTCAAACTCATAAGTGAGGCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGTCCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCTTTCTCAATG TTTACGCGATTCCACTTCCGAGATCCTATGGATATATTCCGAGAAGTTTTTGCCGGCTCTGGACTCGATTCTTTCTTTGGTCCCAGTATTCATGACTTCCAATTTGGTCCTCAGTTGGGCCGAACTCTCAGGTCCAACTCCCATCGCAACGCTGGACGACAATCTGGATCTCCTTATCATCATGCCGGACGTTCTAGTCAAGTACAGAGTTATGATCCCATGCTCACAAACCCTTTCATGGGTGGACTTTCTGACTCTCCGTTTGGTGGGTCACTGTTTAATCCTTTGATGGCTTTC ACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT CATCAACCTNCGTCTTCAGTAGC TTTG ]
[+] EMBL CD140912 [ TCGTTGGATAGCATAGGGTCGCGAGTTTTGCG ATGGAG CAAACCTGTTATTATAAAATTTTAGGTATTGAGAAAACTGC TTCAGGCGATGAAATAAAAAAAGCCTATCGCCGACTGGCACTCAAATGGCATCCAGACAAGAACCCAGACAAAAAGGAAGAAGCAGAAAAATGCTTCAAACTCATAAGTGAGGCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGTCCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCTTTCTCAATG TTTACGCGATTCCACTTCCGAGATCCTATGGATATATTCCGAGAAGTTTTTGCCGGCTCTGGACTCGATTCTTTCTTTGGTCCCAGTATTCATGACTTCCAATTTGGTCCTCAGTTGGGCCGAACTCACAGGTCCAACTCCCATCGCAACGCTGGACGACAATCTGGA ]
[+] EMBL CD140814 [ TCGTTGGATAGCATAGGGTCGCGAGTTTTGCG ATGGAG CAAACCTGTTATTGTAAAATTTTAGGTATTGAGAAAACTGC TTCAGGCGATGAAATAAAAAAAGCCTATCGCCGACTGGCACTCAAATGGCATCCAGACAAGAACCCAGACAAAAAGGAAGAAGCAGAAAAATGCTTCAAACTCATAAGTGAGGCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGACCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCTTTCTCAATG TTTACGCGATTCCACTTCCGAGATCCTATGGATATATTCCGAGAAGTTTTTGCCGGCTCTGGACTCGATTCTTTCTTTGGTCCCAGTATTCATGACTTCCAATTTGGTCCTCAGTTGGGCCGAACTC ]
[+] EMBL CD155353 [ AGCATAGGGTCGCGAGTTTTGCG ATGGAG CAAACCTGTTATTATAAAATTTTAGGTATTGAGAAAACTGC TTCAGGCGATGAAATAAAAAAAGCCTATCGCCGACTGGCACTCAAATGGCATCCAGACAAGAACCCAGACAAAAAGGAAGAAGCAGAAAAATGCTTCAAACTCATAAGTGAGGCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGTCCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCTTTCTCAATGNTTTACngcngaa ]
[+] EMBL AW017055 [ GAGTTTTGCG ATGGAG CAAACCTGTTATTATAAAATTTTAGGTATTGAGAAAACTGC TTCAGGCGATGAAATAAAAAAAGCCTATCGCCGACTGGCACTCAAATGGCATCCAGACAAGAACCCAGACAAAAAGGAAGAAGCAGAAAAATGCTTCAAACTCATAAGTGAGGCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGTCCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCTTTCTCAATG TTTACGCGATTCCACTTCCGAGATCCTATGGATATATTCCGAGAAGTTTTTGCCGGCTCTGGACTCGATTCTTTCTTTGGTCCCAGTATTCATGACTTCCAATTTGGTCCTCAGTTGGGCCGAACTCACAGGTCCAACTCCCATCGCAACGCTGGACGACAATCTGGATCTCCTTATCATCATGCCGGACGTTCTAGTCAAGTACAGAGTTATGATCCCATGCTCACAAACCCTTTCATGGGTGGACTTTTTGACTCTCCGTTTGGTGGGTCACTGTTTAATCCTTTGATGGCTTTC ACCAATTCTGGGTTCGGAAATCT ]
[-] EMBL CD140924 [ ACTGC TTCAGGCGATGAAATAAAAAAAGCCTATCGCCGACTGGCACTCAAATGGCATCCAGACAAGAACCCAGACAAAAAGGAAGAAGCAGAAAAATGCTTCAAACTCATAAGTGAGGCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGTCCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCTTTCTCAATG TTTACGCGATTCCACTTCCGAGATCCTATGGATATATTCCGAGAAGTTTTTGCCGGCTCTGGACTCGATTCTTTCTTTGGTCCCAGTATTCATGACTTCCAATTTGGTCCTCAGTTGGGCCGAACTCACAGGTCCAACTCCCATCGCAACGCTGGACGACAATCTGGATCTCCTTATCATCATGCCGGACGTTCTAGCCAAG ]
[-] EMBL CD147718 [ ATAAGTGAGGCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGTCCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCTTTCTCAATG TTTACGCGATTCCACTTCCGAGATCCTATGGATATATTCCGAGAAGTTTTTGCCGGCTCTGGACTCGATTCTTTCTTTGGTCCCAGTATTCATGACTTCCAATTTGGTCCTCAGTTGGGCCGAACTCACAGGTCCAACTCCCATCGCAACGCTGGACGACAATCTGGATCTCCTTATCATCATGCCGGACGTTCTAGTCAAGTACAGAGTTATGATCCCATGCTCACAAACCCTTTCATGGGTGGACTTTTTGACTCTCCGTTTGGTGGGTCACTGTTTAATCCTTTGATGGCTTTC ACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT CATCAACCTCCGTCTT ]
[+] EMBL CD063640 [ AGGATTCTGATCCTTTCTCAATG TTTACGCGATTCCACTTCCGAGATCCTATGGATATATTCCGAGAAGTTTTTGCCGGCTCTGGACTCGATTCTTTCTTTGGTCCCAGTATTCATGACTTCCAATTTGGTCCTCAGTTGGGCCGAACTCACAGGTCCAACTCCCATCGCAACGCTGGACGACAATCTGGATCTCCTTA ]
[-] EMBL BG931413 [ TCTGGACTCGATTCTTTCTTTGGTCCCAGTATTCATGACTTCCAATTTGGTCCTCAGTTGGGCCGAACTCACAGGTCCAACTCCCATCGCAACGCTGGACGACAATCTGGATCTCCTTATCATCATGCCGGACGTTCTAGTCAAGTACAGAGTTATGATCCCATGCTCACAAACCCTTTCATGGGTGGACTTTTTGACTCTCCGTTTGGTGGGTCACTGTTTAATCCTTTGATGGCTTTC ACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT CATCGAC ]
[+] EMBL CD144244 [ ATGATCCCATGCTCACAAACCCTTTCATGGGTGGACTTTTTGACTCTCCGTTTGGTGGGTCACTGTTTAATCCTTTGATGGCTTTC ACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT CATCAACCTCCGTCTTCAGTAGC TTTGGTGGATCTTCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT GATTTTGTATAATCAGTTTCACA ]
[+] EMBL AI740275 [ TCATGGGTGGACTTTTTGACTCTCCGTTTGGTGGGTCACTGTTTAATCCTTTGATGGCTTTC ACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT CATCAACCTCCGTCTTCAGTAGCTTTTGGTGGATCTTCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACCGGGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT GATTTTGTATAATCAGTTTCACAGTTATTTGTTGA GGTCGTTAAAGTAATATTTATGTTGTCTAATGAAATATGTCTTAATGCGTCAAATTTATTGTTGCGCCAATag ]
[+] EMBL AI882641 [ ATGGGTNGACTTTTTGACTCTCCGTTTGGTGGGTCACTGTTTAATCCTTTGATGGCTTTCGACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT CATCAACCTCCGTCTTCAGTAGC TTTGGTGGATCTTCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATTGGATTTTGTATAATCAGTTTCACAGTTATTTGTTGAGGGTCGTTAAAGTAATATTTATG ]
[+] EMBL BG931126 [ tgcGGGTCACTGTTTAATCCTTTGATGGCTTTC ACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT CATCAATCTCCTTCTTCTATAGC TCAGGTGGATCTTCCTGTGCAAGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAG ]
[+] EMBL BG930577 [ GTCACTGTTTAATCCTTTGATGGCTTTC ACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT CATCAACCTCCGTCTTCAGTAGC TTTGGTGGATCTTCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGA ]
[+] EMBL BG931363 [ GTCACTGTTTAATCCTTTGATGGCTTTC ACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT CATCAACCTCCGTCTTCAGTAAC TTTGGTGGATCTTCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGAAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGA ]
[-] EMBL BG931358 [ TCACTGTTTAATCCTTTGATGGCTTTC ACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTT CATCAACCTCCGTCTTCAGTAGC TTTGGTGGATCTTCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAc ]
[-] EMBL AI395827 [ CTGTTTAAT CTTTGATGGCTATC ACCAATTCTGGGTTCGGAAATCTCCA GGTTCTTCCATCAACCTCCGTCTTCAGTAGC TTTGGTGGATCTTCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGCTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT GATTTTGTATAATCAGTTTCACAGTTATTTGTTGA GGTCGTTAAAGTAATATTTATGTTGTCTAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTTTGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAATCTTTCCCACTGAAAAAAAAAAAAAAAA ]
[-] EMBL AI395162 [ TCTCCAGGGTTCTT CATCCACCTCCGTCTTCAGTAGC TTTGGTGAATCTTCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT GATTTTGTATAATCAGTTTCACAGTTATTTGTTGA GGTCGTTAAAGTAATATTTATGTTGTCTAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTTTGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAATCTTTCCCACTGAAAAAAAAAAAAAAAAA ]
[+] EMBL CD065495 [ GGATCTTCC GTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTACGTACATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT GATTTTGTAT ]
[+] EMBL CD065588 [ TCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACAT CTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT GATTTTGTAT ]
[-] EMBL AI067854 [ TCAGGTCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATACATATATT GATTTTGTATAATCAGTTTCACAGTTATTTGTTGA GGTCGTTAAAGTAATATTTATGTTGTATAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTTTGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAATCTTTCCCACTGAAAAAAAAAAAAAAAAAAAAAAAAACATGC ]
[-] EMBL AI067797 [ TCAGTTTCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT GATTTTGTATAATCAGTTTCACAGTTATTTGTTGA GGTCGTTAAAGTAATATTTATGTTGTCTAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTTTGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAATCTTTCCCACTGAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCA]
[-] EMBL AI067825 [ TCAACATCCTCCAAGTACGTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACCGAAGATGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT GATTTTGTATAATCAGTTTCACAGTTATTTGTTGA GGTCGTTAAAGTAATATCTATGTTGTCTAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTTTGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAATCTTTCCCACTG AAAAAAAAAAAAAAAAAAAAAAAACATGC ]
[-] EMBL AI067116 [ GAATGGTACTGAAACCATTACCGAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT GATTTTGTATAATCAGTTTCACAGTTATTTGTTGA GGTCGTTAAAGTAATATTTATGTTGTATAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTTTGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAATCT ]
[-] EMBL AA999461 [ GAAGAAGTAGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGTAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT GATTTTGTATAATCAGTTTCACAGTTATTTGTTGA GGTCGTTAAAGTAATATTTATGTTGTCTAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATAAGATACGTTGTTTTGGAACTGCACTTAAGACATACCACTATTAAATCCTCTTATAATACTTCTATAAAATAAATat ]
[-] EMBL AI395194 [ AGATGGTCAGGTAACTAACC GGACTGTCCGTCAATGTGGAAATGGAG CCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT GATTTTGTATAATCAGTTTCACAGTTATTTGTTGA GGTCGTTAAAGTAATATTTATGTTGTCTAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTTTGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAATCTTTCCCACTGAAAAAAAAAAAAAAA ]
consensusID : consensus_11051#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 331 fasta sequence
[TTACCGAGGAAGTAGATGGTCAGGTAACTAACCGGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATTGATTGTATAATCAGTTTCACAGTTATTTGTTGAGGTCGTTAAAGTAATATTTATGTTGTCTAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTTTGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAATCTTTCCCACTGAAAAAANNNNNAAAAA]
[-] EMBL AI395603 [TTACCGAGGAAGTAGATGGTCAGGTAACTAACCGGACTGTCCGTCAATGTGGAAATGGAGCCCTGCAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATTGATTGTATAATCAGTTTCACAGTTATTTGTTGAGGTCGTTAAAGTAATATTTATGTTGTCTAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTTTGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAATCTTTCCCACTGAAAAAANNNNNAAAAA]
consensusID : consensus_11051#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 200 fasta sequence
[TCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTTCCGTCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGTCCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCTTTCTCAATGTTTACGCGATTCCACTTCCGAGATCCTATGGATATATACCGA]
[+] EMBL CD065552 [TCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTTCCGTCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGTCCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCTTTCTCAATGTTTACGCGATTCCACTTCCGAGATCCTATGGATATATACCGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11051#0 AATATTTTCGTTGGATAGCATAGGGTCGCGAGTTTTGCGATGGAGCAAACCTGTTATTAT 60
consensus_11051#1 ------------------------------------------------------------
consensus_11051#2 ------------------------------------------------------------
consensus_11051#0 AAAATTTTAGGTATTGAGAAAACTGCTTCAGGCGATGAAATAAAAAAAGCCTATCGCCGA 120
consensus_11051#1 ------------------------------------------------------------
consensus_11051#2 ------------------------------------------------------------
consensus_11051#0 CTGGCACTCAAATGGCATCCAGACAAGAACCCAGACAAAAAGGAAGAAGCAGAAAAATGC 180
consensus_11051#1 ------------------------------------------------------------
consensus_11051#2 ------------------------------------------------------------
consensus_11051#0 TTCAAACTCATAAGTGAGGCATATGAAGTTCTGTCGGATCCCAAAAAGCGTGACATATAT 240
consensus_11051#1 ------------------------------------------------------------
consensus_11051#2 ------------------------------------------------------------
consensus_11051#0 GACAGACGCGGCAGAGGTCCTCATGCTGGTGAGGCATTCGTATTTGAGGATTCTGATCCT 300
consensus_11051#1 ------------------------------------------------------------
consensus_11051#2 ------------------------------------------------------------
consensus_11051#0 TTCTCAATGTTTACGCGATTCCACTTCCGAGATCCTATGGATATATTCCGAGAAGTTTTT 360
consensus_11051#1 ------------------------------------------------------------
consensus_11051#2 ------------------------------------------------------------
consensus_11051#0 GCCGGCTCTGGACTCGATTCTTTCTTTGGTCCCAGTATTCATGACTTCCAATTTGGTCCT 420
consensus_11051#1 ------------------------------------------------------------
consensus_11051#2 ------------------------------------------------------------
consensus_11051#0 CAGTTGGGCCGAACTCACAGGTCCAACTCCCATCGCAACGCTGGACGACAATCTGGATCT 480
consensus_11051#1 ------------------------------------------------------------
consensus_11051#2 ------------------------------------------------------------
consensus_11051#0 CCTTATCATCATGCCGGACGTTCTAGTCAAGTACAGAGTTATGATCCCATGCTCACAAAC 540
consensus_11051#1 ------------------------------------------------------------
consensus_11051#2 ------------------------------------------------------------
consensus_11051#0 CCTTTCATGGGTGGACTTTTTGACTCTCCGTTTGGTGGGTCACTGTTTAATCCTTTGATG 600
consensus_11051#1 ------------------------------------------------------------
consensus_11051#2 ------------------------------------------------------------
consensus_11051#0 GCTTTCACCAATTCTGGGTTCGGAAATCTCCAGGGTTCTTCATCAACCTCCGTCTTCAGT 660
consensus_11051#1 ------------------------------------------------------------
consensus_11051#2 ------------------------------------------------------------
consensus_11051#0 AGCTTTGGTGGATCTTCCTGTGCAGGTGGTTTCAGGTCAGTTTCAACATCCTCCAAGTAC 720
consensus_11051#1 ------------------------------------------------------------
consensus_11051#2 ------------------------------------------------------------
consensus_11051#0 GTAAATGGAAAAATGGTTCGTGTGACAAAAGTGGTAGAGAATGGTACTGAAACCATTACC 780
consensus_11051#1 -------------------------------------------------------TTACC 5
consensus_11051#2 ------------------------------------------------------------
consensus_11051#0 GAAGAAGTAGATGGTCAGGTAACTAACCGGACTGTCCGTCAATGTGGAAATGGAGCCCTG 840
consensus_11051#1 GAGGAAGTAGATGGTCAGGTAACTAACCGGACTGTCCGTCAATGTGGAAATGGAGCCCTG 65
consensus_11051#2 ------------------------------------------------------------
consensus_11051#0 CAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT 900
consensus_11051#1 CAAGCAATGTGATTTATCTTCACACAAAAACATACTTTGTTCGCATAGTATAACTATATT 125
consensus_11051#2 ------------------------------------------------------------
consensus_11051#0 GATTTTGTATAATCAGTTTCACAGTTATTTGTTGAGGTCGTTAAAGTAATATTTATGTTG 960
consensus_11051#1 GATT--GTATAATCAGTTTCACAGTTATTTGTTGAGGTCGTTAAAGTAATATTTATGTTG 183
consensus_11051#2 --TCCTGTGCAGGTGGTTTCA-GGTCAGTT-TCAACATCCTCCAAGTTCCGTC-ATATGA 55
* ** * ****** ** * ** * * ** * **** * ** *
consensus_11051#0 TCTAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTT 1020
consensus_11051#1 TCTAATGAAATATGTCTTAATGCGTCCAATTTATTGTTGCGTCTATTAGATACGTTGTTT 243
consensus_11051#2 AGTTCTGTCGGATCCCAAAAAGCGTGACATATATGACAGACGCGGCAGAGGTCCTCATGC 115
* ** ** * ** **** ** *** * * * * *
consensus_11051#0 TGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAA 1080
consensus_11051#1 TGGAACTGCACTTAAGACATACCACTTTTAAATCCTCTTATAATACTTCTATAAAATAAA 303
consensus_11051#2 TGGTGAGGCATTCGTATTTGAGGATTCT--GATCCTTTCTCAATGTTTACGCGAT-TCCA 172
*** *** * * * * * ***** * *** ** * * *
consensus_11051#0 TCTTTCCCACTGAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCA 1128
consensus_11051#1 TCTTTCCCACTGAAAAAANNNNNAAAAA-------------------- 331
consensus_11051#2 CTTCCGAGATCCTATGGATATATACCGA-------------------- 200
* * * * * *
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||