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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11053#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 24 consensus length = 1173 fasta sequence
[TAACATTTATTAAGAAAGAAAAATACAATAAAAATATTTCGACTGTATAGTGGTTTAGCACTAGCTGAAACTTGATTTCGCAAAAAATCACATTAGAAGTGATGTGCTTATTTTTTACTCCACTGAAGATGAATCTGTTTCAGACGCTGATGATATTTTTCGGGAATATTTAACTCTGGATAAACAGTAAGAAGTTCGCCTGAATTTAGTAACTCTTGTAGGTTACGATACACGTATGATTTGGAATCTATTGATTTTACATCGTGCCCAGTTGTTGAATTGTCACTTGCACATAAACATGATAAGCCAGAAAGAGAAAGGTAAGTATGTAGTGGATCTGGGGTACAAAACTGGTCAGG-AGTCTTTGTAAAGGC-CCCAATAACATCATTCCAACATCTTGTTACAAAACGAACAGCTGAGTTCTTATCGACGAGATGGTGACAGTTTAATATTTTAAGACTAGCACAGACCCAAAATGTGTAACATGTGTCATCTGGTTTACCAACACGCCCATGAAATCCTTCTTCTTGTAAATTCAATAGCCATTTAATCAACAAATCGCGTGACTTGGATCCAGCAGGAATAACTGATTCTAACTTATCGATAAGAGACAAACTGGCTACTGCACAGTAAGTAGCTCCAGCATGTGCTTCCAAATACGGTAAATTGGCGAATCCACCTTGGTAAGTCTGGCATTTTGCGATGAAATCAGC-AACATTTTCACAATTGATAGAATCTAGTCCATCCAAAATATAACAGCTGGCAACTGCAGAAAAGACGAAACGCATAT-CACGTTCCCCGCATATATCT-CCTGCTTTGAACAACCCAGGTTCATCCGAACACTGCATAGCCGATAATCCAGCCAGAGTTCCACGTCTGTCTACACGAGATAAGTTATCACCAAGTAACAACAACGTGGAAAGAGCTGAATAAACCATTGTTACGTGGCTTCCATCATACTTTGAACGGTCCAATGTAGCCTTGAGC-GGATCTGAAGAACAACCGATGAGATTTGAACCTCTGAAGCCACCTTTCTTGTCTTGGAAGTCAGAGGACAATATTTGATGAGAGTACACGAACTCTATGATTTCATTCCTATCCACAATGTCCAATGCATCTAAAAGAGCTAAGCCACTGGATGCGAAAAATCCTCGTGCCGAATTCTGGCCCGAG]
[+] EMBL CD074790 [TAACATTTATTAAGAAAGAAAAATACAATAAAAATATTTCGACTGTATAGTGGTTTAGCACTAGCTGAAACTTGATTTCGCAAAAAATCACATTAGAAGTGATGTGCTTATTTTTTACTCCACTGAAGATGAATCTGTTTCAGACGCTGATGATATTTTTCGGGAATATTTAACTCTGGATAAACAGTAAGAAGTTCGCCTGAATTTAGTAACTCTTGTAGGTTACGATACACGTATGATTTGGAATCTATTGATTTTACATCGTGCCCAGTTGTTGAATTGTCACTTGCACATAAACATGATAAGCCAGAAAGAGAAAGGTAAGTATGTAGTGGATCTGGGGTACAAAACTGGTCAGG AGTCTTTGTAAAGGC CCCAATAACATCATTCCAACATCTTGTTACAAAACGAACAGCTGAGTTCTTATCGACGAGATGGTGACAGTTTAATATTTTAAGACTAGCACAGACCCAAAATGTGTAACATGTGTCATCTGGTTTACCAACACGCCCATGAAATCCTTCTTCTTGTAAATTCAATAGCCATTTAATCAACAAATCGCGTGACTTGGATCCAGCAGGAATAACTGATTCTAACTTATCGATAAGAGACAAACTG ]
[+] EMBL BF936835 [TAACATTTATTAAGAAAGAAAAATACAATAAAAATATTTCGACTGTATAGTGGTTTAGCACTAGCTGAAACTTGATTTCGCAAAAAATCACATTAGAAGTGATGTGCTTATTTTTTACTCCACTGAAGATGAATCTGTTTCAGACGCTGATGATATTTTTCGGGAATATTTAACTCTGGATAAACAGTAAGAAGTTCGCCTGAATTTAGTAACTCTTGTAGGTTACGATACACGTATGATTTGGAATCTATTGATTTTACATCGTGCCCAGTTGTTGAATTGTCACTTGCACATAAACATGATAAGCCAGAAAGAGAAAGGTAAGTATGTAGTGGATCTGGGGTACAAAACTGGTCAGG AGTCTTTGTAAAGGC CCCAATAACATCATTCCAACATCTTGTTACAAAACGAACAGCTGAGTTCTTATCGACGAGATGGTGACAGTTTAATATTTTAAGACTAGCACAGACCCAAAATGTGTAACATGTGTCATCTGGTTTACCAACACGCCCATGAAATCCTTCTTCTTGTAAA ]
[+] EMBL CD060070 [ GCTGAAACTTGATTTCGCAAAAAATTTTATTAGAAGTGATGTGCTTATTTTTTACTGCGGTGAAGATGAATCTGTTTCAGACGCTGATGATATTTTTCGGGAATATTTAACTCTGGATAAACAGTAAGAAGTTCGCCTGAATTTAGTAACTCTTGTAGGTTACGATACACGTATGATTCGGAATCTATTGATTTTACATCGTGCCCAGTTGTTGAATTGTCACTTGCACATAAACATGATAAGCCAGAAAGAGAAAGGTAAGTATGTAGTGGATCTGGGGTACAAAACTGGTCAGG AGTCTTTGTAAAGGC CCCAATAACATCATTCCAACATCTTGTTACAAAACGAACAGCTGAGTTCTTATCGACGAGATGGTGACAGTTTAATACTTTAAGACTAGCACAGACCCAAAATGTGTAACATGTGTCATCTGGTTTACCAACACGCCCATGAAATCCTTCTTCTTGTAAATT AATAGCCATTTAATCAACAAATCGCGTGACTTGGATCCACCAGGAATACTTGAT ]
[+] EMBL CD135447 [ ctntACTGAAGATGAATCTGTTTCAGACGCTGATGATATTTTTCGGGAATATTTAACTCTGGATAAACAGTAAGAAGTTCGCCTGAATTTAGTAACTCTTGTAGGTTACGATACACGTATGATTTGGAATCTATTGATTTTACATCGTGCCCAGTTGTTGAATTGTCACTTGCNCTTAAACATGATAAGCCNGGAAGAGAAAGGTAAGTATG ]
[+] EMBL CD132389 [ AAGAAGTTCGCCTGAATTTAGTAACTCTTGTAGGTTACGATACACGTATGATTTGGAATCTATTGATTTTACATCGTGCCCAGTTGTTGAATTGTCACTTGCACATAAACATGATAAGCCAGAAAGAGAAAGGTAAGTATGTAGTGGATCTGGGGT ]
[-] EMBL CD128023 [ GATACACGTATGATTTGGAATCTATTGATTTTACATCGTGCCCAGTTGTTGAATTGTCACTTGCACATAAACATGATAAGCCAGAAAGAGAAAGGTAAGTATGTAGTGGATCTGGGGTACAAAACTGGTCAGG AGTCTTTGTAAAGGC CCCAATAACATCATTCCAACATCTTGTTACAAAACGAACAGCTGAGTTCTTATCGACGAGATGGTGACAGTTTAATATTTTAAGACTAGCACAGACCCAAAATGTGTAACATGTGTCATCTGGTTTACCAACACGCCCATGAAATCCTTCTTCTTGTAAATTCAATAGCCATTTAATCAACAAATCGCGTGACTTGGATCCAGCAGGAATAACTGATTCTAACTTATCGATAAGAGACAAACTGGCTACTGCACAGTAAGTAGCTCCAGCATGTGCTTCCAAATACGGTAAATTGGCGAATCCACCTTGGTAAGTCTGGCATTTCGCGATGAAATCAGC AACATTTTCACAATTGATAGAATCTAGTCCATCCAAAATATAACAGCTGGCGACTGCAGAAAAGACGAAACGCATATAAACGTTCCCCGCATATACCTACCTtttctca ]
[+] EMBL CD165565 [ atcgCGTGCCCAGTTGTTGAATTGTCACTTGCACATAAACATGATAAGCCAGAAAGAGAAAGGTAAGTATGTAGTGGATCTGGGGTACAAAACTGGTCAGG AGTCTTTGTAAAGGC CCCAATAACATCATTCCAACATCTTGTTACAAAACGAACAGCTGAGTTCTTATCGACGAGATGGTGACAGTTTAATATTTTAAGACTAGCACAGACCCAAAATGTGTAACATGTGTCATCTGGTTTACCAAC ]
[+] EMBL CD165539 [ ctgCGTGCCCAGTTGTTGAATTGTCACTTGCACATAAACATGATAAGCCAGAAAGAGAAAGGTAAGTATGTACTGGATCTGGGGTACAAAACTGGTCAGG AGTCTTTGTAAAGGC CCCAATAACATCATTCCAACATCTTGTTACAAAACGAACAGGTGAGTTCTTATCGACGAGATGGTGACAGTTTAATATTTTAAGACTAGCACAGACCCAAAATGTGTAACATGTGTCATCTGGTTTACCAAC ]
[-] EMBL CD150291 [ GAATTGTCACTTGCACATAAACATGATAAGCCAGAAAGAGAAAGGTAAGTATGTAGTGGATCTGGGGTACAAAACTGGTCAGG AGTCTTTGTAAAGGC CCCAATAACATCATTCCAACATCTTGTTACAAAACGAACAGCTGAGTTCTTATCGACGAGATGGTGACAGTTTAATATTTTAAGACTAGCACAGACCCAAAATGTGTAACATGTGTCATCTGGTTTACCAACACGCCCATGAAATCCTTCTTCTTGTAAATTCAATAGCCATTTAATCAACAAATCGTGTGACTTGGATCCAGCAGGAATAACTGATTCTAACTTATCGATAAGAGACAAACTGGCTACTGCACAGTAAGTAGCTCCAGCATGTGCTTCCAAATACGGTAAAT ]
[+] EMBL CD165578 [ AATTGTCACTTGCACATAAACATGATAAGCCAGAAAGAGAAAGGTAAGTATGTAGTGGATCTGGGGTACAAAACTGGTCAGG AGTCTTTGTAAAGGC CCCAATAACATCATTCCAACATCTTGTTACAAAACGAACAGCTGAGTTCTTATCGACGAGATGGTGACAGTTTAATATTTTAAGACTAGCACAGACCCAAAATGTGTAACATGTGTCATCTGGTTTACCAAC ]
[+] EMBL CD165531 [ AATTGTCACTTGCACATAAACATGATAAGCCACAAAGAGAAAGGTAAGTATGTACTGGATCTGGGGTACAAAACTGGTCAGGCAGTCTTTGTAAAGGCACCCAATAACATCATTCCAACATCTTGCTACAAAACTAACAGCTGAGTTCTTATCGACGAGATGGTGACAGTTTAATATTTTAAGACTAACACAGACCCAAAATGTGTAACATGTGTCATCTGGTTTACCAAC ]
[+] EMBL CD147387 [ AGGTAAGTATGTAGTGGATCTGGGGTACAAAACTGGTCAGG AGTCTTTGTAAAGGC CCCAATAACATCATTCCAACATCTTGTTACAAAACGAACAGCTGAGTTCTTATCGACGAGATGGTGACAGTTTAATATTTTAAGACTAGCACAGACCCAAAATGTGTAACATGTGTCATCTGGTTTACCAACACGCCCATGAAATCCTTCTTCTTGTAAATTCAATAGCCATTTAATCAACAAATCGCGTGAgag ]
[-] EMBL CD127740 [ TCTGGGGTACAAAACTGGTCAGG AGTCTTTGTAAAGGC CCCAATAACATCATTCCAACATCTTGTTACAAAACGAACAGCTGAGTTCTTATCGACGAGATGGTGACAGTTTAATATTTTAAGACTAGCACAGACCCAAAATGTGTAACATGTGTCATCTGGTTTACCAACACGCCCATGAAATCCTTCTTCTTGTAAATTCAATAGCCATTTAATCAACAAATCGCGTGACTTGGATCCAGCAGGAATAACTGATTCTAACTTATCGATAAGAGACAAACTGGCTACTGCACAGTAAGTAGCTCCAGCATGTGCTTCCAAATACGGTAAATTGGCGAATCCACCTTGGTAAGTCTGGCATAAAGCGATGAAATCACCTACCATTTgact ]
[-] EMBL CD150159 [ ACAAAACTGGTCAGG AGTCTTTGTAAAGGC CCCAATAACATCATTCCAACATCTTGTTACAAAACGAACAGCTGAGTTCTTATCGACGAGATGGTGACAGTTTAATATTTTAAGACTAGCACAGACCCAAAATGTGTAACATGTGTCATCTGGTTTACCAACACGCCCATGAAATCCTTCTTCTTGTAAATTCAATAGCCATTTAATCAACAAATCGCGTGACTTGGATCCAGCAGGAATAACTGATTCTAACTTATCGATAAGAGACAAACTGGCTACTGCACAGTAAGTAGCTCCAGCATGTGCTTCCAAATACGGTAGAT ]
[-] EMBL CD150172 [ ACAAAACTGGTCAGG AGTCTTTGTAAAGGC CCCAATAACATCATTCCAACATCTTGTTACAAAACGAACAGCTGAGTTCTTATCGACGAGATGGTGACAGTTTAATATTTTAAGACTAGCACAGACCCAAAATGTGTAACATGTGTCATCTGGTTTACCAACACGCCCATGAAATCCTTCTTCTTGTAAATTCAATAGCCATTTAATCAACAAATCGCGTGACTTGGATCCAGCAGGAATAACTGATTCTAACTTATCGATTAGAGACAAACTGGCTACTGCACAGTAAGTAGCTCCAGCATGTGCTTCCAAATACGGTAAA ]
[-] EMBL CD150201 [ ACAAAACTGGTCAGG AGTCTTCGTAAAGGC CCCAATAACATCATTCCAACATCTTGTTACAAAACGAACAGCTGAGTTCTTATCGACGAGATGGTGACAGTTTAATATTTTAAGACTAGCACAGACCCAAAATGTGTAACATGTGTCATCTGGTTTACCAACACGCCCATGAAATCCTTCTTCTTGTAAATTCAATAGCCATTTAATCAACAAATCGCGTGACTTGGATCCAGCAGGAATAACTGATTCTAACTTATCGATAAGAGACAAACTGGCTACTGCACAGTAAGTAGCTCCAGCATGTGCTTCCAAATACGGTAAAT ]
[-] EMBL CD150268 [ ACAAAACTGGTCAGG AGTCTTTGTAAAGGC CCCAATAACATCATTCCAACATCTTGTTACAAAACGAACAGCTGAGTTCTTATCGACGAGATGGTGACAGTTTAATATTTTAAGACTAGCACAGACCCAAAATGTGTAACATGTGTCATCTGGTTTACCAACACGCCCATGAAACCCTTCTTCTTGTAAATTCAATAGCCATTTAATCAACAAATCGCGTGACTCGGATCCAGCAGGAATAACTGATTCTAACTTATCGATAAGAGACAAACTGGGTACTGCACAGTAAGTAGCTCCAGCATGTGCTTCCAAATACGGTAAAT ]
[-] EMBL CD150290 [ ACAAAACTGGTCAGG AGTCTTTGTAAAGGC CCCAATAACATCATTCCAACATCTTGTTACAAAACGAACAGCTGAGTTCTTATCGACGAGATGGTGACAGTTTAATATTTTAAGACTAGCACAGACCCAAAATGTGTAACATGTGTCATCTGGTTTACCAACACGCCCAAGAAATCCTTCTTCTTGTAAATTCAATAGCCATTTAATCAACAAATCGCGTGACTTGGATCCAGCAGGAATAACTGATTCTAACTTATCGATAAGAGACAAACTGGCCACTACACAGTAAGTAGCTCCAGCATGTGCTTCCAAATACGGTAAAT ]
[-] EMBL CD090970 [ TAAAGGC CCCAATAACATCATTCCGACATCTTGTTACAAGACGAACAGCTGAGTTCTTATCGACGAGATGGTGACAGTTTAATATTTTAAGACTAGCGCAGACCCAAAATGTGTAACATGTGTCATCTGGTTTACCAACACGCCCATGAAATCCTTCTTCTTGTAAATTCAATAGCCATTTAATCAA ]
[-] EMBL CD131068 [ TAGCACAGACCCAAAATGTGTAACATGTGTCATCTGGTTTACCAACACGCCCATGAAATCCTTCTTCTTGTAAATTCAATAGCCATTTAATCAACAAATCGCGTGACTTGGATCCAGCAGGAATAACTGATTCTAACTNATCGATAAGAGACAAACTGGCTACTGCACAGTAAGTAGCTCCAGCATGTGCTTCCAAATACGGTAAATTGGCGAATCCACCCTGGTAAGTCTGGCATTTTGCGATGAAATCAGC AACATTTTCACAATTGATAGAATCTAGTCCATCCAAAATATAACAGCTGGCAACTGCAGAAAAGACGAAACGCATAT CACGTTCCCCGC ]
[-] EMBL CD084303 [ AGCCATTTAATCAACAAATCGCGTGACTTGGATCCAGCAGGAATAACTGATTCTAACTTATCGATAAGAGACAAACTGGCTACTGCACAGTAAGTAGCTCCAGCATGTGCTTCCAAATACGGTAAATTGGCGAATCCACCTTGGTAAGTCTGGCATTTTGCGATGAAATCAGC AACATTTTCACAATTGATAGAATCTAGTCCATCCAAAATATAACAGCTGGCAACTGCAGAAAAGACGAAACGCATAT CACGTTCCCCGCATATATCT CCTGCTTTGAACAACCCAGGTTCATCCGAACACTGCATAGCCGATAATCCAGCCAGAGTTCCACGTCTGTCTACACGAGATAAGTTATCACCAAGTAACAACAACGTGGAAAGAGCTGAATAAACCATTGTTACGTGGCTTCCATCATACTTTGAACGGTCCAATGTAGCCTTGAGC ]
[-] EMBL CD082763 [ ATCCAGCAGGAATAACTGATTCTAACTTATCGATAAGAGACAAACTGGCTACTGCACAGTAAGTAGCTCCAGCATGTGCTTCCAAATACGGTAAATTGGCGAATCCACCTTGGTAAGTCTGGCATTTTGCGATGAAATCAGC AACATTTTCACAATTGATAGAATCTAGTCCATCCAAAATATAACAGCTGGCAACTGCAGAAAAGACGAAACGCATAT CACGTTCCCCGCATATATCT CCTGCTTTGAACAACCCAGGTTCATCCGAACACTGCATAGCCGATAATCCAGCCAGAGTTCCACGTCTGTCTACACGAGATAAGTTATCACCAAGTAACAACAACGTGGAAAGAGCTGAATAAACCATTGTTACGTGGCTTCCATCATACTTTGAACGGTCCAATGTAG CTTCCTCAGGATCTGAAGAACAACCGATGAGATTTGAACCTCTGAAGCCACCTTTCTTGTCTTGGAAGTCAGAGGACAATATTTGATGAGAGTACACGAACTCTATGATTTCATTCCTATCCACAATGTCCAATGCATCTAAAAGAGCTAAGCCACTGGATGCGAAAAATCCTCGTGCCGAATTCTGGCCCGAG]
[-] EMBL CD144847 [ GCTACTGCACAGTAAGTAGTTCCAGCATGTGCTTCCAAATACGGTAAATTGGCGAATCCACCTTGGTAAGTCTGGCATTTTGCGATGAAATCAGC AACATTTTCACAATTGATAGAATCTAGTCCATCCAAAATATAACAGCTGGCAACTGCAGAAAAGACGAAACGCATAT CACGTTCCCCGCATATATCT CCTGCTTTGAACAACCCAGGTTCATCCGAACACTGCATAGCCGATAATCCAGCCAGAGTTCCACGTCTGTCTACACGAGATAAGTTATCACCAAGTAACAACAACGTGGAAAGAGCTGAATAAACCATTGTTACGTGGCTTCCA ]
[+] EMBL CD148053 [ CATTTTGCGATGAAATCAGC AACATTTTCACAATTGATAGAATCTAGTCCATCCAAAATATAACAGCTGGCAACTGCAGAAAAGACGAAACGCATAT CACGTTCCCCGCATATATC ]
consensusID : consensus_11053#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 620 fasta sequence
[AGCAGGAATTACTGCACAGTAAGTAGCTCCAGCATGTGCTTCCAAATACGGTAAATTGGCGAATCCACCTTGGTAAGTCTGGCATTNTGCGATGAAATCAGCAACATTTTCACAATTGATAGAATCTAGTCCATCCAAAATATAACAGCTGGCAACTGCAGAAAAGACGAANNNNNNNNNNNNNNNNNNNGCATATATCTCCTGCTTTGAACAACCCAGGTTCATCCGAACACTGCATAGCCGATAATCCAGCCAGAGTTCCACGTCTGTCTACACGAGATAAGTTATCACCAAGTAACAACAACGTGGAAAGAGCTGAATAAACCATTGTTACGTGGCTAGCTTCCTCAGGATCTGAAGAACAACCGATGAGATTTGAACCTCTGAAGCCACCTTTCTTGTCTTGGAAGTCAGAGGACAATATTTGATGAGAGTACACGAACTCTATGATTTCATTCCTATCCACAATGTCCAATGCATCTAAAAGAGCTAAGCCACTGGATGCGAAAAATAAAACGACAATCCTAGATGAGTCAAGAGAAACCATAGAATAAGGAAGTATTCCAGTGCATCTCTTAAAGTAAATCTTCAGCTTCTGCCGAACTTTATTATCAGAATCA]
[-] EMBL CD080959 [AGCAGGAATTACTGCACAGTAAGTAGCTCCAGCATGTGCTTCCAAATACGGTAAATTGGCGAATCCACCTTGGTAAGTCTGGCATTNTGCGATGAAATCAGCAACATTTTCACAATTGATAGAATCTAGTCCATCCAAAATATAACAGCTGGCAACTGCAGAAAAGACGAANNNNNNNNNNNNNNNNNNNGCATATATCTCCTGCTTTGAACAACCCAGGTTCATCCGAACACTGCATAGCCGATAATCCAGCCAGAGTTCCACGTCTGTCTACACGAGATAAGTTATCACCAAGTAACAACAACGTGGAAAGAGCTGAATAAACCATTGTTACGTGGCTAGCTTCCTCAGGATCTGAAGAACAACCGATGAGATTTGAACCTCTGAAGCCACCTTTCTTGTCTTGGAAGTCAGAGGACAATATTTGATGAGAGTACACGAACTCTATGATTTCATTCCTATCCACAATGTCCAATGCATCTAAAAGAGCTAAGCCACTGGATGCGAAAAATAAAACGACAATCCTAGATGAGTCAAGAGAAACCATAGAATAAGGAAGTATTCCAGTGCATCTCTTAAAGTAAATCTTCAGCTTCTGCCGAACTTTATTATCAGAATCA]
consensusID : consensus_11053#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 455 fasta sequence
[TGCATAGCCGATAATCCAGCCAGAGTTCCACGTCTGTCTACACGAGATAAGTTATCACCAAGTAACAACAACGTGGAAAGAGCTGAATAAACCATTGTTACGTGGCTTCCATCATACTTTGAACGGTCCAATGTAGCTTCCTCAGGATCTGAAGAACAACCGATGAGATTTGAACCTCTGAAGCCACCTTTCTTGTCTTGGAAGTCAGAGGACAATATTTGATGAGAGTACACGAACTCTATGATTTCATTCCTATCCACAATGTCCAATGCATCTAAAAGAGCTAAGCCACTGGATGCGAAAAATAAAACGACAATCCTAGATGAGTCAAGAGAAACCATAGAATAAGGAAGTATTCCAGTGCATCTCTTAAAGTAAATCCTCAGCTTCTGCCGAACTTTATTATCAGAATCACAGACCATTAAGTCATAATTTGATAATGCCTTAATGAACGC]
[+] EMBL CD170823 [TGCATAGCCGATAATCCAGCCAGAGTTCCACGTCTGTCTACACGAGATAAGTTATCACCAAGTAACAACAACGTGGAAAGAGCTGAATAAACCATTGTTACGTGGCTTCCATCATACTTTGAACGGTCCAATGTAGCTTCCTCAGGATCTGAAGAACAACCGATGAGATTTGAACCTCTGAAGCCACCTTTCTTGTCTTGGAAGTCAGAGGACAATATTTGATGAGAGTACACGAACTCTATGATTTCATTCCTATCCACAATGTCCAATGCATCTAAAAGAGCTAAGCCACTGGATGCGAAAAATAAAACGACAATCCTAGATGAGTCAAGAGAAACCATAGAATAAGGAAGTATTCCAGTGCATCTCTTAAAGTAAATCCTCAGCTTCTGCCGAACTTTATTATCAGAATCACAGACCATTAAGTCATAATTTGATAATGCCTTAATGAACG ]
[-] EMBL CD171035 [ ATAGCCGATAATCCAGCCAGAGTTCCACGTCTGTCTACACGAGATAAGTTATCACCAAGTAACAACAACGTGGAAAGAGCTGAATAAACCATTGTTACGTGGCTTCCATCATACTTTGAACGGTCCAATGTAGCTTCCTCAGGATCTGAAGAACAACCGATGAGATTTGAACCTCTGAAGCCACCTTTCTTGTCTTGGAAGTCAGAGGACAATATTTGATGAGAGTACACGAACTCTATGATTTCATTCCTATCCACAATGTCCAATGCATCTAAAAGAGCTAAGCCACTGGATGCGAAAAATAAAACGACAATCCTAGATGAGTCAAGAGAAACCATAGAATAAGGAAGTATTCCAGTGCATCTCTTAAAGTAAATCTTCAGCTTCTGCCGAACTTTATTATCAGAATCGCAGACCATTAAGTCATAATTTGATAATGCCTTAATGAACGC]
[-] EMBL CD181508 [ CATACTTTGAACGGTCCAATGTAGCTTCCTCAGGATCTGAAGAACAACCGATGAGATTTGAACCTCTGAAGCCACCTTTCTTGTCTTGGAAGTCAGAGGACAATATTTGATGAGAGTACACGAACTCTATGATTTCATTCCTGTCCACAATGTCCAATGCATCTAAAAGAGCTAAGCCACTGGATGCGAAAAATAAAACGACAATCCTAGATGAGTCAAGAGAAACCATAGAATAAGGAAGTATTCCAGTGCATCTCTTAA ]
consensusID : consensus_11053#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 370 fasta sequence
[ACGAGCTGTTTGATGACTGAAATTTGCATAGCAGTCCAACTTCATGGCCGTAAAATACTTCACATAAGATGGGCTGCGAACAAGCTCCATGACTAGAAAACGATAGTAAATACAGGAAAGAAAAACGACATCAAAATACACAAATAGATGTCAACAATTTTGCTCAACATTAATTGGATTTACTCGGAAACTTTAGCTAGATTTGTATTCATTTAACTAAAGTCTTACTTCCTCAGGATCTGAAGAACAACCGATGAGATTTGAACCTCTGAAGCCACCTTTCTTGTCTTGGAAGTCAGAGGACAATATTTGATGAGAGTACACGAACTCTATGATTTCATTCCTATCCACNATGTCCAATGCATNCTAA]
[+] EMBL CD181662 [ACGAGCTGTTTGATGACTGAAATTTGCATAGCAGTCCAACTTCATGGCCGTAAAATACTTCACATAAGATGGGCTGCGAACAAGCTCCATGACTAGAAAACGATAGTAAATACAGGAAAGAAAAACGACATCAAAATACACAAATAGATGTCAACAATTTTGCTCAACATTAATTGGATTTACTCGGAAACTTTAGCTAGATTTGTATTCATTTAACTAAAGTCTTACTTCCTCAGGATCTGAAGAACAACCGATGAGATTTGAACCTCTGAAGCCACCTTTCTTGTCTTGGAAGTCAGAGGACAATATTTGATGAGAGTACACGAACTCTATGATTTCATTCCTATCCACNATGTCCAATGCATNCTAA]
consensusID : consensus_11053#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 206 fasta sequence
[TACATCGTGCCCAGTTGTTGAATTGTCACTTGCACATAAACATGATAAGCCAGAAAGAGAAAGGTAAGTATGTAGTGGATTTTAAGACTAGCACAGACCCAAAATGTGTAACATGTGTCATCTGGTTTACCAACACGCCCATGAAATCCTTCTTCTTGTAAATTCAATAGCCATTTAATCAACAAATCGCGTGACTTGGATCCAGC]
[+] EMBL CD130855 [TACATCGTGCCCAGTTGTTGAATTGTCACTTGCACATAAACATGATAAGCCAGAAAGAGAAAGGTAAGTATGTAGTGGATTTTAAGACTAGCACAGACCCAAAATGTGTAACATGTGTCATCTGGTTTACCAACACGCCCATGAAATCCTTCTTCTTGTAAATTCAATAGCCATTTAATCAACAAATCGCGTGACTTGGATCCAGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11053#1 ------------------------------------------------------------
consensus_11053#2 ------------------------------------------------------------
consensus_11053#3 ------------------------------------------------------------
consensus_11053#0 TAACATTTATTAAGAAAGAAAAATACAATAAAAATATTTCGACTGTATAGTGGTTTAGCA 60
consensus_11053#4 ------------------------------------------------------------
consensus_11053#1 ------------------------------------------------------------
consensus_11053#2 ------------------------------------------------------------
consensus_11053#3 ------------------------------------------------------------
consensus_11053#0 CTAGCTGAAACTTGATTTCGCAAAAAATCACATTAGAAGTGATGTGCTTATTTTTTACTC 120
consensus_11053#4 ------------------------------------------------------------
consensus_11053#1 ------------------------------------------------------------
consensus_11053#2 ------------------------------------------------------------
consensus_11053#3 ------------------------------------------------------------
consensus_11053#0 CACTGAAGATGAATCTGTTTCAGACGCTGATGATATTTTTCGGGAATATTTAACTCTGGA 180
consensus_11053#4 ------------------------------------------------------------
consensus_11053#1 ------------------------------------------------------------
consensus_11053#2 ------------------------------------------------------------
consensus_11053#3 ------------------------------------------------------------
consensus_11053#0 TAAACAGTAAGAAGTTCGCCTGAATTTAGTAACTCTTGTAGGTTACGATACACGTATGAT 240
consensus_11053#4 ------------------------------------------------------------
consensus_11053#1 ------------------------------------------------------------
consensus_11053#2 ------------------------------------------------------------
consensus_11053#3 ------------------------------------------------------------
consensus_11053#0 TTGGAATCTATTGATTTTACATCGTGCCCAGTTGTTGAATTGTCACTTGCACATAAACAT 300
consensus_11053#4 ------------------------------------------------------------
consensus_11053#1 ------------------------------------------------------------
consensus_11053#2 ------------------------------------------------------------
consensus_11053#3 ------------------------------------------------------------
consensus_11053#0 GATAAGCCAGAAAGAGAAAGGTAAGTATGTAGTGGATCTGGGGTACAAAACTGGTCAGGA 360
consensus_11053#4 ------------------------------------------------------------
consensus_11053#1 ------------------------------------------------------------
consensus_11053#2 ------------------------------------------------------------
consensus_11053#3 ------------------------------------------------------------
consensus_11053#0 GTCTTTGTAAAGGCCCCAATAACATCATTCCAACATCTTGTTACAAAACGAACAGCTGAG 420
consensus_11053#4 ------------------------------------------------------------
consensus_11053#1 ------------------------------------------------------------
consensus_11053#2 ------------------------------------------------------------
consensus_11053#3 ------------------------------------------------------------
consensus_11053#0 TTCTTATCGACGAGATGGTGACAGTTTAATATTTTAAGACTAGCACAGACCCAAAATGTG 480
consensus_11053#4 ------------------------------------------------------------
consensus_11053#1 ------------------------------------------------------------
consensus_11053#2 ------------------------------------------------------------
consensus_11053#3 ------------------------------------------------------------
consensus_11053#0 TAACATGTGTCATCTGGTTTACCAACACGCCCATGAAATCCTTCTTCTTGTAAATTCAAT 540
consensus_11053#4 ------------------------------------------------------------
consensus_11053#1 ------------------------------------------------------------
consensus_11053#2 ------------------------------------------------------------
consensus_11053#3 ------------------------------------------------------------
consensus_11053#0 AGCCATTTAATCAACAAATCGCGTGACTTGGATCCAGCAGGAATAACTGATTCTAACTTA 600
consensus_11053#4 ------------------------------------------------------------
consensus_11053#1 -----------AGCAGGAATTACTGCACAGTAAGTAGCTCCAGCATGTGCTTCCAAATAC 49
consensus_11053#2 ------------------------------------------------------------
consensus_11053#3 ------------------------------------------------------------
consensus_11053#0 TCGATAAGAGACAAACTGGCTACTGCACAGTAAGTAGCTCCAGCATGTGCTTCCAAATAC 660
consensus_11053#4 ------------------------------------------------------------
consensus_11053#1 GGTAAATTGGCGAATCCACCTTGGTAAGTCTGGCATTNTGCGATGAAATCAGCAACATTT 109
consensus_11053#2 ------------------------------------------------------------
consensus_11053#3 ------------------------------------------------------------
consensus_11053#0 GGTAAATTGGCGAATCCACCTTGGTAAGTCTGGCATTTTGCGATGAAATCAGCAACATTT 720
consensus_11053#4 ------------------------------------------------------------
consensus_11053#1 TCACAATTGATAGAATCTAGTCCATCCAAAATATAACAGCTGGCAACTGCAGAAAAGACG 169
consensus_11053#2 ------------------------------------------------------------
consensus_11053#3 -----------------------ACGAGCTGTTTGATGACTGAAATTTGCATAGCAGTCC 37
consensus_11053#0 TCACAATTGATAGAATCTAGTCCATCCAAAATATAACAGCTGGCAACTGCAGAAAAGACG 780
consensus_11053#4 ------------------------------------------------------------
consensus_11053#1 AANNNNNNNNNNNNNNNNNNNG-CATATATCTCCTGCTTTGAACAACCCAGGTTCATCCG 228
consensus_11053#2 ------------------------------------------------------------
consensus_11053#3 AACTTCATGGCCGTAAAATACTTCACATAAGATGGGCTGCGAACAAGCTCCAT--GACTA 95
consensus_11053#0 AAACGCATATCAC--GTTCCCCGCATATATCTCCTGCTTTGAACAACCCAGGTTCATCCG 838
consensus_11053#4 ------------------------------------------------------------
consensus_11053#1 AACACTGCATAGCCGATAATCCAGCCAGAGTTCCACGTCTGTCTACA-CGAGATAAGTTA 287
consensus_11053#2 -----TGCATAGCCGATAATCCAGCCAGAGTTCCACGTCTGTCTACA-CGAGATAAGTTA 54
consensus_11053#3 GAAAACG-ATAGTAAATACAGGAAAGAAAAA-CGACATCAAAATACA-CAAA--TAGATG 150
consensus_11053#0 AACACTGCATAGCCGATAATCCAGCCAGAGTTCCACGTCTGTCTACA-CGAGATAAGTTA 897
consensus_11053#4 -------------------------------------------TACATCGTGCCCAGTTG 17
**** * ** *
consensus_11053#1 TCACCAAGTAACAACAACGTGGAAAGAGCTGAATAAACCATTGTTACGTGGCT------- 340
consensus_11053#2 TCACCAAGTAACAACAACGTGGAAAGAGCTGAATAAACCATTGTTACGTGGCTTCCATCA 114
consensus_11053#3 TCAACAATTTTGCTCAACATTAATTGGATTTACTCGGAAACTTTAGCTAGATTTGTATTC 210
consensus_11053#0 TCACCAAGTAACAACAACGTGGAAAGAGCTGAATAAACCATTGTTACGTGGCTTCCATCA 957
consensus_11053#4 TTGAATTGTCACTTGCACATAAACATGATAAGCCAGAAAGAGAAAGGTAAGTATGTAGTG 77
* * ** * *
consensus_11053#1 --------------------AGCTTCCTCAGGATCTGAAGAACAACCGATGAGATTTG-- 378
consensus_11053#2 TACTTTGAACGGTCCAATGTAGCTTCCTCAGGATCTGAAGAACAACCGATGAGATTTG-- 172
consensus_11053#3 ATTTAACTAAAGTC-----TTACTTCCTCAGGATCTGAAGAACAACCGATGAGATTTG-- 263
consensus_11053#0 TACTTTGAACGGTCCAATGTAGCCTTGAGCGGATCTGAAGAACAACCGATGAGATTTG-- 1015
consensus_11053#4 GATT--TTAAGACTAG----CACAGACCCAAAATGTGTAACATGTGTCATCTGGTTTACC 131
* ** ** * * ** * ***
consensus_11053#1 AAC-CTCTGAAGCCACCTTTCTTGTCTTGGAAGTCAGAGGACAATATTTGATGAGAGTAC 437
consensus_11053#2 AAC-CTCTGAAGCCACCTTTCTTGTCTTGGAAGTCAGAGGACAATATTTGATGAGAGTAC 231
consensus_11053#3 AAC-CTCTGAAGCCACCTTTCTTGTCTTGGAAGTCAGAGGACAATATTTGATGAGAGTAC 322
consensus_11053#0 AAC-CTCTGAAGCCACCTTTCTTGTCTTGGAAGTCAGAGGACAATATTTGATGAGAGTAC 1074
consensus_11053#4 AACACGCCCATGAAATCCTTCT--TCTTGTAAATTCAATAGC--CATTTAATCA------ 181
*** * * * * * * **** ***** ** * * * **** ** *
consensus_11053#1 ACGAACTCTATGATTTCATTCCTATCCACAATGTCCAATGCATCTAAAAGAGCTAAGCCA 497
consensus_11053#2 ACGAACTCTATGATTTCATTCCTATCCACAATGTCCAATGCATCTAAAAGAGCTAAGCCA 291
consensus_11053#3 ACGAACTCTATGATTTCATTCCTATCCACNATGTCCAATGCATNCTAA------------ 370
consensus_11053#0 ACGAACTCTATGATTTCATTCCTATCCACAATGTCCAATGCATCTAAAAGAGCTAAGCCA 1134
consensus_11053#4 ACAAATCGCGTGACTTGGATCCAGC----------------------------------- 206
** ** *** ** ***
consensus_11053#1 CTGGATGCGAAAAATAAAACGACAATCCTAGATGAGTCAAGAGAAACCATAGAATAAGGA 557
consensus_11053#2 CTGGATGCGAAAAATAAAACGACAATCCTAGATGAGTCAAGAGAAACCATAGAATAAGGA 351
consensus_11053#3 ------------------------------------------------------------
consensus_11053#0 CTGGATGCGAAAAAT----CCTCGTGCCGAATTCTGGCCCGAG----------------- 1173
consensus_11053#4 ------------------------------------------------------------
consensus_11053#1 AGTATTCCAGTGCATCTCTTAAAGTAAATCTTCAGCTTCTGCCGAACTTTATTATCAGAA 617
consensus_11053#2 AGTATTCCAGTGCATCTCTTAAAGTAAATCCTCAGCTTCTGCCGAACTTTATTATCAGAA 411
consensus_11053#3 ------------------------------------------------------------
consensus_11053#0 ------------------------------------------------------------
consensus_11053#4 ------------------------------------------------------------
consensus_11053#1 TCA----------------------------------------- 620
consensus_11053#2 TCACAGACCATTAAGTCATAATTTGATAATGCCTTAATGAACGC 455
consensus_11053#3 --------------------------------------------
consensus_11053#0 --------------------------------------------
consensus_11053#4 --------------------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||