cluster # 11055

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Schistosoma mansoni
cluster # 11055 cluster # 11055 Sequences # 30 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11055#0 length = 560 sequences # 9
consensus_11055#1 length = 511 sequences # 9

consensus_11055#2 length = 454 sequences # 7
consensus_11055#3 length = 356 sequences # 5

consensusID : consensus_11055#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 560
fasta sequence

                              [CTCCAGGCCAAAAATTCGGTACCA-ACTGACCGCGTGTTTCACAAGTTTTCCAGCTTGGACAATGTTACTCCCACTAGCAACTCGGAATAGTATATTTGAGAAGGTTATTCAAGATGGTGTGCTAACAGCAAGAAACGATACCCGACCATGCTACAATCATCCGACAATCAACGTTCGAAATCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGCGTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCATTTCCATGGAGGTTATGGTAGAGGTCGACCTATGTAAATATCTCTTAATACATTGA]

[+] EMBL CD079519             [CTCCAGGCCAAAAATTCGGCACGAGGCTGACCGCGTGTTT ACAAGTTTTCCAGCTTGGACAATGTTACTCCCACTAGCAACTCGGAATAGTATATTTGAGAAGGTTATTCAAGATGGTGTGCTAACAGCAAGAAACGATACCCGACCATGCTACAATCATCCGACAATCAACGTTCGAAATCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGCGTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCATTTCCATGGAGGTTATGGTAGAGGTCGACCTATGTAAATATCTCTTAATACATTGA]
[+] EMBL CD135131             [                  tTACCA ACTGACCGCGTGTTTCACAAGTTTTCCAGCTTGGACAATGTTACTCCCACTAGCAACTCGGAATAGTATATTTGAGAAGGTTATTCAAGATGGTGTGCTAACAGCAAGAAACGATACCCGACCATGCTACAATCATCCGACAATCAACGTTCGAAATCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGCGTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCATTTCCATGGAGGTTATGGTAGA                                  ]
[-] EMBL CD135117             [                   TACCA ACTGACCGCGTGTTTCACAAGTTTTCCAGCTTGGACAATGTTACTCCCACTAGCAACTCGGAATAGTATATTTGAGAAGGTTATTCAAGATGGTGTGCTAACAGCAAGAAACGATACCCGACCATGCTACAATCATCCGACAATCAACGTTCGAAATCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGCGTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCATTTCCATG                                                ]
[-] EMBL CD159806             [                   TACCA ACTGACCGCGTGTTTCACAAGTTTTCCAGCGTGGACAATGTTACTCCCACTAGCAACTCGGAATAGTATATTTGAGAAGGTTATTCAAGATGGTGTGCTAACAGCAAGAAACGATACCCGACCATGCTACAATCATCCGACAATCAACGTTCGAAATCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGT                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD200467             [                   TACCA ACTGACCGCGTGTTTCACAAGTTTTCCAGCTTGGACAATGTTACTCCCACTAGCAACTCGGAATAGTATATTTGAGAAGGTTATTCAAGATGGTGTGCTAACAGCAAGAAACGATACCCGACCATGCTACA                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD197255             [                                                                                                                                                GACCATGCTACAATCATCCGACAATCAACGTTCGAAATCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGCGTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCATTTCCATGGAGGTTATGGTAGAGGTCGACCT                         ]
[-] EMBL CD141896             [                                                                                                                                                GACCATGCTACAATCATCCGACAATCAACGTTCGAAATCTNTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGCCCTTCTGATGGTCGTGTCGCGTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCATTTCCATGGAG                                             ]
[+] EMBL CD135212             [                                                                                                                                                                   GACAATCAACGTTCGAAATCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGCGTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCATTTCCATGGAGGTT                                          ]
[+] EMBL CD135080             [                                                                                                                                                                    ACAATCAACGTTCGAAATCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGCGTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCATTTCCATGGAGGTTA                                         ]




>consensus_11055#0
CTCCAGGCCAAAAATTCGGTACCAACTGACCGCGTGTTTCACAAGTTTTCCAGCTTGGAC
AATGTTACTCCCACTAGCAACTCGGAATAGTATATTTGAGAAGGTTATTCAAGATGGTGT
GCTAACAGCAAGAAACGATACCCGACCATGCTACAATCATCCGACAATCAACGTTCGAAA
TCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTA
CTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGT
CTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCG
AACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGC
GTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGC
AGCTATTGGTGATAGCGAGGTTCATTTCCATGGAGGTTATGGTAGAGGTCGACCTATGTA
AATATCTCTTAATACATTGA

consensusID : consensus_11055#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 511
fasta sequence

                              [CCTAGTGATTGTCCTGGACAAGTTTTCCAGCTTGGACAATGTTACTCCCACTAGCAACTCGGAATAGTATATTTGAGAAGGTTATTCAAGATGGTGTGCTAACAGCAAGAAACGATACCCGACCATGCTACAATCATCCGACAATCAACG-TTCGAAATCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGC-GTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCATTTCCATGNGAATATCTCTTAATACATTGA]

[+] EMBL CD189950             [CCTAGTGATTGTCCTGGACAAGTTTTCCAGCTTGGACAATGTTACTCCCACTAGCAACTCGGAATAGTATATTTGAGAAGGTTATTCAAGATGGTGTGCTAACAGCAAGAAACGATACCCGACCATGCTACAATCATCCGACAATCAACG TTCGAAATCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGA                                                                                                                                                                              ]
[-] EMBL CD192951             [                                                CACTAGCAACTCGGAATAGTATATTTGAGAAGGTTATTCAAGATGGTGTGCTAACAGCAAGAAACGATACCCGACCATGCTACAATCATCCGACAATCAACG TTCGAAATCTTTATGTCACCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGC GTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCATTTCCATG                      ]
[-] EMBL CD141143             [                                                                                                            GAAACGATACCCGACCATGCTACAATCATCCGACAATCAACGTTTCGAAATCTNTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGC GTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCATTTCCAT                       ]
[-] EMBL CD156186             [                                                                                                                    ACCCGACCATGCTACAATCATCCGACAATCAACG TTCGAAATCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGC GTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCATTTCCATG                      ]
[+] EMBL CD135205             [                                                                                                                                      CATCCGACAATCAACG TTCGAAATCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGGGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGC GTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCATTTCCAT                       ]
[+] EMBL CD135272             [                                                                                                                                                 CAACG TTCGAAATCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGGCTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGCGGTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCATTTCCAT                       ]
[+] EMBL CD156407             [                                                                                                                                                                                         ATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGC GTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCATTTCCAT                       ]
[-] EMBL CD156515             [                                                                                                                                                                                          TTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGC GTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCATTTCCATG                      ]
[+] EMBL CD080935             [                                                                                                                                                                                                                    ACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGC GTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCATTTCCATGNGAATATCTCTTAATACATTGA]




>consensus_11055#1
CCTAGTGATTGTCCTGGACAAGTTTTCCAGCTTGGACAATGTTACTCCCACTAGCAACTC
GGAATAGTATATTTGAGAAGGTTATTCAAGATGGTGTGCTAACAGCAAGAAACGATACCC
GACCATGCTACAATCATCCGACAATCAACGTTCGAAATCTTTATGTCATCAAGACAATGC
GATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGT
TCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAA
TTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATC
AAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGCGTTTAGAAGAGGACCGGTCACTC
CTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTC
ATTTCCATGNGAATATCTCTTAATACATTGA

consensusID : consensus_11055#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 454
fasta sequence

                              [TTTCTCTGTGTAGATTTTCCAGCTTGGACAATGTTACTCCCACTAGCAACTCGGAATAGTATATT-TGAGAAGGTTATTCAAGATGGTGTGCTAACAGCAAGAAACGATACCCGACCATGCTACAATCATCCGACAATCAACGTTCGAAATCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGCGTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTA]

[+] EMBL CD111752             [TTTCTCTGTGTAGATTTTCCAGCTTGGACAATGTTACTCCCACTAGCAACTCGGAATAGTATATT TGAGAAGGTTATTCAAGATGGTGTGCTAACAGCAAGAAACGATACCCGACCATGCTACAATCATCCGACAATCAACGTTCGAAATCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGCGTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTA]
[+] EMBL CD133275             [                                                       ATAGTATATTGTGAGAAGGTTATTCAAGATGGTGTGCTAACAGCAAGAAACGATACCCGACCATGCTACAATCATCCGACAATCAACGTTCGAAATCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGA                                                                                                                            ]
[+] EMBL CD135292             [                                                                                          GCTAACAGCAAGAAACGATACCCGACCATGCTACAATCATCCGACAATCAACGTTCGAAATCTTTATGTCATCAAGACAATGCGATCATT AAATCTCGGAGAT TGTTCGa                                                                                                                                                                                                                                                             ]
[+] EMBL CD135277             [                                                                                                         attgcCCCGAC  TTCTACAAT ATCCGACAAT AACGTTCGAAATCTTTATGTC TCAAGAC ATGCGATCATTAAAATCTCGA GNTATGTTCGTGAACAGTACTCTTGGAG ACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGGGAGGTCT                                                                                                                                                                                       ]
[+] EMBL CD192934             [                                                                                                                      ctCTACAATCATCCGACAATCAACGTTCGAAATCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGG                                                                                               ]
[+] EMBL CD063835             [                                                                                                                          ACAATCATCCGACAATCAACGTTCGAAATCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGCGTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGC                            ]
[+] EMBL CD061881             [                                                                                                                                                    AATCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGCGTTTAGAAGAGGACCGGTCACTCCTGGAGTGA                                 ]




>consensus_11055#2
TTTCTCTGTGTAGATTTTCCAGCTTGGACAATGTTACTCCCACTAGCAACTCGGAATAGT
ATATTTGAGAAGGTTATTCAAGATGGTGTGCTAACAGCAAGAAACGATACCCGACCATGC
TACAATCATCCGACAATCAACGTTCGAAATCTTTATGTCATCAAGACAATGCGATCATTA
AAATCTCGAGGATATGTTCGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACG
ACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCT
ACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGA
CAGCGTGGTCCTTCTGATGGTCGTGTCGCGTTTAGAAGAGGACCGGTCACTCCTGGAGTG
ACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTA

consensusID : consensus_11055#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 356
fasta sequence

                              [CTCCAGGCCAANAATTTGGCACGAGGGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGCGTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCATTTCCATGGAGGTTATGGTAGAGGTCGACCTATGTAAATATCTCTTAATACATTGA]

[+] EMBL CD081060             [CTCCAGGCCAANAATTTGGCACGAGGGTGAACAGTACTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGCGTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCATTTCCATGGAGGTTATGGTAGAGGTCGACCTATGTAAATATCTCTTAATACATTGA]
[-] EMBL CD141155             [                                              ACATACTATTTGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGCGTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCATTTCCAT                                                 ]
[-] EMBL CD135273             [                                                              TTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGCGTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCATTTCCATG                                                ]
[-] EMBL CD141101             [                                                                         GGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGCGTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCATTTCCAT                                                 ]
[-] EMBL CD146679             [                                                                                     aTGCGTGAGGTCGTGCCCTTACCTTCTGACATAATTCCAGCTACTTTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCAAGCTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGCGTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTC                                                         ]




>consensus_11055#3
CTCCAGGCCAANAATTTGGCACGAGGGTGAACAGTACTCTTGGAGAACATACTATTGGTT
CCTTACGACTGATGGAATTAATTATTTGCGTGAGGTCTTGCACTTACCTTCTGACATAAT
TCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCGAACACCAGCTGCAGGAATGGATCA
AGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGCGTTTAGAAGAGGACCGGTCACTCC
TGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGCAGCTATTGGTGATAGCGAGGTTCA
TTTCCATGGAGGTTATGGTAGAGGTCGACCTATGTAAATATCTCTTAATACATTGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11055#1      ---------------------CCTAGTGATTGTCC--TGGACAAGTTTTCCAGCTTGGAC 37
consensus_11055#2      -----------------------------TTTCTC--TGTGTAGATTTTCCAGCTTGGAC 29
consensus_11055#0      CTCCAGGCCAAAAATTCGGTACCAACTGACCGCGTGTTTCACAAGTTTTCCAGCTTGGAC 60
consensus_11055#3      ------------------------------------------------------------
                                                                                   

consensus_11055#1      AATGTTACTCCCACTAGCAACTCGGAATAGTATATTTGAGAAGGTTATTCAAGATGGTGT 97
consensus_11055#2      AATGTTACTCCCACTAGCAACTCGGAATAGTATATTTGAGAAGGTTATTCAAGATGGTGT 89
consensus_11055#0      AATGTTACTCCCACTAGCAACTCGGAATAGTATATTTGAGAAGGTTATTCAAGATGGTGT 120
consensus_11055#3      ------------------------------------------------------------
                                                                                   

consensus_11055#1      GCTAACAGCAAGAAACGATACCCGACCATGCTACAATCATCCGACAATCAACGTTCGAAA 157
consensus_11055#2      GCTAACAGCAAGAAACGATACCCGACCATGCTACAATCATCCGACAATCAACGTTCGAAA 149
consensus_11055#0      GCTAACAGCAAGAAACGATACCCGACCATGCTACAATCATCCGACAATCAACGTTCGAAA 180
consensus_11055#3      ------------------------------------------------------------
                                                                                   

consensus_11055#1      TCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTA 217
consensus_11055#2      TCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTA 209
consensus_11055#0      TCTTTATGTCATCAAGACAATGCGATCATTAAAATCTCGAGGATATGTTCGTGAACAGTA 240
consensus_11055#3      --------------------CTCCAGGCCAANAATTT----GGCACGAGGGTGAACAGTA 36
                                             * *     * *** *    *  * *   **********

consensus_11055#1      CTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGT 277
consensus_11055#2      CTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGT 269
consensus_11055#0      CTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGT 300
consensus_11055#3      CTCTTGGAGAACATACTATTGGTTCCTTACGACTGATGGAATTAATTATTTGCGTGAGGT 96
                       ************************************************************

consensus_11055#1      CTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCG 337
consensus_11055#2      CTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCG 329
consensus_11055#0      CTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCG 360
consensus_11055#3      CTTGCACTTACCTTCTGACATAATTCCAGCTACTCTTAAAGCTCCACCTCGGGATATTCG 156
                       ************************************************************

consensus_11055#1      AACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGC 397
consensus_11055#2      AACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGC 389
consensus_11055#0      AACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGC 420
consensus_11055#3      AACACCAGCTGCAGGAATGGATCAAGGTGGACAGCGTGGTCCTTCTGATGGTCGTGTCGC 216
                       ************************************************************

consensus_11055#1      GTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGC 457
consensus_11055#2      GTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGC 449
consensus_11055#0      GTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGC 480
consensus_11055#3      GTTTAGAAGAGGACCGGTCACTCCTGGAGTGACTGGCTTCGGTACTCCCGGTAAAGATGC 276
                       ************************************************************

consensus_11055#1      AGCTATTGGTGATAGCGAGGTTCATTTCCATGNGAATATCTCTTAATACATTGA------ 511
consensus_11055#2      AGCTA------------------------------------------------------- 454
consensus_11055#0      AGCTATTGGTGATAGCGAGGTTCATTTCCATGGAGGTTATGGTAGAGGTCGACCTATGTA 540
consensus_11055#3      AGCTATTGGTGATAGCGAGGTTCATTTCCATGGAGGTTATGGTAGAGGTCGACCTATGTA 336
                       *****                                                       

consensus_11055#1      --------------------
consensus_11055#2      --------------------
consensus_11055#0      AATATCTCTTAATACATTGA 560
consensus_11055#3      AATATCTCTTAATACATTGA 356