These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11057#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1614 fasta sequence [GCTTTTCGTTTCGAACCGGAAGTTCTTGGCGTGATTTCGACGTATGTTGGATTTCTGCTGCTTTCGTCTGAAAGTTTTTGTGTATTTTGCTGTTCATTACTTTCGACCAATTGACAAATTCATCTAGCTATCTAGTAACGTTTTCCAAAACCTTGTCATGCACAATGAACGCCGCAGTTTCAGATCAAATCTAGATTCTAATCTATCAGATACTATTCGAGTAGTAGCCTGCAAACAAAATCAAGACTTACAAATCACTTTCGCTAATGATTATGCGTGTTCAGACAGACCAAGACCTACCGGTAGCAAAATAGCATATTCTGCTTCAGGCTCAGGATTACGAGATACCAATGCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGAAAATGATGCCACTTTTGTCGCAACTCCCATGGATTCGCATACTCAAGTCAGTTACGGACATGTTAACAGGCGTCCATCCGGCAATAAATCAGAATTTGATTATCAAAATAATTGTTGTCCTACACACGGCATGCTTTCCATGATTAAGGATCAAGAGCCATATAATCGTGAC-TGATGACT-CAGTGAGAAATAAATCGGGCTTTGTTTCTGGCTAATCCACCTACATCCGTTTTAGCTAGTCGTATTCGTGGCCGCGGTTATAATAATAATATAGCCCATGATTGCCGGCGAATAGATATACAAAAGAATTCTTTAAACCAACCTATACTAAATGGATCACGTATGGATCGTTCAACAATTTTTCGATCGACATCAGATCAACAGCGTAGTGTTTTCCCATCCAAATCAATGAAAGAGCGTGGATTTTACAATTTAAATTCTGAACATGACCAGTCGGGAAGTCTTGTCCAAAAATTCTCGTGGCCTTACGCGACATTCGCGAGTTCACTTTCAGAATAATTTTCGTCGTGGACAAGGTTCAAGACAATACTGGGGTCATGATGATAGATTTGGAATTCATGAGAATACTCCAGGGATTCGTGTTCAAAATTCTTTTCACAATGGAGATTTTAAAAGTCGTCACCATTCTGGTGATGAATATATTGATGATTTAACCCCAGAGGATATTGCAAAATACAAACTAGAAATCAATATGGATAAACAACCACGCTCTCTAAATCATCATTATCAACATCAACACCGACCACATCATCATTACTACAATCATCCCAATAATCGTTATCATCCACCTCATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGGTTACAATACTAGGCAATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAAACAATGATAAAATTCCAGTGAGCGAAATGAACATTAGTGAGGACAGTCAAGTTGGTACTGATGAACCTATTCAAACAAACGATCCTACTGAAGATTCCCCATATTTCGAGCTCGACTTTGCTAGCGGAATTTTCGACGTACAAATTCACGAGAGGGCTAGATTCTTTTTAACTTTACGTATCGATGACAGTGAGCTTTCTCAAAATGATTG] [+] EMBL CD116861 [GCTTTTCGTTTCGAACCGGAAGTTCTTGGCGTGATTTCGACGTATGTTGGATTTCTGCTGCTTTCGTCTGAAAGTTTTTGTGTATTTTGCTGTTCATTACTTTCGACCAATTGACAAATTCATCTAGCTATCTAGTAACGTTTTCCAAAACCTTGTCATGCACAATGAACGCCGCAGTTTCAGATCAAATCTAGATTCTAATCTATCAGATACTATTCGAGTAGTAGCCTGCAAACAAAATCAAGACTTACAAATCACTTTCGCTAATGATTATGCGTGTTCAGACAGACCAAGACCTACCGGTAGCAAAATAGCATATTCTGC TCAGGCTCAGGATTACGAGATACCAATGCTCACAAAATGCAGCGTCAGGCAGTCATTTCAG ] [+] EMBL CD090100 [ CTTTTCGTTTCGAACCGGAAGTTCTTGGCGTGATTTCGACGTATGTTGGATTTCTGCCGCTTTCGTCTGAAAGTTTTTGTGTATTTTGCTGTTCATTACTTTCGACCAATTGACAAATTCATCTAGCTATCTAGTAACGTTTTCCAAAACCTTGTCATGCACAATGAACGCCGCAGTTTCAGATCAAATCTAGATTCTAATCTATCGGATACTATTCGAGTAGTAGCCTGCAAACAAAATCAAGACTTACAAATCACTTTCGCTAATGATTATGCGTGTTCAGACAGACCAAGACCTACCGGTAGCAAAATAGCATATTCTGCTTCAGGCTCAGGATTACGAGATACCAATGCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGGAAATGATGCCACTTTTGTCGCAACTCCCATGGATTCGCATACTCAAGTCAGTTACGGACATGTTAACAGGCGTCCATCCGG ] [-] EMBL CD198023 [ TCAAATCTAGATTCTAATCTATCAGATACTATTCGAGTAGTAGCCTGCAAACAAAATCAAGACTTACAAATCACTTTCGCTAATGATTATGCGTGTTCAGACAGACCAAGACCTACCGGTAGCAAAATAGCATATTCTGCTTCAGGCTCAGGATTACGAGATACCAATGCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGAAAATGATGCCACTTTTGTCGCAACTCCCATGGATTCGCATACTCAAGTCAGTTACGGACATGTTAACAG ] [-] EMBL CD059639 [ GCAAAATAGCATATTCTGCTTCAGGCTCAGGATTACGAGATTCCAATGCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGGCCTCAACATAATAGAAACTATGAAAATGATGCCACTTTTGTTGCAACTCCCATGGATTCGCATACTCAAGACAGTTACGGACATGTTAACAGGGGTCCATCCGGCAATAAATCAGAATTTGATTATCAAAATAATTGTTGTCCTACACACGGCATGCTTTCCATGATTAAGGATCAAGAGCCATATAATCGTGAC TGATGACTGCAGTGAGAAAT ] [+] EMBL CD092611 [ agggACGAGATACCAATGCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGAAAATGATGCCACTTTTGTCGCAACTCCCATGGATTCGCATACTCAAGTCAGTTACGGACATGTTAACAGGCGTCCATCCGGCAATAAATCAGAATTTGATTATC ] [+] EMBL CD092632 [ GCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGAAAATGATGCCACTTTTGTCGCAACTCCCATGGATTCGCATACTCAAGTCAGTTACGGACATGTTAACAGGCGTCCATCCGGCAATAAATCAGAATTTGATTATC ] [+] EMBL CD092553 [ GCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGAAAATGATGCCACTTTTGTCGCAACTCCCATGGATTCGCATACTCAAGTCAGTTACGGACATGTTAACAGGCGTCCATCCGGCAATAAATCAGAATTTGATTATC ] [+] EMBL CD092569 [ GCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGAAAATGATGCCACTTTTGTCGCAACTCCCATGGATTCGCATACTCAAGTCAGTTACGGACATGTTAACAGGCGTCCATCCGGCAATAAATCAGAATTTGATTATC ] [+] EMBL CD059329 [ CCATCCGGCAATAAATCAGAATTTGATTATCAAAATAATCGTCGTCCTACACACGGCATGCATTCCATGATTAAGGATCAAGAGCAATATAATCGTGACTTGATGACT CAGTGTGAAATAAATCGGGCTTTGTTTCTGGCTAATCCACCTACATCCGTTTTAGCTAGTCGTATTCGTGGCCGCGGTTATAATAATAATATAGCCCATGATTGCCGGCGAATAGATATACAAAAGAATTCTTTAAACCAACCTATACTAAATGGATCACGTATGGATCGTTCAACAATTTTTCGATCGACATCAGATCAACAGCGTAGTGTTTTCCCATCCAAATCAATGAAAGAGCGTGGATTTTACAATTTAAATTCTGAACATGACCAGTCGGGAAGTCTTGTCCAAAAATTCTCGTGGCCTTACGCGACATTCGCGAGTTCACTTTCAGAATAATTTTCGTCGTGGACAAGGGTCAAGACAATACTGGGGTCATGATGATAGATTTGGAATTCATGAGAATACTCCAGGGATTCGTGTTCAAAATTCTTTTCACAATGGAGATTTTAAAAGTCGTCACCATTCTGGTGATGAATATATTGATGATTTAACCCCAGA GATATTGCGCAATACAAACTAGAAATCAATATGGATAAACAACCACGCTCTCTAAATCATCAT ] [-] EMBL BG930985 [ TTCTTCGATCGACATCAGATCGACAGCGTAGTGTTTCCCCATCGTAATCAATGAAAGAGCGTGGATTTTACAATTTAGATTCTGAACATGA CAGTCGGGAAGTCTTGTCCACAAATTCTCGTGGCCTTACGCGACATTCGCGAGTTCACTTTCAGAATAATTTTCGTCGTGGACAAGGTTCAAGACTATACTGGGGTCATGATG ] [+] EMBL AI068008 [ TTCAAGACAATACTGGGGTCATGATGATAGATTTGGAATTCATGAGAATACTCCAGGGATTCGTGTTCAAAATTCTTTTCACAATGGCGATTTTAAAAGTCGTCACCATTCTGGTGATGAATATATTGATGATTTAACCCCAGAGGATATTGCAAAATACAAACTAGAAATCAATATGGATAAACAACCACGCTCTCTAAATCATCATTATCAACATCAACACCGACCACATCATCATTACTACAATCATCCCAATAATCGTTATCATCCACCTCATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGGTTACAATACTAGGCAATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAAACAATGATAAAATTCCAGTGAGCGAAATGAACATTAGTGAGGACAGTCAAGTTGGTACTGATGAACCTATTCA ] [+] EMBL AI067740 [ ACAATACTGGGGTCATGATGATAGATTTGGAATTCATGAGAATACTCCAGGGATTCGTGTTCAAAATTCTTTTCACAATGGAGATTTTAAAAGTCGTCACCATTCTGGTGATGAATATATTGATGATTTAACCCCAGAGGATATTGCAAAATACAAACTAGAAATCAATATGGATAAACAACCACGCTCTCTAAATCATCATTATCAACATCAACACCGACCACATCATCATTACTACAATCATCCCAATAATCGTTATCATCCACCTCATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGGTTACAATACTAGGCAATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAAACAATG ] [+] EMBL AI068347 [ ACAATACTGGGGTCATGATGATAGATTTGGAATTCATGAGAATACTCCAGGGATTCGTGTTCAAAATTCTTTTCACAATGGAGATTTTAAAAGTCGTCACCATTCTGGTGATGAATATATTGATGATTTAACCCCAGAGGATATTGCAAAATACAAACTAGAAATCAATATGGATAAACAACCACGCTCTCTAAATCATCATTATCAACATCAACACCGACCACATCATCATTACTACAATCATCCCAATAATCGTTATCATCCACCTCATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGGTTACAATACTAGGCAATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAAACAAT ] [+] EMBL AI067851 [ ACAATACTGGGGTCATGATGATAGATTTGGAATTCATGAGAATACTCCAGGGATTCGTGTTCAAAATTCTTTTCACAATGGAGATTTTAAAAGTCGTCACCATTCTGGTGATGAATATATTGATGATTTAACCCCAGAGGATATTGCAAAATACAAACTAGAAATCAATATGGATAAACAACCACGCTCTCTAAATCATCATTATCAACATCAACACCGACCACATCATCATTACTACAATCATCCCAATAATCGTTATCATCCACCTCATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGGTTACAATACTAGGCAATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAAACAA ] [+] EMBL AI067370 [ ACAATACTGGGGTCATGATGATAGATTTGGAATTCATGAGAATACTCCAGGGATTCGTGTTCAAAATTCTTTTCACAATGGAGATTTTAAAAGTCGTCACCATTCTGGTGATGAATATATTGATGATTTAACCCCAGAGGATATTGCAAAATACAAACTAGAAATCAATATGGATAAACAACCACGCTCTCTAAATCATCATTATCAACATCAACACCGACCACATCATCATTACTACAATCATCCCAATAATCGTTATCATCCACCTCATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGGTTACAATACTAGGCAATATCANACTAACGAGGAAAACAAGACTAGGTGTTTCA ] [+] EMBL AI067036 [ ACAATACTGGGGTCATGATGATAGATTTGGAATTCATGAGAATACTCCAGGGATTCGTGTTCAAAATTCTTTTCACAATGGAGATTTTAAAAGTCGTCACCATTCTGGTGATGAATATATTGATGATTTAACCCCAGAGGATATTGCAAAATACAAACTAGAAATCAATATGGATAAACAACCACGCTCTCTAAATCATCATTATCAACATCAACACCGACCACATCATCATTACTACAATCATCGCAATAATCGTTATCATCCGACTCATCAGTAACAAACTCAGGAGAAGTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTC ] [+] EMBL AI067962 [ ACAATACTGGGGTCATGATGATAGATTTGGAATTCATGAGAATACTCCAGGGATTCGTGTTCAAAATTCTTTTCACAATGGAGATTTTAAAAGTCGTCACCATTCTGGTGATGAATATATTGATGATTTAACCCCAGAGGATATTGCAAAATACAAACTAGAAATCAATATGGATAAACAACCACGCTCTCTAAATCATCATTATCAACATCAACACCGACCAGATCATCATTACTAGAATCATCCCAATAATCGTTATCATCCACCTCATCATAAACAACCTCAAAAGAATTATTCGAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGGTTACAATACTAGGCAATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAAACAATGATAAAATTCCAGTGAGCGAAATGAACATTAGTGAGGACAGTCAAGTTGGTACTGATGAACCTATTCAAACAAACGATCCTACTGAAGATTCCCCATATTTCGAGCTCGACTTTGCTAGCGGAATTTTCGACGTACAAATTCACGAGAGGGCTAGATTCTTTTTAACTTTACGTATCGATGACAGTGAGCTTTCTCAAAATGATTG] [+] EMBL CD161981 [ attttgtccAATCATCATTATCAACATCAACACCGACCACATCATCATTACTACAGTCATCCCAATAATCGTTATCATCCACCTCATCATAAACAACCTCAAAGGAATTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGG ] [+] EMBL CD060928 [ CAACATCAACACCGACCACATCATCATTACTACAATCATCCCAATAATCGTTATCATCCGCCTCATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGGTTACAATACTAGGCAATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAAACAATGATAAAATTCCAGTGAGCGAAATGAACATTAGTGAGGACAGTCAAGTTGGTACTGATGAACCTATTCAAACAAACGATCCTACTGAA ] consensusID : consensus_11057#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 975 fasta sequence [GAGGGCCAAAATTCGGCACGAGGCGTTATCATCCACCTCATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGGTTACAATACTAGGCAATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAAACAATGATAAAATTCCAGTGAGCGAAATGAACATTAGTGAGGACAGTCAAGTTGGTACTGATGAACCTATTCAAACAAACGATCCTACTGAAGATTCCCCATATTTCGAGCTCGACTTTGCTAGCGGAATTTTCGACGTACAAATTCACGAGAGGGCTAGATC-TTTTTTAACTTTAGGTATCGATGACAGTGAGCTTTCTCAAAATGATTGTTACACAAATATATCTGAATTAAGTACGCACGGAATGCATCGAAGTCATTCTCTTCCATCGTTAAGAGACTTGGAAAGAAATTACCAACTACATTCATTTGAGGACTGTACTACACCCACAACCAGCCTTAATACTGGAGGAATTGAAGATTTATCAACAAAAATTAAAGCAGCGACTATCTCAGTAGAAACGACATATATAAAATCTGAAAAT-AACGTAAATGTATCGAGTGC-AAGTGTTTGTGGTAGTGATGTAGCACAAGAATGCAATAATATGGAGGACGAAAATCGACGATAACGCAATGATCTCGCAAAAATGTAATGTTTGAGTAGTCTATGGATTGGATCACTAACAGTCAAATGTATAGCTTAATTGTTTCACTTTACCTCTTCTTAGATTTTTTACTTGTATGACTTCGAAAATGTTTTTACTTATTTATTGTTATGACATCGCCTTAACTGTAATGAGATACTTCACTTGCTCCTTTGTGATTACGGATTAACTTGATTAATGATATAGTTTTCTATGATAAATTTATTGATAAATGAAAGGC] [+] EMBL CD082927 [GAGGGCCAAAATTCGGCACGAGGCGTTATCATCCACCTCATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGGTTACAATACTAGGCAATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAAACAATGATAAAATTCCAGTGAGCGAAATGAACATTAGTGAGGACAGTCAAGTTGGTACTGATGAACCTATTCAAACAAACGATCCTACTGAAGATTCCCCATATTTCGAGCTCGACTTTGCTAGCGGAATTTTCGACGTACAAATTCACGAGAGGGCTAGATC TTTTTTAACTTTAGGTATCGATGACAGTGAGCTTTCTCAAAATGATTGTTACACAAATATATCTGAATTAAGTACGCACGGAATGCATCGAAGTCATTCTCTTCCATCGTTAAGAGACTTGGAAAGAAATTACCAACTACATTCATTTGAGGACTGTACTACACCCACAACCAGCCTTAATACTGGAGGAATTGAAGATTTATCAACAAAAATTAAAGCAGCGACTATCTCAGTAGAAACGACATATATAAAATCTGAAAAT AACGTAAATGTATCGAGTGCAAAGTG TTGTGGTAGT ] [+] EMBL CD083083 [ ATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGGTTACAATACTAGGCAATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAAACAATGATAAAATTCCAGTGAGCGAAATGAACATTAGTGAGGACAGTCAAGTTGGTACTGATGAACCTATTCAAACAAACGATCCTACTGAAGATTCCCCATATTTCGAGCTCGACTTTGCTAGCGGAATTTTCGACGTACAAATTCACGAGAGGGCTAGATC TTTTTTAACTTTAGGTATCGATGACAGTGAGCTTTCTCAAAATGATTGTTACACAAATATATCTGAATTAAGTACGCACGGAATGCATCGAAGTCATTCTCTTCCATCGTTAAGAGACTTGGAAAGAAATTACCAACTACATTCATTTGAGGACTGTACTACACCCACAACCAGCCTTAATACTGGAGGAATTGAAGATTTATCAACAAAAATTAAAGCAGCGACTATCTCAGTAGAAACGACATATATAAAATCTGAAAATAAACGT AATGTATCGAGTGC AAGTGTTTGTGGTAG ] [+] EMBL CD191133 [ TGTTCCACAAACAATGATAAAATTCCAGTGAGCGAAATGAACATTAGTGAGGACAGGCAAGTTGGTACTGATGAACCTATTCAAACAAACGATCCTACTGAAGATTCCCCATATTTCGAGCTCGACTTTGCTAGCGGAACTTTCGACGTACAAATTCACGAGAGGGCTAGATCTTTTTTTAACTTTAGGTATCGATGACAGTGAGCTTTCTCAAAATGATTGTTACACAAATATATCTGAATTAAGTACGCACGGAATGCATCGAAGTCATTCTCTTCCATCGTTAAGAGACTTGGAAAGAAATTACCAACTACATTCATTTGAGGACTGTACTACACCCACAACCAGCCTTAATACTGGAGGAAT ] [+] EMBL CD197074 [ TTTTTTAACTTTAGGTATCGATGACAGTGAGCTTTCTCAAAATGATTGTTACACAAATATATCTGAATTAAGTACGCACGGAATGCATCGAAGTCATTCTCTTCCATCGTTAAGAGACTTGGAAAGAAATTACCAACTACATTCATTTGAGGACTGTACTACACCCACAACCAGCCTTAATACTGGAGGAATTGAAGATTTATCAACAAAAATTAAAGCAGCGACTATCTCAGTAGAAACGACATATATAAAATCTGAAAAT AACGTAAATGTATCGAGTGC AAGTGTTTGTGGTAGTGATGTAGCACAAGAATGCAATAATATGGAGGACGAAAATCGACGATAACGCAATGATCTCGCAAAAATGTAATGTTTGAGTAGTCTATGGATTGGATCACTAACAGTCAAATGTATAGCTTAATTGTTTCACTTTACCTCTTCTTAGATTTTTTACTTGTATGACTTCGAAAA ] [-] EMBL CD076657 [ ATATATCTGAATTAAGTACGCACGGAATGCATCGAAGTCATTCTCTTCCATCGTTAAGAGACTTGGAAAGAAATTACCAACTACATTCATTTGAGGACTGTANTACACCCACAACCAGCCTTAATACTGGAGGAATTGAAGATTTATCAACAAAAATTAAAGCAGCGACTATCTCAGTAGAAACGACATATATAAAATCTGAAAAT AACGTAAATGTATCGAGTGC AAGTGTTTGTGGTAGTGATGTAGCACAAGAATGCAATAATATGGAGGACGAAAATCGACGATAACGCAATGATCTCGCAAAAATGTAATGTTTGAGTAGTCTATGGATTGGATCACTAACAGTCAAATGTATAGCTTAATTGTTTCACTTTACCTCTTCTTAGATTTTTTACTTGTATGACTTCGAAAATGTTTTTACTTATTTATTGTTATGACATCGCCTTAACTGTAATGAGATACTTCACTTGCTCCTTTGTGATTACGGATTAACTTGATTAATGATATAGTTTTCTATGATAAATTTATTGATAAATGAAAGGC] [+] EMBL CD082990 [ AATGCATCGAAGTCATTCTCTTCCATCGTTAAGAGACTTGGAAAGAAATTACCAACTACATTCATTTGAGGACTGTACTACACCCACAACCAGCCTTAATACTGGAGGAATTGAAGATTTATCAACAAAAATTAAAGCAGCGACTATCTCAGTAGAAACGACATATATAAAATCTGAAAAT AACGTAAATGTATCGAGTGC AAGTGTTTGTGGTAGTGATGTAGCACAAGAATGCAATAATATGGAGGACGAAAATCGACGATAACGCAATGATCTCGCAAAAATGTAATGTTTGAGTAGTCTATGGATTGGATCACTAACAGTCAAATGTATAGCTTAATTGTTTCACTTTACCTCTTCTTAGATTTTTTACTTGTATGACTTCGAAAATGTTTTTACTTATTTATTGTTATGACATCGCCTTAACTGTAATGAGATACTTCACTTGCTCCTTTGTGATTACGGATTAACTTGATTAATGATATAGTTTTCTATGATAAATTTATTGATAAATGAAAGG ] [-] EMBL CD076573 [ ATGCATCGAAGTCATTCTCTTCCATCGTTAAGAGACTTGGAAAGAAATTACCAACTACATTCATTTGAGGACTGTACTACACCCACAACCAGCCTTAATACTGGAGGAATTGAAGATTTATCAACAAAAATTAAAGCAGCGACTATCTCAGTAGAAACGACATATATAAAATCTGAAAAT AACGTAAATGTATCGAGTGC AAGTGTTTGTGGTAGTGATGTAGCACAAGAATGCAATAATATGGAGGACGAAAATCGACGATAACGCAATGATCTCGCAAAAATGTAATGTTTGAGTAGTCTATGGATTGGATCACTAACAGTCAAATGTATAGCTTAATTGTTTCACTTTACCTCTTCTTAGATTTTTTACTTGTATGACTTCGAAAATGTTTTTACTTATTTATTGTTATGACATCGCCTTAACTGTAATGAGATACTTCACTTGCTCCTTTGTGATTACGGATTAACTTGATTAATGATATAGTTTTCTATGATAAATTTATTGATAAATGAAAGGC] [+] EMBL CD192728 [ CCAACCTTAATACTGGAGGAATTGAAGATTTATCAACAAAAATTAAAGCAGCGACTATCTCAGTAGAAACGACATATATAAAATCTGAAAAT AACGTACATGTATCGAGTGC AAGTGTTTGTGGTAGTGATGTAGCACAAGAGTGCAATAATATGGAGGACGAAAATCGACG ] [-] EMBL CD076511 [ GCCTTAATACTGGAGGAATTGAAGATTTATCACCAAAAATTAAAGCAGCGACTATTTCAGTAGAAACGACATATATAAAATTTGAAAAT AACGTAAATGTATCGAGTGC AAGTGTTTGTGGTAGTGATGTAGCCCAAAAATGCAATAATATGGAGGGCGAAAATCGACGATAACGCAATGATTTCGCAAAAATGTAATGTTTGAGTAGTTTATGGATTGGATCCCTAACAGTCAAATGTATAGCTTAATTGTTTCCCTTTACCTCTTTTTAGATTTTTTACTTGTATGACTTCGAAAATGTTTTTACTTATTTATTGTTATGACATCCCCTTAACTGTAATGAGATACTTCCCTTGCTCCTTTGTGATTACGGATTAACTTGATTAATGAAATAGTTTTTTATGATAAATTTATTGATAAATGAAAGGC] consensusID : consensus_11057#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 569 fasta sequence [CACACGAGACCTACCGGTAGCAAAATAGCATATTCTGCTTCAGGCTCAGGATTACGAGATACCAATGCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGAAAATGATGCCACTTTTGTCGCAACTCCCATGGATTCGCATACTCAAGTCAGTTACGGACATGTTAACAGGCGTCCATCCGGCAATAAATCAGATTTCTGCTGCTTTCGTCTGAAAGTTTTTGTGTATTTTGCTGTTCATTACTTTCGACCAATTGACAAATTCATCTAGCTATCTAGTAACGTTTTCCAAAACCTTGTCATGCACAATGAACGCCGCAGTTTCAGATCAAATCTAGATTCTAATCTATCAGATACTATTCGAGTAGTAGCCTGCAAACAAAATCAAGACTTACAAATCACTTTCGCTAATGATTATGCGTGTTCAGACAGACCAAGACCTACCGGTAGCAAAATAGCATATTCTGCTTCAGGCTCAGGATTACGAGATACCAATGCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAA] [+] EMBL CD093673 [CACACGAGACCTACCGGTAGCAAAATAGCATATTCTGCTTCAGGCTCAGGATTACGAGATACCAATGCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGAAAATGATGCCACTTTTGTCGCAACTCCCATGGATTCGCATACTCAAGTCAGTTACGGACATGTTAACAGGCGTCCATCCGGCAATAAATCAGATTTCTGCTGCTTTCGTCTGAAAGTTTTTGTGTATTTTGCTGTTCATTACTTTCGACCAATTGACAAATTCATCTAGCTATCTAGTAACGTTTTCCAAAACCTTGTCATGCACAATGAACGCCGCAGTTTCAGATCAAATCTAGATTCTAATCTATCAGATACTATTCGAGTAGTAGCCTGCAAACAAAATCAAGACTTACAAATCACTTTCGCTAATGATTATGCGTGTTCAGACAGACCAAGACCTACCGGTAGCAAAATAGCATATTCTGCTTCAGGCTCAGGATTACGAGATACCAATGCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAA] [+] EMBL CD093697 [ GCAAAATAGCATATTCTGCTTCAGGCTCAGGATTACGAGATACCAATGCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGAAAATGATGCCACTTTTGTCGCAACTCCCATGGATTCGCATACTCAAGTCAGTTACGGACATGTTAACAGGCGTCCATCCGGCAATAAATCAGATTTCTGCTGCTTTCGTCTGAAAGTTTTTGTGTATTTTGCTGTTCATTACTTTCGACCAATTGACAAATTCATCTAGCTATCTAGTAACGTTTTCCAAAACCTTGTCATGCACAATGAACGCCGCAGTTTCAGATCAAATCTAGATTCTAATCTATCAGATACTATTCGAGTAGTAGCCTGCAAACAAAATCAAGACTTACAAATCACTTTCGCTAATGATTATGCGTGTTCAGACAGACCAAGACCTACCGGTAGCANAATAGCATATTCTGCTTCAGGCTCAGGTTTACGAGATACCAATGCTCACANAATGCAGCGTCAGGCAGTCATTTCAGCCCACAn] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11057#0 GCTTTTCGTTTCGAACCGGAAGTTCTTGGCGTGATTTCGACGTATGTTGGATTTCTGCTG 60 consensus_11057#2 ------------------------------------------------------------ consensus_11057#1 ------------------------------------------------------------ consensus_11057#0 CTTTCGTCTGAAAGTTTTTGTGTATTTTGCTGTTCATTACTTTCGACCAATTGACAAATT 120 consensus_11057#2 ------------------------------------------------------------ consensus_11057#1 ------------------------------------------------------------ consensus_11057#0 CATCTAGCTATCTAGTAACGTTTTCCAAAACCTTGTCATGCACAATGAACGCCGCAGTTT 180 consensus_11057#2 ------------------------------------------------------------ consensus_11057#1 ------------------------------------------------------------ consensus_11057#0 CAGATCAAATCTAGATTCTAATCTATCAGATACTATTCGAGTAGTAGCCTGCAAACAAAA 240 consensus_11057#2 ------------------------------------------------------------ consensus_11057#1 --------------------------GAGGGCCAAAATTCGGCACGAGGCGTTATCATCC 34 consensus_11057#0 TCAAGACTTACAAATCACTTTCGCTAATGATTATGCGTGTTCAGACAGACCAAGACCTAC 300 consensus_11057#2 ---------------------------------------------CACAC-GAGACCTAC 14 consensus_11057#1 ACCTCATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTATATAA 94 ** ** * ** consensus_11057#0 CGGTAGCAAAATAGCATATTCTGCTTCAGGCTCAGGATTACGAGATACCAATGCTCACAA 360 consensus_11057#2 CGGTAGCAAAATAGCATATTCTGCTTCAGGCTCAGGATTACGAGATACCAATGCTCACAA 74 consensus_11057#1 TTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGG 154 * * ** * * ** * ******* * * * consensus_11057#0 AATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGA 420 consensus_11057#2 AATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGA 134 consensus_11057#1 T-TACAATACTAGGCA---ATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAA 210 * ** ***** ** *** * * **** *** * * * * * consensus_11057#0 A-AATGATGCCACTTTTGT---CGCAACTCCCATGGATTCGCATACTCAAGTCAGTT--- 473 consensus_11057#2 A-AATGATGCCACTTTTGT---CGCAACTCCCATGGATTCGCATACTCAAGTCAGTT--- 187 consensus_11057#1 ACAATGATAAAATTCCAGTGAGCGAAATGAACATTAGTGAGGACAGTCAAGTTGGTACTG 270 * ****** * * ** ** ** *** * * * * ****** ** consensus_11057#0 ACGGACATGTT--AACAGGCG-TCCATCCGGCAATAAATCAGAATTTGA--TTATCAAAA 528 consensus_11057#2 ACGGACATGTT--AACAGGCG-TCCATCCGGCAATAAATCAGATTTCTG--CTGCTTTCG 242 consensus_11057#1 ATGAACCTATTCAAACAAACGATCCTACTGAAGATTCCCCATATTTCGAGCTCGACTTTG 330 * * ** * ** **** ** *** * * ** ** * ** consensus_11057#0 TAATTGTTGTCCTACACACGG---CATGCT---TTCCATGATTAAGGATCAAGAGCCATA 582 consensus_11057#2 T--CTGAAAGTTTTTGTGTAT---TTTGCT---GTTCATTACTTTCGACCAATTGACAAA 294 consensus_11057#1 CTAGCGGAATTTTCGACGTACAAATTCACGAGAGGGCTAGATCTTTTTTAACTTTAGGTA 390 * * * * * * * consensus_11057#0 TA-ATCGTGACTGATGACTCAGTGAGAAATAAATCGGGCTTTGTTTCTGGCTAATCCACC 641 consensus_11057#2 T---TCAT--CTAGCTATCTAGTAACGTTTT--CCAAAACCTTGTCATGCACAATGAAC- 346 consensus_11057#1 TCGATGACAGTGAGCTTTCTCAAAATGATTGTTACACAAATATATC-TGAATTAAGTACG 449 * * * * * * ** * ** consensus_11057#0 TACATCC---GTTTTAGCTAGTCGTATTCGTGGCCGC---GGTTATAATAATAATATAGC 695 consensus_11057#2 -GCCGCA---GTTTCAG---ATCAAATCTAGATTCTA---ATCTATCA-GATACTATT-C 394 consensus_11057#1 CACGGAATGCATCGAAGTCATTCTCTTCCATCGTTAAGAGACTTGGAAAGAAATTACCAA 509 * * ** ** * * * * * ** consensus_11057#0 CCATGATTGCCGGCGAATAGATATACAAAAGAATTCTTTAAACCAACCTA--TACTAAAT 753 consensus_11057#2 GAGTAGTAGCCTGCAAACA-------AAATCAAGACTTACAAATCACTTT--CGCTAAT- 444 consensus_11057#1 CTACATTCATTTGAGGACT--------GTACTACACCCACAACCAGCCTTAATACTGGAG 561 * * * * * ** * * ** consensus_11057#0 GGATCACGTATGGATCGTTCAACAATTTTTCGATCGACATCAGATCAACA-GCGTAGTGT 812 consensus_11057#2 -GATTATGCGTG-----TTCAGACAGACCAAGACC--TACCGG--TAGCA-AAATAGCAT 493 consensus_11057#1 GAATTGAAGATT---TATCAACAAAAATTAAAGCAGCGACTATCTCAGTAGAAACGACAT 618 ** * * * * * * * * consensus_11057#0 TTTCCCATCC--AAATCAATGAAAGAGCGTGGA-TTTTACAATTTAAAT-TCTGA-ACAT 867 consensus_11057#2 ATTCTGCTTC--AGGCTCAGGATTACG---AGA-TACCAATGCTCACAA-AATG---CAG 543 consensus_11057#1 ATATAAAATCTGAAAATAACGTAAATGTATCGAGTGCAAGTGTTTGTGGTAGTGATGTAG 678 * * * * * * ** * * * ** * consensus_11057#0 GACCAG---TCGGGAAG-TCTTGTCCAAAAATTCTCGTGGCCTTACGCGACATTCGCGAG 923 consensus_11057#2 CGTCAG---GCAGTCAT-TTCAGCCCACAA------------------------------ 569 consensus_11057#1 CACAAGAATGCAATAATATGGAGGACGAAAATCGACGATAACGCAATGATCTCGCAAAAA 738 ** * * * * * ** consensus_11057#0 TTCACTTTCAGAATAATTTTCGTCGTGGACAAGGTTCAAGACAATACTGGGGTCATGATG 983 consensus_11057#2 ------------------------------------------------------------ consensus_11057#1 TGTAATGTTTGAGTAGTCTATGGATTGGATCACTAACAGTCAAATGTATAGCTTAATTGT 798 consensus_11057#0 ATAGATTTGGAATTCATGAGAATACTCCAGGGATTCGTGTTCAAAATTCTTTTCACAATG 1043 consensus_11057#2 ------------------------------------------------------------ consensus_11057#1 TTCACTTTACCTCTTCTTAGATTTTTTACTTGTATGACTTCGAAAATGTTTTTACTTATT 858 consensus_11057#0 GAGATTTTAAAAGTCGTCACCATTCTGGTGATGAATATATTGATGATTTAACCCCAGAGG 1103 consensus_11057#2 ------------------------------------------------------------ consensus_11057#1 TATTGTTATGACATCGCCTTAACTGTAATGAGATACTTCACTTGCTCCTTTGTGATTACG 918 consensus_11057#0 ATATTGCAAAATACAAACTAGAAATCAATATGGATAAACAACCACGCTCTCTAAATCATC 1163 consensus_11057#2 ------------------------------------------------------------ consensus_11057#1 GATTAACTTGATTAATGATATAGTTTTCTATGATAAATTTATTGATAAATGAAAGGC--- 975 consensus_11057#0 ATTATCAACATCAACACCGACCACATCATCATTACTACAATCATCCCAATAATCGTTATC 1223 consensus_11057#2 ------------------------------------------------------------ consensus_11057#1 ------------------------------------------------------------ consensus_11057#0 ATCCACCTCATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTAT 1283 consensus_11057#2 ------------------------------------------------------------ consensus_11057#1 ------------------------------------------------------------ consensus_11057#0 ATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTA 1343 consensus_11057#2 ------------------------------------------------------------ consensus_11057#1 ------------------------------------------------------------ consensus_11057#0 GTGGTTACAATACTAGGCAATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAA 1403 consensus_11057#2 ------------------------------------------------------------ consensus_11057#1 ------------------------------------------------------------ consensus_11057#0 ACAATGATAAAATTCCAGTGAGCGAAATGAACATTAGTGAGGACAGTCAAGTTGGTACTG 1463 consensus_11057#2 ------------------------------------------------------------ consensus_11057#1 ------------------------------------------------------------ consensus_11057#0 ATGAACCTATTCAAACAAACGATCCTACTGAAGATTCCCCATATTTCGAGCTCGACTTTG 1523 consensus_11057#2 ------------------------------------------------------------ consensus_11057#1 ------------------------------------------------------------ consensus_11057#0 CTAGCGGAATTTTCGACGTACAAATTCACGAGAGGGCTAGATTCTTTTTAACTTTACGTA 1583 consensus_11057#2 ------------------------------------------------------------ consensus_11057#1 ------------------------------------------------------------ consensus_11057#0 TCGATGACAGTGAGCTTTCTCAAAATGATTG 1614 consensus_11057#2 ------------------------------- consensus_11057#1 ------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||