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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11057#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1614 fasta sequence
[GCTTTTCGTTTCGAACCGGAAGTTCTTGGCGTGATTTCGACGTATGTTGGATTTCTGCTGCTTTCGTCTGAAAGTTTTTGTGTATTTTGCTGTTCATTACTTTCGACCAATTGACAAATTCATCTAGCTATCTAGTAACGTTTTCCAAAACCTTGTCATGCACAATGAACGCCGCAGTTTCAGATCAAATCTAGATTCTAATCTATCAGATACTATTCGAGTAGTAGCCTGCAAACAAAATCAAGACTTACAAATCACTTTCGCTAATGATTATGCGTGTTCAGACAGACCAAGACCTACCGGTAGCAAAATAGCATATTCTGCTTCAGGCTCAGGATTACGAGATACCAATGCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGAAAATGATGCCACTTTTGTCGCAACTCCCATGGATTCGCATACTCAAGTCAGTTACGGACATGTTAACAGGCGTCCATCCGGCAATAAATCAGAATTTGATTATCAAAATAATTGTTGTCCTACACACGGCATGCTTTCCATGATTAAGGATCAAGAGCCATATAATCGTGAC-TGATGACT-CAGTGAGAAATAAATCGGGCTTTGTTTCTGGCTAATCCACCTACATCCGTTTTAGCTAGTCGTATTCGTGGCCGCGGTTATAATAATAATATAGCCCATGATTGCCGGCGAATAGATATACAAAAGAATTCTTTAAACCAACCTATACTAAATGGATCACGTATGGATCGTTCAACAATTTTTCGATCGACATCAGATCAACAGCGTAGTGTTTTCCCATCCAAATCAATGAAAGAGCGTGGATTTTACAATTTAAATTCTGAACATGACCAGTCGGGAAGTCTTGTCCAAAAATTCTCGTGGCCTTACGCGACATTCGCGAGTTCACTTTCAGAATAATTTTCGTCGTGGACAAGGTTCAAGACAATACTGGGGTCATGATGATAGATTTGGAATTCATGAGAATACTCCAGGGATTCGTGTTCAAAATTCTTTTCACAATGGAGATTTTAAAAGTCGTCACCATTCTGGTGATGAATATATTGATGATTTAACCCCAGAGGATATTGCAAAATACAAACTAGAAATCAATATGGATAAACAACCACGCTCTCTAAATCATCATTATCAACATCAACACCGACCACATCATCATTACTACAATCATCCCAATAATCGTTATCATCCACCTCATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGGTTACAATACTAGGCAATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAAACAATGATAAAATTCCAGTGAGCGAAATGAACATTAGTGAGGACAGTCAAGTTGGTACTGATGAACCTATTCAAACAAACGATCCTACTGAAGATTCCCCATATTTCGAGCTCGACTTTGCTAGCGGAATTTTCGACGTACAAATTCACGAGAGGGCTAGATTCTTTTTAACTTTACGTATCGATGACAGTGAGCTTTCTCAAAATGATTG]
[+] EMBL CD116861 [GCTTTTCGTTTCGAACCGGAAGTTCTTGGCGTGATTTCGACGTATGTTGGATTTCTGCTGCTTTCGTCTGAAAGTTTTTGTGTATTTTGCTGTTCATTACTTTCGACCAATTGACAAATTCATCTAGCTATCTAGTAACGTTTTCCAAAACCTTGTCATGCACAATGAACGCCGCAGTTTCAGATCAAATCTAGATTCTAATCTATCAGATACTATTCGAGTAGTAGCCTGCAAACAAAATCAAGACTTACAAATCACTTTCGCTAATGATTATGCGTGTTCAGACAGACCAAGACCTACCGGTAGCAAAATAGCATATTCTGC TCAGGCTCAGGATTACGAGATACCAATGCTCACAAAATGCAGCGTCAGGCAGTCATTTCAG ]
[+] EMBL CD090100 [ CTTTTCGTTTCGAACCGGAAGTTCTTGGCGTGATTTCGACGTATGTTGGATTTCTGCCGCTTTCGTCTGAAAGTTTTTGTGTATTTTGCTGTTCATTACTTTCGACCAATTGACAAATTCATCTAGCTATCTAGTAACGTTTTCCAAAACCTTGTCATGCACAATGAACGCCGCAGTTTCAGATCAAATCTAGATTCTAATCTATCGGATACTATTCGAGTAGTAGCCTGCAAACAAAATCAAGACTTACAAATCACTTTCGCTAATGATTATGCGTGTTCAGACAGACCAAGACCTACCGGTAGCAAAATAGCATATTCTGCTTCAGGCTCAGGATTACGAGATACCAATGCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGGAAATGATGCCACTTTTGTCGCAACTCCCATGGATTCGCATACTCAAGTCAGTTACGGACATGTTAACAGGCGTCCATCCGG ]
[-] EMBL CD198023 [ TCAAATCTAGATTCTAATCTATCAGATACTATTCGAGTAGTAGCCTGCAAACAAAATCAAGACTTACAAATCACTTTCGCTAATGATTATGCGTGTTCAGACAGACCAAGACCTACCGGTAGCAAAATAGCATATTCTGCTTCAGGCTCAGGATTACGAGATACCAATGCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGAAAATGATGCCACTTTTGTCGCAACTCCCATGGATTCGCATACTCAAGTCAGTTACGGACATGTTAACAG ]
[-] EMBL CD059639 [ GCAAAATAGCATATTCTGCTTCAGGCTCAGGATTACGAGATTCCAATGCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGGCCTCAACATAATAGAAACTATGAAAATGATGCCACTTTTGTTGCAACTCCCATGGATTCGCATACTCAAGACAGTTACGGACATGTTAACAGGGGTCCATCCGGCAATAAATCAGAATTTGATTATCAAAATAATTGTTGTCCTACACACGGCATGCTTTCCATGATTAAGGATCAAGAGCCATATAATCGTGAC TGATGACTGCAGTGAGAAAT ]
[+] EMBL CD092611 [ agggACGAGATACCAATGCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGAAAATGATGCCACTTTTGTCGCAACTCCCATGGATTCGCATACTCAAGTCAGTTACGGACATGTTAACAGGCGTCCATCCGGCAATAAATCAGAATTTGATTATC ]
[+] EMBL CD092632 [ GCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGAAAATGATGCCACTTTTGTCGCAACTCCCATGGATTCGCATACTCAAGTCAGTTACGGACATGTTAACAGGCGTCCATCCGGCAATAAATCAGAATTTGATTATC ]
[+] EMBL CD092553 [ GCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGAAAATGATGCCACTTTTGTCGCAACTCCCATGGATTCGCATACTCAAGTCAGTTACGGACATGTTAACAGGCGTCCATCCGGCAATAAATCAGAATTTGATTATC ]
[+] EMBL CD092569 [ GCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGAAAATGATGCCACTTTTGTCGCAACTCCCATGGATTCGCATACTCAAGTCAGTTACGGACATGTTAACAGGCGTCCATCCGGCAATAAATCAGAATTTGATTATC ]
[+] EMBL CD059329 [ CCATCCGGCAATAAATCAGAATTTGATTATCAAAATAATCGTCGTCCTACACACGGCATGCATTCCATGATTAAGGATCAAGAGCAATATAATCGTGACTTGATGACT CAGTGTGAAATAAATCGGGCTTTGTTTCTGGCTAATCCACCTACATCCGTTTTAGCTAGTCGTATTCGTGGCCGCGGTTATAATAATAATATAGCCCATGATTGCCGGCGAATAGATATACAAAAGAATTCTTTAAACCAACCTATACTAAATGGATCACGTATGGATCGTTCAACAATTTTTCGATCGACATCAGATCAACAGCGTAGTGTTTTCCCATCCAAATCAATGAAAGAGCGTGGATTTTACAATTTAAATTCTGAACATGACCAGTCGGGAAGTCTTGTCCAAAAATTCTCGTGGCCTTACGCGACATTCGCGAGTTCACTTTCAGAATAATTTTCGTCGTGGACAAGGGTCAAGACAATACTGGGGTCATGATGATAGATTTGGAATTCATGAGAATACTCCAGGGATTCGTGTTCAAAATTCTTTTCACAATGGAGATTTTAAAAGTCGTCACCATTCTGGTGATGAATATATTGATGATTTAACCCCAGA GATATTGCGCAATACAAACTAGAAATCAATATGGATAAACAACCACGCTCTCTAAATCATCAT ]
[-] EMBL BG930985 [ TTCTTCGATCGACATCAGATCGACAGCGTAGTGTTTCCCCATCGTAATCAATGAAAGAGCGTGGATTTTACAATTTAGATTCTGAACATGA CAGTCGGGAAGTCTTGTCCACAAATTCTCGTGGCCTTACGCGACATTCGCGAGTTCACTTTCAGAATAATTTTCGTCGTGGACAAGGTTCAAGACTATACTGGGGTCATGATG ]
[+] EMBL AI068008 [ TTCAAGACAATACTGGGGTCATGATGATAGATTTGGAATTCATGAGAATACTCCAGGGATTCGTGTTCAAAATTCTTTTCACAATGGCGATTTTAAAAGTCGTCACCATTCTGGTGATGAATATATTGATGATTTAACCCCAGAGGATATTGCAAAATACAAACTAGAAATCAATATGGATAAACAACCACGCTCTCTAAATCATCATTATCAACATCAACACCGACCACATCATCATTACTACAATCATCCCAATAATCGTTATCATCCACCTCATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGGTTACAATACTAGGCAATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAAACAATGATAAAATTCCAGTGAGCGAAATGAACATTAGTGAGGACAGTCAAGTTGGTACTGATGAACCTATTCA ]
[+] EMBL AI067740 [ ACAATACTGGGGTCATGATGATAGATTTGGAATTCATGAGAATACTCCAGGGATTCGTGTTCAAAATTCTTTTCACAATGGAGATTTTAAAAGTCGTCACCATTCTGGTGATGAATATATTGATGATTTAACCCCAGAGGATATTGCAAAATACAAACTAGAAATCAATATGGATAAACAACCACGCTCTCTAAATCATCATTATCAACATCAACACCGACCACATCATCATTACTACAATCATCCCAATAATCGTTATCATCCACCTCATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGGTTACAATACTAGGCAATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAAACAATG ]
[+] EMBL AI068347 [ ACAATACTGGGGTCATGATGATAGATTTGGAATTCATGAGAATACTCCAGGGATTCGTGTTCAAAATTCTTTTCACAATGGAGATTTTAAAAGTCGTCACCATTCTGGTGATGAATATATTGATGATTTAACCCCAGAGGATATTGCAAAATACAAACTAGAAATCAATATGGATAAACAACCACGCTCTCTAAATCATCATTATCAACATCAACACCGACCACATCATCATTACTACAATCATCCCAATAATCGTTATCATCCACCTCATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGGTTACAATACTAGGCAATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAAACAAT ]
[+] EMBL AI067851 [ ACAATACTGGGGTCATGATGATAGATTTGGAATTCATGAGAATACTCCAGGGATTCGTGTTCAAAATTCTTTTCACAATGGAGATTTTAAAAGTCGTCACCATTCTGGTGATGAATATATTGATGATTTAACCCCAGAGGATATTGCAAAATACAAACTAGAAATCAATATGGATAAACAACCACGCTCTCTAAATCATCATTATCAACATCAACACCGACCACATCATCATTACTACAATCATCCCAATAATCGTTATCATCCACCTCATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGGTTACAATACTAGGCAATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAAACAA ]
[+] EMBL AI067370 [ ACAATACTGGGGTCATGATGATAGATTTGGAATTCATGAGAATACTCCAGGGATTCGTGTTCAAAATTCTTTTCACAATGGAGATTTTAAAAGTCGTCACCATTCTGGTGATGAATATATTGATGATTTAACCCCAGAGGATATTGCAAAATACAAACTAGAAATCAATATGGATAAACAACCACGCTCTCTAAATCATCATTATCAACATCAACACCGACCACATCATCATTACTACAATCATCCCAATAATCGTTATCATCCACCTCATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGGTTACAATACTAGGCAATATCANACTAACGAGGAAAACAAGACTAGGTGTTTCA ]
[+] EMBL AI067036 [ ACAATACTGGGGTCATGATGATAGATTTGGAATTCATGAGAATACTCCAGGGATTCGTGTTCAAAATTCTTTTCACAATGGAGATTTTAAAAGTCGTCACCATTCTGGTGATGAATATATTGATGATTTAACCCCAGAGGATATTGCAAAATACAAACTAGAAATCAATATGGATAAACAACCACGCTCTCTAAATCATCATTATCAACATCAACACCGACCACATCATCATTACTACAATCATCGCAATAATCGTTATCATCCGACTCATCAGTAACAAACTCAGGAGAAGTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTC ]
[+] EMBL AI067962 [ ACAATACTGGGGTCATGATGATAGATTTGGAATTCATGAGAATACTCCAGGGATTCGTGTTCAAAATTCTTTTCACAATGGAGATTTTAAAAGTCGTCACCATTCTGGTGATGAATATATTGATGATTTAACCCCAGAGGATATTGCAAAATACAAACTAGAAATCAATATGGATAAACAACCACGCTCTCTAAATCATCATTATCAACATCAACACCGACCAGATCATCATTACTAGAATCATCCCAATAATCGTTATCATCCACCTCATCATAAACAACCTCAAAAGAATTATTCGAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGGTTACAATACTAGGCAATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAAACAATGATAAAATTCCAGTGAGCGAAATGAACATTAGTGAGGACAGTCAAGTTGGTACTGATGAACCTATTCAAACAAACGATCCTACTGAAGATTCCCCATATTTCGAGCTCGACTTTGCTAGCGGAATTTTCGACGTACAAATTCACGAGAGGGCTAGATTCTTTTTAACTTTACGTATCGATGACAGTGAGCTTTCTCAAAATGATTG]
[+] EMBL CD161981 [ attttgtccAATCATCATTATCAACATCAACACCGACCACATCATCATTACTACAGTCATCCCAATAATCGTTATCATCCACCTCATCATAAACAACCTCAAAGGAATTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGG ]
[+] EMBL CD060928 [ CAACATCAACACCGACCACATCATCATTACTACAATCATCCCAATAATCGTTATCATCCGCCTCATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGGTTACAATACTAGGCAATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAAACAATGATAAAATTCCAGTGAGCGAAATGAACATTAGTGAGGACAGTCAAGTTGGTACTGATGAACCTATTCAAACAAACGATCCTACTGAA ]
consensusID : consensus_11057#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 975 fasta sequence
[GAGGGCCAAAATTCGGCACGAGGCGTTATCATCCACCTCATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGGTTACAATACTAGGCAATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAAACAATGATAAAATTCCAGTGAGCGAAATGAACATTAGTGAGGACAGTCAAGTTGGTACTGATGAACCTATTCAAACAAACGATCCTACTGAAGATTCCCCATATTTCGAGCTCGACTTTGCTAGCGGAATTTTCGACGTACAAATTCACGAGAGGGCTAGATC-TTTTTTAACTTTAGGTATCGATGACAGTGAGCTTTCTCAAAATGATTGTTACACAAATATATCTGAATTAAGTACGCACGGAATGCATCGAAGTCATTCTCTTCCATCGTTAAGAGACTTGGAAAGAAATTACCAACTACATTCATTTGAGGACTGTACTACACCCACAACCAGCCTTAATACTGGAGGAATTGAAGATTTATCAACAAAAATTAAAGCAGCGACTATCTCAGTAGAAACGACATATATAAAATCTGAAAAT-AACGTAAATGTATCGAGTGC-AAGTGTTTGTGGTAGTGATGTAGCACAAGAATGCAATAATATGGAGGACGAAAATCGACGATAACGCAATGATCTCGCAAAAATGTAATGTTTGAGTAGTCTATGGATTGGATCACTAACAGTCAAATGTATAGCTTAATTGTTTCACTTTACCTCTTCTTAGATTTTTTACTTGTATGACTTCGAAAATGTTTTTACTTATTTATTGTTATGACATCGCCTTAACTGTAATGAGATACTTCACTTGCTCCTTTGTGATTACGGATTAACTTGATTAATGATATAGTTTTCTATGATAAATTTATTGATAAATGAAAGGC]
[+] EMBL CD082927 [GAGGGCCAAAATTCGGCACGAGGCGTTATCATCCACCTCATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGGTTACAATACTAGGCAATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAAACAATGATAAAATTCCAGTGAGCGAAATGAACATTAGTGAGGACAGTCAAGTTGGTACTGATGAACCTATTCAAACAAACGATCCTACTGAAGATTCCCCATATTTCGAGCTCGACTTTGCTAGCGGAATTTTCGACGTACAAATTCACGAGAGGGCTAGATC TTTTTTAACTTTAGGTATCGATGACAGTGAGCTTTCTCAAAATGATTGTTACACAAATATATCTGAATTAAGTACGCACGGAATGCATCGAAGTCATTCTCTTCCATCGTTAAGAGACTTGGAAAGAAATTACCAACTACATTCATTTGAGGACTGTACTACACCCACAACCAGCCTTAATACTGGAGGAATTGAAGATTTATCAACAAAAATTAAAGCAGCGACTATCTCAGTAGAAACGACATATATAAAATCTGAAAAT AACGTAAATGTATCGAGTGCAAAGTG TTGTGGTAGT ]
[+] EMBL CD083083 [ ATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTATATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGGTTACAATACTAGGCAATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAAACAATGATAAAATTCCAGTGAGCGAAATGAACATTAGTGAGGACAGTCAAGTTGGTACTGATGAACCTATTCAAACAAACGATCCTACTGAAGATTCCCCATATTTCGAGCTCGACTTTGCTAGCGGAATTTTCGACGTACAAATTCACGAGAGGGCTAGATC TTTTTTAACTTTAGGTATCGATGACAGTGAGCTTTCTCAAAATGATTGTTACACAAATATATCTGAATTAAGTACGCACGGAATGCATCGAAGTCATTCTCTTCCATCGTTAAGAGACTTGGAAAGAAATTACCAACTACATTCATTTGAGGACTGTACTACACCCACAACCAGCCTTAATACTGGAGGAATTGAAGATTTATCAACAAAAATTAAAGCAGCGACTATCTCAGTAGAAACGACATATATAAAATCTGAAAATAAACGT AATGTATCGAGTGC AAGTGTTTGTGGTAG ]
[+] EMBL CD191133 [ TGTTCCACAAACAATGATAAAATTCCAGTGAGCGAAATGAACATTAGTGAGGACAGGCAAGTTGGTACTGATGAACCTATTCAAACAAACGATCCTACTGAAGATTCCCCATATTTCGAGCTCGACTTTGCTAGCGGAACTTTCGACGTACAAATTCACGAGAGGGCTAGATCTTTTTTTAACTTTAGGTATCGATGACAGTGAGCTTTCTCAAAATGATTGTTACACAAATATATCTGAATTAAGTACGCACGGAATGCATCGAAGTCATTCTCTTCCATCGTTAAGAGACTTGGAAAGAAATTACCAACTACATTCATTTGAGGACTGTACTACACCCACAACCAGCCTTAATACTGGAGGAAT ]
[+] EMBL CD197074 [ TTTTTTAACTTTAGGTATCGATGACAGTGAGCTTTCTCAAAATGATTGTTACACAAATATATCTGAATTAAGTACGCACGGAATGCATCGAAGTCATTCTCTTCCATCGTTAAGAGACTTGGAAAGAAATTACCAACTACATTCATTTGAGGACTGTACTACACCCACAACCAGCCTTAATACTGGAGGAATTGAAGATTTATCAACAAAAATTAAAGCAGCGACTATCTCAGTAGAAACGACATATATAAAATCTGAAAAT AACGTAAATGTATCGAGTGC AAGTGTTTGTGGTAGTGATGTAGCACAAGAATGCAATAATATGGAGGACGAAAATCGACGATAACGCAATGATCTCGCAAAAATGTAATGTTTGAGTAGTCTATGGATTGGATCACTAACAGTCAAATGTATAGCTTAATTGTTTCACTTTACCTCTTCTTAGATTTTTTACTTGTATGACTTCGAAAA ]
[-] EMBL CD076657 [ ATATATCTGAATTAAGTACGCACGGAATGCATCGAAGTCATTCTCTTCCATCGTTAAGAGACTTGGAAAGAAATTACCAACTACATTCATTTGAGGACTGTANTACACCCACAACCAGCCTTAATACTGGAGGAATTGAAGATTTATCAACAAAAATTAAAGCAGCGACTATCTCAGTAGAAACGACATATATAAAATCTGAAAAT AACGTAAATGTATCGAGTGC AAGTGTTTGTGGTAGTGATGTAGCACAAGAATGCAATAATATGGAGGACGAAAATCGACGATAACGCAATGATCTCGCAAAAATGTAATGTTTGAGTAGTCTATGGATTGGATCACTAACAGTCAAATGTATAGCTTAATTGTTTCACTTTACCTCTTCTTAGATTTTTTACTTGTATGACTTCGAAAATGTTTTTACTTATTTATTGTTATGACATCGCCTTAACTGTAATGAGATACTTCACTTGCTCCTTTGTGATTACGGATTAACTTGATTAATGATATAGTTTTCTATGATAAATTTATTGATAAATGAAAGGC]
[+] EMBL CD082990 [ AATGCATCGAAGTCATTCTCTTCCATCGTTAAGAGACTTGGAAAGAAATTACCAACTACATTCATTTGAGGACTGTACTACACCCACAACCAGCCTTAATACTGGAGGAATTGAAGATTTATCAACAAAAATTAAAGCAGCGACTATCTCAGTAGAAACGACATATATAAAATCTGAAAAT AACGTAAATGTATCGAGTGC AAGTGTTTGTGGTAGTGATGTAGCACAAGAATGCAATAATATGGAGGACGAAAATCGACGATAACGCAATGATCTCGCAAAAATGTAATGTTTGAGTAGTCTATGGATTGGATCACTAACAGTCAAATGTATAGCTTAATTGTTTCACTTTACCTCTTCTTAGATTTTTTACTTGTATGACTTCGAAAATGTTTTTACTTATTTATTGTTATGACATCGCCTTAACTGTAATGAGATACTTCACTTGCTCCTTTGTGATTACGGATTAACTTGATTAATGATATAGTTTTCTATGATAAATTTATTGATAAATGAAAGG ]
[-] EMBL CD076573 [ ATGCATCGAAGTCATTCTCTTCCATCGTTAAGAGACTTGGAAAGAAATTACCAACTACATTCATTTGAGGACTGTACTACACCCACAACCAGCCTTAATACTGGAGGAATTGAAGATTTATCAACAAAAATTAAAGCAGCGACTATCTCAGTAGAAACGACATATATAAAATCTGAAAAT AACGTAAATGTATCGAGTGC AAGTGTTTGTGGTAGTGATGTAGCACAAGAATGCAATAATATGGAGGACGAAAATCGACGATAACGCAATGATCTCGCAAAAATGTAATGTTTGAGTAGTCTATGGATTGGATCACTAACAGTCAAATGTATAGCTTAATTGTTTCACTTTACCTCTTCTTAGATTTTTTACTTGTATGACTTCGAAAATGTTTTTACTTATTTATTGTTATGACATCGCCTTAACTGTAATGAGATACTTCACTTGCTCCTTTGTGATTACGGATTAACTTGATTAATGATATAGTTTTCTATGATAAATTTATTGATAAATGAAAGGC]
[+] EMBL CD192728 [ CCAACCTTAATACTGGAGGAATTGAAGATTTATCAACAAAAATTAAAGCAGCGACTATCTCAGTAGAAACGACATATATAAAATCTGAAAAT AACGTACATGTATCGAGTGC AAGTGTTTGTGGTAGTGATGTAGCACAAGAGTGCAATAATATGGAGGACGAAAATCGACG ]
[-] EMBL CD076511 [ GCCTTAATACTGGAGGAATTGAAGATTTATCACCAAAAATTAAAGCAGCGACTATTTCAGTAGAAACGACATATATAAAATTTGAAAAT AACGTAAATGTATCGAGTGC AAGTGTTTGTGGTAGTGATGTAGCCCAAAAATGCAATAATATGGAGGGCGAAAATCGACGATAACGCAATGATTTCGCAAAAATGTAATGTTTGAGTAGTTTATGGATTGGATCCCTAACAGTCAAATGTATAGCTTAATTGTTTCCCTTTACCTCTTTTTAGATTTTTTACTTGTATGACTTCGAAAATGTTTTTACTTATTTATTGTTATGACATCCCCTTAACTGTAATGAGATACTTCCCTTGCTCCTTTGTGATTACGGATTAACTTGATTAATGAAATAGTTTTTTATGATAAATTTATTGATAAATGAAAGGC]
consensusID : consensus_11057#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 569 fasta sequence
[CACACGAGACCTACCGGTAGCAAAATAGCATATTCTGCTTCAGGCTCAGGATTACGAGATACCAATGCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGAAAATGATGCCACTTTTGTCGCAACTCCCATGGATTCGCATACTCAAGTCAGTTACGGACATGTTAACAGGCGTCCATCCGGCAATAAATCAGATTTCTGCTGCTTTCGTCTGAAAGTTTTTGTGTATTTTGCTGTTCATTACTTTCGACCAATTGACAAATTCATCTAGCTATCTAGTAACGTTTTCCAAAACCTTGTCATGCACAATGAACGCCGCAGTTTCAGATCAAATCTAGATTCTAATCTATCAGATACTATTCGAGTAGTAGCCTGCAAACAAAATCAAGACTTACAAATCACTTTCGCTAATGATTATGCGTGTTCAGACAGACCAAGACCTACCGGTAGCAAAATAGCATATTCTGCTTCAGGCTCAGGATTACGAGATACCAATGCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAA]
[+] EMBL CD093673 [CACACGAGACCTACCGGTAGCAAAATAGCATATTCTGCTTCAGGCTCAGGATTACGAGATACCAATGCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGAAAATGATGCCACTTTTGTCGCAACTCCCATGGATTCGCATACTCAAGTCAGTTACGGACATGTTAACAGGCGTCCATCCGGCAATAAATCAGATTTCTGCTGCTTTCGTCTGAAAGTTTTTGTGTATTTTGCTGTTCATTACTTTCGACCAATTGACAAATTCATCTAGCTATCTAGTAACGTTTTCCAAAACCTTGTCATGCACAATGAACGCCGCAGTTTCAGATCAAATCTAGATTCTAATCTATCAGATACTATTCGAGTAGTAGCCTGCAAACAAAATCAAGACTTACAAATCACTTTCGCTAATGATTATGCGTGTTCAGACAGACCAAGACCTACCGGTAGCAAAATAGCATATTCTGCTTCAGGCTCAGGATTACGAGATACCAATGCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAA]
[+] EMBL CD093697 [ GCAAAATAGCATATTCTGCTTCAGGCTCAGGATTACGAGATACCAATGCTCACAAAATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGAAAATGATGCCACTTTTGTCGCAACTCCCATGGATTCGCATACTCAAGTCAGTTACGGACATGTTAACAGGCGTCCATCCGGCAATAAATCAGATTTCTGCTGCTTTCGTCTGAAAGTTTTTGTGTATTTTGCTGTTCATTACTTTCGACCAATTGACAAATTCATCTAGCTATCTAGTAACGTTTTCCAAAACCTTGTCATGCACAATGAACGCCGCAGTTTCAGATCAAATCTAGATTCTAATCTATCAGATACTATTCGAGTAGTAGCCTGCAAACAAAATCAAGACTTACAAATCACTTTCGCTAATGATTATGCGTGTTCAGACAGACCAAGACCTACCGGTAGCANAATAGCATATTCTGCTTCAGGCTCAGGTTTACGAGATACCAATGCTCACANAATGCAGCGTCAGGCAGTCATTTCAGCCCACAn]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11057#0 GCTTTTCGTTTCGAACCGGAAGTTCTTGGCGTGATTTCGACGTATGTTGGATTTCTGCTG 60
consensus_11057#2 ------------------------------------------------------------
consensus_11057#1 ------------------------------------------------------------
consensus_11057#0 CTTTCGTCTGAAAGTTTTTGTGTATTTTGCTGTTCATTACTTTCGACCAATTGACAAATT 120
consensus_11057#2 ------------------------------------------------------------
consensus_11057#1 ------------------------------------------------------------
consensus_11057#0 CATCTAGCTATCTAGTAACGTTTTCCAAAACCTTGTCATGCACAATGAACGCCGCAGTTT 180
consensus_11057#2 ------------------------------------------------------------
consensus_11057#1 ------------------------------------------------------------
consensus_11057#0 CAGATCAAATCTAGATTCTAATCTATCAGATACTATTCGAGTAGTAGCCTGCAAACAAAA 240
consensus_11057#2 ------------------------------------------------------------
consensus_11057#1 --------------------------GAGGGCCAAAATTCGGCACGAGGCGTTATCATCC 34
consensus_11057#0 TCAAGACTTACAAATCACTTTCGCTAATGATTATGCGTGTTCAGACAGACCAAGACCTAC 300
consensus_11057#2 ---------------------------------------------CACAC-GAGACCTAC 14
consensus_11057#1 ACCTCATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTATATAA 94
** ** * **
consensus_11057#0 CGGTAGCAAAATAGCATATTCTGCTTCAGGCTCAGGATTACGAGATACCAATGCTCACAA 360
consensus_11057#2 CGGTAGCAAAATAGCATATTCTGCTTCAGGCTCAGGATTACGAGATACCAATGCTCACAA 74
consensus_11057#1 TTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTAGTGG 154
* * ** * * ** * ******* * * *
consensus_11057#0 AATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGA 420
consensus_11057#2 AATGCAGCGTCAGGCAGTCATTTCAGCCCACAAAGGACCTCAACATAATAGAAACTATGA 134
consensus_11057#1 T-TACAATACTAGGCA---ATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAA 210
* ** ***** ** *** * * **** *** * * * * *
consensus_11057#0 A-AATGATGCCACTTTTGT---CGCAACTCCCATGGATTCGCATACTCAAGTCAGTT--- 473
consensus_11057#2 A-AATGATGCCACTTTTGT---CGCAACTCCCATGGATTCGCATACTCAAGTCAGTT--- 187
consensus_11057#1 ACAATGATAAAATTCCAGTGAGCGAAATGAACATTAGTGAGGACAGTCAAGTTGGTACTG 270
* ****** * * ** ** ** *** * * * * ****** **
consensus_11057#0 ACGGACATGTT--AACAGGCG-TCCATCCGGCAATAAATCAGAATTTGA--TTATCAAAA 528
consensus_11057#2 ACGGACATGTT--AACAGGCG-TCCATCCGGCAATAAATCAGATTTCTG--CTGCTTTCG 242
consensus_11057#1 ATGAACCTATTCAAACAAACGATCCTACTGAAGATTCCCCATATTTCGAGCTCGACTTTG 330
* * ** * ** **** ** *** * * ** ** * **
consensus_11057#0 TAATTGTTGTCCTACACACGG---CATGCT---TTCCATGATTAAGGATCAAGAGCCATA 582
consensus_11057#2 T--CTGAAAGTTTTTGTGTAT---TTTGCT---GTTCATTACTTTCGACCAATTGACAAA 294
consensus_11057#1 CTAGCGGAATTTTCGACGTACAAATTCACGAGAGGGCTAGATCTTTTTTAACTTTAGGTA 390
* * * * * * *
consensus_11057#0 TA-ATCGTGACTGATGACTCAGTGAGAAATAAATCGGGCTTTGTTTCTGGCTAATCCACC 641
consensus_11057#2 T---TCAT--CTAGCTATCTAGTAACGTTTT--CCAAAACCTTGTCATGCACAATGAAC- 346
consensus_11057#1 TCGATGACAGTGAGCTTTCTCAAAATGATTGTTACACAAATATATC-TGAATTAAGTACG 449
* * * * * * ** * **
consensus_11057#0 TACATCC---GTTTTAGCTAGTCGTATTCGTGGCCGC---GGTTATAATAATAATATAGC 695
consensus_11057#2 -GCCGCA---GTTTCAG---ATCAAATCTAGATTCTA---ATCTATCA-GATACTATT-C 394
consensus_11057#1 CACGGAATGCATCGAAGTCATTCTCTTCCATCGTTAAGAGACTTGGAAAGAAATTACCAA 509
* * ** ** * * * * * **
consensus_11057#0 CCATGATTGCCGGCGAATAGATATACAAAAGAATTCTTTAAACCAACCTA--TACTAAAT 753
consensus_11057#2 GAGTAGTAGCCTGCAAACA-------AAATCAAGACTTACAAATCACTTT--CGCTAAT- 444
consensus_11057#1 CTACATTCATTTGAGGACT--------GTACTACACCCACAACCAGCCTTAATACTGGAG 561
* * * * * ** * * **
consensus_11057#0 GGATCACGTATGGATCGTTCAACAATTTTTCGATCGACATCAGATCAACA-GCGTAGTGT 812
consensus_11057#2 -GATTATGCGTG-----TTCAGACAGACCAAGACC--TACCGG--TAGCA-AAATAGCAT 493
consensus_11057#1 GAATTGAAGATT---TATCAACAAAAATTAAAGCAGCGACTATCTCAGTAGAAACGACAT 618
** * * * * * * * *
consensus_11057#0 TTTCCCATCC--AAATCAATGAAAGAGCGTGGA-TTTTACAATTTAAAT-TCTGA-ACAT 867
consensus_11057#2 ATTCTGCTTC--AGGCTCAGGATTACG---AGA-TACCAATGCTCACAA-AATG---CAG 543
consensus_11057#1 ATATAAAATCTGAAAATAACGTAAATGTATCGAGTGCAAGTGTTTGTGGTAGTGATGTAG 678
* * * * * * ** * * * ** *
consensus_11057#0 GACCAG---TCGGGAAG-TCTTGTCCAAAAATTCTCGTGGCCTTACGCGACATTCGCGAG 923
consensus_11057#2 CGTCAG---GCAGTCAT-TTCAGCCCACAA------------------------------ 569
consensus_11057#1 CACAAGAATGCAATAATATGGAGGACGAAAATCGACGATAACGCAATGATCTCGCAAAAA 738
** * * * * * **
consensus_11057#0 TTCACTTTCAGAATAATTTTCGTCGTGGACAAGGTTCAAGACAATACTGGGGTCATGATG 983
consensus_11057#2 ------------------------------------------------------------
consensus_11057#1 TGTAATGTTTGAGTAGTCTATGGATTGGATCACTAACAGTCAAATGTATAGCTTAATTGT 798
consensus_11057#0 ATAGATTTGGAATTCATGAGAATACTCCAGGGATTCGTGTTCAAAATTCTTTTCACAATG 1043
consensus_11057#2 ------------------------------------------------------------
consensus_11057#1 TTCACTTTACCTCTTCTTAGATTTTTTACTTGTATGACTTCGAAAATGTTTTTACTTATT 858
consensus_11057#0 GAGATTTTAAAAGTCGTCACCATTCTGGTGATGAATATATTGATGATTTAACCCCAGAGG 1103
consensus_11057#2 ------------------------------------------------------------
consensus_11057#1 TATTGTTATGACATCGCCTTAACTGTAATGAGATACTTCACTTGCTCCTTTGTGATTACG 918
consensus_11057#0 ATATTGCAAAATACAAACTAGAAATCAATATGGATAAACAACCACGCTCTCTAAATCATC 1163
consensus_11057#2 ------------------------------------------------------------
consensus_11057#1 GATTAACTTGATTAATGATATAGTTTTCTATGATAAATTTATTGATAAATGAAAGGC--- 975
consensus_11057#0 ATTATCAACATCAACACCGACCACATCATCATTACTACAATCATCCCAATAATCGTTATC 1223
consensus_11057#2 ------------------------------------------------------------
consensus_11057#1 ------------------------------------------------------------
consensus_11057#0 ATCCACCTCATCATAAACAACCTCAAAAGAATTATTCTAATGCTCATTACACACAATTAT 1283
consensus_11057#2 ------------------------------------------------------------
consensus_11057#1 ------------------------------------------------------------
consensus_11057#0 ATAATTCATCTAGGAAAGAGCCAGTTCGTCCAAATAATAAAATACGAGACTCATACAGTA 1343
consensus_11057#2 ------------------------------------------------------------
consensus_11057#1 ------------------------------------------------------------
consensus_11057#0 GTGGTTACAATACTAGGCAATATCAAACTAACGAGGAAAACAAGACTAGGTGTTCCACAA 1403
consensus_11057#2 ------------------------------------------------------------
consensus_11057#1 ------------------------------------------------------------
consensus_11057#0 ACAATGATAAAATTCCAGTGAGCGAAATGAACATTAGTGAGGACAGTCAAGTTGGTACTG 1463
consensus_11057#2 ------------------------------------------------------------
consensus_11057#1 ------------------------------------------------------------
consensus_11057#0 ATGAACCTATTCAAACAAACGATCCTACTGAAGATTCCCCATATTTCGAGCTCGACTTTG 1523
consensus_11057#2 ------------------------------------------------------------
consensus_11057#1 ------------------------------------------------------------
consensus_11057#0 CTAGCGGAATTTTCGACGTACAAATTCACGAGAGGGCTAGATTCTTTTTAACTTTACGTA 1583
consensus_11057#2 ------------------------------------------------------------
consensus_11057#1 ------------------------------------------------------------
consensus_11057#0 TCGATGACAGTGAGCTTTCTCAAAATGATTG 1614
consensus_11057#2 -------------------------------
consensus_11057#1 -------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||