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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11077#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 26 consensus length = 1271 fasta sequence [CTCCNAGGCCANAATTTGGCACTCGTTGATTTCAAAAAATAGTTGG-ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT--AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG-CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT-GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG-GCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCA-GAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG-AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGGCTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGAC---CCTCATGTAAATTCGGGCTGCTTCAAAGTCTAAATTCTTTGCTTATTATTGGATAGAAACGTAATAATTATGAAATATAAAACTAATCAGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGGCAGCTGCATTACCGTACTGCGT] [+] EMBL CD079785 [CTCCNAGGCCANAATTTGGCACGAGGTGATTTCAAAAAATAGTTGG ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCANGAGGAACTTGCACTTGC ] [+] EMBL CD080789 [ TTTGCACGAGGTGACTT AAAAAATAGTTGG ATACCAGGCTTTGCCATCCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGATGGGAT ATCATCAGGAGGAACTTGCACTTGCT ] [+] EMBL CD178505 [ aggTCGTTGATTTCAAAA TTGG ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTA ] [+] EMBL CD185751 [ gTCGTTGATTTCAAAAAATAGTTGG ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCT CAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGG ] [+] EMBL CD098390 [ TCGTTGATTTCAAAAAATAGTTGGCATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGA ] [+] EMBL CD178913 [ TCGTTGATTTCAAAAAATAGTTGG ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACCCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGT ] [-] EMBL CD189844 [ CGTTGATTTCAAAAAATAGTTGG ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGCAGGACAgattct ] [-] EMBL CD189863 [ CGTTGATTTCAAAAAATAGTTGG ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGCAGGACAgattct ] [+] EMBL CD179029 [ AAAAAATAGTTGG ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTCGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTATAACTCCTTTCTTACGCATTAAATCCTTCC ] [+] EMBL CD079306 [ TTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGn ] [-] EMBL CD190858 [ CGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGATAAAAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCA ATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCT ] [+] EMBL CD112047 [ ACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAagg ] [-] EMBL CD130493 [ GGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGC ] [+] EMBL CD069774 [ ATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTACACCA GAGCA ] [+] EMBL CD083862 [ gGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACT ] [-] EMBL CD066487 [ ATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAG ] [-] EMBL CD130462 [ AGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCCTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGC ] [-] EMBL CD066697 [ GTTTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAG ] [-] EMBL CD074043 [ CAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCA GAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGACTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGAC CCTCATGTAAATTCGGGCTGCTTCAAAGTCTAAATTCTTTGCTTATTATTGGATAGAAACGTAATAATTATGAAATATAAAAC ] [-] EMBL CD073586 [ ATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTGNCAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCA GAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGACTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGAC CCTCATGTAAATTCGGGCTGCTTCAAAGTTTAAATTCTTTGCTTATTATTGGATAGAAACGTAATAATTATGAAATATAAAAC ] [+] EMBL BG931454 [ aTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCA GAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGACTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGAC CCCCAatccatca ] [-] EMBL BF936555 [ TAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCA GAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGGCTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGGACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGACCCTCCTCATGTAAATTCGGGCTGCTTCAAAGTTTAAATTCTTTGCTTATTATTGGATAGAAACGTAATAATTATGAAATATAAAACTAATCAGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGGCAGCTGCATTACCGTACTGCGT] [-] EMBL CD141679 [ TTTGTACTCCTGCATCACTTAACCATTGNCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCA GAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGGCTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCTTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAG ] [-] EMBL AI395137 [ ctGTAATGAGCCCA TTAT CTTCTCAGTTTGTATGCAATAAG ATATGCCGTTGCGTTG AATTAAGAGGTTACTGGGTCTTGAAGTTCCACCAGGAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAGAAAAAGCTGTTGCCATACATTGAAGAACGCTTATTGGCTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATGTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGACCCTCCTCATGTAAATTCGGGCTGCTTCAAAGTCTAAATTCTTTGCTTATTATTGGATAGAAACGTAATAATTATGAAATATAAAACTAATCAGTGAAAAAAAAAAAAAAAA ] [-] EMBL AI395098 [ CCA GAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGGCTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGACCCTCCTCATGTAAATTCGGGCTGCTTCAAAGTCTAAATTCTTTGCTTATTATTGGATAGAAACGTAATAATTCTGAAATATAAAACTAATCAGTGAAAAAAAAAAAAAAAA ] [-] EMBL CD195613 [ CTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGGCTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATAGCGGGTCACTAGAT ] consensusID : consensus_11077#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 653 fasta sequence [TCGTTATTTCAAAAAATAGTTGGATACCAGGCTTTGCCANCCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGATGTATGTCCTGTTAAATCACAGCATGTTTTAGAAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTGCAGG] [-] EMBL CD188638 [TCGTTATTTCAAAAAATAGTTGGATACCAGGCTTTGCCANCCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGATGTATGTCCTGTTAAATCACAGCATGTTTTAGAAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTAGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTGCAGG] [+] EMBL CD177868 [ acgacctgTGTTTTAGAAAAAACTCACTCCACGAGAGTGTTTAAAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCc ] [+] EMBL CD077472 [ CTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCA ] consensusID : consensus_11077#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 307 fasta sequence [TGTTTCCTGGTGTTTAGAATATGCCGTTGGCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCAGAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAGAAAAGCTGTTGCCATACATTGAAGAACGCTTATTGACTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGACCCTCATGTAAATTCGGG] [+] EMBL CD139879 [TGTTTCCTGGTGTTTAGAATATGCCGTTGGCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCAGAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAGAAAAGCTGTTGCCATACATTGAAGAACGCTTATTGACTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGACCCTCATGTAAATTCGGG] consensusID : consensus_11077#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 234 fasta sequence [TCGTTGATTTCAAAAGTAAGGGTCTGTAGTGAGAATAGTTGGATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGATAAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGC] [+] EMBL CD097845 [TCGTTGATTTCAAAAGTAAGGGTCTGTAGTGAGAATAGTTGGATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGATAAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11077#1 ----------------------TCGTT-ATTTCAAAAAATAGTTGGATACCAGGCTTTGC 37
consensus_11077#3 -TCGTTGATTTCAAA--AGTAAGGGTC-TGTAGTGAGAATAGTTGGATACCAGGCTTTGC 56
consensus_11077#0 CTCCNAGGCCANAATTTGGCACTCGTTGATTTCAAAAAATAGTTGGATACCAGGCTTTGC 60
consensus_11077#2 ------------------------------------TGTTTCCTGGTGTTTAGAATATGC 24
* *** ** * ***
consensus_11077#1 CANCCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGA-GAACAGAAGGCGGATTTACT 96
consensus_11077#3 CAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACT 116
consensus_11077#0 CAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACT 120
consensus_11077#2 C-GTTGGCTGAAATTAA-GAGGTTACTGGGTCCTGAAGTTCCACCAGAGCAAGCTGGCTT 82
* *** * * * ** * ** *** * ** ** * * *
consensus_11077#1 ATTCTGTTTACTACGTAGTTCTTGTTGTCAAGATGTATGTCCTGTTAAATCACAGCATGT 156
consensus_11077#3 ATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT-------------------------- 150
consensus_11077#0 ATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT-------------------------- 154
consensus_11077#2 TGTTGGTTTTACTCGTGGTTCTC-CAGAAAAGCTGT----------------TGCCATAC 125
* **** *** ***** * *** *
consensus_11077#1 TTTAGAAAAAACTCA----CTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAG 212
consensus_11077#3 -----AAAAAACTCA----CTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAG 201
consensus_11077#0 -----AAAAAACTCA----CTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAG 205
consensus_11077#2 ATTGAAGAACGCTTATTGACTTTTTCTTGATATTTCGT-CGTTTAGACTTTCCCTATTTT 184
* ** ** * ** * *** * ** ******* *
consensus_11077#1 TGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATT 272
consensus_11077#3 TGCGCATCACTCAGGCACGCTTTTTACCGTTGC--------------------------- 234
consensus_11077#0 TGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATT 265
consensus_11077#2 TCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATA 244
* ** * ** * ** ** * ***
consensus_11077#1 AGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGC 332
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 AGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGC 325
consensus_11077#2 GATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGACCCTCATGTAAATTC 304
consensus_11077#1 GTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGG 392
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 GTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGG 385
consensus_11077#2 GGG--------------------------------------------------------- 307
consensus_11077#1 CACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCT 452
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 CACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCT 445
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 TTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCG 512
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 TTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCG 505
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 TGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACG 572
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 TGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACG 565
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 CATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGT 632
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 CATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGT 625
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 TATTAGTCATGGCGGTGCAGG--------------------------------------- 653
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 TATTAGTCATGGCGGTGCAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCG 685
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 ------------------------------------------------------------
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 ACTAATCGTCGTTGTAAATGACACGTTGATGGATAATCATCAGGAGGAACTTGCACTTGC 745
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 ------------------------------------------------------------
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 TTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATG 805
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 ------------------------------------------------------------
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 GACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTGGC 865
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 ------------------------------------------------------------
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 TGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCAGAGCAAGCTGGCTTTGTTGGTTT 925
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 ------------------------------------------------------------
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 TACTCGTGGTTCTCCAGAAAAGCTGTTGCCATACATTGAAGAACGCTTATTGGCTTTTTC 985
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 ------------------------------------------------------------
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 TTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATA 1045
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 ------------------------------------------------------------
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 TTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCAT 1105
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 ------------------------------------------------------------
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 TAGATTTCAGTTTCGAGACCCTCATGTAAATTCGGGCTGCTTCAAAGTCTAAATTCTTTG 1165
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 ------------------------------------------------------------
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 CTTATTATTGGATAGAAACGTAATAATTATGAAATATAAAACTAATCAGTGAAAAAAAAA 1225
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 ----------------------------------------------
consensus_11077#3 ----------------------------------------------
consensus_11077#0 AAAAAAAAAAAAAAAAAAACATGGCAGCTGCATTACCGTACTGCGT 1271
consensus_11077#2 ----------------------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||