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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11077#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 26 consensus length = 1271 fasta sequence
[CTCCNAGGCCANAATTTGGCACTCGTTGATTTCAAAAAATAGTTGG-ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT--AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG-CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT-GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG-GCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCA-GAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG-AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGGCTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGAC---CCTCATGTAAATTCGGGCTGCTTCAAAGTCTAAATTCTTTGCTTATTATTGGATAGAAACGTAATAATTATGAAATATAAAACTAATCAGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGGCAGCTGCATTACCGTACTGCGT]
[+] EMBL CD079785 [CTCCNAGGCCANAATTTGGCACGAGGTGATTTCAAAAAATAGTTGG ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCANGAGGAACTTGCACTTGC ]
[+] EMBL CD080789 [ TTTGCACGAGGTGACTT AAAAAATAGTTGG ATACCAGGCTTTGCCATCCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGATGGGAT ATCATCAGGAGGAACTTGCACTTGCT ]
[+] EMBL CD178505 [ aggTCGTTGATTTCAAAA TTGG ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTA ]
[+] EMBL CD185751 [ gTCGTTGATTTCAAAAAATAGTTGG ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCT CAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGG ]
[+] EMBL CD098390 [ TCGTTGATTTCAAAAAATAGTTGGCATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGA ]
[+] EMBL CD178913 [ TCGTTGATTTCAAAAAATAGTTGG ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACCCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGT ]
[-] EMBL CD189844 [ CGTTGATTTCAAAAAATAGTTGG ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGCAGGACAgattct ]
[-] EMBL CD189863 [ CGTTGATTTCAAAAAATAGTTGG ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGCAGGACAgattct ]
[+] EMBL CD179029 [ AAAAAATAGTTGG ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTCGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTATAACTCCTTTCTTACGCATTAAATCCTTCC ]
[+] EMBL CD079306 [ TTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGn ]
[-] EMBL CD190858 [ CGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGATAAAAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCA ATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCT ]
[+] EMBL CD112047 [ ACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAagg ]
[-] EMBL CD130493 [ GGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGC ]
[+] EMBL CD069774 [ ATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTACACCA GAGCA ]
[+] EMBL CD083862 [ gGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACT ]
[-] EMBL CD066487 [ ATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAG ]
[-] EMBL CD130462 [ AGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCCTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGC ]
[-] EMBL CD066697 [ GTTTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAG ]
[-] EMBL CD074043 [ CAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCA GAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGACTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGAC CCTCATGTAAATTCGGGCTGCTTCAAAGTCTAAATTCTTTGCTTATTATTGGATAGAAACGTAATAATTATGAAATATAAAAC ]
[-] EMBL CD073586 [ ATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTGNCAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCA GAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGACTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGAC CCTCATGTAAATTCGGGCTGCTTCAAAGTTTAAATTCTTTGCTTATTATTGGATAGAAACGTAATAATTATGAAATATAAAAC ]
[+] EMBL BG931454 [ aTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCA GAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGACTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGAC CCCCAatccatca ]
[-] EMBL BF936555 [ TAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCA GAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGGCTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGGACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGACCCTCCTCATGTAAATTCGGGCTGCTTCAAAGTTTAAATTCTTTGCTTATTATTGGATAGAAACGTAATAATTATGAAATATAAAACTAATCAGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGGCAGCTGCATTACCGTACTGCGT]
[-] EMBL CD141679 [ TTTGTACTCCTGCATCACTTAACCATTGNCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCA GAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGGCTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCTTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAG ]
[-] EMBL AI395137 [ ctGTAATGAGCCCA TTAT CTTCTCAGTTTGTATGCAATAAG ATATGCCGTTGCGTTG AATTAAGAGGTTACTGGGTCTTGAAGTTCCACCAGGAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAGAAAAAGCTGTTGCCATACATTGAAGAACGCTTATTGGCTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATGTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGACCCTCCTCATGTAAATTCGGGCTGCTTCAAAGTCTAAATTCTTTGCTTATTATTGGATAGAAACGTAATAATTATGAAATATAAAACTAATCAGTGAAAAAAAAAAAAAAAA ]
[-] EMBL AI395098 [ CCA GAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGGCTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGACCCTCCTCATGTAAATTCGGGCTGCTTCAAAGTCTAAATTCTTTGCTTATTATTGGATAGAAACGTAATAATTCTGAAATATAAAACTAATCAGTGAAAAAAAAAAAAAAAA ]
[-] EMBL CD195613 [ CTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGGCTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATAGCGGGTCACTAGAT ]
consensusID : consensus_11077#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 653 fasta sequence
[TCGTTATTTCAAAAAATAGTTGGATACCAGGCTTTGCCANCCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGATGTATGTCCTGTTAAATCACAGCATGTTTTAGAAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTGCAGG]
[-] EMBL CD188638 [TCGTTATTTCAAAAAATAGTTGGATACCAGGCTTTGCCANCCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGATGTATGTCCTGTTAAATCACAGCATGTTTTAGAAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTAGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTGCAGG]
[+] EMBL CD177868 [ acgacctgTGTTTTAGAAAAAACTCACTCCACGAGAGTGTTTAAAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCc ]
[+] EMBL CD077472 [ CTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCA ]
consensusID : consensus_11077#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 307 fasta sequence
[TGTTTCCTGGTGTTTAGAATATGCCGTTGGCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCAGAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAGAAAAGCTGTTGCCATACATTGAAGAACGCTTATTGACTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGACCCTCATGTAAATTCGGG]
[+] EMBL CD139879 [TGTTTCCTGGTGTTTAGAATATGCCGTTGGCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCAGAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAGAAAAGCTGTTGCCATACATTGAAGAACGCTTATTGACTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGACCCTCATGTAAATTCGGG]
consensusID : consensus_11077#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 234 fasta sequence
[TCGTTGATTTCAAAAGTAAGGGTCTGTAGTGAGAATAGTTGGATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGATAAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGC]
[+] EMBL CD097845 [TCGTTGATTTCAAAAGTAAGGGTCTGTAGTGAGAATAGTTGGATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGATAAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11077#1 ----------------------TCGTT-ATTTCAAAAAATAGTTGGATACCAGGCTTTGC 37
consensus_11077#3 -TCGTTGATTTCAAA--AGTAAGGGTC-TGTAGTGAGAATAGTTGGATACCAGGCTTTGC 56
consensus_11077#0 CTCCNAGGCCANAATTTGGCACTCGTTGATTTCAAAAAATAGTTGGATACCAGGCTTTGC 60
consensus_11077#2 ------------------------------------TGTTTCCTGGTGTTTAGAATATGC 24
* *** ** * ***
consensus_11077#1 CANCCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGA-GAACAGAAGGCGGATTTACT 96
consensus_11077#3 CAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACT 116
consensus_11077#0 CAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACT 120
consensus_11077#2 C-GTTGGCTGAAATTAA-GAGGTTACTGGGTCCTGAAGTTCCACCAGAGCAAGCTGGCTT 82
* *** * * * ** * ** *** * ** ** * * *
consensus_11077#1 ATTCTGTTTACTACGTAGTTCTTGTTGTCAAGATGTATGTCCTGTTAAATCACAGCATGT 156
consensus_11077#3 ATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT-------------------------- 150
consensus_11077#0 ATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT-------------------------- 154
consensus_11077#2 TGTTGGTTTTACTCGTGGTTCTC-CAGAAAAGCTGT----------------TGCCATAC 125
* **** *** ***** * *** *
consensus_11077#1 TTTAGAAAAAACTCA----CTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAG 212
consensus_11077#3 -----AAAAAACTCA----CTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAG 201
consensus_11077#0 -----AAAAAACTCA----CTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAG 205
consensus_11077#2 ATTGAAGAACGCTTATTGACTTTTTCTTGATATTTCGT-CGTTTAGACTTTCCCTATTTT 184
* ** ** * ** * *** * ** ******* *
consensus_11077#1 TGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATT 272
consensus_11077#3 TGCGCATCACTCAGGCACGCTTTTTACCGTTGC--------------------------- 234
consensus_11077#0 TGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATT 265
consensus_11077#2 TCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATA 244
* ** * ** * ** ** * ***
consensus_11077#1 AGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGC 332
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 AGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGC 325
consensus_11077#2 GATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGACCCTCATGTAAATTC 304
consensus_11077#1 GTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGG 392
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 GTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGG 385
consensus_11077#2 GGG--------------------------------------------------------- 307
consensus_11077#1 CACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCT 452
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 CACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCT 445
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 TTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCG 512
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 TTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCG 505
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 TGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACG 572
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 TGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACG 565
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 CATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGT 632
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 CATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGT 625
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 TATTAGTCATGGCGGTGCAGG--------------------------------------- 653
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 TATTAGTCATGGCGGTGCAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCG 685
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 ------------------------------------------------------------
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 ACTAATCGTCGTTGTAAATGACACGTTGATGGATAATCATCAGGAGGAACTTGCACTTGC 745
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 ------------------------------------------------------------
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 TTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATG 805
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 ------------------------------------------------------------
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 GACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTGGC 865
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 ------------------------------------------------------------
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 TGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCAGAGCAAGCTGGCTTTGTTGGTTT 925
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 ------------------------------------------------------------
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 TACTCGTGGTTCTCCAGAAAAGCTGTTGCCATACATTGAAGAACGCTTATTGGCTTTTTC 985
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 ------------------------------------------------------------
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 TTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATA 1045
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 ------------------------------------------------------------
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 TTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCAT 1105
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 ------------------------------------------------------------
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 TAGATTTCAGTTTCGAGACCCTCATGTAAATTCGGGCTGCTTCAAAGTCTAAATTCTTTG 1165
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 ------------------------------------------------------------
consensus_11077#3 ------------------------------------------------------------
consensus_11077#0 CTTATTATTGGATAGAAACGTAATAATTATGAAATATAAAACTAATCAGTGAAAAAAAAA 1225
consensus_11077#2 ------------------------------------------------------------
consensus_11077#1 ----------------------------------------------
consensus_11077#3 ----------------------------------------------
consensus_11077#0 AAAAAAAAAAAAAAAAAAACATGGCAGCTGCATTACCGTACTGCGT 1271
consensus_11077#2 ----------------------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||