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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11078#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 26 consensus length = 2482 fasta sequence
[TTGATTATTTGTATCGAAATCAAAGTCTATGTTTGGTGAATTTGTTGAATGAATAGTTCTACGTTCTGGTGTAAGCCTAGGGAAAGGTGTAGTCTCTAAGATAGTTCCTATACCATTGTTAAATCCTGAAGACGTGTTATTATTGGTATTTGTAATTAAACGACGTGCAGCAACAGAGGTAGTGTGACAACCCGCCTGGCTAGTTGATGTCCCCATTCCGCTTCGACCTGCAATATTGGCACAAGGTTGATTACGATGTAATTCTCCAGCCCCAACTACATCACTTCCACGTGTAGAAGAAGCACATTGATTTGATGAAGTTCCATTACCACTAGTACCAGAACCTGCGGTATTCAAAGTTGCGGATCTTTCCAATAATAAACCTGCATGATAAGCGCCACCAGTACCACTAGATATATTTGCACCATGATGTACTTTATTAGTGCGAGTAGTCATAGGAACAAGTGCAGGAGTAACATGGCTTCGAATTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTTAGCACTTCCGCTTGATGACCCAGATGTAGATTTATCAGATGAAGGCGATAAAGCAGATCCACCAGAAAGACCAGTGATACCAGAAAGAGCGACTGAGTTCCTAGGATTAGCATTATCAAATGCACATGTATTGCGTCCACTTGCATTTGCATTGATCGGTTGACGTCTAACAGAATGTTGTTGATCTCCAGATGTTGGAGTTGTTGTCCCATAATTCATAGTATGAGTACGGCGTGCCATAGCTGAGTTGGAGTACGGTGATGATTTCGTGTTAGCACCCAGACCTTGTGAAGTGATAGGAATGGGTTTTCTCTGGCCGGCAGTAGTTGGACGAACCGTGCTGGTACCTGCATCAATACTTGTTCGTTGACCTGGAACATTTGGATAAGCTGTAAGCCCACCCCCACCAACAACTGGAGTGGCCATTTCATCAGTAAAGCCTCGTAATCGTGCCAAAATTCGGCTGGATTCTTCTCTACCAGGACGATCTGAAGCACGGACAAGGTCATTTCGCATCAGCTTAATTGATTCAACATTACTAGATGGACAAGATGCTTCAATTGCATTAAGAGCTGTATTGTAATTTACATTCGCGTTTCCACTTGAAGATGAATATGTGTTTGTAGATGCCAAACTGACAGGTGAAATGGGACTTATTGTACTGGTACCTGTAGTTCCTGAACTTTCCGACCCAGAAGTGCAAGATGAGGGAGTGATTATATTCACAGCTGGTTTGTTATTGGCACCATTATTGACTACAGTTACTGTACTAGGTGGTGTTGTACTTGTAGAACGAGTGGCACTTCCAGGATTGACCGTAAATTTCGAGCTTGAATGTGCGTTTTGA-TTCATTGGTCCAGTATCAGCATTTGTAGGTAAAACAGACAACGTATCGTCTGGGCAAATATTTGAGGTATGTTCCACACTCGCACAATTAACACCACCAGTTGAGATTAGTGGACTAGCC-GCAGGATTTGATGTAGCAGAAAGTAAATGAGTACTTTGCCTTAAAGAAAGACTTGAACCATCACGTGAACTTGTATCAAGTGAAGAACGTCTTCTATCAAGGAGGAGATAAGTAGCCATTATGTCGTCAAAGTTGCCTTGAGTTAAAGACTTCTCTATTTCATCACGACTGAAACCCATATTGACCATAATCTCAATACGTACAGGATCAGTGTAATCTGGTTCCGGTTCTATGTACGGTGACAATACATTATCTTCATAACCAGTATTCATCCAACGATCTTTCATCACCATCTCTAAAGTGTATCGTTTACTTGGA-TTAAGGACCAACA-TTTTCTTCAAC-AAACTTTCGCAGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAAACACGTTCACGCAATTCTCTAAGCGTCTGACCATCGAATGGAAGAGACCCGCTGACTAATGTGTACAAAATAACACCCAACGACCACACATCAACTTCAGGACCATCATATTTCTTACCTTGAAATAATTCTGGGGCTGCATAAGGAGGACTTCCACAAAAAGTATCTAATTTTGTGCCTGGACTAAATTCATTAGAAAAGCCAAAATCAGCCAGTTTTATGTTCATATCGGCATCAAGAAGCAGATTTTCGGCTTTTAAATCTCTGTGAATAATATGTTTTTGATGACAGTACTGAACAGCAGAAACAATTTGACGGAATTTAGCCCGTGCTTCTTTCTCTTTCATTCTACCATGAGCAACCAAATAATCAAAAACCTCACCACCACTGGCATATTCCATTACCAAATATAAAATCTTATCGTTGTCAATAATTTCAAATAGTTTTACGATGTTTGGATGGTCCAGCAATTTCATCAGTCTAACTTCTCGGAAAAGCTTTTGGCGGCTTGAAGGACTTAACTGGGTTTTATCAATAATTTTGATAGCGACTTGTTGGCCCGTAATAACATGACTAGCTAAT]
[+] EMBL CD059335 [TTGATTATTTGTATCGAAATCAAAGTCTATGTTTGGTGAATTTGTTGAATGAATAGTTCTACGTTCTGGTGTAAGCCTAGGGAAAGGTGTAGTCTCTAAGATAGTTCCTATACCATTGTTAAATCCTGAAGACGTGTTATTATTGGTATTTGTAATTAAACGACGTGCAGCAACAGAGGTAGTGTGACAACCCGCCTGGCTAGTTGATGTCCCCATTCCGCTTCGACCTGCAATATTGGCACAAGGTTGATTACGATGTAATTCTCCAGCCCCAACTACATCACTTCCACGTGTAGAAGAAGCACATTGATTTGATGAAGTTCCATTACCACTAGTACCAGAACCTGCGGTATTCAAAGTTGCGGATCTTTCCAATAATAAACCTGCATGATAAGCGCCACCAGTACCACTAGATATATTTGCACCATGATGTACTTTATTAGTGCGAGTAGTCATAGGAACAA ]
[+] EMBL CD189219 [ GTCCCCATTCCGCTTCGACCTGCAATATTGGCACAAGGTTGATTACGATGTAATTCTCCAGCCCCAACTACATCACTTCCACGTGTAGAAGAAGCACATTGATTTGATGAAGTTCCATTACCACTAGTACCAGAACCTGCGGTATTCAAAGTTGCGGATCTTTCCAATAATAAACCTGCATGATAAGCGCCACCAGTACCACTAGATATATTTGCACCATGATGTGCTTTATTAGTGCGAGTAGTCATAGGAACAAGTGCAGGAGTAACATGGCTTCGAATTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTTAGCACTTCCGCTTGATGACCCAGATGTAGATTTATCAGATGAAGGCGATAAAGCAGATCCACCAGAAAGACCAGTGATACCAGAAAGAGCGACTGGGTTCCTAGGATTAGCATTATCAAATGCACATGTATTGCGTCCACTTGCATTTGCATTGATCGGTTGACGTCTAACAGAATGg ]
[+] EMBL CD147844 [ CTAGATATATTTGCACCATGATGTACTTTATTAGTGCGAGTAGTCATAGGAACAAGTGCAGGAGTAACATGGCTTCGAATTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTTAGCACTTCCGCTTGATGACCCAGATGTAGATTTATCAGATGAAGGCGATAAAGCAGATCCACCAGAAAGACCAGTGATACCAGAAAGAGCGACTGAGTTCCTAGGATTAGCATTATCAAATGCACATGTATTGCGTCCACTTGCATTTGCATTGATCGGTTGACGTCTAACAGAATGTTGTTGATCTCCAGATGTTGGAGTTGTTGTCCCATAATTCATAGTATGAGTACGGCGTGCCATAGCTGAGTTGGAGTACGGTGATGATTTCGTGTTA ]
[+] EMBL CD123382 [ GTGCAGGAGTAACATGGCTTCGAATTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTTAGCACTTCCGCTTGATGACCCAGATGTAGATTTATCAGATGAAGGCGATAAAGCAGATCCACCAGAAAGACCAGTGATACCAGAAAGAGCGACTGAGTTCCTAGGATTAGCATTATCAAATGCACATGTATTGCGTCCACTTGCATTTGC ]
[+] EMBL CD123432 [ GTGCAGGAGTAACATGGCTTCGAATTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTTAGCACTTCCGCTTGATGACCCAGATGTAGATTTATCAGATGAAGGCGATTAAGCAGATCCACCAGAAAGACCAGTGATACCAGAAAGAGCGACTGAGTTCCTAGGATTAGCATTATCAAATGCACATGTATTGCGTCCACTTGCATTTGC ]
[+] EMBL CD123447 [ GTGCAGGAGTAACATGGCTTCGAATTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTTAGCACTTCCGCTTGATGACCCAGATGTAGATTTATCAGATGAAGGCGATTAAGCAGATCCACCAGAAAGACCAGTGATACCAGAAAGAGCGACTGAGTTCCTAGGATTAGCATTATCAAATGCACATGTATTGCGTCCACTTGCATTTGC ]
[-] EMBL CD183356 [ ATCAAATGCACATGTATTGCGTCCACTTGCATTTGCATTGATCGGTTGACGTCTAACAGAATGTTGTTGATCTCCAGATGTTGGAGTTGTTGTCCCATAATTCATAGTATGAGTACGGCGTGCCATAGCTGAGTTGGAGTTTGGTGATGATTTCGTGTTAGCACCCAGACCTTGTGAAGTGATAGGAATGGGTTTTCTCTGGCCGGCAGTAGTTGGACGAACCGTGCTGGTACCTGCATCAATACTTGTTCGTTGACCTGGAACATTTGGATAAGCTGTAAGCCCACCCCCACCAACAACTGGAGTGGCCATTTCATCAGTAAAGCCTCGTAATCGTGCCAAAATTCGGCTGGA ]
[-] EMBL CD170145 [ GAACCGTGCTGGTACCTGCATCAATACTTGTTCGTTGACCTGGAACATTTGGATAAGCTGTAAGCCCACCCCCACCAACAACTGGAGTGGCCATTTCATCAGTAAAGCCTCGTAATCGTGCCAAAATTCGACTGGATTCTTCTCTACCAGGACGATCTGAAGCACGGACAAGGTCACTTCGCATCAGCTTAATTGATTCAACATTACTAGATGGACAAGATGCTTCAATTGCATTAAGAGCTGTATTGTAATTTACATTCGCGTTTCCACTTGAAGATGAATATGTGTTCGTAGATGCCAAACTGACAGGTGAAATGGGACTTA ]
[-] EMBL CD095524 [ TTGTTCGTTGACCTGGAACATTTGGATAAGCTGTAAGCCCACCCCCACCAACAACTGGAGTGGCCATTTCATCAGTAAAGCCTCGTAATCGTGCCAAAATTCGGCTGGATT TTCTCTACCAGGACGATCTGAAGCACGGACAAGGTCATTTCGCATCAGCTTAATTGATTCAACATTACTAGATGGACAAGATGCTTCAATTGCATTAAGAGCTGTATTGTAATTTACATTCGCGTTTCCACTTGAAGATGAATATGTGTTTGTAGATGCCAAACTG ]
[+] EMBL CD189100 [ ATAAGCTGTAAGCCCACCCCCACCAACAACTGGAGTGGCCATTTCATCAGTAAAGCCTCGTAATCGTGCCAAAATTCGGCTGGATTCTTCTCTACCAGGACGATCTGAAGCACGGACAAGGTCATTTCGCATCAGCTTAATTGATTCAACATTACTAGATGGACAAGATGCTTCAATTGCATTAAGAGCTGTATTGTAATTTACATTCGCGTTTCCACTTGAAGATGAATATGTGTTTGTAGATGCCAAACTGACAGGTGAAATGGGACTTATTGTACTGGTACCTGTAGTTCCTGAACTTTCCGACCCAGAAGTGCAAGATGAGGGAGTGATTATATTCACAGCTGGTTTGTTATTGGCACCATTATTGACTACAGTTACTGTACTAGGTGGTGTTGTACTTGTAGAACGAGTGGCACTTCCAGGATTGACCGTAAATTTCGAGCTTGAATGTGCGTTTTGA TTCATTGGTCCAGTATCAGCATTTGTAGGTAAAACAGACAACGTATCGTCTGGGCAAATATTTGAGGTATGTTCCACACTCGCACAATTAACACCACCAGTTGAGATTAGTGGACTAGCCNGCAGaaa ]
[+] EMBL CD097621 [ ATGAAGGAGTGATTATATTCACAGCTGGTTTGTTATTGGCACCATTATTGACTACAGTTACTGTACTAGGGGGTGTTGTACTTGTAGAACGAGTGGCACTTCCAGGGTTGACgga ]
[-] EMBL CD181663 [ GTAAATTTCGAGCTTGAATGTGCG TTTGATTTCATTGGTCCAGTATCAGCATTTGTAGGTAAAACAGACAACGTATCGTCTGGGCAAATATTTGAGGTATGTTCCACACTCGCACAATTAACACCACCAGTTGAGATTAGTGGACTAGCC GCAGGATTTGATGTAGCAGAAAGTAAATGAGTACTTTGCCTTAAAGAAAGACTTGAACCATCACGTGAACTTGTATCAAGTGAAGAACGTCTTCTATCAAGGAGGAGATAAGTAGCCATTATGTCGTCAAAGTTGCCTTGAGTTAAAGACTTCTCTATTT ]
[-] EMBL CD189447 [ CAGCATNTGTAGGTAAAACAGACAACGTATCGTCTGGGCAAATATNTGAGGTATGTTCCACACTCGCACAATTAACACCACCAGTTGAGATTAGTGGACTAGCC GCAGGATTTGATGTAGCAGAAAGTAAATGAGTACTTTGCCTTAAAGAAAGACTTGAACCATCACGTGAACTTGTATCAAGTGAAGAACGTCTTCTATCAAGGAGGAGATAAGTAGCCATTATGTCGTCAAAGTTGCCTTGAGTTAAAGACTTCTCTATTTCATCACGACTGAAACCCATATTGACCATAATCTCAATACGTACAGGATCAGTGTAATCTGGTTCCGGTTCTATGTACGGTGACAATACATTATCTTCATAACCAGTATTCATCCAACGATCTTTCATCACCATCTCTAAAGTGTATCGTTTACTTGGA TTAAGGACCAACA TTTTCTTCAAC AAACTTTCGCAGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAACCACGTTCACGCAATT ]
[+] EMBL CD128108 [ AACGTATCGTCTGGGCAAATATTTGAGGTATGTTCCACACTCGCACAATTAACACCACCAGTTGAGATTAGTGGACTAGCC GCAGGATTTGATGTAGCAGAAAGTAAATGAGTACTTTGCCTTAAAGAAAGACTTGAACCATCACGTGAACTTGTATCAAGTGAAGAACGTCTTCTATCAAGGAGGAGATAAGTAGCCATTATGTCGTCAAAGTTGCCTTGAGTTAAAGACTTCTCTATTTCATCACGACTGAAACCCATATTGGCCATAATCTCAATACGTACAGGATCAGTGTAATCTGGTTCCGGTTCTATGTACGGTGACAATACATTATCTTCATAACCAGTATTCATCCAACGATCTTTCATCACCATCTCTAAAGTGTATCGTTTACTTGGA TTAAGGACCAACA TTTTCTTCAAC AAACTTTCGCAGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAAACACGTTCACGCAATTCTCTAAGCGTCTGACCATCGAATGGAAGAGACCCGCTGACTAATGTGTACAAAATAACACCCAACGACCACACAT ]
[+] EMBL CD127783 [ tacttTCGTCTGGGCGAATATTTGAGGTCTGTTCCACACTCGCACAATTAACACCACCAGTTGAGATTAGTGGACTAGCC GCAGGATTTGATGTAGCAGAAAGTAAATGAGTACTTTGCCTTAAAGAAAGACTTGAACCATCACGTGAACTTGTATCAAGTGAAGAACGTCTTCTATCAAGGAGGAGATAAGTAGCCATTATGTCGTCAAAGTTGCCTTGAGTTAAAGACTTCTCTATTTCATCACGACTGAAACCCATATTGACCATAATCTCAATACGTACAGGATCAGTGTAACCTGGTTCCGGTTCTATGTACGGTGACAATACATTATCTTCATAACCAGTATTCATCCAACGATCTTTCATCACCATCTCTAAAGTGTATCGTTTACTTGGA TTAAGGACCAACA TTTTCTTCAAC AAACTTTCGCAGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAAACACGTTCACGCAATTCTCTAAGCGTCTGACCATCGAATGGAAGAGACCCGCTGACTAATGTGTACAAAATAACACCCAACGACCACACAT ]
[+] EMBL CD155713 [ CATTATGTCGTCAAAGTTGCCTTGAGTTAAAGACTTCTCTATTTCATCACGACTGAAACCCATATTGACCATAATCTCAATACGTACAGGATCAGTGTAATCTGGTTCCGGTTCTATGTACGGTGACAATACATTATCTTCATAACCAGTATTCATCCAACGATCTTTCATCACCATCTCTAAAGTGTATCGTTTACTTGGA TTAAGGACCAACA TTTTCTTCAAC AAACTTTCGCAGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAAACACGTTCACGCAATTCTCT AGCG ]
[+] EMBL CD184880 [ TCTCTATTTCATCACGACTGAAACCCATATTGACCATAATCTCAATACGTACAGGATCAGTGTAATCTGGTTCCGGTTCTATGTACGGTGACAATACATTATCTTCATAACCAGTATTCATCCAACGATCTTTCATCACCATCTCTAAAGTGTATCGTTTACTTGGA TTAAGGACCAACA TTTTCTTCAAC AAACTTTCGCAGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAAACACGTTCACGCAATTCTCTAAGCGTCTGACCATCGAATGGAAGAGACCCGCTGACTAATGTGTACAAAATAACACCCAACGACCACACATCAACTTCAGGACCATCATATTTCTTACCTTGAAATAATTCTGGGGCTGCATAAGGAGGACTTCCACAAAAAGTATCTAATTTTGTGCCTGGACTAAATTCATTAGAAAAGCCAAAATCAG ]
[+] EMBL CD119998 [ CATCCAACGATCTTTCATCACCATCTCTAAAGTGTATCGTTTACTTGGA TTAAGGACCAACA TTTTCTTCAAC AAACTTTCGCAGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAAACACGTTCACGCAATTCTCTAAGCGTCTGACCATCGAATGGAAGAGACCCGCTGACTAATGTGTACAAAATAACACCCAACGACCACACATCAACTTCAGGACCATCATATTTCTTACCTTGAAATAATTCTGGGGCTGCATAAGGAGGACTTCCACAAAAAGTATCTAATTTTGTGCCTGGACT AATTCATTAGAAAAGCCAAAATCAGCCAGTTTTATGTTCATATCGGCATCAAGAAGCAGATNTTCGGCTTTTAAATCTCTGTGAAT ATATGTTT ]
[-] EMBL CD158276 [ ATCCAACGATCTTTCATCACCATCTCTAAAGTGTATCGTTTACTTGGA TTAAGGACCAACA TTTTCTTCAAC AAACTTTCGCAGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAAACACGTTCACGCAATTCTCTAAGCGTCTGACCATCGAATGGAAGAGACCCGCTGACTAATGTGTACAAAATAACACCCAACGACCACACATCAACTTCAGGACCATCATATTTCTTACCTTGAAATAATTCTGGGGCTGCATAAGGAGGACTTCCACAAAAAGTATCTAATTTCGTGCCTGGACTAAACTCATTAGAAAAGCCAAAATCAGCCAGTTTTATGTTCATATCGGCATCA ]
[-] EMBL CD120476 [ TCCAACGATCTTTCATCACCATCTCTAAAGTGTATCG TTACTNGGANTTAAGGACC ACATTTTTCTTCANCNAAACTTTCGCAGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAAACACGTTCACGC ATTCTCTAAGCGTCTGACCATCGAATGGAAGAGACCCGCTGACTAATGTGTACAAAATAACACCCAACGACCACACATCAACTTCAGGACCATCATATTTCTTACCTTGAAATAATTCTGGGGCTGCATAAGGAGGGCTTCCACAAAAAGTATCTAATTTTGTGCCTGGACTAAATTCATTAGAAAAGCCAAAATCAGCCAGTTTTATGTTCATATCGGCATCAAGAAGCAGATTTTCGGCTTTTAAATCTCTGTGAATAATATGTTTT ]
[-] EMBL CD112417 [ CAAC AAACTTTCGCAGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAAACACGTTCACGCAATTCTCTAAGCGTCTGACCATCGAATGGAAGAGACCCGCTGACTAATGTGTACAAAATAACACCCTACGACCACACATCAACTTCAGGACCATCATATTTCTTACCTTGAAATAATTCTGGGGCTGCATAAGGAGGACTTCCACAAAAAGTATCTAATTTTGTGCCTGGACTAAATTCATTAGAAAAGCCAAAATCAGCCAGTTTTATGTTCATATCGGCATCAAGAAGCAGATTTTCGGCTTTTAAATCTCTGTGAATAATATGTTTTTGATGACAGTACTGAACAGCAGAAACAATTTGACGGAATTTAGCCCGTGCTTCTTTCTCTTTCATTCTACCATGAGCAACCAAATAATCA ]
[-] EMBL CD120105 [ CAAC AAACTTTCGCAGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAAACACGTTCACGCAATTCTCTAAGCGTCTGACCATCGAATGGAAGAGACCCGCTGACTAATGTGTACAAAATAACACCCAACGACCACACATCAACTTCAGGACCATCATATTTCTTACCTTGAAATAATTCTGGGGCTGCATAAGGAGGACTTCCACAAAAAGTATCTAGTTTTGTGCCTGGACTAAATTCATTAGAAAAGCCAAAATCAGCCAGTTTTATGTTCATATCGGCATCAAGAAGCAGATTTTCGGCTTTTAAATCTCTGTGAATAATATGTTTT ]
[+] EMBL CD067585 [ TTCTGGGGCTGCATAAGGAGGACTTCCACAAAAAGTATCTAATTTTGTGCCTGGACTAAATTCATTAGAAAAGCCAAAATCAGCCAGTTTTATGTTCATATCGGCATCAAGAAGCAGATTTTCGGCTTTTAAATCTCTGTGAATAATATGTTTTTGATGACAGTACTGAACAGCAGAAACAATTTGACGGAATTTAGCCCGTGCTTCTTTCTCTTTCATTCTACCATGAGCAACCAAATAATCAAAAACCTCACCACCACTGGCATATTCCATTACCAAATATAAAATCTTATCGTTGTCAATAATTTCAAATAGTTTTACGATGTTTGGATGGTCCAGCAATTTCATCAGTCTAACTTCTCGGAAAAGCTTTTGGCGGCTTGAAGGACTTAACTGGGTTTTATCAATAATTTTGATAGCGACTTGTTGGCCCGTAATAACATGACTAGCTAAT]
[+] EMBL CD067584 [ TTCTGGGGCTGCATAAGGAGGACTTCCACAAAAAGTATCTAATTTTGTGCCTGGACTAAATTCATTATAAAAGCCAAAATCAGCCAGTTTTATGTTCATATCGGCATCAAGAAGCAGATTTTCGGCTTTTAAATCTCTGTGAATAATATGTTTTTGATGACAGTACTGAACAGCAGAAACAATTTGACGGAATTTAGCCCGCGCTTCTTTCTCTTTCATTCTACCATGAGCAACCAAATAATCAAAAACCTCACCACCACTGGCATATTCCATTACCAAATATAAAATCTTATCGTTGTCAATAATTTCAAATAGTTTTACGATGTTTGGATGGTCCACCAATTTCATCAGTCTAACTTCTCGGAAAAGCATTTGGCGGCTTGAAGGACTTAACTGGGTTTTATCAATAATTTTGATAGCGACTTGTTGGCCCGTAATAACATGACTAGCTAAT]
[-] EMBL CD120434 [ GAAGCAGATTTTCGGCTTTTAAATCTCTGTGAATAATATGTTTTTGATGACAGTACTGAACAGCAGAAACAATTTGACGGAATTTAGCCCGTGCTTCTTTCTCTTTCATTCTACCATGAGCAACCAAATAATCAAAAACCTCACCACCACTGGCATATTCCATTACCAAATATAAAATCTTATCGTTGTCAAT ]
[-] EMBL CD120144 [ GAAGCAGATTTTCGGCTTTTAAATCTCTGTGAATAATATGTTTTTGATGACAGTACTGAACAGCAGAAACAATTTGACGGAATTTAGCCCGTGCTTCTTTCTCTTTCATTCTACCATGAGCAACCAAATAATCAAAAACCTCACCACCACTGGCATATTCCATTACCAAATATAAAATCTTATCGTTGTCAAT ]
consensusID : consensus_11078#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 487 fasta sequence
[CATCAGTANAGCCTCGTAATCGTGCCAAAATTCGGCTGGATTCTTCTCTACCAGGACGATCTGAAGCACGGACAAGGTCATTTCGCATCAGCTTAATTGATTCAACATTACTAGATGGACAAGATGCTTCAATTGCATTAAGAGCTGTATTGTAATTTACATTCGCGTTTCCACTTGAAGATGAATATGTGTTTGTAGATGCCAAACTGACAGGTGAAATGGGACTTATTGTACTGGTACCTGTAGTTCCTGAACTTTCCGGCCCAGAAGTGCAAGCTGACAAAGAGATAAAGGAAGTAGATAACGATTGTATGCTAACAATACATCGATGGTCTATATTATGCAGAATGATATACAGCAATAATGTATCAAATAAATCTAATAAAACTGAAAAAATAATTACATGAAGGAGTGATTATATTCACAGCTGGTTTGTTATTGGCACCATTATTGACTACAGTTACTGTACTAGGTGGTGTTGTACTTG]
[-] EMBL CD097350 [CATCAGTANAGCCTCGTAATCGTGCCAAAATTCGGCTGGATTCTTCTCTACCAGGACGATCTGAAGCACGGACAAGGTCATTTCGCATCAGCTTAATTGATTCAACATTACTAGATGGACAAGATGCTTCAATTGCATTAAGAGCTGTATTGTAATTTACATTCGCGTTTCCACTTGAAGATGAATATGTGTTTGTAGATGCCAAACTGACAGGTGAAATGGGACTTATTGTACTGGTACCTGTAGTTCCTGAACTTTCCGGCCCAGAAGTGCAAGCTGACAAAGAGATAAAGGAAGTAGATAACGATTGTATGCTAACAATACATCGATGGTCTATATTATGCAGAATGATATACAGCAATAATGTATCAAATAAATCTAATAAAACTGAAAAAATAATTACATGAAGGAGTGATTATATTCACAGCTGGTTTGTTATTGGCACCATTATTGACTACAGTTACTGTACTAGGTGGTGTTGTACTTG]
consensusID : consensus_11078#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 459 fasta sequence
[GTCCCCATTCTAAGCGAACTATACGTTAAATCGTTGCGATTGAAAGATGTTACAGCATGATCGTTGACTCCGCTTCGACCGGCAATATTGGCACAAGGTTGATTACGATGTAATTCTCCAGCCCCAACTACATCACTTCCACGTGTAGAAGAAGCACATTGATTTGATGAAGTTCCATTACCACTAGTACCAGAACCTGCGGTATTCAAAGTTGCGGATCTTTCCAATAATAAACCTGCATGATAAGCGCCACCAGTACCACTAGATATATTTGCACCATGATGTACTTTATTAGTGCGAGTAGTCATAGGAACAAGTGCAGGAGTAACATGGCTTCGAATTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTTAGCACTTCCGCTTGATGACCCAGATGTAGATTTATCAGATGAAGGCGATAAAGCAGATCCACCAGAAAGA]
[+] EMBL CD188567 [GTCCCCATTCTAAGCGAACTATACGTTAAATCGTTGCGATTGAAAGATGTTACAGCATGATCGTTGACTCCGCTTCGACCGGCAATATTGGCACAAGGTTGATTACGATGTAATTCTCCAGCCCCAACTACATCACTTCCACGTGTAGAAGAGGCACATTGATTTGATGAAGTTCCATTACCACTAGTACCAGAACCTGCGGTATTCAAAGTTGCGGATCTTTCCAATAATAAACCTGCATGATAAGCGCCACCAGTACCACTAGATATATTTGCACCATGATGTACTTTATTAGTGCGAGTAGTCATAGGAACAAGTGCAGGAGTAACATGGCTTCGAATTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTTAGCACTTCCGCTTGATGACCCAGATGTAGATTTATCAGATGAAGGCGATAAAGCAGATCCACCAGAAAG ]
[-] EMBL CD183548 [ TCCCCATTCTAAGCGAACTATACGTTAAATCGTTGCGATTGAAAGATGTTACAGCATGATCGTTGACTCCGCTTCGACCTGCAATATTGGCACAAGGTTGATTACGATGT ATTCTCCAGCCCCAACTACATCACCTCCACGTGTAGAAGAAGCACATTGATTTGATGAAGTTCCATTACCACTAGTACCAGAACCTGCGGTATTCAAAGTTGCGGATCTTTCCAATAATAAACCTGCATGATAAGCGCCACCAGTACCACTAGATATATTTGCACCATGATGTACTTTATTAGTGCGAGTAGTCATAGGAACAAGTGCAGGAGTAACATGGCTTCGAATTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTTAGCACTTCCGCTTGATGACCCAGATGTAGATTTATCAGATGGAGGCGATAAAGCAGATCCACCAGAAAGA]
[-] EMBL CD114638 [ TGTAGAAGAAGCACATTGATTTGATGAAGTTCCATTACCACTAGTACCAGAACCTGCGGTATTCAAAGTTGCGGATCTTTCCAATAATAAACCTGCATGATAAGCGCCACCAGTACCACTAGATATATTTGCACCATGATGTACTTTATTAGTGCGAGTAGTCATAGGAACAAGTGCAGGAGTAACATGGCTTCGAATTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTTAGCACTTC ]
consensusID : consensus_11078#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 293 fasta sequence
[AGGGAAAGGTGTAGTCTCTAAGATAGTTCCTATACCATTGTTAAATCCTGAAGACGTGTTATTATTGGTATTTGTAATTAAACGACGTGCAGCAACAGAGGTAGTGTGACAACCCGTCTGGCTAGTTGATGTCCCCATTCTGGAATAGAATTAAAAATTTGTTTTCATTAAAGGGTAAACAATAGATTAGGAAATTAAATATATAATTCAGGAAGGTGGTATTCAACTACATTATTGTGTTAAAGATCGGACATCGATAAACCGAAACGAAAACATTCGCACATTGAATAAAA]
[+] EMBL CD188909 [AGGGAAAGGTGTAGTCTCTAAGATAGTTCCTATACCATTGTTAAATCCTGAAGACGTGTTATTATTGGTATTTGTAATTAAACGACGTGCAGCAACAGAGGTAGTGTGACAACCCGTCTGGCTAGTTGATGTCCCCATTCTGGAATAGAATTAAAAATTTGTTTTCATTAAAGGGTAAACAATAGATTAGGAAATTAAATATATAATTCAGGAAGGTGGTATTCAACTACATTATTGTGTTAAAGATCGGACATCGATAAACCGAAACGAAAACATTCGCACATTGAATAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11078#0 TTGATTATTTGTATCGAAATCAAAGTCTATGTTTGGTGAATTTGTTGAATGAATAGTTCT 60
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 ACGTTCTGGTGTAAGCCTAGGGAAAGGTGTAGTCTCTAAGATAGTTCCTATACCATTGTT 120
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 -----------------------------------------------------CATCAGT 7
consensus_11078#0 AAATCCTGAAGACGTGTTATTATTGGTATTTGTAATTAAACGACGTGCAGCAACAGAGGT 180
consensus_11078#2 ---------------------GTCCCCATTC-TAAGCGAACTATACGTTA-AATCGTTGC 37
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ANAGCCTCGTAATCGTGCCAAAATTCGGCTGGATTCTTCTCTACCAGGACGATCTGAAGC 67
consensus_11078#0 AGTGTGACAACCCGCCTGGCTAGTTGATGTCCCCATTCCGCTTCGACCTGCAATATTGGC 240
consensus_11078#2 GATTGAAAGATGTTACAGCATGATCGTTG-----ACTCCGCTTCGACCGGCAATATTGGC 92
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ACGGACAAGGTCATTTCGCATCAGCTTAATTGATTCAACATTACTAGATGGACAAGATGC 127
consensus_11078#0 ACAAGGTTGATTACGATGTAATTCTCCAGCCCCAACTACATCACTTCCACGTGTAGAAGA 300
consensus_11078#2 ACAAGGTTGATTACGATGTAATTCTCCAGCCCCAACTACATCACTTCCACGTGTAGAAGA 152
consensus_11078#3 -----------------------------------------------------AGGGAAA 7
consensus_11078#1 TTCAATTGCATTAAGAGCTGTATTGTAATTTACATTCGCGTTTCCACTTGAAGATGAATA 187
* * *
consensus_11078#0 AGCACATTGATTTGATGAAGTTCCATTACCACTAGTACCAGAACCTGCGGTATTCAAAGT 360
consensus_11078#2 AGCACATTGATTTGATGAAGTTCCATTACCACTAGTACCAGAACCTGCGGTATTCAAAGT 212
consensus_11078#3 GGTGTAGTC-TCTAAGATAGTTCCTATACCATTG---TTAAATCCTGAAG-ACGTGTTAT 62
consensus_11078#1 TGTGTTTGTAGATGCCAAACTGACAGGTGAAATGGGACTTATTGTACTGGTACCTGTAGT 247
* * * * * * * * * *
consensus_11078#0 TGCGGATCTTTCCAATAATA-AACCTGCATGATAAGCGCCACCAGTACCACTAGATATAT 419
consensus_11078#2 TGCGGATCTTTCCAATAATA-AACCTGCATGATAAGCGCCACCAGTACCACTAGATATAT 271
consensus_11078#3 TATTGGTATTTGTAATTAAACGACGTGCAGCAACAGAGGTAGTGTGACAACCCGTCTGGC 122
consensus_11078#1 TCCTGAACTTTCCGGCCCAGAAGTGCAAGCTGACAAAGAGATAAAGGAAGTAGATAACGA 307
* * *** * * *
consensus_11078#0 TTGCACCATGATG-TACTTTATTAGTGCGAGTAGTCATAGGAACAAGTGCAGGAGTAACA 478
consensus_11078#2 TTGCACCATGATG-TACTTTATTAGTGCGAGTAGTCATAGGAACAAGTGCAGGAGTAACA 330
consensus_11078#3 TAGT----TGATG-TCCCCATTCTG---GAATAGAATTAAAAATT--TGTTTTCATTAAA 172
consensus_11078#1 TTGTATGCTAACAATACATCGATGGTCTATATTATG-CAGAATGATATACAGCAATAATG 366
* * * * * * * * * * * * *
consensus_11078#0 TGGCTTCGAA-TTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTT 537
consensus_11078#2 TGGCTTCGAA-TTTCATGAGATGGTAATCTTCCAGCACCATTGGTTGTAACTTGATTGTT 389
consensus_11078#3 GGGTAAACAA-TAGATTAGGAAATTAAATATATAATTCAGGAAGGTGGTATTCAACTA-- 229
consensus_11078#1 TATCAAATAAATCTAATAAAACTGAAAAAATA-ATTACATGAAGGAGTGATTATATT--- 422
** * * * ** * * * * * * * * *
consensus_11078#0 AGCACTTCCGCTTGATGACCCAGATGTAGATTTATC-AGATGAAGGCGATAAAGCAGATC 596
consensus_11078#2 AGCACTTCCGCTTGATGACCCAGATGTAGATTTATC-AGATGAAGGCGATAAAGCAGATC 448
consensus_11078#3 --CATTATTGTGTTAAAGATCGGACATCGATAAACCGAAACGAAAACATTC--GCACATT 285
consensus_11078#1 --CACAGCTGGTTTGTTATTGGCACCATTATTGACTACAGTTACTGTACTAGGTGGTGTT 480
** * * * ** * * * *
consensus_11078#0 CACCAGAAAGACCAGTGATACCAGAAAGAGCGACTGAGTTCCTAGGATTAGCATTATCAA 656
consensus_11078#2 CACCAGAAAGA------------------------------------------------- 459
consensus_11078#3 GAATAAAA---------------------------------------------------- 293
consensus_11078#1 GTACTTG----------------------------------------------------- 487
consensus_11078#0 ATGCACATGTATTGCGTCCACTTGCATTTGCATTGATCGGTTGACGTCTAACAGAATGTT 716
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 GTTGATCTCCAGATGTTGGAGTTGTTGTCCCATAATTCATAGTATGAGTACGGCGTGCCA 776
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 TAGCTGAGTTGGAGTACGGTGATGATTTCGTGTTAGCACCCAGACCTTGTGAAGTGATAG 836
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 GAATGGGTTTTCTCTGGCCGGCAGTAGTTGGACGAACCGTGCTGGTACCTGCATCAATAC 896
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 TTGTTCGTTGACCTGGAACATTTGGATAAGCTGTAAGCCCACCCCCACCAACAACTGGAG 956
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 TGGCCATTTCATCAGTAAAGCCTCGTAATCGTGCCAAAATTCGGCTGGATTCTTCTCTAC 1016
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 CAGGACGATCTGAAGCACGGACAAGGTCATTTCGCATCAGCTTAATTGATTCAACATTAC 1076
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 TAGATGGACAAGATGCTTCAATTGCATTAAGAGCTGTATTGTAATTTACATTCGCGTTTC 1136
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 CACTTGAAGATGAATATGTGTTTGTAGATGCCAAACTGACAGGTGAAATGGGACTTATTG 1196
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 TACTGGTACCTGTAGTTCCTGAACTTTCCGACCCAGAAGTGCAAGATGAGGGAGTGATTA 1256
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 TATTCACAGCTGGTTTGTTATTGGCACCATTATTGACTACAGTTACTGTACTAGGTGGTG 1316
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 TTGTACTTGTAGAACGAGTGGCACTTCCAGGATTGACCGTAAATTTCGAGCTTGAATGTG 1376
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 CGTTTTGATTCATTGGTCCAGTATCAGCATTTGTAGGTAAAACAGACAACGTATCGTCTG 1436
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 GGCAAATATTTGAGGTATGTTCCACACTCGCACAATTAACACCACCAGTTGAGATTAGTG 1496
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 GACTAGCCGCAGGATTTGATGTAGCAGAAAGTAAATGAGTACTTTGCCTTAAAGAAAGAC 1556
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 TTGAACCATCACGTGAACTTGTATCAAGTGAAGAACGTCTTCTATCAAGGAGGAGATAAG 1616
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 TAGCCATTATGTCGTCAAAGTTGCCTTGAGTTAAAGACTTCTCTATTTCATCACGACTGA 1676
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 AACCCATATTGACCATAATCTCAATACGTACAGGATCAGTGTAATCTGGTTCCGGTTCTA 1736
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 TGTACGGTGACAATACATTATCTTCATAACCAGTATTCATCCAACGATCTTTCATCACCA 1796
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 TCTCTAAAGTGTATCGTTTACTTGGATTAAGGACCAACATTTTCTTCAACAAACTTTCGC 1856
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 AGTCTGTTGACATGTAGAACGGGATGCGATACTTGCCACGTAAAACACGTTCACGCAATT 1916
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 CTCTAAGCGTCTGACCATCGAATGGAAGAGACCCGCTGACTAATGTGTACAAAATAACAC 1976
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 CCAACGACCACACATCAACTTCAGGACCATCATATTTCTTACCTTGAAATAATTCTGGGG 2036
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 CTGCATAAGGAGGACTTCCACAAAAAGTATCTAATTTTGTGCCTGGACTAAATTCATTAG 2096
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 AAAAGCCAAAATCAGCCAGTTTTATGTTCATATCGGCATCAAGAAGCAGATTTTCGGCTT 2156
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 TTAAATCTCTGTGAATAATATGTTTTTGATGACAGTACTGAACAGCAGAAACAATTTGAC 2216
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 GGAATTTAGCCCGTGCTTCTTTCTCTTTCATTCTACCATGAGCAACCAAATAATCAAAAA 2276
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 CCTCACCACCACTGGCATATTCCATTACCAAATATAAAATCTTATCGTTGTCAATAATTT 2336
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 CAAATAGTTTTACGATGTTTGGATGGTCCAGCAATTTCATCAGTCTAACTTCTCGGAAAA 2396
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 GCTTTTGGCGGCTTGAAGGACTTAACTGGGTTTTATCAATAATTTTGATAGCGACTTGTT 2456
consensus_11078#2 ------------------------------------------------------------
consensus_11078#3 ------------------------------------------------------------
consensus_11078#1 ------------------------------------------------------------
consensus_11078#0 GGCCCGTAATAACATGACTAGCTAAT 2482
consensus_11078#2 --------------------------
consensus_11078#3 --------------------------
consensus_11078#1 --------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||