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Schistosoma mansoni
cluster # 11080 cluster # 11080       Sequences # 31       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11080#0 length = 1387 sequences # 30  
consensus_11080#1 length = 402 sequences # 1  

consensusID : consensus_11080#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 30
consensus length = 1387
fasta sequence
                              [ACTGGCTGGCTAGTGACTTAAAAAAGTACTTATCAGAGCATCATCCCGCTCAACCTAGTGTCCTATCTCAAAGACTTATCCATGCGGGTAAGCTTTTGAAAGATGATACGTCAATCTCAGGCATTTGTACTCAGGTCGATGGGCTTCCTACAATCCATCTAGTATACCCCAACCCAAAACTAATGGGCGATTCTAATGTCAACAACTACCGAGCTGACAACACTTTGTTTAATATTCCACCTGAGCAAATGCATAAATATCAGCAGGCGTATTATCATTATTTGCAAACTTTTTATATGGAGAATCCTCCAATAAACCAAACTGAGTGCCATACGCAGGATTACTGTTACCCTTACTATTTTGGGACAGGGACTGTTATGCAAATGCTTC-CCGGGAACTATAATTTCCCTAACAATGCTTATGTCCCACAAGCTCATAGCTCTTTACGCCAAACAACCACAAACAGTT-CAT-CTAGCAATATGCAACAG-TG-GATTCAAAGGGCGCAGGCACTTTTATCCAATTGGGGAGTGTTTAATGGTAATCAGCGTCAGAGGGAAGCGGATGAGGTATTACCTAACGAAGATGGGGTTAACCAAAGAGCTGACCAAATTCAACCCCAAGCAGCACAAGAAATGGTGCTTAATAATGCAATACGAAATAATGATAGACCCGATGAAGAGGTTAACGGGGTGGGAAATATGGACATAATTGATCGTTTTTACATGCTTTTTCGACTTTGTCTTTTCGTGGGGCTTTGTTTCGCATATTCATCTTTGGACAAGGCACTTATTGTGTTCTCAGTCGCTGCTTATGTATATCTGTACAATATCTACCGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGACCGCAACAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA-CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT-AGATATACTGACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAATTTGTCTTTTGTTTCACAAAGTGGCTTCACCTTCATGTCTGTACACACAACATTGGAAAGCAAAAACCTAGAAATTTGTTGAAGGTTCCATTCACAACCCANATTTATTTCAAAAATTTTTTGAGTACTT]

[+] EMBL CD116102             [ACTGGCTGGCTAGTGACTTAAAAAAGTACTTATCAGAGCATCATCCCGCTCAACCTAGTGTCCTATCTCAAAGACTTATCCATGCGGGTAAGCTTTTGAAAGATGATACGTCAATCTCAGGCATTTGTACTCAGGTCGATGGGCTTCCTACAATCCATCTAGTATACCCCAACCCAAAACTAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD111839             [                               ATCAGAGCATCATTTCGCTCAACCTAGTGTCCTATCTCAAAGACTTATCCATGCGGGTAAGCTTTTGAAAGATGATACGTCAATCTCAGGCATTTGTACTCAGGTCGATGGGCTTCCTACAATCCATCTAGTATACCCCAACCCAAAACTAATGGGCGATTCTAATGTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD082277             [                                               GCTCAACCTAGTGTCCTATCTCAAAGACTTATTCATGCGGGTAAACCTTTGAAAGATGATACGTCAATCTCAGGCATTTGTACTCAGGTCGATGGGCTTCCTACAATCCATCTAGTATACCCCAACCCAAAACTAATGGGCGATTCTAATGTCAACAACTACCGAGCTGACAACACTTTGTTTAATATTCCACCTGAGCAAATGCATAAATATCAGCAGGCGTATTATCATTATTTGCAAACTTTTTATATGGAGAATCCTCCAATAAACCAAACTGAGTGCCATACGCAGGATTACTGTTACCCTTACTATTTTGGGACAGGGACTGTTATGCAAATGCTTC CCGGGAACTATAATTTCCCTAACAATGCTTATGTCCCACAAGCTCATAGCTCTTTACGCCAAACAACCACAAACAGTT CAT CTAGCAATATGCAACAG TG GATTCAAAGGGCGCAGGCACTTTTATCCAATTGGGGAGTGTTTAATGGTAATCAGCGTCAGAGGGAAGCGGATGAAGTATTACCTAACGAAGATGGNGTTAACCAAAGAGCTGACCAAATTCAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD171049             [                                                             CCTATCTCAAAGACTTATCCATGCGGGTAAGCTTTTGAAAGATGATACGTCAATCTCAGGCATTTGTACTCAGGTCGATGGGCTTCCTACAATCCATCTAGTATACCCCAACCCAAAACTAATGGGCGATTCTAATGTCAACAACTACCGAGCTGACAACACTTTGTTTAATATTCCACCTGAGCAAATGCATAAATATCAGCAGGCGTATTATCATTATTTGCAAACTTTTTATATGGAGAATCCTCCAATAAACCAAACTGAGTGCCATACGCAGGATTACTGTTACCCTTACTATTTTGGGACAGGGACTGTTATGCAAATGCTTC CCGGGAACTATAATTTCCCTAACAATGCTTATGTCCCACAAGCTCATAGCTCTTTACGCCAAANAAACACAAACAGTT CAT CTAGCAATATGCAACAG TG GATTCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD171051             [                                                             CCTATCTCAAAGACTTATCCATGCGGGCTAGCTTTTGAAAGATGATACGTCAATCTCAGGCATTTGTACTCAGGTCGATGGGCTTCCTACAATCCATCCAGTATACCCCAACCCAAAACTAATGGGCGATTCTAATGTCAACAACTACCGAGCTGACAACACTTTGTTTAATATTCCACCTGAGCAAATGCATAAATATCAGCAGGCGTATTATCATTATTTGCAAACTTTTTATATGGAGAATCCTCCAATAAACCAAACTGAGTGCCATACGCAGGATTACTGTTACCCTTACTATTTTGGGACAGGGACTGTTATGCAAATGCTTC CCGGGAACTATAATTTCCCTAACAATGCTTATGTCCCACAAGCTCATAGCTCTTTACGCCAAACAACCACAAACAGTT CAT CTAGCAATATGCAACAG TG GATTCAAAGGGCGCAGGCACTTTTATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD170847             [                                                                                                                               TACTCAGGTCGATGGGCTTCCTACAATCCATCTAGTATACCCCAACCCAAAACTAATGGGCGATTCTAATGTCAACAACTACCGAGCTGACAACACTTTGTTTAATATTCCACCTGAGCAAATGCATAAATATCAGCAGACGTATTATCATTATTTGCAAACTTTTTATATGGAGAATCCTCCAATAAACCAAACTGAGTGCCATACGCAGGATTACTGTTACCCTTACTATTTTGGGACAGGGACTGTTATGCAAATGCTTC CCGGGAACTATAATTTCCCTAACAATGCTTATGTCCCACAAGCTCATAGCTCTTTACGCCAAACAACCACAAACAGTT CAT CTAGCAATATGCAACAG TG GATTCAAAGGGCGCAGGCACTTTT TCCAATTGGGGAGTGTTTAATGGTAATCAGCGTCAGAGGGAAGCGGATGAGGTATTACCTAACGAAGATGGGGTTAACCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD170860             [                                                                                                                                                    TACAATCCATCTAGTATACCCCAACCCAAAACTAATGGGCGATTCTAATGTCAACAACTACCGAGCTGACAACACTTTGTTTAATATTCCACCTGAGCAAATGCATAAATATCAGCAGGCGTATTATCATTATTTGCAAACTTTTTATATGGAGAATCCTCCAATAAACCAAACTGAGTGCCATACGCAGGATTACTGTTACCCTTACTATTTTGGGACAGGGACTGTTATGCAAATGCTTC CCGGGAACTATAATTTCCCTAACAATGCTTATGTCCCACAAGCTCATAGCTCTTTACGCCAAACAACCACAAACAGTT CAT CTAGCAATATGCAACAG TG GATTCAAAGGGCGCAGGCACTTTTATCCAATTGGGGAGTGTTTAATGGTAATCAGCGTCAGAGGGAAGCGGATGAGGTATTACCTAACGAAGATGGGGTTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD170887             [                                                                                                                                                                                                        AACAACTACCGAGCTGACAACACTTTGTTTAATATTCCACCTGAGCAAATGCATAAATATCAGCAGGCGTATTATCATTACTTGCAAACTTTTTATATGGAGAATCCTCCAATAAACCAAACTGAGTGCCATACGCAGGATTACTGTTACCCTTACTATTTTGGGACAGGGACTGTTATGCATATGCTTC CCGGGAACTATAATTTCCCTAACAATGCTTATGTCCCACAAGCTCATAGCTCTTTACGCCAAACAACCACAAACAGTT TAT CTAGCAATATGCAACAG TG GATTCAAAGGGCGCAGGCACTTTTATCCAATTGGGGAGTGTTTAATGGTAATCAGCGTCAGAGGGAAGCGGATGAGGTATTACCTAACGAAGATGGGGTTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AI068059             [                                                                                                                                                                                                                                          TTCCACCTGAGCAAATGCATAAATATCAGCAGGCGTATTATCATTATTTGCAAACTTTTTATATGGAGAATCCTCCAATAAACCAAACTGAGTGCCATACGCAGGATTACTGTTACCCTTACTATTTTGGGACAGGGACTGTTATGCAAATGCTTC CCGGGAACTATAATTTCCCTAACAATGCTTATGTCCCACAAACTCATAGCTCTTTACGCCAAACAACCACAAACAGTT CAT CTAGCAATATGCAACAG TG GATTCAAAGGGCGCAGGCACTTTTATCCAATTGGGGAGTGTTTAATGGTAATCAGCGTCAGAGGGAAGCGGATGAGGTATTACCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD142221             [                                                                                                                                                                                                                                                                                                                                      TGCCATACGCAGGATTACTGTTACCCTTACTATTTTGGGACAGGGACTGTTATGCAAATGCTTC CCGGGAACTATAATTTCCCTAACAATGCTTATGTCCCACAAACTCATAGCTCTTTACGCCAAACAACCACAAACAGTT CAT CTAGCAATATGCAACAG TG GATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD129034             [                                                                                                                                                                                                                                                                                                                                                                                  GACTGTTATGCAAATGCTTC CCGGGAACTATAATTTCCCTAACAATGCTTATGTCCCGCAAGCTCATAGCTCTTTACGCCAAACAACCAC AATTGTTNNNTNNNNNNNATATGCAACAG TG GATTCAAAGGGCGCAGGCACTTTTATCCAATTGGGGAGTGTTTAATGGTAATCAGCGTCAGAGGGAAGCGGATGAGGTATTACCTAACGAAGATGGGGTTAACCAAAGAGCTGACCAAATTCAACCCCAAGCAGCACAAGAAATGGTGCTTAATAATGCAATACGAAATAATGATAGACCCGATGAAGAGGTTAACGGGGTGGGAAATATGGACATAATTGATCGTTTTTACATGCTTTTTCGACTTTGTCTTTTCGTGGGGCTTTGTTTCGCATATTCATCTTTGGACAAGGCACTTATTGTGTTCTCAGTCGCTGCTTATGTATATCTGTACAATATCTACCGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGACCGCAACAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD198327             [                                                                                                                                                                                                                                                                                                                                                                                                 GCTTCTCCGGGAACTATAATTTCCCTAACAATGCTTATGTCCCACAAACTCATAGCTCTTTACGCCAAACAACCACAAACAGTT CAT CTAGCAATATGCTACAGATGTCATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD116175             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTTNACATGC TTTTCGACTTTGTCTNTTCGTGGGGCTNTGTTNCGCATATTCATCTTTGGACAAGGCACTTATTGTGTTCTCAGTCGCTGCTTATGTATATCTGTACAATATCTACCGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGACCGCAACAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGACCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATACTGACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAATTTGTCTTTTGTTTCACAAAGTGGC                                                                                                         ]
[+] EMBL CD081970             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTTATTGTGTTCTCAGTCGCTGCTTATGTATATCTGTACAATATCTACCGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGACCGCAACAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATACTGACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAATTTGTCTTTTGTTTCACAAAGTGGCTTCACCTTCATGTCTGTACACACAACATTGGAAAGCAAAAACCTAGAAATTTGTTGAAGGTTCCATTCACAACCCANAT                          ]
[+] EMBL CD143559             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGCTGCTTATGTATATCTGTACAATATCTACCGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGACCGCAACAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATAT                                                                                                                                                                                              ]
[+] EMBL CD143467             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGCTGCTTATGTATATCTGTACAATATCTACCGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGACCGCAACAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATAT                                                                                                                                                                                              ]
[-] EMBL CD143469             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCTGCTTATGTATATCTGTACAATATCTACCGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGACCGCAACAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATA                                                                                                                                                                                             ]
[-] EMBL CD143455             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCTGCTTATGTATATCTGTACAATATCTACCGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGACCGCAACAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATA                                                                                                                                                                                             ]
[-] EMBL CD143436             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCTGCTTATGTATATCTGTACAATATCTACCGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGACCGCAACAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATA                                                                                                                                                                                             ]
[-] EMBL CD143521             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCTGCTTATGTATATCTGTACAATATCTACCGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCACCGACGACCGCAACAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGGTCAAGCAAACGTTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATA                                                                                                                                                                                             ]
[-] EMBL CD143563             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCTGCTTATGTATATCTGTACAATATCTACCGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGACCGCAACAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATA                                                                                                                                                                                             ]
[-] EMBL CD143507             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCTGCTTATGCATATCTGTACAATATCTACAGCAGATATGCTGTTGTAGAGCGTATAGTACACGCCCATCGACGACAGCAACAAAGTCCTCAAGGTGCACAAAGCAATTTGAACCGTCCAGCAAGTGGACAATCGGATAATCAGCAAAACCAGTTTGTTCAGGAATCTACAGGAGATCAGGCAAACGCTAACTTACGTGGTGAACAAGAATATAGGTTTACAAGGATAACTACATATCTGCGATTGGCAGCAAATCATTATTATCAGTTCTTTTCAGCTGTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATA                                                                                                                                                                                             ]
[+] EMBL CD134143             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCc                                                                                                                                                                                                                                                                               ]
[+] EMBL CD145231             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATACTGACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAATTTGTCTTTTGT                                                                                                                      ]
[-] EMBL CD075882             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATACTGACCCTGACACCTCACTTTTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAATTTGTCTTTTGTTTCACAAAGTGGCTTCACCTTCATGTCTGTACACACAACA TGGAAAGCAAAAACCTAGAAATTTGTT AAGGTTCCATTCACAACCCAAATTTATTTCAAAAATTTTTTGAGTACTT]
[+] EMBL CD194472             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATACTGAC                                                                                                                                                                                        ]
[+] EMBL CD135629             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATACTGACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAATTTGTCTTTTGTTTCACAAAGTGG                                                                                                          ]
[+] EMBL AI882662             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAACCTGGATTATTGAACACAATATTTTATTTAATCTGTAATCCTGAGATATACTGACCCTGACACCTCACTTCTTATCCATGTTTTATTTTTAATTa                                                                                                                                                ]
[-] EMBL CD139590             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           naaaatccnCAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTANTCAGTTCTCTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAA CTTGGTTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATACTGACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAATTTGTCTTTTGTTTCACAAAGTGGCTTCACCTTCATGTCTGTA                                                                                       ]
[+] EMBL CD123955             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTTCAATATCTTCTAA CTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCT AGATATACTGACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTATTTTGTCTTTTGCTTCACAAAGTGGCTTCACCTTCATGTCTGTACATTTTACATTGGAAAGC                                                                     ]


>consensus_11080#0 ACTGGCTGGCTAGTGACTTAAAAAAGTACTTATCAGAGCATCATCCCGCTCAACCTAGTG TCCTATCTCAAAGACTTATCCATGCGGGTAAGCTTTTGAAAGATGATACGTCAATCTCAG GCATTTGTACTCAGGTCGATGGGCTTCCTACAATCCATCTAGTATACCCCAACCCAAAAC TAATGGGCGATTCTAATGTCAACAACTACCGAGCTGACAACACTTTGTTTAATATTCCAC CTGAGCAAATGCATAAATATCAGCAGGCGTATTATCATTATTTGCAAACTTTTTATATGG AGAATCCTCCAATAAACCAAACTGAGTGCCATACGCAGGATTACTGTTACCCTTACTATT TTGGGACAGGGACTGTTATGCAAATGCTTCCCGGGAACTATAATTTCCCTAACAATGCTT ATGTCCCACAAGCTCATAGCTCTTTACGCCAAACAACCACAAACAGTTCATCTAGCAATA TGCAACAGTGGATTCAAAGGGCGCAGGCACTTTTATCCAATTGGGGAGTGTTTAATGGTA ATCAGCGTCAGAGGGAAGCGGATGAGGTATTACCTAACGAAGATGGGGTTAACCAAAGAG CTGACCAAATTCAACCCCAAGCAGCACAAGAAATGGTGCTTAATAATGCAATACGAAATA ATGATAGACCCGATGAAGAGGTTAACGGGGTGGGAAATATGGACATAATTGATCGTTTTT ACATGCTTTTTCGACTTTGTCTTTTCGTGGGGCTTTGTTTCGCATATTCATCTTTGGACA AGGCACTTATTGTGTTCTCAGTCGCTGCTTATGTATATCTGTACAATATCTACCGCAGAT ATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGACCGCAACAAAATCCCCAAGGTG CACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTG TTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAGGT TTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAG CTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAA TATCTTCTAACTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCTAGATATACT GACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAATTT GTCTTTTGTTTCACAAAGTGGCTTCACCTTCATGTCTGTACACACAACATTGGAAAGCAA AAACCTAGAAATTTGTTGAAGGTTCCATTCACAACCCANATTTATTTCAAAAATTTTTTG AGTACTT



consensusID : consensus_11080#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 402
fasta sequence
                              [TGGCGAGCCGAAACCAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACATACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAACTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCTAGATATACTGACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAAAAAAAAAAAAAAAAA]

[-] EMBL AI395200             [TGGCGAGCCGAAACCAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACATACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAACTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCTAGATATACTGACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAAAAAAAAAAAAAAAAA]


>consensus_11080#1 TGGCGAGCCGAAACCAAAATCCCCAAGGTGCACAAAGCAATTTGAACCCTCCAGCAAGTG GACAATCGGAGAATCAGCAAAACCAGCTTGTTCAGGAATCTACAGGAGATCAAGCAAACG CTAACATACGTGGTGAACAAGAATCGAGGTTTACAAGGATAACTACAAATCTGCGATTGG CAGCAAATCATTCTTATCAGTTCTTTTCAGCTCTGATTTCCTCAATTATTCCAGAACAAC CACCACCACTACACCTAGACTAGAGTTCAATATCTTCTAACTTGATTATTGAACACAATA TTTTATTTAATCTGTTATCCTAGATATACTGACCCTGACACCTCACTTCTTATCCACGTT TTATTTTTAATTTAACTTAATCCGTAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11080#0      ACTGGCTGGCTAGTGACTTAAAAAAGTACTTATCAGAGCATCATCCCGCTCAACCTAGTG 60
consensus_11080#1      ------------------------------------------------------------
                                                                                   

consensus_11080#0      TCCTATCTCAAAGACTTATCCATGCGGGTAAGCTTTTGAAAGATGATACGTCAATCTCAG 120
consensus_11080#1      ------------------------------------------------------------
                                                                                   

consensus_11080#0      GCATTTGTACTCAGGTCGATGGGCTTCCTACAATCCATCTAGTATACCCCAACCCAAAAC 180
consensus_11080#1      ------------------------------------------------------------
                                                                                   

consensus_11080#0      TAATGGGCGATTCTAATGTCAACAACTACCGAGCTGACAACACTTTGTTTAATATTCCAC 240
consensus_11080#1      ------------------------------------------------------------
                                                                                   

consensus_11080#0      CTGAGCAAATGCATAAATATCAGCAGGCGTATTATCATTATTTGCAAACTTTTTATATGG 300
consensus_11080#1      ------------------------------------------------------------
                                                                                   

consensus_11080#0      AGAATCCTCCAATAAACCAAACTGAGTGCCATACGCAGGATTACTGTTACCCTTACTATT 360
consensus_11080#1      ------------------------------------------------------------
                                                                                   

consensus_11080#0      TTGGGACAGGGACTGTTATGCAAATGCTTCCCGGGAACTATAATTTCCCTAACAATGCTT 420
consensus_11080#1      ------------------------------------------------------------
                                                                                   

consensus_11080#0      ATGTCCCACAAGCTCATAGCTCTTTACGCCAAACAACCACAAACAGTTCATCTAGCAATA 480
consensus_11080#1      ------------------------------------------------------------
                                                                                   

consensus_11080#0      TGCAACAGTGGATTCAAAGGGCGCAGGCACTTTTATCCAATTGGGGAGTGTTTAATGGTA 540
consensus_11080#1      ------------------------------------------------------------
                                                                                   

consensus_11080#0      ATCAGCGTCAGAGGGAAGCGGATGAGGTATTACCTAACGAAGATGGGGTTAACCAAAGAG 600
consensus_11080#1      ------------------------------------------------------------
                                                                                   

consensus_11080#0      CTGACCAAATTCAACCCCAAGCAGCACAAGAAATGGTGCTTAATAATGCAATACGAAATA 660
consensus_11080#1      ------------------------------------------------------------
                                                                                   

consensus_11080#0      ATGATAGACCCGATGAAGAGGTTAACGGGGTGGGAAATATGGACATAATTGATCGTTTTT 720
consensus_11080#1      ------------------------------------------------------------
                                                                                   

consensus_11080#0      ACATGCTTTTTCGACTTTGTCTTTTCGTGGGGCTTTGTTTCGCATATTCATCTTTGGACA 780
consensus_11080#1      ------------------------------------------------------------
                                                                                   

consensus_11080#0      AGGCACTTATTGTGTTCTCAGTCGCTGCTTATGTATATCTGTACAATATCTACCGCAGAT 840
consensus_11080#1      ------------------------------------------------------------
                                                                                   

consensus_11080#0      ATGCTGTTGTAGAGCGTATAGTACACGCCCAACGACGA-CCGCAAC-AAAATCCCCAAGG 898
consensus_11080#1      --------------------------------TGGCGAGCCGAAACCAAAATCCCCAAGG 28
                                                        * *** *** *** *************

consensus_11080#0      TGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCT 958
consensus_11080#1      TGCACAAAGCAATTTGAACCCTCCAGCAAGTGGACAATCGGAGAATCAGCAAAACCAGCT 88
                       ************************************************************

consensus_11080#0      TGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACCTACGTGGTGAACAAGAATCGAG 1018
consensus_11080#1      TGTTCAGGAATCTACAGGAGATCAAGCAAACGCTAACATACGTGGTGAACAAGAATCGAG 148
                       ************************************* **********************

consensus_11080#0      GTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTC 1078
consensus_11080#1      GTTTACAAGGATAACTACAAATCTGCGATTGGCAGCAAATCATTCTTATCAGTTCTTTTC 208
                       ************************************************************

consensus_11080#0      AGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTC 1138
consensus_11080#1      AGCTCTGATTTCCTCAATTATTCCAGAACAACCACCACCACTACACCTAGACTAGAGTTC 268
                       ************************************************************

consensus_11080#0      AATATCTTCTAACTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCTAGATATA 1198
consensus_11080#1      AATATCTTCTAACTTGATTATTGAACACAATATTTTATTTAATCTGTTATCCTAGATATA 328
                       ************************************************************

consensus_11080#0      CTGACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAAT 1258
consensus_11080#1      CTGACCCTGACACCTCACTTCTTATCCACGTTTTATTTTTAATTTAACTTAATCCGTAAA 388
                       *********************************************************** 

consensus_11080#0      TTGTCTTTTGTTTCACAAAGTGGCTTCACCTTCATGTCTGTACACACAACATTGGAAAGC 1318
consensus_11080#1      AAA------AAAAAAAAAAA---------------------------------------- 402
                                     * ***                                         

consensus_11080#0      AAAAACCTAGAAATTTGTTGAAGGTTCCATTCACAACCCANATTTATTTCAAAAATTTTT 1378
consensus_11080#1      ------------------------------------------------------------
                                                                                   

consensus_11080#0      TGAGTACTT 1387
consensus_11080#1      ---------
                                




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)