cluster # 11084

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 11084 cluster # 11084 Sequences # 32 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11084#0 length = 916 sequences # 23
consensus_11084#1 length = 582 sequences # 6

consensus_11084#2 length = 402 sequences # 1
consensus_11084#3 length = 331 sequences # 2

consensusID : consensus_11084#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 23
consensus length = 916
fasta sequence

                              [TTATTTTTTTTTTTTTTTTTTTTTTTAGAACTAATAGGCGTTTTATTAAACATGTTGCAAAAGAAAAACATTGAGAATAGAATATAACAGATATAATTAAAGCATTCAATTAAAAAAGGCTAGCAACCGTATTAAAAAGATCGCTAACCATTGGCCAAGGAAAAAAGACAACAAATGTGAAGTACACAAAGTTAGTTGAAACAGATAACTTGAATGGTACAAAAGAGTTTTCCTAATAGATATTTTACTTTCGTAAAGAAAACAATCCTAAGTATGAGTATTTATCCTGGTAGTAGAATAACTACAATACTTCAAATGATGGATAAAATACAATGAAACCATGTA-CCCTGACAGG-GAAAAACAAAGATTATAGTCCATAAGGAGTAAACATGTTTGAATATTTACTCTATGAGGTGACCATTGCACTTGAGGTGATGCCAGAAGAAGCTTGACGAGAAGACAAACTTGTCCCGGAGATAGCAGCTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGT-AAAGCAGGATGAATGCATGGTAGAACT-CCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATC-ATTTCGAACT-CCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGCAGACATGTACACTGATGCAGCGATGGACGTTCGACGAGCATACCGACCTTTTTTCATATAACGGTG-AACTCTGCTAACAGAAATCACTAAGCCAGCTCTATTGGATTTTGTGTGTTTCTTGCCACCAGCTGCCTTTCTTGCCTTACCTCTTCCTGACATAATTTCCAATCC-GGGTTGACCTCANAAAACAGCCGCCCC]

[+] EMBL AI395077             [TTATTTTTTTTTTTTTTTTTTTTTTTAGAACTAATAGGCGTTTTATTAAACATGTTGCAAAAGAAAAACATTGAGAATAGAATATAACAGATATAATTAAAGCATTCAATTAAAAAAGGCTAGCAACCGTATTAAAAAGATCGCTAACCATTGGCCAAGGAAAAAAGACAACAAATGTGAAGTACACAAAGTTAGTTGAAACAGATAACTTGAATGGTACAAAAGAGTTTTCCTAATAGATATTTTACTTTCGTAAAGAAAACAATCCTAAGTATGAGTATTTATCCTGGTAGTAGAATAACTACAATACTTCAAATGATGGGTAAAATACAATGAAACCAAGTT GCCTGGTAGG G                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL AI977732             [                                                                                 ATATAACAGATATAATTAAAGCATTCAATTAAAAAAGGCTAGCAACCGTATTAAAAAGATCGCTAACCATTGACCAAGGAAAAAAGACAACAAATGTAAAGTACACAAAGTTAGTTGAAACAGATAACTTGAATGGTACAAAAGAGTTTTCTTAATAGATATTTTACTTTCGTAAAGAAAACAATCCTAAGTATGAGTATTTATCCTGGTAGTAGAATAACTACAATACTTCAAATGATGGATAAAATACAATGAAACCATGTA CCCTGACAGG GAAAAACAAAGATTATAGTCCATAAGGAGTAAACATGTTTGAATATTTACTCTATGAGGTGACCATTGCACTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD133065             [                                                                                                                                                                                                                                                                                           gTCCTGGTAGTAGAATAACTACAATACTTCAAATGACGGATAAAATACAATGAAACCATGTANCCCTGACAGGNGAAAAACAAAGATTATAGTCCATAAGGAGTAAACATGTTTGAATA TTACTCTATGAGGTGACCATTGCACTTGAGGTGATGCCAGAAGAAGCTTGACGAGAAGACAAACTTGTCCCGGAGATAGCAGCTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGT AAAGCAGGATGAATGCATGGTAGAACT CCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATCAATTGCGAACT CCTAACATTATATGT                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD132691             [                                                                                                                                                                                                                                                                                                           AACTACAATACTTCAAATGATGGATAAAATACAATGAAACCATGTA CCCTGACAGG GAAAAACAAAGATTATAGTCCATAAGGAGTAAACATGTTTGAATATTTACTCTATGAGGTGACCATTGCACTTGAGGTGATGCCAGAAGAAGCTTGACGAGAAGACAAACTTGTCCCGGAGATAGCAGCTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGT AAAGCAGGATGAATGCATGGTAGAACT CCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATC ATTTCGAACT CCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGCAGACATGTACACTGATGCAGCGATGGACGTTCGACGAGCATACCG                                                                                                                                                           ]
[+] EMBL CD132867             [                                                                                                                                                                                                                                                                                                           AACTACAATACTTCAAATGATGGATAAAATACAATGAAACCATGTA CCCTGACAGG GAAAAACAAAGATTATAGTCCATAAGGAGTAAACATGTTTGAATATTTACTCTATGAGGTGACCATTGCACTTGAGGTGATGCCAGAAGAAGCTTGACGAGAAGACAAACTTGTCCCGGAGATAGCAGCTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGT AAAGCAGGATGAATGCATGGTAGAACT CCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATC ATTTCGAACT CCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGCAGACATGTACACTGATGCAGCGATGGACGTTCGACGAGCATACCG                                                                                                                                                           ]
[+] EMBL CD133224             [                                                                                                                                                                                                                                                                                                           AACTACAATACTTCAAATGATGGATAAAATACAATGAAACCATGTA CCCTGACAGG GAAAAACAAAGATTATAGTCCATAAGGAGTAAACATGTTTGAATATTTACTCTATGAGGTGACCATTGCACTTGAGGTGATGCCAGAAGAAGCTTGACGAGAAGACAAACTTGTCCCGGAGATAGCAGCTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGT AAAGCAGGATGAATGCATGGTAGAACT CCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATC ATTTCGAACT CCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGCAGACATGTACACTGATGCAGCGATGGACGTTCGACGA                                                                                                                                                                   ]
[+] EMBL CD130014             [                                                                                                                                                                                                                                                                                                           AACTACAATACTTCAAATGATGGATAAAATACAGTGAAACCATGTA CCCTGACAGG GAAAAACAAAGATTATAGTCCATAAGGAGTAAACATGTTTGAATATTTACTCTATGAGGTGACCATTGCACTTGAGGTGATGCCAGAAGAAGCTTGACGAGAAGACAAACTTGTCCCGGAGATAGCAGCTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGT AAAGCAGGATGAATGCATGGTAGAACT CCACCGTGGCTAATATGTACGTGCTTTAAC ATTCGTTTAACTCGGCATC ATTTCGAACT CCTAACATTATATGTCTTGGCGTAATAGTTTTCCTT                                                                                                                                                                                                                                                                         ]
[+] EMBL CD132698             [                                                                                                                                                                                                                                                                                                           AACTACAATACTTCAAATGATGGATAAAATACAATGAAACCATGTA CCCTGACAGG GAAAAACAAAGATTATAGTCCATAAGGAGTAAACATGTTTGAATATTTACTCTATGAGGTGACCATTGCACTTGAGGTGATGCCAGAAGAAGCTTGACGAGAAGACAAACTTGTCCCGGAGATAGCAGCTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGT AAAGCAGGATGAATGCATGGTAGAACT CCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATC ATTTCGAACT CCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATT                                                                                                                                                                                                                                          ]
[+] EMBL CD133011             [                                                                                                                                                                                                                                                                                                           AACTACAATACTTCAAATGATGGATAAAATACAATGAAACCATGTA CCCTGACAGG GAAAAACAAAGATTATAGTCCATAAGGAGTAAACATGTTTGAATATTTACTCTATGAGGTGACCATTGCACTTGAGGTGATGCCAGAAGAAGCTTGACGAGAAGACAAACTTGTCCCGGAGATAGCAGCTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGT AAAGCAGGATGAATGCATGGTAGAACT CCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATC ATTTCGAACT CCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGC                                                                                                                                                                                                        ]
[+] EMBL CD132907             [                                                                                                                                                                                                                                                                                                           AACTACAATACTTCAAATGATGGATAAAATACAATGAAACCATGTA CCCTGACAGG GAAAAACAAAGATTATAGTCCATAAGGAGTAAACATGTTTGAATATTTACTCTATGAGGTGACCATTGCACTTGAGGTGATGCCAGAAGAAGCTTGACGAGAAGACAAACTTGTCCCGGAGATAGCAGCTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGT AAAGCAGGATGAATGCATGGTAGAACT CCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATC ATTTCGAACT CCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGCAGACATGTACACTGATGCAGCGATGGACGTTCGACGAGCATACCGACCTTTTTTCATATAACGGTG AACTCTGCTAACAGAAATCACTAAGCCCGCTCTATTGGATTNTGTGTGTTTCTTGCCACCAGCTGCCTTTCTTGCCTTACCTCTTCCTGACATAATTTCCAATCC GGGTTGACCTCANAAAACAG       ]
[+] EMBL CD189392             [                                                                                                                                                                                                                                                                                                           AACTACAATACTTCAAATGATGGATAAAATACAATGAAACCATGTA CCCTGACAGG GAAAAACAAAGATTATAGTCCATAAGGAGTAAACATGTTTGAATATTTACTCTATGAGGTGACCATTGCACTTGAGGTGATGCCAGAAGAAGCTTGACGAGAAGACAAACTTGTCCCGGAGATAGCAGCTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGT AAAGCAGGATGAATGCATGGTAGAACT CCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATC ATTTCGAACT CCTAACATTATATGTCTTGGCGTAATAGT                                                                                                                                                                                                                                                                                ]
[-] EMBL CD133206             [                                                                                                                                                                                                                                                                                                            ACTACAATACTTCAAATGATGGATAAAATACAATGAAACCATGTA CCCTGACAGG GAAAAACAAAGATTATAGTCCATAAGGAGTAAACATGTTTGAATATTTACTCTATGAGGTGACCATTGCACTTGAGGTGATGCCAGAAGAAGCTTGACGAGAAGACAAACTTGTCCCGGAGATAGCAGCTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGT AAAGCAGGATGAATGCATGGTAGAACT CCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATC ATTTCGAACT CCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAccaggacaa                                                                                                                                                                                                       ]
[-] EMBL CD133233             [                                                                                                                                                                                                                                                                                                            ACT CAATACTTCAAATGATGGATAAAATCCAATGAAACCATGTA CCCTGACAGG GAAAAACAAAGATTATAGTCCATAAGGAGTAAACATGTTTGAATA TTACTCTATGAGGTGACCATTGCACTTGAGGTGATGCCAGAAGAAGCTTGACGAGAAGACAAACTTGTCCCGGAGATAGCAGCTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGT AAAGCAGGATGAATGCATGGTAGAACT CCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATC ATTTCGAACT CCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCCCTAAGTATTCAATAACAGCAGACATGTA                                                                                                                                                                                               ]
[-] EMBL CD132921             [                                                                                                                                                                                                                                                                                                            ACTACAATACTTCAAATGATGGATAAAATACAATGAAACCATGTA CCCTGACAGG GAAAAACAAAGATTATAGTCCATAAGGAGTAAACATGTTTGAATATTTACTCTATGAGGTGACCATTGCACTTGAGGTGATGCCAGAAGAAGCTTGACGAGAAGACAAACTTGTCCCGGAGATAGCAGCTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGT AAAGCAGGATGAATGCATGGTAGAACT CCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATC ATTTCGAACT CCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGCA                                                                                                                                                                                                       ]
[-] EMBL CD083438             [                                                                                                                                                                                                                                                                                                                                     AAATACAATGAAACCATGTA CCCTGACAGG GAAAAACAAAGATTATAGTCCATAAGGAGTAAACATGTTTGAATATTTACTCTATGAGGTGACCATTGCACTTGAGGTGATGCCAGAAGAAGCTTGACGAGAAGACAAACTTGTCCCGGAGATAGCAGCTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGT AAAGCAGGATGAATGCATGGTAGAACT CCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATC ATTTCGAACT CCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGCAGACATGTACACTGATGCAGCGATGGACGTTCGACGAGCATACCGACCTTTTTTCATATAACGGTG AACTCTGCTAACAGAAATCACTAAGCCAGCTCTATTGGATTTTGTGTG TTCTTGCCACCAGCTGCCTTTCTTGCCctcgtgcg                                                 ]
[+] EMBL CD149925             [                                                                                                                                                                                                                                                                                                                                                                  GG GAAAAACAAAGATTATAGTCCATAAGGAGTAAACATGTTTGAATATTTACTCTATGAGGTGACCATTGCACTTGAGGTGATGCCAGAAGAAGCTTGACGAGAAGACAAACTTGTCCCGGAGATAGCAGCTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGT AAAGCAGGATGAATGCATGGTANAACT CCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATC ATTTCGAACT CCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTTCCTTTTGCAGCATTCCCTGACAATTCGTTTACTTCAGCCACTAAGTATTCAATAACAGCAGACATGTACACTGATGCAACGATGGACGTTCGACGAGCATACCGACCTTTTTTCATATAACGGTGAAACTCTGCTAACAGAAATTACTAA                                                                                                             ]
[+] EMBL CD149922             [                                                                                                                                                                                                                                                                                                                                                                  GG GAAAAACAAAGATTATAGTCCATAAGGAGTAAACATGTTTGAATATTTACTCTATGAGGTGACCATTGCACTTGAGGTGATGCCAGAAGAAGCTTGACGAGAAGACAAACTTGTCCCGGAGATAGCAGCTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGT AAAGCAGGATGAATGCATGGTAGAACT CCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATC ATTTCGAACT CCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCGTTTACTTCAGCCACTAAGTATTCAATAACAACAGACATGTACACTGATGCACCGATGGACGTTCAACAAACCTTCCGACCTTTTTTCATATAAACGTGAAACTTTGCTAACAGAAATCACTAAc                                                                                                            ]
[-] EMBL CD180488             [                                                                                                                                                                                                                                                                                                                                                                                                                                          ACTTGAGGTGATGCCAGAAGAAGCTTGACGAGAAGACAAACTTGTCCCGGAGATAGCAGCTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGT AAAGCAGGATGAATGCATGGTAGAACT CCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATC ATTTCGAACT CCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTGCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGCAGACATGTACACTGATGCAGCGATGGACGTTCGACGAGCATACCGACCTTTTTTCATATAACGGTG AACTCTGCTAACAGAAATCACTAAGCCAGCTCTATTGGATTTTGTGTGTTTCTTGCCACCAGCTGCCTTTCTTGCCTTACCTCTT                                                ]
[-] EMBL CD136361             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGAGAATTCGTGAGCACACC TTTCTCTNTAGT AAAGCAGGATGAATGCATGGTAGAACT CCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATC ATTTCGAACT CCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGCAGACATGTACACTGATGCAGCGATGGACGTTCGACGAGCATACCGACCTTTTTTCATATAACGGTG AACTCTGCTAACAGAAATCACTAAGCCAGCTCTATTGGATTTTGTGTGTTT                                                                                  ]
[-] EMBL CD182038             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAATCGTGAGCACACCTTTTCTC TTAGTNAAAGCAGGATGAATGCATGGTAG ACTNCCACCGTGGCTAATATGTACGTGCTTACAAAATTCGTTAANCTCGGCATC ATTTCG ACTCCCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGCAGACATGTACACTGATGCAGCGATGGACGTTCGACGAGCATACCGACCTTTTTTCATATAACGGTG AACTCTGCTAACAGAAATCACTAAGCCAGCTCTATTGGATTTTGTGTGTTTCTTGCCACCAGCTGCCTTTCTTGCCTTACCTCTTCCTGACATAATTTCCAATCCAGGGCAGCCCACAATCGATCCCCGCCCC]
[-] EMBL CD092053             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTGAGCACACCTTTTCTCTTTAGT AAAGCAGGATGAATGCATGGTAGAACT CCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATC ATTTCGAACT CCTAACATTATATGTCTTGGCGCAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGCAGACATGTACACTGATGCAGCGATGGACGTTCGACGAGCATACCGACCTTTTTTCATATAACGGTG AACTCTGCTAACAGAAATCACTAAGCCAGCTCTATTGGATTTTGTGTGTTTCTTGCCACCAGCTGCCTTTCTTGCCTTACCTCTTCCTGACATAATTTCCA                                ]
[-] EMBL CD136419             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTACGTGCTTTAACAATTCGTTTAACTCGGCATC ATTTCGAACT CCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGCAGACATGTACACTGATGCAGCGATGGACGTTCGACGAGCATACCGACCTTTTTTCATATAACGGTG AACTCTGCTAACAGAAATCACTAAGCCAGCTCTATTGGATTTTGTGTGTTT                                                                                  ]
[-] EMBL CD136353             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTACGTGCTTTAACAATTCGTTTAACTCGGCATC ATTTCGAACT CCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGCAGACATGTACACTGATGCAGCGATGGACGTTCGACGAGCATACCGACCTTTTTTCATATAACGGTG AACTCTGCTAACAGAAATCACTAAGCCAGCTCTATTGGATTTTGTGTGTTT                                                                                  ]




>consensus_11084#0
TTATTTTTTTTTTTTTTTTTTTTTTTAGAACTAATAGGCGTTTTATTAAACATGTTGCAA
AAGAAAAACATTGAGAATAGAATATAACAGATATAATTAAAGCATTCAATTAAAAAAGGC
TAGCAACCGTATTAAAAAGATCGCTAACCATTGGCCAAGGAAAAAAGACAACAAATGTGA
AGTACACAAAGTTAGTTGAAACAGATAACTTGAATGGTACAAAAGAGTTTTCCTAATAGA
TATTTTACTTTCGTAAAGAAAACAATCCTAAGTATGAGTATTTATCCTGGTAGTAGAATA
ACTACAATACTTCAAATGATGGATAAAATACAATGAAACCATGTACCCTGACAGGGAAAA
ACAAAGATTATAGTCCATAAGGAGTAAACATGTTTGAATATTTACTCTATGAGGTGACCA
TTGCACTTGAGGTGATGCCAGAAGAAGCTTGACGAGAAGACAAACTTGTCCCGGAGATAG
CAGCTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGTAAAGCAGGAT
GAATGCATGGTAGAACTCCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACT
CGGCATCATTTCGAACTCCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCG
CTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGCAG
ACATGTACACTGATGCAGCGATGGACGTTCGACGAGCATACCGACCTTTTTTCATATAAC
GGTGAACTCTGCTAACAGAAATCACTAAGCCAGCTCTATTGGATTTTGTGTGTTTCTTGC
CACCAGCTGCCTTTCTTGCCTTACCTCTTCCTGACATAATTTCCAATCCGGGTTGACCTC
ANAAAACAGCCGCCCC

consensusID : consensus_11084#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 582
fasta sequence

                              [GCTACTATACTTCAAATGATGGATAGGAAGCCATGAAACCATGTCCCTCTATGAGGTGCCCACTGCACTCGAGGTGATGCCAGAAGAAGCTTGTCGAAACGACAAACTTGTCCCGATGATAGCAGCTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGTAAAGCAGGATGAATGCATGGTAGAACTCCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATCATTTCGAACTCCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGCAGACATGTACACTGATGCAGCGATGGACGTTCGACGAGCATACCGACCTTTTTTCATATAACGGTGAACTCTGCTAACAGAAATCACTAAGCCAGCTCTATTGGATTTTGTGTGTTTCTTG-CCACCAGC-TGCCTTT-CTTGCCTTACCTCTTCCTGACATAATTTCCAATCCGGGTTGACCTCAAAAAACAGAGACCTAGAGCGCGGTGTACCTAAAAGCCAG]

[-] EMBL CD133539             [GCTACTATACTTCAAATGATGGATAGGAAGCCATGAAACCATGTCCCTCTATGAGGTGCCCACTGCACTCGAGGTGATGCCAGAAGAAGCTTGTCGAAACGACAAACTTGTCCCGATGATAGCAGCTCCGCCTGGTCGTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGTAAAGCAGGATGAATGCATGGTAGAACTCCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATCATTTCGCACTCCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGCAGACATGTACACTGATGCAGCGATGGACGTTCGACGAGCATACCGACCTTTTTTCATATAACGGTGAACTCTGCTAACAGAAATCACCAAGCCAGCTCTATTGGATTTTGTGTGTTTCTTGTCCACCAGCGTGCCTTTGCTTGCCTTACCTCTTCCTGACATAATTTCCAATCCGGGTTGACCTCAAAAA                                   ]
[-] EMBL CD133027             [                                                                                                                              TCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGTAAAGCAGGATGAATGCATGGTAGAACTCCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATCATTTCGAACTCCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGCAGACATGTACACTGATGCAGCGATGGACGTTCGACGAGCATACCGACCTTTTTTCATATAACGGTGAACTCTGCTAACAGAAATCACTAAGCCAGCTCTATTGGATTTTGTGTGTTTCTTG CCACCAGC TGCCTTT CTTGCCTTACCTCTTCCTGACATAATTTCCAATCCGGGTTGACCTCAAAAAACAGAGACCTAGAGCGCGGTGTACCTAAAAGCCAG]
[-] EMBL CD133514             [                                                                                                                              TCCACCTTGTCCTGGAGAACTCGTGAGCACACCTTTTCTCTTTAGTAAAGCAGGATGAATGCATGGTAGAACTCCNCCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATCATTTCGAACTCCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGCAGACATGTACACTGATGCAGCGATGGACGTTCGACGAGCATACCGACCTTTTTTCATATAACGGTGAACTCTGCTAACAGAAATCACTAAGCCAGCTCTATTGGATTTTGTGTGTTTCTTG CCACCAAC TGCCTTT CTTGCCTTACCTCTTCCTGACATAATTTCCAATCCGGGTTGACCTCAAAAAACAGAGACCTAGAGCGCGGTGTACCTAAA      ]
[-] EMBL CD133484             [                                                                                                                              TCCACCTTGTCCTGGAGAATTCGTGAGCACACCTGTTCTCTTTAGTAAAGCAGGATGAATGCATGGTAGAACTCCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATCATTTCGAACTCCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGCAGACATGTACACTGATGCAGCGATGGACGTTCGACGAGCACACCGACCTTTTTTCATATAACGGTGAACTCTGCTAACAGAAATCACTAAGCCAGCTCTATTGGATTTTGTGTGTTTCTTG CCACCAGC TGCCTTT CTTGCCTTACCTCTTCCTGACATAATTTCCAATCCGGGTTGACCTCAAAAAACA                                ]
[+] EMBL CD189709             [                                                                                                                                                      GAGCACACCTTTTCTCTTTAGTAAAGCAGGATGAATGCATGGTAGAACTCCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATCATTTCGAACTCCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAGTAACAGCAGACATGTACACTGATGCAGCGATGGACGTTCGACGAGCATACCGACCTTTTTTCATATAACGGTGAACTCTGCTAACAGAAATCACTAAGCCAGCTCTATTGGATTTTGTGTGTTTCTTG CCACCAGC TGCCTTT CTTGCCTTACCTCTTCCTGACATAATTTCCAATCCGGGTTGACCTCAAAAAACAGAGACCTAGg                      ]
[+] EMBL CD133375             [                                                                                                                                                      GAGCACACCTTTTCTCTTTAGTAAAGCAGGATGAATGCATGGTAGAACTCCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATCATTTCGAACTCCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGCAGACATGTACACTGATGCAGCGATGGACGTTCGACGAGCATACCGACCTTTTTTCATATAACGGTGAACTCTGCTAACAGAAATCACTAAGCCAGCTCTATTGGATTTTGTGTGTTTCTTG CCACCAGC TGCCTTT CTTGCCTTACCTCTTCCTGACATAATTTCCAATCCGGGTTGACCTTAAAAAACAGAG                             ]




>consensus_11084#1
GCTACTATACTTCAAATGATGGATAGGAAGCCATGAAACCATGTCCCTCTATGAGGTGCC
CACTGCACTCGAGGTGATGCCAGAAGAAGCTTGTCGAAACGACAAACTTGTCCCGATGAT
AGCAGCTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGTAAAGCAGG
ATGAATGCATGGTAGAACTCCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAA
CTCGGCATCATTTCGAACTCCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTT
CGCTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGC
AGACATGTACACTGATGCAGCGATGGACGTTCGACGAGCATACCGACCTTTTTTCATATA
ACGGTGAACTCTGCTAACAGAAATCACTAAGCCAGCTCTATTGGATTTTGTGTGTTTCTT
GCCACCAGCTGCCTTTCTTGCCTTACCTCTTCCTGACATAATTTCCAATCCGGGTTGACC
TCAAAAAACAGAGACCTAGAGCGCGGTGTACCTAAAAGCCAG

consensusID : consensus_11084#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 402
fasta sequence

                              [CTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGTAAAGCAGGATGAATGCATGGTAGAACTCCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATCATTTCGAACTCCTAACATTATATGTCTTGGCGTAATAGTTTTCCTGAAATGATAGATGTATTATTAAATGAATAAGTTTTTCAAGAATTTCACAAATCATATCATTTAAATCTGTTGTCAAAAACTCAGAAATATTGTGATTCCACCCCATGTAAATGTTCTACGAACAGTAAATTAACATCTCGCAATTTTATAAAAGAAACATACAGTTCGACAATTTTGTAATTGACTAATTGCTATCTAAAAGAATTAGTTTTACATTATATATAAAGAGATTC]

[+] EMBL CD189103             [CTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGTAAAGCAGGATGAATGCATGGTAGAACTCCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATCATTTCGAACTCCTAACATTATATGTCTTGGCGTAATAGTTTTCCTGAAATGATAGATGTATTATTAAATGAATAAGTTTTTCAAGAATTTCACAAATCATATCATTTAAATCTGTTGTCAAAAACTCAGAAATATTGTGATTCCACCCCATGTAAATGTTCTACGAACAGTAAATTAACATCTCGCAATTTTATAAAAGAAACATACAGTTCGACAATTTTGTAATTGACTAATTGCTATCTAAAAGAATTAGTTTTACATTATATATAAAGAGATTC]




>consensus_11084#2
CTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGTAAAGCAGGATGAA
TGCATGGTAGAACTCCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGG
CATCATTTCGAACTCCTAACATTATATGTCTTGGCGTAATAGTTTTCCTGAAATGATAGA
TGTATTATTAAATGAATAAGTTTTTCAAGAATTTCACAAATCATATCATTTAAATCTGTT
GTCAAAAACTCAGAAATATTGTGATTCCACCCCATGTAAATGTTCTACGAACAGTAAATT
AACATCTCGCAATTTTATAAAAGAAACATACAGTTCGACAATTTTGTAATTGACTAATTG
CTATCTAAAAGAATTAGTTTTACATTATATATAAAGAGATTC

consensusID : consensus_11084#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 331
fasta sequence

                              [GAGCACACCTTTTCTCTTTAGTAAAGCAGGATGAATGCATGGTAGAACTCCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATCATTTCGAACTCCTAACATTATATGTCTTGGCGTAATAGTTTTCCTGAAATGATAGATGTATTATTAAATGAATAAGTTTTTCAAGAATCTCACAAATCACATCATTTAAATCTGTTGTCAAAAACTCAGAAATATTGTGATTCCACCCCATGTAAATGTTAGTTCGACAATTTTGTAATTGACTAATTGCTATCTAAAAGAATTAGTTTTACATTATATATAAAGAGATTCA]

[+] EMBL CD190088             [GAGCACACCTTTTCTCTTTAGTAAAGCAGGATGAATGCATGGTAGAACTCCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATCATTTCGAACTCCTAACATTATATGTCTTGGCGTAATAGTTTTCCTGAAATGATAGATGTATTATTAAATGAATAAGTTTTTCAAGAATCTCACAAATCACATCATTTAAATCTGTTGTCAAAAACTCAGAAATATTGTGATTCCACCCCATGTAAATGTTAGTTCGACAATTTTGTAATTGACTAATTGCTATCTAAAAGAATTAGTTTTACATTATATATAAAGAGATTC ]
[-] EMBL CD183311             [ AGCACACCTTTTCTCTTTAGTAAAGCAGGATGAATGCATGGTAGAACTCCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATCATTTCGAACTCCTAACATTATATGTCTTGGCATAATAGTTTTCCTGAAATGATAGATGTATTATTAAATGAATAAGTTTTTCAAGAATCTCACAAATCACATCATTTAAATCTGTTGTCAAAAACTCAGAAATATTGTGATTCCACCCCATGTAAATGTTAGTTCGACAATTTTGTAATTGACTAATTGCTATCTAAAAGAATTAGTTTTACATTATATATAAAGAGATTCA]




>consensus_11084#3
GAGCACACCTTTTCTCTTTAGTAAAGCAGGATGAATGCATGGTAGAACTCCACCGTGGCT
AATATGTACGTGCTTTAACAATTCGTTTAACTCGGCATCATTTCGAACTCCTAACATTAT
ATGTCTTGGCGTAATAGTTTTCCTGAAATGATAGATGTATTATTAAATGAATAAGTTTTT
CAAGAATCTCACAAATCACATCATTTAAATCTGTTGTCAAAAACTCAGAAATATTGTGAT
TCCACCCCATGTAAATGTTAGTTCGACAATTTTGTAATTGACTAATTGCTATCTAAAAGA
ATTAGTTTTACATTATATATAAAGAGATTCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11084#2      ------------------------------------------------------------
consensus_11084#3      ------------------------------------------------------------
consensus_11084#0      TTATTTTTTTTTTTTTTTTTTTTTTTAGAACTAATAGGCGTTTTATTAAACATGTTGCAA 60
consensus_11084#1      ------------------------------------------------------------
                                                                                   

consensus_11084#2      ------------------------------------------------------------
consensus_11084#3      ------------------------------------------------------------
consensus_11084#0      AAGAAAAACATTGAGAATAGAATATAACAGATATAATTAAAGCATTCAATTAAAAAAGGC 120
consensus_11084#1      ------------------------------------------------------------
                                                                                   

consensus_11084#2      ------------------------------------------------------------
consensus_11084#3      ------------------------------------------------------------
consensus_11084#0      TAGCAACCGTATTAAAAAGATCGCTAACCATTGGCCAAGGAAAAAAGACAACAAATGTGA 180
consensus_11084#1      ------------------------------------------------------------
                                                                                   

consensus_11084#2      ------------------------------------------------------------
consensus_11084#3      ------------------------------------------------------------
consensus_11084#0      AGTACACAAAGTTAGTTGAAACAGATAACTTGAATGGTACAAAAGAGTTTTCCTAATAGA 240
consensus_11084#1      ------------------------------------------------------------
                                                                                   

consensus_11084#2      ------------------------------------------------------------
consensus_11084#3      ------------------------------------------------------------
consensus_11084#0      TATTTTACTTTCGTAAAGAAAACAATCCTAAGTATGAGTATTTATCCTGGTAGTAGAATA 300
consensus_11084#1      ------------------------------------------------------------
                                                                                   

consensus_11084#2      ------------------------------------------------------------
consensus_11084#3      ------------------------------------------------------------
consensus_11084#0      ACTACAATACTTCAAATGATGGATAAAATACAATGAAACCATGTACCCTGACAGGGAAAA 360
consensus_11084#1      ---------------------------------------------------------GCT 3
                                                                                   

consensus_11084#2      ------------------------------------------------------------
consensus_11084#3      ------------------------------------------------------------
consensus_11084#0      ACAAAGATTATAGTCCATAAGGAGTAAACATGTTTGAATATTTACTCTATGAGGTGACCA 420
consensus_11084#1      ACTATACTTCAAATGATGGATAGGAAGCCATGAAACCATGTCC-CTCTATGAGGTGCCCA 62
                                                                                   

consensus_11084#2      ------------------------------------------------------------
consensus_11084#3      ------------------------------------------------------------
consensus_11084#0      TTGCACTTGAGGTGATGCCAGAAGAAGCTTGACGAGAAGACAAACTTGTCCCGGAGATAG 480
consensus_11084#1      CTGCACTCGAGGTGATGCCAGAAGAAGCTTGTCGAAACGACAAACTTGTCCCGATGATAG 122
                                                                                   

consensus_11084#2      ---CTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGTAAAGCAGGAT 57
consensus_11084#3      ----------------------------GAGCACACCTTTTCTCTTTAGTAAAGCAGGAT 32
consensus_11084#0      CAGCTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGTAAAGCAGGAT 540
consensus_11084#1      CAGCTCCACCTTGTCCTGGAGAATTCGTGAGCACACCTTTTCTCTTTAGTAAAGCAGGAT 182
                                                   ********************************

consensus_11084#2      GAATGCATGGTAGAACTCCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACT 117
consensus_11084#3      GAATGCATGGTAGAACTCCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACT 92
consensus_11084#0      GAATGCATGGTAGAACTCCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACT 600
consensus_11084#1      GAATGCATGGTAGAACTCCACCGTGGCTAATATGTACGTGCTTTAACAATTCGTTTAACT 242
                       ************************************************************

consensus_11084#2      CGGCATCATTTCGAACTCCTAACATTATATGTCTTGGCGTAATAGTTTTCCTGAAATGA- 176
consensus_11084#3      CGGCATCATTTCGAACTCCTAACATTATATGTCTTGGCGTAATAGTTTTCCTGAAATGA- 151
consensus_11084#0      CGGCATCATTTCGAACTCCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCG 660
consensus_11084#1      CGGCATCATTTCGAACTCCTAACATTATATGTCTTGGCGTAATAGTTTTCCTTTTGTTCG 302
                       ****************************************************    *   

consensus_11084#2      ---TAGATGTATTATTAAATGAATAAGTTTTTC--------AAGAATTTCACAA-----A 220
consensus_11084#3      ---TAGATGTATTATTAAATGAATAAGTTTTTC--------AAGAATCTCACAA-----A 195
consensus_11084#0      CTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGCAG 720
consensus_11084#1      CTTTTGCAGCATTCCCTGACAATTCATTTACTTCAGCCACTAAGTATTCAATAACAGCAG 362
                          * *  * ***     *  * * * **  *         *** **   * **      

consensus_11084#2      TCATATCATTTAAATCTGTTGTCAAAAACTCAGAAATATTGTGATTCCACCCCATGTAAA 280
consensus_11084#3      TCACATCATTTAAATCTGTTGTCAAAAACTCAGAAATATTGTGATTCCACCCCATGTAAA 255
consensus_11084#0      ACATGTACACTGATGCAGCGATGGACGTTCGACGAGCATACCGACCTTTTTTCATATAAC 780
consensus_11084#1      ACATGTACACTGATGCAGCGATGGACGTTCGACGAGCATACCGACCTTTTTTCATATAAC 422
                        **  *    * *  * *   *  *      *  *  **   **        *** *** 

consensus_11084#2      TGT----TCTACGAACAGTAAATTAACATCTCGCAATTTTATAAAAGAAACATACAGTTC 336
consensus_11084#3      TGT----T-----------------------------------------------AGTTC 264
consensus_11084#0      GGTGAACTCTGCTAACAGAAATCACTAAGCCAGCTCTATTGGATTTTGTGTGTTTCTTGC 840
consensus_11084#1      GGTGAACTCTGCTAACAGAAATCACTAAGCCAGCTCTATTGGATTTTGTGTGTTTCTTGC 482
                        **    *                                                 * *

consensus_11084#2      GACAATTT--TGTAATTGACTAATTGCTATCTAAAAGAATT---AGTTTTACATTATATA 391
consensus_11084#3      GACAATTT--TGTAATTGACTAATTGCTATCTAAAAGAATT---AGTTTTACATTATATA 319
consensus_11084#0      CACCAGCTGCCTTTCTTGCCTTACCTCTTCCTGACATAATTTCCAATCCGGGTTGACCTC 900
consensus_11084#1      CACCAGCTGCCTTTCTTGCCTTACCTCTTCCTGACATAATTTCCAATCCGGGTTGACCTC 542
                        ** *  *    *  *** ** *   **  ** * * ****   * *      * *  * 

consensus_11084#2      TAAAGAGATTC----------------------------- 402
consensus_11084#3      TAAAGAGATTCA---------------------------- 331
consensus_11084#0      ANAAAACAGCCGCCCC------------------------ 916
consensus_11084#1      AAAAAACAGAGACCTAGAGCGCGGTGTACCTAAAAGCCAG 582
                         ** * *