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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11085#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 31 consensus length = 1968 fasta sequence
[CATCGAGCTTTAGTCACTAATGATAATCATGCTTCCAGTACTTCGTCTCATCCTAATCATCAGCTAACACATGTAATGTCCTCAACACTGACTCCAGCCACAACAACTAATATACCAACTAAAGGTATAATAGTTCCTATTGCGTCTACTAATCCTAGTCCATTGTTAGTCCCATGTACGGGTGGTGCTTC-AGATCCATCCTCAGTAAAACAATTTCCATTAGATAATCCAACTAACAATGTTTCTAATGGTGATTGGCGTTCAGCCACATCTTCTTCCAGCTTTGTTTCTGCTCAAGGGCATGCAAATCGTGACGATCAAGAAGTGAAATCAAATGGTATTTGTGATGTTAGTCAAAGGACTTCCGATGGCACCTGGTCTTCGTCCAAAAATGGTGTTCATCGGTGCCGGATGTCTGGTTCAGTGCCGTCCACATCCTCTGCCTTGCCGACAACTACTGATTCTTCATCATCTTCCACTTCGAGCGGTAAGATGAAACAAACTGCTGGACATAACGCAGATGTCGGTAGCAGCAGCACAACCACAAGTAGCACAACTATTAGTCAAAGTAGCTCTCTTGTCAACACTGTATCTACTCCTTTAATTACTTCGAAAGAGGAATCTGAAGATACCGAAGAGTCTGTTGAAGCGGAAACCTCTGGTACTTCTAGTCGTGTACGGCGAAGTACACGTAGAAGAAACACTACTTCAACTACCACAACTTCGAATCGTCCACGCAACCGGACTAGTCGGGATTCATCACTTCTGGCTACTGTTTCAAAGGCTGCTTCAACCACTTCATCTCATTCTAATCTCGTCGCAACCCCATCGAGCTCTACCGCATGCTCGTTGGGTACAACAAATCAGACTGTAAAGTGTTCTAGCATGGGTACCAGTAATGATAGTAGTTCAACGGTAAATGGAGCTTCAAGTTCTAATGTTGTACTTCGCCAATTCGAAGCACACACTGCTATTCTAGCCGCTCGAAGCCCAGTTTTTGCTGCGATGTTTGGACATGGCATGGAGGAGTCCAGAGCGAATAGGGTGGAAATCACGGACATGGAGCCAGATACCGTTGCAGAAGTTTTGCGTTACATATATACGGGACAAGTTGTTGGTATGAATCGACTCGCTCACGAGCTATTGGCCGCGGCTGACAAGTACCAGTTGGAACGATTAAAGACAATGTGTGAAGAGGCTCTTGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATA-TGCATAACGCAGAACAATTGAAAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTGTGCGAAACTGAAGG-CTATGAACAGCTAGTTCGACATCGTCCACGTCTACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGTTGGGCCCGTAAACGTCCAAGGCAATCATAAATTAAGAAAAAAAACATTTCTAAAAGACC-TATCAATAATATCTCCTGTGTATTAAAATTTCCCTTTACCTAAAATCCGTATTCTTCATAATTTTCCTTTTCTACATATCTTTCCTCTGTTTTCAAATCATTTATCTTGCGTAAAAGAAATACGAAAAAATAGGCACCTATTGATCATTTTTGTGTGCTTTTCAATATTTTACTGACACCACATAACAATCTAAAGCATCTCTTGTTCTTCGTTTCCTAATTAAAATTATTTTGGTTC-AAAAAAACCCATTCAAGTTATAGTTTTCAGTCGAATATCTAGTCGCCGATTAGTTTAAACTTGTTACCTTCCCCTAACTTATACTTTTTGTTTAATCTTTTAACATTGTGTGTGTGTGTGTTGTTTGATTATTGTTCAGAGTAG-TCACAATTTCTTGCTTT-CTAAATTTCCAGCGTTGAACACTTCACCTTTTTTTTCTCTGCTATAGTCACAGCGCTTGTTTCACATTGATCTCATCCGTTTATAAACATT]
[+] EMBL CD193710 [CATCGAGCTTTAGTCACTAATGATAATCATGCTTCCAGTACTTCGTCTCATCCTAATCATCAGCTAACACATGTAATGTCCTCAA ]
[+] EMBL CD193720 [CATCGAGCTTTAGTCACTAATGATAATCATGCTTCCAGTACTTCGTCTCATCCTAATCATCAGCTAACACATGTAATGTCCTCAACACTGACTCCAGCCACtatcggttc ]
[-] EMBL CD193750 [ ATCGAGCTTTAGTCACTAATGATAATCATGCTTCCAGTACTTCGTCTCATCCTAATCATCAGCTAACACATGTAATGTCCTCAACACTGAC ]
[-] EMBL CD193642 [ ATCGAGCTTTAGTCACTAATGATAATCATGCTTCCAGTACTTCGTCTCATCCTAATCATCAGCTAACACATGTAATGTCCTCAACACTGACTCCAGCCACAACAACTAATATACCAACTAAAGGTATAATAGTTCCTATTGCGTCTACTAATCCTAGTCCATTGTTAGTCCCATGTACGGGTGGTGCTTC AGATCCATCCTCAGTAAAACAATTTCCATTAGATAATCCAACTAACAATGTTTCTAATGGTGATTGGCG ]
[+] EMBL CD184088 [ TGCTTCCAGTACTTCGTCTCATCCTAATCATCAGCTAACACATGTAATGTCCTCAACACTGACTCCAGCCGCAACAACTAATATACCAACTAAAGGTATAATAGTTCCTATTGCGTCTACTAATCCTAGTCCATTGTTAGTCCCATGTACGGGTGGTGCTTC AGATCCATCCTCAGTAAAACAATTTCCATTAGATAATCCAACTAACAATGTTTCTAATGGTGATTGGCGTTCAGCCACATCTTCTTCCAGCTTTGTTTCTGCTCAAGGGCATGCAAATCGTGACGATCAAGAAGTGAAATCAAATGGT ]
[+] EMBL CD184041 [ TGCTTCCAGTACTTCGTCTCATCCTAATCATCAGCTAACACATGTAATGTCCTCAACACTGACTCCAGCCACAACAACTAATATACCAACTAAAGGTATAATAGTTCCTATTGCGTCTACTAATCCTAGTCCATTGTTAGTCCCATGTACGGGTGGTGCTTC AGATCCATCCTCAGTAAAACAATTTCCATTAGATAATCCAACTAACAATGTTTCTAATGGTGATTGGCGTTCAGCCACATCTTCTTCCAGCTTTGTTTCTGCTCAAGGGCATGCAAATCGTGACGATCAAGAAGTGAAATCAAATGGT ]
[+] EMBL CD184012 [ TGCTTCCAGTACTTCGTCTCATCCTAATCATCAGCTAACACATGTAATGTCCTCAACACTGACTCCAGCCGCAACAACTAATATACCAACTAAAGGTATAATAGTTCCTATTGCGTCTACTAATCCTAGTCCATTGTTAGTCCCATGTACGGGTGGTGCTTC AGATCCATCCTCAGTAAAACAATTTCCATTAGATAATCCAACTAACAATGTTTCTAATGGTGATTGGCGTTCAGCCACATCTTCTTCCAGCTTTGTTTCTGCTCAAGGGCATGCAAATCGTGACGATCAAGAAGTGAAATCAAATGGT ]
[+] EMBL CD183965 [ TGCTTCCAGTACTTCGTCTCATCCTAATCATCAGCTAACACATGTAATGTCCTCAACACTGACTCCAGCCACAACAACTAATATACCAACTAAAGGTATAATAGTTCCTATTGCGTCTACTAATCCTAGTCCATTGTTAGTCCCATGTACGGGTGGTGCTTC AGATCCATCCTCAGTAAAACAATTTCCATTAGATAATCCAACTAACAATGTTTCTAATGGTGATTGGCGTTCAGCCACATCTTCTTCCAGCTTTGTTTCTGCTCAAGGGCATGCAAATCGTGACGATCAAGAAGTGAAATCAAATGGT ]
[+] EMBL AI977694 [ AACACTGACTCCAGCCACAACAACTAATATACCAACTAAAGGGATAATAATTCCTATTGCGTCTACTAATCCTAATCCATTGTTAGTCCCATGTACGGGTGGTGCTTC AGATCCATCCTCAGTAAAACAATTTCCATTAGATAATCCAACTAACAATGTTTCTAATGGTGATTGGCGTTCAGCCACATCTTCTTCCAGCTTTGTTTCTGCTCAAGGGCATGCAAATCGTGACGATCAAGAAGTGAAATCAAATGGTATTTGTGATGTTAGTCAAAGGACTTCCGATGGCACCTGGTCTTCGTCCAAAAATGGTGTTCATCGGTGCCGGATGTCTGGTTCAGTGCCGTCCACATCCTCTGCCTTGCCGACAACTACTGATTCTTCATCATCTTCCACTTCGAGCGGTAAGATGAAACAAACTGCTGGACATAACGCAGATGTCGGTAGCAGCAGCACAACCACAAGTAGCACAACTATTAGTCAAAGTAGCTCTCTTGTCAACACTGTATCTACTCCTTTAATTACTTCGAAAGAGG ]
[-] EMBL CD161039 [ CGGG GG GGTTCAAGATCCATCCTCAGTAAAACAATTTCCATTAGATAATCCAACTAACAATGTTTCTAATGGTGATTGGCGTTCAGCCACATCTTCTTCCAGCTTTGTTTCTGCTCAAGGGCATACAAATCGTGACGATCAAGAAGTGAAATCAAATGGTATTTGTGATGTTAGTCAAAGGACTTCCGATGGCACCTGGTCTTCGTCCAAAAATGGTGTTCATCGGTGCCGGATGTCTGGTTCAGTGCCGTCCACATCCTCTGCCTTGCCGACAACTACTGATTCTTCATCATCTTCCACTTCGAGCGGTAAGATGAAACAAACTGCTGGACATAACGCAGATGTCGGTAGCAGCAGCACAACCACAAGTAGCACAACTATTAGTCAAAGTAGCTCTCTTGTCAACACTGTATCTACTCCTTTAATTACTTCGAAAGAGGAATCTGAAGATACCGAAGAGTCTGTTGAAGCGGAAACCTCTGGTACTTCTAGTCGTGTACGGCGAAGTACACGTAGAAGAAACACTACTTCAACTACCACAACTTCGAA ]
[-] EMBL CD160626 [ GGTAAGATGAAACAAACTGCTGGACATAACGCAGATGTCGGTAGCAGCAGCACAACCACAAGTAGCACAACTATTAGTCAAAGTAGCTCTCTTGTCAACACTGTATCTACTCCTTTAATTACTTCGAAAGAGGAATCTGAAGATACCGAAGAGTCTGTTGAAGCGGAAACCTCTGGTACTTCTAGTCGTGTACGGCGAAGTACACGTAGAAGAAACACTACTTCAACTACCACAACTTCGAATCGTCCACGCAACCGGACTAGTCGGGATTCATCACTTCTGGCTACTGTTTCAAAGGCTGCTTCAACCACTTCATCTCATTCTAATCTCGTCGCAACCCCATCGAGCTCTACCGCATGCTCGTTGGGTACAACAAATCAGACTGTA ]
[+] EMBL CD184405 [ GGGATTCATCACTTCTGGCTACTGTTTCAAAGGCTGCTTCAACCACTTCATCTCATTCTAATCTCGTCGCAACCCCATCGAGCTCTACCGCATGCTCGTTGGGTACAACAAATCAGACTGTAAAGTGTTCTAGCATGGGTACCAGTAATGATAGTAGTTCAACGGTAAATGGAGCTTCAAGTTCTAATGTTGTACTTCGCCAATTCGAAGCACACACTGCTATTCTAGCCGCTCGAAGCCCAGTTTTTGCTGC ]
[-] EMBL CD128002 [ ACACAAAGCTATTCTAGCCGCTCGAAGCCCAGTTTTTGCTGCGATGTTTGGACATGGCATGGAGGAGTCCAGAGCGAATAGGGTGGAAATCACGGACATGGAGCCAGATACCGTTGCAGAAGTTTTGCGTTACATATATACGGGACAAGTTGTTGGTATGAATCGACTCGCTCACGAGCTATTGGCCGCGGCTGACAAGTACCAGTTGGAACGATTAAAGACAATGTGTGAAGAGGCTCTTGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATA TGCATAACGCAGAACAATTGAGAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTGTGCGAAACTGAAGG CTATGAACAGCTAGTTCGACATCGTCCACGTCTACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGTTGGGCCCGTAAACGTCGAAGGCAATCATAAATTAAGAAAAAAAACAT ]
[+] EMBL CD135490 [ GAGTCCAGAGCGAATAGGGTGGAAATCACGGACATGGAGCCAGATACCGTTGCAGAAGTTTTGCGTTACATATATACGGGACAAGTTGTTGGTATGAATCGACTCGCTCACGAGCTATTGGCCGCGGCTGACAAGTACCAGTTGGAACGATTAAAGACAATGTGTGAAGAGGCTCTTGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATA TGCATAACGCAGAACAATTGAAAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTGTGCGAAACTGAAGG CTATGAACAGCTAGTTCGACATCGTCCACGTCTACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGTT ]
[-] EMBL CD135568 [ AGTCCAGAGCGAATAGGGTGGAAATCACGGACATGGAGCCAGATACCGTCGCAGAACTTTTGCGTAACATATATACGGCACAAGTTGCTGGTATGAATCGACTCGCTCACGAGCTATTGGCCGCGGCTGACAAGTACCAGTTGGAACGATTAAAGACAATGTGTGAAGAGGCTCTTGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGATGATAGTGCATAACGCAGAACAATTGAAAGCACATACGTTAGAATTCATAATGCTCCATGCTCATGATGTGTGCGAAATTGAAGGACTATGAACAGCTAGTTCGACATCGACCACGTATACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACCCCCTCTTCGATGTTG ]
[+] EMBL CD070125 [ GAATAGGGTGGAAATCACGGACATGGAGCCAGATACCGTTGCAGAAGTTTTGCGTTACATATATACGGGACAAGTTGTTGGTATGAATCGACTCGCTCACGAGCTATTGGCCGCGGCTGACAAGTACCAGTTGGAACGATTAAAGACAATGTGTGAAGAGGCTCTTGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATA TGCATAACGCAGAACAATTGAAAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTGTGCGANACTGAAGG CTATGAACAGCTAGTTCGACATCGTCCACGTCTACTANATGAGTGCTTTCGAAG ]
[+] EMBL CD198794 [ GAATAGGGTGGAAATCACGGACATGGAGCCAGATACCGTTGCAGAAGTTTTGCGTTACATATATACGGGACAAGTTGTTGGTATGAATCGACTCGCTCACGAGCTATTGGCCGCGGCTGACAAGTACCAGTTGGAACGATTAAAGACAATGTGTGAAGAGGCTCTTGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATA TGCATAACGCAGAACAATTGANAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTGTGCGANACTGAAGG CTATGAACAGCTAGTTCGACATCGTCCACGTCTACTANATGAGTGCTTTCGAAGTTTA ]
[+] EMBL CD167900 [ AGATACCGTTGCAGAAGTTTTGCGTTACATATATACGGGACAAGTTGTTGGTATGAATCGACTCGCTCACGAGCTATTGGCCGCGGCTGACAAGTACCAGTTGGAACGATTAAAGACAATGTGTGAAGAGGCTCTTGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATA TGCATAACGCAGAACAATTGAAAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTGAGCGAAACTGAAGG CTATGAACAGCTAGTTCGACATCGTCCACGTCTACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGTTGGGCCCGTAAACGTCCAAGGCAATCATAAATTAAGAAAAAAAACATTTCTAAAAGACC TATCAATAATATCTCCTGTGTATTAAAATTTCCCTTTACCTAAAATCCGTATTC ]
[-] EMBL CD129548 [ AGATACCGTTGCAGAAGTTTTGCGTTACATATATACGGGACAAGTTGTTGGTATGAATCGACTCGCTCACGAGCTATTGGCCGCGGCTGACAAGTACCAGTTGGAACGATTAAAGACAATGTGTGAAGAGGCTCTTGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATA TGCATAACGCAGAACAATTGAAAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTGTGCGAAACTGAAGG CTATGAACAGCTAGTTCGACATCGTCCACGTCTACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGTTGGGCCCGTAAACGTCCAAGGCAATCATAAATTAAGAAAAAAAACATTTCTAAAAGACC TATCAAT ]
[-] EMBL CD129416 [ GATACCGTTGCAGAAGTTTTGCGTTACATATATACGGGACAAGTTGTTGGTATGAATCGACTCGCTCACGGGCTATTGGCCGCGGCTGACAAGTACCAGTTGGAACGATTAAAGACAATGTGTGAAGAGGCTCTTGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATA TGCATAACGCAGAACAATTGAAAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTGTGCGAAACTGAAGG CTATGAACAGCTAGTTCGACATCGTCCACGTCTACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGTTGGGCCCGT ]
[-] EMBL CD129342 [ GATACCGTTGCAGAAGTTTTGCGTTACATATATACGGGACAAGTTGTTGGTATGAATCGACTCGCTCACGAGCTATTGGCCGCGGCTGACAAGTACCAGTTGGAACGATTAAAGACAATGTGTGAAGAGGCTCTTGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATA TGCATAACGCAGAACAATTGAAAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTGTGCGAAACTGAAGG CTATGAACAGCTAGTTCGACATCGTCCACGTCTACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGTTGGGCCCGTAAACGTCCAAGGCAATCATAAATTAAGAAAAAAAACATTTCTAAAAGACCNTATCAATA ]
[-] EMBL CD120671 [ AGTTGGAACGATTAAAGACAATGTGTGAAGAGGCTCTTGTGGAAAGTCCTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATA TGCATAACGCAGAACAATTGAAAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTGTGCGAAACTGAAGG CTATGAACAGCTAGTTCGACATCGTCCACGTCTACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGCCAGGCC ]
[-] EMBL CD141610 [ acGACAATGTGTGACGACGCTCTAGTGCAGAGTCTTTACGTAGAGAATGCATGTGACATATTTCGTCTAGCTGATA TGCATCACGCAGAACAATCGAAAGCACATACGTTAGAATGTATAATGCTCCATGCACATGATGTGTGCGAAACTGAAGG CTATGAACAGCTAGTTCGTCATCGTCCACGTCTACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGTTGGGCCCGTAAACGTTCAAGGCAATCATAAATTAAGAAAAAAATCATTTCTAAAAGACC TATCAATAATATCTCCTGTGTATTAAAATTTCCCTTTACCTAAAATCCGTATTCTTCATAATTTTCCTCTTCTA ]
[-] EMBL CD198735 [ TGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATA TGCATAACGCAGAACAATTGAAAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTGTGCGAAACTGAAGG CTATGAACAGCTAGTTCGACATCGTCCACGTCTACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGTTGGGCCCGTAAACGTCCAAGGCAATCATAAATTAAGAAAAAAAACATTTCTAAAAGACC TATCAATAATATCTCCTGTGTATTAAAATTTCCCTTTACCTAAAATCCGTATTCTTCATAATTTTCCTTTCCT ]
[-] EMBL CD067009 [ ACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGTTGGGCCCGTAAACGTCCAAGGCAATCATAAATTAAGAAAAAAAACATTTCTAAAAGACCcctc ]
[+] EMBL CD063237 [ AGTTTAGCTTCACAACAACTCCCTCTTCGATGTTGGGCCCGTAAACGTCCAAGGCAATCATAAATTAAGAAAAAAAACATTTCTAAAAGACC TATCAATAATATCTCCTGTGTATTAAAATTTCCCTTTACCTAAAATCCATATTCTTCATAATTCTCCTTTTCTACATATCTTTCCTCTGTTTTCAAATCATTTATCTTGCGTAAAAGAAATACGAAAAAATAGGCACCTATTGATCATTTTTGTGTGCTTTTCAATATTTTACTGACACCACATAACAATCTAAAGCATCTCTTGTTCTTCGTTTCCTAATTAAAATTATTTTGGTTCAAAAAAAACCCATTCAAGTTATAGTTTTCAG ]
[+] EMBL CD191239 [ ATAAATTAAGAAAAAAAACATTTCTAAAAGACC TATCAATAATATCTCCTGTGTATTAAAATTTCCCTTTACCTAAAATCCGTATTCTTCATAATTTTCCTTTTCTACATATCTTTCCTCTGTTTTCAAGTCATTTATCTTGCGTAAAAGAAATACGAAAAAATAGGCACCTATTGATCATTTTTGTGTGCTTTTCAATATTTTACTGACACCACATAACAATCTAAAGCATCTCTTGTTCTTCGTTTCCTAATTAAAATTATTTTGGTTC AAAAAAACCCATTCAAGTTATAGTTTTC ]
[-] EMBL CD134299 [ ATAAATTAAGAAAAAAAACATTTCTAAAAGACC TATCAATAATATCTCCTGTGTATTAAAATTTCCCTTTACCTAAAATCCGTATTCTTCATAATTTTCCTTTTCTACATATCTTTCCTCTGTTTTCAAATCATTTATCTTGCGTAAAAGAAATACGAAAAAATAGGCACCTATTGATCATTTTTGTGTGCTTTTCAATATTTTACTGACACCACATAACAATCTAAAGCATCTCTTGTTCTTCGTTTCCTAATTAAAATTATTTTGGTTC AAAAAAACCCATTCAAGTTATAGTTTTCA ]
[+] EMBL CD191309 [ ATAAATTAAGAACAAAAACATTTCTAAAAGACC TATCAATAATATCTCCTGTGTATTAAAATTTCCCTTTACCTAAAATCCGTATTCTTCATAATTTTCCTTTTCTACATATCTTTCCTCTGTTTTCAAGTCATTTATCTTGCGTAAAAGAAATACGAAAAAATAGGCACCTATTGATCATTTTTGTGTGCTTTTCAATATTTTACTGACACCACATAACAATCTAAAGCATCTCTTGTTCTTCGTTTCCTAATTAAAATTATTTTGGTTC AAAAAAACCCATTCAAGTTATAGTTTTC ]
[+] EMBL CD126190 [ TAAAAGACC TATCAATAATATCTCCTGTGTATTAAAATTGCCCTTTACCTATAATCCGTATTCTTCATAATTTTCCTTTTCTACATATCTTTCCTCTGTTTTCAAATCATTTATCTTGCGTAAAAGAAATACGAAAAAATAGGCACCTATTGATCATTTTTGTGTGCTTTTCAATATTTTACTGACACCACATAACAATCTAAAGCATCTCTTGTTCTTCGTTTCCTAATTAAAATTATTTTGGTTC AAAAAACCCATTCAAGTTATAGTTTTCAGTCGAATATCTAGTCGCCGATTAGTTTAAACTTGTTACCTTCCCCTAACTTATACTTTTTGTTTAATCTTTTAACATTGTGTGTGTGTGTGTTGTTTGATTATTGTTCAGAGTAG TCACAATTTCTTGCTTT CTAAAT ]
[-] EMBL CD149497 [ GTCGCCGATTAGTTTAAACTTGTTACCTTCCCCTAACTTATACTTTTTGTTTAATCTTTTAACATTGTGTGTGTGTGTGTTGTTTGATTATTGTTCAGAGTAGTTCACAATTTCTTGCTTTACTAAATTTCCAGCGTTGAACACTTCACCTTTTTTTTCTCTGCTATAGTCACAGCGCTTGTTTCACATTGATCTCATCCGTTTATAAACATT]
consensusID : consensus_11085#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 404 fasta sequence
[GCGTTACCCCTGATGAAACAAACTGCTGGACATAACGCAGATGTCGGTAGCAGCAGCACAACCACAAGTAGCACAACTATTAGTCAAAGTAGCTCTCTTGTCAACACTGCATCTACTCCTTTAATTACTTCGAAAGAGGAATCTGAAGATACCGAAGAGTCTGTTGAAGCGGAAACCTCCGGTACTTCTAGTCGTGTACGGCGAAGTACACGTAGAAGAAACACTACTTCAACTACCACAACTTCGAGTCGTCCACGCAACCGGACTAGTCGGGATTCATCACTTCTGGCTACTGTTTCAAAGGCTGCTTCAACCACTTCATCTCATTCTAATCTCGTCGCAACCCCATCGAGCTCTACCGCATGCTCGTTGGGTACAACAAATCAGACTGTAAAGTGTTCTAG]
[-] EMBL CD148401 [GCGTTACCCCTGATGAAACAAACTGCTGGACATAACGCAGATGTCGGTAGCAGCAGCACAACCACAAGTAGCACAACTATTAGTCAAAGTAGCTCTCTTGTCAACACTGCATCTACTCCTTTAATTACTTCGAAAGAGGAATCTGAAGATACCGAAGAGTCTGTTGAAGCGGAAACCTCCGGTACTTCTAGTCGTGTACGGCGAAGTACACGTAGAAGAAACACTACTTCAACTACCACAACTTCGAGTCGTCCACGCAACCGGACTAGTCGGGATTCATCACTTCTGGCTACTGTTTCAAAGGCTGCTTCAACCACTTCATCTCATTCTAATCTCGTCGCAACCCCATCGAGCTCTACCGCATGCTCGTTGGGTACAACAAATCAGACTGTAAAGTGTTCTAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11085#0 CATCGAGCTTTAGTCACTAATGATAATCATGCTTCCAGTACTTCGTCTCATCCTAATCAT 60
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 CAGCTAACACATGTAATGTCCTCAACACTGACTCCAGCCACAACAACTAATATACCAACT 120
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 AAAGGTATAATAGTTCCTATTGCGTCTACTAATCCTAGTCCATTGTTAGTCCCATGTACG 180
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 GGTGGTGCTTCAGATCCATCCTCAGTAAAACAATTTCCATTAGATAATCCAACTAACAAT 240
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 GTTTCTAATGGTGATTGGCGTTCAGCCACATCTTCTTCCAGCTTTGTTTCTGCTCAAGGG 300
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 CATGCAAATCGTGACGATCAAGAAGTGAAATCAAATGGTATTTGTGATGTTAGTCAAAGG 360
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 ACTTCCGATGGCACCTGGTCTTCGTCCAAAAATGGTGTTCATCGGTGCCGGATGTCTGGT 420
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 TCAGTGCCGTCCACATCCTCTGCCTTGCCGACAACTACTGATTCTTCATCATCTTCCACT 480
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 TCGAGCGGTAAGATGAAACAAACTGCTGGACATAACGCAGATGTCGGTAGCAGCAGCACA 540
consensus_11085#1 GCGTTACCCCTGATGAAACAAACTGCTGGACATAACGCAGATGTCGGTAGCAGCAGCACA 60
** *************************************************
consensus_11085#0 ACCACAAGTAGCACAACTATTAGTCAAAGTAGCTCTCTTGTCAACACTGTATCTACTCCT 600
consensus_11085#1 ACCACAAGTAGCACAACTATTAGTCAAAGTAGCTCTCTTGTCAACACTGCATCTACTCCT 120
************************************************* **********
consensus_11085#0 TTAATTACTTCGAAAGAGGAATCTGAAGATACCGAAGAGTCTGTTGAAGCGGAAACCTCT 660
consensus_11085#1 TTAATTACTTCGAAAGAGGAATCTGAAGATACCGAAGAGTCTGTTGAAGCGGAAACCTCC 180
***********************************************************
consensus_11085#0 GGTACTTCTAGTCGTGTACGGCGAAGTACACGTAGAAGAAACACTACTTCAACTACCACA 720
consensus_11085#1 GGTACTTCTAGTCGTGTACGGCGAAGTACACGTAGAAGAAACACTACTTCAACTACCACA 240
************************************************************
consensus_11085#0 ACTTCGAATCGTCCACGCAACCGGACTAGTCGGGATTCATCACTTCTGGCTACTGTTTCA 780
consensus_11085#1 ACTTCGAGTCGTCCACGCAACCGGACTAGTCGGGATTCATCACTTCTGGCTACTGTTTCA 300
******* ****************************************************
consensus_11085#0 AAGGCTGCTTCAACCACTTCATCTCATTCTAATCTCGTCGCAACCCCATCGAGCTCTACC 840
consensus_11085#1 AAGGCTGCTTCAACCACTTCATCTCATTCTAATCTCGTCGCAACCCCATCGAGCTCTACC 360
************************************************************
consensus_11085#0 GCATGCTCGTTGGGTACAACAAATCAGACTGTAAAGTGTTCTAGCATGGGTACCAGTAAT 900
consensus_11085#1 GCATGCTCGTTGGGTACAACAAATCAGACTGTAAAGTGTTCTAG---------------- 404
********************************************
consensus_11085#0 GATAGTAGTTCAACGGTAAATGGAGCTTCAAGTTCTAATGTTGTACTTCGCCAATTCGAA 960
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 GCACACACTGCTATTCTAGCCGCTCGAAGCCCAGTTTTTGCTGCGATGTTTGGACATGGC 1020
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 ATGGAGGAGTCCAGAGCGAATAGGGTGGAAATCACGGACATGGAGCCAGATACCGTTGCA 1080
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 GAAGTTTTGCGTTACATATATACGGGACAAGTTGTTGGTATGAATCGACTCGCTCACGAG 1140
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 CTATTGGCCGCGGCTGACAAGTACCAGTTGGAACGATTAAAGACAATGTGTGAAGAGGCT 1200
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 CTTGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATATGCAT 1260
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 AACGCAGAACAATTGAAAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTG 1320
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 TGCGAAACTGAAGGCTATGAACAGCTAGTTCGACATCGTCCACGTCTACTAAATGAGTGC 1380
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 TTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGTTGGGCCCGTAAACGTCCAAGG 1440
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 CAATCATAAATTAAGAAAAAAAACATTTCTAAAAGACCTATCAATAATATCTCCTGTGTA 1500
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 TTAAAATTTCCCTTTACCTAAAATCCGTATTCTTCATAATTTTCCTTTTCTACATATCTT 1560
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 TCCTCTGTTTTCAAATCATTTATCTTGCGTAAAAGAAATACGAAAAAATAGGCACCTATT 1620
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 GATCATTTTTGTGTGCTTTTCAATATTTTACTGACACCACATAACAATCTAAAGCATCTC 1680
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 TTGTTCTTCGTTTCCTAATTAAAATTATTTTGGTTCAAAAAAACCCATTCAAGTTATAGT 1740
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 TTTCAGTCGAATATCTAGTCGCCGATTAGTTTAAACTTGTTACCTTCCCCTAACTTATAC 1800
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 TTTTTGTTTAATCTTTTAACATTGTGTGTGTGTGTGTTGTTTGATTATTGTTCAGAGTAG 1860
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 TCACAATTTCTTGCTTTCTAAATTTCCAGCGTTGAACACTTCACCTTTTTTTTCTCTGCT 1920
consensus_11085#1 ------------------------------------------------------------
consensus_11085#0 ATAGTCACAGCGCTTGTTTCACATTGATCTCATCCGTTTATAAACATT 1968
consensus_11085#1 ------------------------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||