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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11087#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 32 consensus length = 498 fasta sequence
[CAAAAACGATGTCGCGTGACGGAAAAACGGCAGTTCGGCTGATGCGACCAGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA-GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT-TACAACCACCTGATGCCTACAAGGCA-TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGAAACTGCAGCAGAGGTACAAATCAAATGAAAACCCTTGGTTTTTCCACAAACTACGTTTCTAATATAAGGATTATTATGAAAATAACTCTAATAAAAGAGGGGGATCCGCAAAAAAAAAAA]
[+] EMBL CD148062 [CAAAAACGATGTCGTGTGTGGGAAAAACGGCAGGTCGGCTGATGCGACCAGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGAGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATT ]
[+] EMBL CD136230 [ AAAAACGATGTCGCGTGACGGAAAAACGGCAGTTCGGCTGATGCGACCAGGAGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAA ]
[-] EMBL CD097491 [ AAAAGCGATGTCGCGTGACGGAAAAACGGCAGTTCGGCTGATGCGACCAGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTG ]
[+] EMBL CD148144 [ AAAAACGATGTCGCGTGACGGAAAAACGGCAGTTCGGCTGATGCGACCAGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATT ]
[+] EMBL CD148125 [ AAAACGATGTCGCGTGACGGAAAAACGGCAGTTCGGCTGATGCGACCAGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATT ]
[+] EMBL CD148115 [ AAAACGATGTCGCGTGACGGAAAAACGGCAGTTCGGCTGATGCGACCAGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCG ]
[-] EMBL CD147947 [ AAACGATGTCGCGTGACGGAAAAACGGCAGTTCGGCTGATGCGACCAGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGTTAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTG ]
[+] EMBL CD144238 [ GTCGCGTGACGGAAAAACGGCAGTTCGGCTGATGCGACCAGGTGTCGTTGTCTTGGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGA ]
[+] EMBL AI068320 [ AAAACGGCAGTTCGGCTGATGCGACCAGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGAAACTGCAGCAGAGGTACAAATCAAATGAAAACCCTTGGTTTTTCCACAAACTACGTTTCTAATATAAGGATTATTATGAAAATAACTCTAATAAAAGAG ]
[+] EMBL AI820454 [ AAACGGCAGTTCGCCTGATGCGACCAGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCATTTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGC ATG AAGAC AGT CTTACG AAGAA GCG AATTAGAGGCC AGCTG AACTGCAGCAGAGGT CAATCCAATTG AACCCTTGGTTTT CACAAAC ACGTTTCT ATATAAGG GTATTATG GAATAAC CCCAT AAAGAGGGGGATCCGCAAAAAAAAAAA]
[+] EMBL AA791328 [ TGATGCGACCAGGTGTCATTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAAGGCCGATCTAAAATCAAACCTTTTGTGAAGGTgt ]
[+] EMBL CD090730 [ GCGACCAGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAA ]
[+] EMBL CD136342 [ AGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGct ]
[+] EMBL CD136316 [ AGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGA ]
[+] EMBL CD136319 [ AGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAA ]
[+] EMBL CD193732 [ AGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAA ]
[+] EMBL CD137661 [ TGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCTTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGAAACTGCAGCAGAGG ]
[+] EMBL CD137675 [ TGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGAAACTGCAGCAGAGG ]
[+] EMBL CD137864 [ TGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGGTGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGAAACTGCAGCAGAGGTACAAATCA ]
[+] EMBL CD137685 [ TGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAATATACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGAAACTGCAGCAGAGG ]
[+] EMBL CD137741 [ TGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGAAACTGCAGCAGGGG ]
[+] EMBL CD137785 [ TGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGAAACTGCAGCAGAGG ]
[+] EMBL CD137882 [ TGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAGACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGGATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGGATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGAAACTGCAGCAGAGG ]
[-] EMBL BG931714 [ TCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGAt ]
[-] EMBL BG931586 [ TCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGAa ]
[+] EMBL CD131562 [ TTACACAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAAGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAA ]
[+] EMBL CD131445 [ TTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGAAACTGCAGCAGAGGTACAAATCAAATGAAAACCCTTGGTTTTTCCACAAACTACGTTTCTAATATAAGGATTATTATGAAAA ]
[+] EMBL CD131546 [ TTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGAAACTGCAGCAGAGGTACAAATCAAATGAAAACCCTTGGTTTTTCCACAAACTACGTTTCTAATATAAGGATTATTATGAAAAT ]
[+] EMBL CD145909 [ GGAAAGAAACGGATGGAGA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAA ]
[+] EMBL CD145967 [ GGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAA ]
[+] EMBL CD145959 [ GGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAA ]
[-] EMBL CD148030 [ AAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTG ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||