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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11099#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 33 consensus length = 505 fasta sequence
[GACACAGGAGTGTTGCAAAGCATGTGAATATTGTCAAGCTATCAGGAAAGC-TGGTACTGAAAGTGAAGTGAT-AG-ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACATTCTTCCTCCTTCGAACCCACCCATTTACATCGATCTTATGGTAATGAGTTGAGTGAAATTGAACAGGACCATAGTTCGACCACTCAAAGTCCTTTGCAACACAACTAGCACAGATCACGGTGATCATCCTTTATGCTGCTGTCATGTTATTGGGTTTCATTTACCTCATCACTTACGTCTCTATCGTCGACTGTACAGTCTTGTTGACCATCGTTGTGT]
[+] EMBL CD177825 [GACACAGGAGTGTAGCAAAGCATGTGAATATTGTCAAGCTATCAGGAAAGC TGGCACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAAAATCCTTTGTATCCATGTTTGTCAAAACATTCAAATACATCCGCAGACTGTTCTGAAAACGCAGGATCTTTCTTAAAACCACCTACTTAATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGCCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCATGTTTCTTCCTCCTTCGAACCCACCCATTTACATCGATCTTATGGTAATGAGTTGAGTGAAATTGAACAGGACCATAGTTCGACTACTCAAAGT CTTTGCAACA ]
[+] EMBL CD177856 [ GTGTTGCAAAGCATGTGAATATTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ]
[+] EMBL CD177907 [ GTGTTGCAAAACCTGTGAATCTTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAAAAGACCATCCGGCTACCTTTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ]
[+] EMBL CD177888 [ GTGTTGCAAAGCATGTGAATATTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAAAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ]
[+] EMBL CD177898 [ GTGTTGCAAAACCTGTGAATCTTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ]
[+] EMBL CD177875 [ GTGTTGCAAAACCTGTGAATATGGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ]
[+] EMBL CD177886 [ GTGTTGCAAAACCTGTTAATATGGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ]
[+] EMBL CD177834 [ GTGTTGCAAAGCATGTGAATATTGACAAGCTATCAGGAAAGC TGGTCCTGAAAGTGAAGTGAT AGTATAACATCTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAAAACATTCAAATACATCCGCAAACTGTTCTGAAAACGCAGGATCTTTCTTAGAACCACCTACTTTATCTATCAAAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ]
[+] EMBL CD177871 [ GTGTTGCAAAACATGTGAATATTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ]
[+] EMBL CD177901 [ TGTTGCAAAGCATGTGAATATTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAGTACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCATGTTTCTTCCTCCTTCGAACCCACCCATTTACATCGATCTTATGGTAATGAGTTGAGTGAAATTGAACAGGACCATAGTTCGACCACTCAAAGTCCTTTGCAACA ]
[+] EMBL CD177838 [ TGTTGCAAACCATGTGAATATTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAAAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAAAACCACCTACTTCATCTATCAAAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ]
[+] EMBL CD177870 [ TGTTGCGAAGCATGTGAATATTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGCCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ]
[-] EMBL CD091788 [ TGTTGCAAAGCATGTGAATATTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACAc ]
[+] EMBL CD177810 [ AGCATGTGAATATTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGAGGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAAGCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ]
[+] EMBL CD177908 [ aaccTGTTAATCTGGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTGTGTCAAAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ]
[+] EMBL CD091445 [ ATAGTCAACCGGTCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGT ]
[+] EMBL CD091436 [ ATTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAGCCACCTACTTCATCTATCAGAAGACCATCCGGCTGCCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGT ]
[+] EMBL CD122235 [ ATTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGT ]
[-] EMBL CD178078 [ TTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTG ]
[-] EMBL CD178040 [ TTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTG ]
[-] EMBL CD177998 [ TTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCATGTTTCTTCCTCCTTCGAACCCACCCATTTACATCGATCTTATGGTAATGAGTTGAGTGAAATTGAACAGGACCATAGCTCGACCA ]
[-] EMBL CD160680 [ TTGTCAAGCTATCAGGAAAGCGTGGTACTGAAAGTGGA TGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGCTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCGGAGCAACg ]
[-] EMBL CD160687 [ TTGTCAAGCTATCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTG ]
[+] EMBL CD177812 [ TCAGGAAAGC TGGTACTGAAAGTGAAGTGAT AG ATAACAACTCAAATCAGGAGAATCCTTTGTATCCTTGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ]
[+] EMBL CD177851 [ aaGAAATC TGGTACTGAAAGTGAAGTGAT AT ATAACACCTCAACTCAGGAGAATCCTTTGTATCCATGTTTGTCAAAACATTCAAATACATCCGCAAACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAAAAGACCATCCGGCTACCTTTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCATGTTTCTTCCTCCTTCGAACCCACCCATTTACATCGATCTTATGGTAATGAGTTGAGTGAAATTGAACAGGACCATAGTTCGACCACTCAAAGTCCTTTGCAACA ]
[+] EMBL CD177847 [ aaGAAAGC TGGTTCTGAAGGTGAAGTGAT AT ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGACAAAACATTCAAATACATCCGCACACTGTTCTAAACACGCAGGATCTTTCTTAGAACCACCTACTTAATCTATCAAAAAACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ]
[+] EMBL CD177865 [ GAAAGTGAAGTGATAAT ATAACAACTCAAATCAGGAGAATCCTTTGTATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACACAGGATCTTTCTTATAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ]
[+] EMBL CD177842 [ ATCAGGAGAATCCTTTGTATCTATGTTCGTCAAAACATTCAAATACATCCGCAGGCTGTTCTGAAAACGCAGGATCTTTCTTAAAACCACTTACTTCATCTATCAAAAAACCATCCGGCTACCTTTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ]
[-] EMBL CD155632 [ ATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCATGTTTCTTCCTCCTTCGAACCCACCCATTTACATCGATCTTATGGTAATGAGTTGAGTGAAATTGAACAGGACCATAGTTCGACCACTCAAAGTCC TTACAACACAACTAGCACAGATCACGGTGATCATCCTTTATGCTGCTGTCATGTTATTGGGTTTCATTTACCTCAT ]
[-] EMBL CD155590 [ ATCCATGTTTGTCAGAACATTCAAATACATCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCATGTTTCTTCCTCCTTCGAACCCACCCATTTACATCGATCTTATGGTAATGAGTTGAGTGAAATTGAACAGGACCATAGTTCGACCACTCAAAGTCC TTACAACACAACTAGCACAGATCACGGTGATCATCCTTTATGCTGCTGTCATGTTATTGGGTTTCATTTACCTCAT ]
[+] EMBL CD177850 [ agTACATCCGCAGACTGTTCTGAAAACGCAGGATCTTTCTTAAAACCACCTACTTCATCTATCAAAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCATGTTTCTTCCTCCTTCGAACCCACCCATTTACATCGATCTTATGGTAATGAGTTGAGTGAAATTGAACAGGACCATAGTTCGACCACTCAAAGTCCTTTGCAACA ]
[-] EMBL CD160667 [ TCCGCAGACTGTTCTGAAGACGCAGGATCTTTCTTAGAACCACCTACTTCATCTATCAGAAGACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACA CCTTTGCATGTTTCTTCCTCCTTCGAACCCACCCATTTACATCGATCTTATGGTAATGAGTTGAGTGAAATTGAACAGGACCATAGTTCGACCACTCAAAGTCC TTACAACACAACTAGCACAGATCACGGTGATCATCCTTTATGCTGCTGTCATGTTATTGGGTTTCATTTACCTCATCACTTACGTCTCTATCGTCGACTGTACAGTCTTGTTGACCATCGTTGTGT]
[+] EMBL CD177854 [ aaaaGCAGGATCTTTCTTAAAACCACCTACTTCATCTATCAAAAAACCATCCGGCTACCTCTGTACAACACTCCCGCCCAAACCCTGTCATTCCAACTATAGAACTGTAGCATGTGATCTACACCCTTTGCAACA ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||