cluster # 11101

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Schistosoma mansoni
cluster # 11101 cluster # 11101 Sequences # 33 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11101#0 length = 1503 sequences # 30

consensus_11101#1 length = 375 sequences # 3

consensusID : consensus_11101#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 30
consensus length = 1503
fasta sequence

                              [GATTTTGCGCGAGGTTGGGCACGCTAGTTGAAGTCAAAAGTGCTAGGGTTCTATCGTTGGGTCACAAATGTCTGATTACGCTGCATTTCAAACTTTGTTGTTACAACTTCAAAGCTCGGATAACGAATCTCGTACACGTTCGGAGACCGCGTACGATGCCATTACACCGACAACTCGATTCACTCTTCTCCTCCAAGTGTTAAACGACAAAAGCGTAATCTCCCAGTCTCGACATATGGCTGCAATTCTCGCACGCCGGCTACTAGTCAATGATTATGGTTCAGCATTCGAGCCTCTTCCAGTCGAAACAAAAAATTCAGCTAAGCAGCAGCTAGTTTTAATTTTAGTTCATGAAAGAGAACAATTAATGCGCAGAAAAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGCAATTCGATGATGATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGAAATCGCCTGCCACATTTTTGGATCAGTCCCATCACTATTTGGAAACCAAC-AGGCACAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTCTGACCCTTCAAGCTCAGAGCTTAGAGCTGC-GGGTTACGTGCCTTAGCTGCTTTTACTGTTCAAAATGCAACTGAAGACTCTGTACTTCAATCTCTCCGAGAATTGGTTCCCGTTGCACTACAGGCTATTGCTACTGCTATCCAAACAGATTCAGAAGATGATACACCTCTAAAAGCTTTAGTTGACATCGCAGATGCTGCGCATAAATACCTAAGACCTTATTTAGCGCCTACATTGGAGTTATGCTATAAGATATTGTGTAACGAAGAGCTTGAGGAAACGCAAAGACATCTAGCCTTGGAAGTGATCGTTACACTAGCAGAAAATATACCAGCGGGTGTAAGAAAGTCAGCCACTTTAATCGAGTCTCTTGTGGGGACATTGCTCAACATGATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTAACGATACGGTGCCTAGAGTACAAGCCAATGCGGGGGCTGCTCTAGTCAATTTCTGTGAGAAAGTACCACAGCACATTCTGGTAAATTACTTG]

[+] EMBL CD159302             [GATTTTGCGCGAGGTTGGGCACGCTAGTTGAAGTCAAAAGTGCTAGGGTTCTATCGTTGGGTCACAAATGTCTGATTACGCTGCATTTCAAACTTTGTTGTTACAACTTCAAAGCTCGGATAACGAATCTCGTACACGTTCGGAGACCGCGTACGATGCCATTACACCGACAACTCGATTCACTCTTCTCCTCCAAGTGTTAAACGACAAAAGCGTAATCTCCCAGTCTCGACATATGGCTGCAATTCTCGCACGCCGGCTACTAGTCAATGATTATGGTTCAGCATTCGAGCCTCTTCCAGTCGAAACAAAAAATTCAGCTAAGCAGCAGCTAGTTTTAATTTTAGTTCATGAAAGAGAACAATTAATGCGCAGAAAAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGCAATTCGATGATGATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGAAATCGCCTGCCACATTNTTGGATCAGTCCCATCACTATTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD159337             [GATTTTGCGCGAGGTTGGGCACGCTAGTTGAAGTCAAAAGTGCTAGGGTTCTATCGTTGGGTCACAAATGTCTGATTACGCTGCATTTCAAACTTTGTTGTTACAACTTCAAAGCTCGGATAACGAATCTCGTACACGTTCGGAGACCGCGTACGATGCCATTACACCGACAACTCGATTCACTCTTCTCCTCCAAGTGTTAAACGACAAAAGCGTAATCTCCCAGTCTCGACATATGGCTGCAATTCTCGCACGCCGGCTACTAGTCAATGATTATGGTTCAGCATTCGAGCCTCTTCCAGTCGAAACAAAAAATTCAGCTAAGCAGCAGCTAGTTTTAATTTTAGTTCATGAAAGAGAACAATTAATGCGCAGAAAAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGCAATTCGATGATGATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGAAATCGCCTGCCACATTTTTGGATCAGTCCCATCACTATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD153233             [GATTTTGCGCGAGGTTGGGCACGCTAGTTGAAGTCAAAAGTGCTAGGGTTCTATCGTTGGGTCACAAATGTCTGATTACGCTGCATTTCAAACTTTGTTGTTACAACTTCAAAGCTCGGATAACGAATCTCGTACACGTTCGGAGACCGCGTACGATGCCATTACACCGACAACTCGATTCACTCTTCTCCTCCAAGTGTTAAACGACAAAAGCGTAGTCTCCCAGTCTCGACATATGGCTGCAATTCTCGCACGCCGGCTACTAGTCAATGATTATGGTTCAGCATTCGAGCCTCTTCCAGTCGAAACAAAAAATTCAGCTAAGCAGCAGCTAGTTTTAATTTTAGTTCATGAAAGAGAACAATTAATGCGCAGAAAAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGCAATTCGATGATGATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGAAATCGCCTGCCACATTTTTGGATCAGTCCCATCACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD094786             [GATTTTGCGCGAGGTTGGGCACGCTAGTTGAAGTCAAAAGTGCTAGGGTTCTATCGTTGGGTCACAAATGTCTGATTACGCTGCATTTCAAACTTTGTTGTTACAACTTCTAAGCTCGGATAACGAATCTCGTACACGTTCGGAGACTGCGTACGATGCCATTACACCGACAACTCGATTCACTCTTCTCCTCCAAGTGTTAAACGACAAAAGCGTAATCTCCCAGTCTCGACATATGGCTGCAATTCTCGCACGCCGGCTACTAGTCAATGATTATGGTTCAGCATTCGAGCCTCTTCCAGTCGAGACAAAAAATTCAGCTAAGCAGCAGCTAGTTTTAATTTTAGTTCATGAAAGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD152558             [   TTTGCGCGAGGTTGGGCACGCTATTTGAAGTCAAAAGTGCTAGGGTTCTATCGTTGGGTCACAAATGTCTGATTACGCTGCATATTAAACTTTGTTGTTACAACTTCAAAGCTCGGATAACTAATCTCGTACACCTTCCGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD179417             [                           TTGAAGTC AAAGTGCTAGGGTTCTATCGTTGGGTCACAAATGTCTGATTACGCTGCATTTCAAACTTTGTTGTTACAACTTCAAAGCTCGGATAACGAATCTCGTACACGTTCGGAGACCGCGTACGATGCCATTACACCGACAACTCGATTCACTCTTCTCCTCCAAGTGTTAAACGACAAAAGCGTAATCTCCCAGTCTCGACATATGGCTGCAATTCTCGCACGCCGGCTACTAGTCAATGATTATGGTTCAGCATTCGAGCCTCTTCCAGTCGAAACAAAAAATTCAGCTAAGCAGCAGCTAGTTTTAATTTTAGTTCATGAAAGAGAACAATTAATGCGCAGAAAAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGCAATTCGATGATGATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGTAATCGCCTGCCACATTTTTGGATCAGTCCCATCACTATTTGGAAACCAACGAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD165705             [                                                                                                                                           TCGGAGACCGCGTACGATGCCATTACACCGACAACTCGATTCACTCTTCTCCTCCAAGTGTTAAACGACAAAAGCGTAATCTCCCAGTCTCGACATATGGCTGCAATTCTCGCACGCCGGCTACTAGTCAATGATTATGGTTCAGCATTCGAGCCTCTTCCAGTCGATACAAAAAATTCAGCTAAGCAGCAGCTAGTTTTAATTTTAGTTCATGAAAGAGAACAATTAATGCGCAGAAAAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGCAATTCGATGATGATGGTAATTCCGAATGGCCTGAGTTCACTTCCATTTTGCTTGAATGGTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD129219             [                                                                                                                                                                                                                                                               CCGGCTACTAGTCAATGATTATGGTTCAGCATTCGAGCCTCTTCCAGTCGAAACAAAAAATTCAGCTAAGCAGCAGCTAGTTTTAATTTTAGTTCATGAAAGAGAACAATTAATGCGCAGAAAAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGCAATTCGATGATGATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGAAATCGCCTGCCACATTTTTGGATCAGTCCCATCACTATTTGGAAACCAAC AGGCACAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTCTGACCCTTCAAGCTCAGAGCTTAGAGCTGC GGGTTACGTGCCTTAGCTGCTTTTACTGTTCAAAATGCAACTGAAGACTCTGTACTTCAATCTCTCCGAGAATTGGTTCCCGTTGCACTACAGGCTATTGCTACTGCTATCCAAACAGATTCAGAAGATGATACACCTCTAAAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD158635             [                                                                                                                                                                                                                                                                                                                                                                                                           CCGAGCTGGTTCGGATGCAATTCGATGATGATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGAAATCGCCTGCCACATTTTTGGATCAGTCCCATCACTATTTGGAAACCAAC AGGCACAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTCTGACCCTTCAAGCTCAGAGCTTAGAGCTGC GGGgtt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD191207             [                                                                                                                                                                                                                                                                                                                                                                                                                         ATGTAATTCGATGATGATGGTAATTCCGAATGGCATGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGAAATCGCCTGCCACATTTTTGGATCAGTCCCATCACTATTTGGAAACCAAC AGGCACAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTCTGACCCTTCAAGCTCAGAGCTTAGAGCTGCGGGGTTACGTGCCTTAGCTGCTTTTACTGTTCAAAATGCAACTGAAGACTCTGTACTTCAATCTCTCCGAGAATTGGTTCCCGTTGCACTACAGGCTATTGCTACTGCTATCCAAACAGATTCAGAAGATGATACACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD157103             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CACAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTCTGACCCTTCAAGCTCAGAGCTTAGAGCTGCGGGGTTACGTGCCTTAGCTGCTTTTACTGTTCAAAGTGCAACTGAAGACTCTGTACTTCAATCTCTCCGAGAATTGGTTCCCGTTGCACTACAGGCTATTGCTACTGCTATCCAAACAGATTCAGAAGATGATACACCTCTAAAAGCTTTAGTTGACATCGCAGATGCTGCGCATAAATACCTAAGACCTTATTTAGCGCCTACATTGGAGTTATGCTATAAGATATTGTGTAACGAAGAGCTTGAGGAAACGCAAAGACATCTAGCCTTGGAAGTGATCGTTACACTAGCAGAAAATATACCAGCGGGTGTAAGAAAGTCAGCCACTTTAATCGAGTCTCTTGTGGGGACATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD118293             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCTGACCCTTCAAGCTCAGAGCTTAGAGCTGCGGGGTTACGTGCCTTAGCTGCTTTTACTGTTCAAAATGCAACTGAAGACTCTGTACTTCAATCTCTCCGAGAATTGGTTCCCGTTGCACTACAGGCTATTGCTACTGCTATCCAAACAGATTCAGAAGATGATACACCTCTAAAAGCTTTAGTTGACATCGCAGATGCTGCGCATAAATACCTAAGACCTTATTTAGCGCCTACATTGGAGTTATGCTATAAGATATTGTGTAACGAAGAGCTTGAGGAAACGCAAAGACATCTAGCCTTGGAAGTGATCGTTACACTAGCAGAAAATATACCAGCGGGTGTCAGAAAGTCAGCCACTTTAGTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD119319             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCTGTACTTCAATCTCTCCGAGAATTGGTTCCCGTTGCACTACAGGCTATTGCTACTGCTATCCAAACAGATTCAGAAGATGATACACCTCTAAAAGCTTTAGTTGACATCGCAGATGCTGCGCATAAATACCTAAGACCTTATTTAGCGCCTACATTGGAGTTATGCTATAAGATATTGTGTAACGAAGAGCTTGAGGAAGCGCAAAGACATCTAGCCTTGGAAGTGATCGTTACACTAGCAGAGAATATACCAGCGGGTGTAAGAAAGTCAGCCACTTTAATCGAGTCTCTTGTGGGGACATTGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD194270             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CACTACAGGCTATTGCTACTGCTATCCAAACAGATTCAGAAGATGATACACCTCTAAAAGCTTTAGTTGACATCGCAGATGCTGCGCATAAATACCTAAGACCTTATTTAGCGCCTACATTGGAGTTATGCTATAAGATATTGTGTAACGAAGAGCTTGAGGAAACGCAAAGACATCTAGCCTTGGAAGTGATCGTTACACTAGCAGAAAATATACCAGCGGGTGTAAGAAAGTCAGCCACTTTAATCGAGTCTCTTGTGGGGACATTGCTCAACATGATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTG                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD169290             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCTATCCAAACAGATTCAGAAGATGATACACCTCTAAAAGCTTTAGTTGACATCGCAGATGCTACGCATAAATACCTAAGACCTTATTTAGCGCCTACATTGGAGTTATGCTATAAGATATTGTGTAACGAAGAGCTTGAGGAAACGCAAAGACATCTAGCCTTGGAAGTGATCGTTACACTAGCAGAAAATATACCAGCGGGTGTAAGAAAGTCAGCCACTTTAATCGAGTCTCTTGTGGGGACATTGCTCAACATGATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACT                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD119516             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GACATCGCAGATGCTGCGCATAAATACCTAAGACCTTATTTAGCGCCTACATTGGAGTTATGCTATAAGATACTGTGTAACGAAGAGCTTGAGGAAACGCAAAGACATCTAGCCTTGGAAGTGATCGTTACACTAGCAGAAAATATACCAGCGGGTGTAAGAAAGTCAGCCACTTTAATCGAGTCTCTTGTGGGGACATTGCTCAACATGATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTA                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AI977025             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AACGCAAAGACATCTAGCCTTGGAAGTGATCGTTACACTAGCAGAAAATATACCAGCGGGTGTAAGAAAGTCAGCCACTTTAATCGAGTCTCTTGTGGGGACATTGCTCAACATGATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGT                                                                                                       ]
[+] EMBL CD146710             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAAGTCAGCCACTTTAATCGAGTCTCTTGTGGGGACATTGCTCAACATGATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTCCCGCGTGCAGTGAAGGGAGCAGCANACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGCCCTCCCTCGTCTTAGT                                                                                                                                                                                                                        ]
[+] EMBL CD185648             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGGGGACATTGCTCAACATGATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCACCATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGC                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD116121             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTAACGATACGGTGCCTAGAGTACAAGCCAATGCGGGGGCTGCTCTAGTCAATTTCTGTGAGAAAGTACCACAGCACATTCTGGTANATTACTT ]
[-] EMBL CD116053             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTAACGATACGGTGCCTAGAGTACAAGCCAATGCGGGGGCTGCTCTAGTCAATTTCTGTGAGAAAGTACCACAGCACATTCTGGTAAATTACTTG]
[-] EMBL CD116280             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTAACGATACGGTGCCTAGAGTACAAGCCAATGCGGGGGCTGCTCTAGTCAATTTCTGTGAGAAAGTACCACAGCACATTCTGGTAAATTACTTG]
[-] EMBL CD116291             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTAACGATACGGTGCCTAGAGTACAAGCCAATGCGGGGGCTGCTCTAGTCAATTTCTGTGAGAAAGTACCACAGCACATTCTGGTAAATTACTTG]
[-] EMBL CD116162             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTAACGATACGGTGCCTAGAGTACAAGCCAATGCGGGGGCTGCTCTAGTCAATTTCTGTGAGAAAGTACCACAGCACATTCTGGTAAATTACTTG]
[-] EMBL CD163731             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACAGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTAACGATACGGTGCCTAGAGTA                                                                        ]
[+] EMBL CD111524             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCCGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTta                                                                                           ]
[+] EMBL CD111479             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTAA                                                                                           ]
[-] EMBL CD111604             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTAAC                                                                                          ]
[-] EMBL CD110949             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCANATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTAAC                                                                                          ]
[-] EMBL CD098460             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTAAC                                                                                          ]




>consensus_11101#0
GATTTTGCGCGAGGTTGGGCACGCTAGTTGAAGTCAAAAGTGCTAGGGTTCTATCGTTGG
GTCACAAATGTCTGATTACGCTGCATTTCAAACTTTGTTGTTACAACTTCAAAGCTCGGA
TAACGAATCTCGTACACGTTCGGAGACCGCGTACGATGCCATTACACCGACAACTCGATT
CACTCTTCTCCTCCAAGTGTTAAACGACAAAAGCGTAATCTCCCAGTCTCGACATATGGC
TGCAATTCTCGCACGCCGGCTACTAGTCAATGATTATGGTTCAGCATTCGAGCCTCTTCC
AGTCGAAACAAAAAATTCAGCTAAGCAGCAGCTAGTTTTAATTTTAGTTCATGAAAGAGA
ACAATTAATGCGCAGAAAAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGCAATTCGA
TGATGATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTC
ACCTGATTCCGGGTTACGCGAAATCGCCTGCCACATTTTTGGATCAGTCCCATCACTATT
TGGAAACCAACAGGCACAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTC
TGACCCTTCAAGCTCAGAGCTTAGAGCTGCGGGTTACGTGCCTTAGCTGCTTTTACTGTT
CAAAATGCAACTGAAGACTCTGTACTTCAATCTCTCCGAGAATTGGTTCCCGTTGCACTA
CAGGCTATTGCTACTGCTATCCAAACAGATTCAGAAGATGATACACCTCTAAAAGCTTTA
GTTGACATCGCAGATGCTGCGCATAAATACCTAAGACCTTATTTAGCGCCTACATTGGAG
TTATGCTATAAGATATTGTGTAACGAAGAGCTTGAGGAAACGCAAAGACATCTAGCCTTG
GAAGTGATCGTTACACTAGCAGAAAATATACCAGCGGGTGTAAGAAAGTCAGCCACTTTA
ATCGAGTCTCTTGTGGGGACATTGCTCAACATGATGTCAGAAGTTGATGAAGAACCTGAC
TGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAA
CTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGC
CGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATG
GCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATA
TTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGC
AATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGT
ACTGTGCTCCCAGCATTAGTTCAAACACTTAACGATACGGTGCCTAGAGTACAAGCCAAT
GCGGGGGCTGCTCTAGTCAATTTCTGTGAGAAAGTACCACAGCACATTCTGGTAAATTAC
TTG

consensusID : consensus_11101#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 375
fasta sequence

                              [AAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGTAATTCGATGATGATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGAAATCGCTTGCCACATTTTTGGATCAGTCCCATCACTATTTGGAAACCAACAGGCACAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTTTGACCCTTCAAGCTCAGAGCTTAGAGCTGCGGGGTTACGTGCCTTAGCTGCTTTTACTGTTCAAAATGCAACTGAAGACTCTGTACTTCAATCTC-TCCGAGAATTGGTTCCCGTTGCACTACAGGCTATTGCTNCTGCTATCTCTTTCTGTT]

[-] EMBL CD191343             [AAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGTAATTCGATGATGATGGTAATTCCGAATGGCGTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGAAATCGCCTGCCACATTTTTGGATCAGTCCCATCACTATTTGGAAACCAACAGGCACAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTCTGACCCTTCAAGCTCAGAGCTTAGAGCTGCGGGGTTACGTGCCTTAGCTGCTTTTACTGTTCAAAATGCAACTGAAGACTCTGTACTTCAATCTC TCCGAGAATTGGTTCCCGTTGCACTACAGGCTATTGCTNCTGCTATCTCTTTCTGTT]
[-] EMBL CD166449             [                                                ATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGAAATCGCTTGCCACATTTTTGGATCAGTCCCATCACTATTTGGAAACCAACAGGCACAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTTTGACCCTTCAAGCTCAGAGCTTAGAGCTGCGGGGTTACGTGCCTTAGCTGCTTTTACTGTTCAAAATGCAACTGAAGACTCTGTACTTCAATCTCTTCCGAGAATT                                               ]
[-] EMBL CD166377             [                                                ATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGAAATCGCTTGCCCCATTTTTGGATCAGTCCCATCCCTAAATGAAAACCAACAGGCCCAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTTTGACCCTTCAAGCTCAGAGCTTAGAGCTGCGGGGTTACGTGCCTTAGCTGCTTTTACTGTTCAAAATGCAACTGAAGACTCTGGTCTTC ATCTC TCCG GAATa                                               ]




>consensus_11101#1
AAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGTAATTCGATGATGATGGTAATTCCG
AATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTAC
GCGAAATCGCTTGCCACATTTTTGGATCAGTCCCATCACTATTTGGAAACCAACAGGCAC
AAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTTTGACCCTTCAAGCTCAG
AGCTTAGAGCTGCGGGGTTACGTGCCTTAGCTGCTTTTACTGTTCAAAATGCAACTGAAG
ACTCTGTACTTCAATCTCTCCGAGAATTGGTTCCCGTTGCACTACAGGCTATTGCTNCTG
CTATCTCTTTCTGTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11101#0      GATTTTGCGCGAGGTTGGGCACGCTAGTTGAAGTCAAAAGTGCTAGGGTTCTATCGTTGG 60
consensus_11101#1      ------------------------------------------------------------
                                                                                   

consensus_11101#0      GTCACAAATGTCTGATTACGCTGCATTTCAAACTTTGTTGTTACAACTTCAAAGCTCGGA 120
consensus_11101#1      ------------------------------------------------------------
                                                                                   

consensus_11101#0      TAACGAATCTCGTACACGTTCGGAGACCGCGTACGATGCCATTACACCGACAACTCGATT 180
consensus_11101#1      ------------------------------------------------------------
                                                                                   

consensus_11101#0      CACTCTTCTCCTCCAAGTGTTAAACGACAAAAGCGTAATCTCCCAGTCTCGACATATGGC 240
consensus_11101#1      ------------------------------------------------------------
                                                                                   

consensus_11101#0      TGCAATTCTCGCACGCCGGCTACTAGTCAATGATTATGGTTCAGCATTCGAGCCTCTTCC 300
consensus_11101#1      ------------------------------------------------------------
                                                                                   

consensus_11101#0      AGTCGAAACAAAAAATTCAGCTAAGCAGCAGCTAGTTTTAATTTTAGTTCATGAAAGAGA 360
consensus_11101#1      ------------------------------------------------------------
                                                                                   

consensus_11101#0      ACAATTAATGCGCAGAAAAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGCAATTCGA 420
consensus_11101#1      -----------------AAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGTAATTCGA 43
                                        *********************************** *******

consensus_11101#0      TGATGATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTC 480
consensus_11101#1      TGATGATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTC 103
                       ************************************************************

consensus_11101#0      ACCTGATTCCGGGTTACGCGAAATCGCCTGCCACATTTTTGGATCAGTCCCATCACTATT 540
consensus_11101#1      ACCTGATTCCGGGTTACGCGAAATCGCTTGCCACATTTTTGGATCAGTCCCATCACTATT 163
                       *************************** ********************************

consensus_11101#0      TGGAAACCAACAGGCACAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTC 600
consensus_11101#1      TGGAAACCAACAGGCACAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTT 223
                       *********************************************************** 

consensus_11101#0      TGACCCTTCAAGCTCAGAGCTTAGAGCTGCGGG-TTACGTGCCTTAGCTGCTTTTACTGT 659
consensus_11101#1      TGACCCTTCAAGCTCAGAGCTTAGAGCTGCGGGGTTACGTGCCTTAGCTGCTTTTACTGT 283
                       ********************************* **************************

consensus_11101#0      TCAAAATGCAACTGAAGACTCTGTACTTCAATCTCTCCGAGAATTGGTTCCCGTTGCACT 719
consensus_11101#1      TCAAAATGCAACTGAAGACTCTGTACTTCAATCTCTCCGAGAATTGGTTCCCGTTGCACT 343
                       ************************************************************

consensus_11101#0      ACAGGCTATTGCTACTGCTATCCAAACAGATTCAGAAGATGATACACCTCTAAAAGCTTT 779
consensus_11101#1      ACAGGCTATTGCTNCTGCTATCTCTTTCTGTT---------------------------- 375
                       ************* ********        **                            

consensus_11101#0      AGTTGACATCGCAGATGCTGCGCATAAATACCTAAGACCTTATTTAGCGCCTACATTGGA 839
consensus_11101#1      ------------------------------------------------------------
                                                                                   

consensus_11101#0      GTTATGCTATAAGATATTGTGTAACGAAGAGCTTGAGGAAACGCAAAGACATCTAGCCTT 899
consensus_11101#1      ------------------------------------------------------------
                                                                                   

consensus_11101#0      GGAAGTGATCGTTACACTAGCAGAAAATATACCAGCGGGTGTAAGAAAGTCAGCCACTTT 959
consensus_11101#1      ------------------------------------------------------------
                                                                                   

consensus_11101#0      AATCGAGTCTCTTGTGGGGACATTGCTCAACATGATGTCAGAAGTTGATGAAGAACCTGA 1019
consensus_11101#1      ------------------------------------------------------------
                                                                                   

consensus_11101#0      CTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGA 1079
consensus_11101#1      ------------------------------------------------------------
                                                                                   

consensus_11101#0      ACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCG 1139
consensus_11101#1      ------------------------------------------------------------
                                                                                   

consensus_11101#0      CCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAAT 1199
consensus_11101#1      ------------------------------------------------------------
                                                                                   

consensus_11101#0      GGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTAT 1259
consensus_11101#1      ------------------------------------------------------------
                                                                                   

consensus_11101#0      ATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTG 1319
consensus_11101#1      ------------------------------------------------------------
                                                                                   

consensus_11101#0      CAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAG 1379
consensus_11101#1      ------------------------------------------------------------
                                                                                   

consensus_11101#0      TACTGTGCTCCCAGCATTAGTTCAAACACTTAACGATACGGTGCCTAGAGTACAAGCCAA 1439
consensus_11101#1      ------------------------------------------------------------
                                                                                   

consensus_11101#0      TGCGGGGGCTGCTCTAGTCAATTTCTGTGAGAAAGTACCACAGCACATTCTGGTAAATTA 1499
consensus_11101#1      ------------------------------------------------------------
                                                                                   

consensus_11101#0      CTTG 1503
consensus_11101#1      ----