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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11103#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 29 consensus length = 1784 fasta sequence
[GACTATAAGTTTTTGGCGGCTCTTGAAGTAATTTTCCAGTCATGTCGGTT-AACGCTGCTAGCATGCTCACCCTCGGGGGAGAGAGGACGAGTGGCGAATCTGTTCGCAAACAAAATGTTCTCGCTGCTTGCTCAATCGCTAACATCGTTAAGACCAGCCTAGGTCCTGTCGG-TCTTGATAAAATGCTGGTAGATGACGTTGGAGACGTGACAATCACCAACGATGGGGCCACTATCTTGAAATTGCTTGACGTTGAGCACCCTGCAGCAAAAA-TTC-TTGTTCAGCTTGCACAATTACAAGATGAAGAAGTTGGGGATGGGACAACATCTGTTGTAATTCTGGCTGCTGCACTGCTCAAGAATGCAGACGAATTGATTTCTCGTTTTGTTCATCCTACCACAGTAATCAATGGTTATCGGTTGGCCTGTCGAGAAGCTTGTAAGTACATACAGGAACACATGGCATATGATGTAAATAAGCTGGGTAAGGCTGGGCTAATAAATGTGGCACGAACAGCTATGTCAAGCAAGCTTA-TCAATTTAGATGCCGACATGTTTTCACAAATGGCTGTGGATGCACTTATGGCTGTTGAAGTCTCTGGAGGCCCCAAAGGTCCTGTTTATCCCATAAAAGCAGTTAACATTCTGAAAGCTCATGGACGATCCATGTCAGAGAGCATGTTGATAGATGGTTATGCTCTCAATTGCACAGCTGCCAGCCAACAAATGCCACGAATAATAAAGAA-GGCGAAAATTGCCTTTCTGGATTTCAGCTTACAAAAAGTTAAAATGAAATTGGGAGTTCAAGTTGTGGTTAAGGATCCTGCCCAACTGGAGGCTATCCGTCAACGTGAAGCTGATATCACAAAAGAACGTATACAAAAGATTCTTAATGCTGGTGCTAATGTTATTCTTACAACTGGTGGAATCGATGATCTATGCATGAAGTATTTTGTTGAAGTTAATGCAATGGCTGTACGACGATGCAAAAAAGTTGATTTGAAAAATATGGCAAAAGCAACTGGAGGTCAGCT-TATTGTTAGCTTAGCAGATATGGAAGGTGATGAAGTTTTCGATCCAACAAAATTAGGAAATGCAGAGGAGGTATCTCAAGAAC-GCATATGTGATGATGAATTAATTATACTGAGAGGTCCTAAAGTTCATCCATCGGCAAGTATCATTTTACGAGGTGCTAATGACTTTTATGTCGATGAAATGGAACGATCTTTACATGATGCACTTCTGGTGGTCAAACGAGTCCTGGAAAGCAAACGCATCGTACCTGGTGCTGGGGCTTGTGAAACAGCAGTCTCAATCTATCTGGAAAATTATGCTTTAACCTTAAGTTCACGTGAACAGCTAGCTATTGCTGAATTCGCTCGAGCTATGCTTTCTATTCCGAAACAGTTGGCTGTGAATGCTGGTGTCGATTCAACTGAACTAGTTGCACGTTTGCGATCTTGTCACAATTCAAGTCAAAGTAAACCTGATCAAGCTCATAACAAGTGGTGGGGATTAGACTTAAATAATCAATATGTAGCTGACTGCAAAGAAATAGGTGTTTTTGAACCACTTGTCTCTAAAATTAAAAGTTTAAAATTTGCTACTGAAGCCGCTATTACTATTCTACGAATTGATGATTTGATTAAATTAAAAGAAGAAAAACAACCTGATCACGATGGTGATGAATGTGGTTATTAACTGAATTCGATCACAGTTGATATATTTCTATCGTTTGTTGGAAGAAATATATGTGTTACATAACTTGAAAAAAAAAAAAAAAAA]
[+] EMBL CD186298 [GACTATAAGTTTTTGGCGGCTCTTGAAGTAATTTTCCAGTCATGTCGGTT AACGCTGCTAGCATGCTCACCCTCGGGGGAGAGAGGACGAGTGGCGAATCTGTTCGCAAACAAAATGTTCTCGCTGCTTGCTCAATCGCTAACATCGTTAAGACCAGCCTAGGTCCTGTCGG TCTTGATAAAATGCTGGTAGATGACGTTGGAGACGTGACAATCACCAACGATGGGGCCACTATCTTGAAATTGCTTGACGTTGAGCACCCTGCAGCAAAAATTTC TTGTTCAGCTT ]
[+] EMBL AI975084 [ AATTTTCCAGTCATGTCGGTT AACGCTGCTAGCATGCTCACCCTCGGGGGAGAGAGGACGAGTGGCGAATCTGTTCGCAAACAAAATGTTCTCGCTGCTTGCTCAATCGCTAACATCGTTAAGACCAGCCTAGGTCCTGTCGG TCTTGATAAAATGCTGGTAGATGACGTTGGAGACGTGACAATCACCAACGATGGGGCCACTATCTTGAAATTGCTTGACGTTGAGCACCCTGCAGCAAAAA TTC TTGTTCAGCTTGCACAATTACAAGATGAAGAAGTTGGGGATGGGACAACATCTGTTGTAATTCTGGCTGCTGCACTGCTCAAGAATGCAGACGAATTGATTTCTCGTTTTGTTCATCCTACCACAGTAATCAATGGTTATCGGTTGGCCTGTCGAGAAGCTTGTAAGTACATACAGGAACACATGGCATATGATGTAAATAAGCTGGGT AGGCTGGGCTAATAAATGTGGCACGAACAGCTATGTCAAGCAAGCTTATTCAATTTAGATGCCGACATGTTTTCACAAATGGCTGTGG ]
[+] EMBL AI976626 [ AATTTTCCAGTCATGTCGGTT AACGCTGCTAGCATGCTCACCCTCGGGGGAGAGAGGACGAGTGGCGAATCTGTTCGCAAACAAAATGTTCTCGCTGCTTGCTCAATCGCTAACATCGTTAAGACCAGCCTAGGTCCTGTCGG TCTTGATAAAATGCTGGTAGATGACGTTGGAGACGTGACAATCACCAACGATGGGGCCACTATCTTGAAATTGCTTGACGTTGAGCACCCTGCAGCAAAAA TTCTTTGTTCAGCTTGCACAATTACAAGATGAAGAAGTTGGGGATGGGACAACATCTGTTGTAATTCTGGCTGCTGCACTGCTCAAGAATGCAGACGAATTGATTTCTCGTTTTGTTCATCCTACCACAGTAATCAATGGTTATCGGTTGGCCTGTCGAGAAGCTTGTAAGTACATACAGGAACACATGGCATATGATGTAAATAAGCTGGGTAAGGCTGGGCTAATAAATGTGGCACGAACAGCTATGTCAAGCAAGCTTA TCAATTTAGATGCCGACATGTTT ]
[+] EMBL SMU55769 [ AGTCATGTCGGTTAAACGCTGCTAGCATGCTCACCCTCGGGGGAGAGAGGACGAGTGGCGAATCTGTTCGCAAACAAAATGTTCTCGCTGCTTGCTCATTCGCTAACTTCGTTAAGACCAGCCTAGGTCCTGTCGG TCTTGATAAAATGCTGGTAGATGACGTTGGAGACGTGACAATCACCAACGATGGGGCCACTATCTTGAAATTGCTTGACGTTGAGCACCCTGCAGCAAAAA TTC TTGTTCAGCTTGCACAATTACAAGATGAAGAAGTTGGGGATGGGACAACATCTGTTGTAATTCTGGCTGCTGCACTGCTCAAGAATGCAGACGAATTGATTTCTCGTTTTGTTCATCCTACCACAGTAATCAATGGTTATCGGTTGGCCTGTCGAGAAGCTTGTAAGTACATACAGGAACACATGGCATATGATGTAAATAAGCTGGGTAAGGCTGGGCTAATAAATGTGGCACGAACAGCTATGTCAAGCAAGCTTA TCAATTTAGATGCCGACATGTTTTCACAAATGGCTGTGGATGCACTTATGGCTGTTGAAGTCTCTGGAGGCCCCAAAGGTCCTGTTTATCCCATAAAAGCAGTTAACATTCTGAAAGCTCATGGACGATCCATGTCAGAGAGCATGTTGATAGATGGTTATGCTCTCAATTGCACAGCTGCCAGCCAACAAATGCCACGAATAATAAAGAA GGCGAAAATTGCCTTTCTGGATTTCAGCTTACAAAAAGTTAAAATGAAATTGGGAGTTCAAGTTGTGGTTAAGGATCCTGCCCAACTGGAGGCTATCCGTCAACGTGAAGCTGATATCACAAAAGAACGTATACAAAAGATTCTTAATGCTGGTGCTAATGTTATTCTTACAACTGGTGGAATCGATGATCTATGCATGAAGTATTTTGTTGAAGTTAATGCAATGGCTGTACGACGATGCAAAAAAGTTGATTTGAAAAATATGGCAAAAGCAACTGGAGGTCAGCT TATTGTTAGCTTAGCAGATATGGAAGGTGATGAAGTTTTCGATCCAACAAAATTAGGAAATGCAGAGGAGGTATCTCAAGAAC GCATATGTGATGATGAATTAATTATACTGAGAGGTCCTAAAGTTCATCCATCGGCAAGTATCATTTTACGAGGTGCTAATGACTTTTATGTCGATGAAATGGAACGATCTTTACATGATGCACTTCTGGTGGTCAAACGAGTCCTGGAAAGCAAACGCATCGTACCTGGTGCTGGGGCTTGTGAAACAGCAGTCTCAATCTATCTGGAAAATTATGCTTTAACCTTAAGTTCACGTGAACAGCTAGCTATTGCTGAATTCGCTCGAGCTATGCTTTCTATTCCGAAACAGTTGGCTGTGAATGCTGGTGTCGATTCAACTGAACTAGTTGCACGTTTGCGATCTTGTCACAATTCAAGTCAAAGTAAACCTGATCAAGCTCATAACAAGTGGTGGGGATTAGACTTAAATAATCAATATGTAGCTGACTGCAAAGAAATAGGTGTTTTTGAACCACTTGTCTCTAAAATTAAAAGTTTAAAATTTGCTACTGAAGCCGCTATTACTATTCTACGAATTGATGATTTGATTAAATTAAAAGAAGAAAAACAACCTGATCACGATGGTGATGAATGTGGTTATTAACTGAATTCGATCACAGTTGATATATTTCTATCGTTTGTTGGAAGAAATATATGTGTTACATAACTTGAAAAAAAA ]
[+] EMBL CD149795 [ GGACGAGTGGCGAATCTGTTCGCAAACAAAATGTTCTCGCTGCTTGCTCAATCGCTAACATCGTTAAGACCAGCCTAGGTCCTGTCGG TCTTGATAAAATGCTGGTAGATGACGTTGGAGACGTGACAATCACCAACGATGGGGCCACTATCTTGAAATTGCTTGACGTTGAGCACCCTGCAGCAAAAA TTC TTGTTCAGCTTGCACAATTACAAGATGAAGAAGTTGGGGATGGGACAACATCTGTTGTAATTCTGGCTGCTGCACTGCTCAAGAATGCAGACGAATTGATTTCTCGTTTTGTTCATCCTACCACAGTAATCAATGGTTATCGGTTGGCCTGTCG ]
[+] EMBL CD096015 [ CTGTTCGCAAACAAAATGTTCTCGCTGCTTGCTCAATCGCTAACATCGTTAAGACCAGCCTAGGTCCTGTCGG TCTTGATAAAATGCTGGTAGATGACGTTGGAGACGTGACAATCACCAACGATGGGGCCACTATCTTGAAATTGCTTGACGTTGAGCACCCTGCAGCAAAAA TTC TTGTTCAGCTTGCACAATTACAAGATGAAGAAGTTGGGGATGGGACAACATCTGTTGTAATTCTGGCTGCTGCACTGCTCAAGAATGCAGACGAATAGATTTCTCGTTTTGTTCATCCTACCACAGTAATCAATGGTTATCGGTTGGCCTGTCGAGAAGCTTGTAAGTACATACAGGAACACATGGCATATGATGTAAATAAGCTGGGTAAGGCTGGGCTAATAAATGTGGCACGAACAGCTATGTCAAGCAAGCTTA TCAATTTAGATGCCGACATGTTTTCACAAATGGCTGTGGATGCACTTATGGCTGTTGAAGTCTCTGGA ]
[+] EMBL CD095616 [ CTGTTCGCAAACAAAATGTTCTCGCTGCTTGCTCAATCGCTAACATCGTTAAGACCAGCCTAGGTCCTGTCGG TCTTGATAAAATGCTGGTAGATGACGTTGGAGACGTGACATTCACCAACGATGGGGCCACTATCTTGAAATTGCTTGACGTTGAGCACCCTGCAGCAAAAA TTC TTGTTCAGCTTGCACAATTACAAGATGAAGAAGTTGGGGATGGGACAACATCTGTTGTAATTCTGGCTGCTGCACTGCTCAAGAATGCAGACGAATAGATTTCTCGTTTTGTTCATCCTACCACAGTAATCAATGGTTATCGGTTGGCCTGTCGAGAAGCTTGTAAGTACATACAGGAACACATGGCATATGATGTAAATAAGCTGGGTAAGGCTGGGCTAATAAATGTGGCACGAACAGCTATGTCAAGCAAGCTTA TCAATTTAGATGCCGACATGTTTTCACAAATGGCTGTGGATGCACTTATGGCTGTTGAAGTCTCTGGAG ]
[+] EMBL CD096281 [ TGTCGGCTCTTGATAAAATGCTGGTAGATGACGTTGGAGACGTGACAATCACCAACGATGGGGCCACTATCTTGAAATTGCTTGACGTTGAGCACCCTGCAGCAAAAA TTC TTGTTCAGCTTGCACAATTACAAGATGAAGAAGTTGGGGATGGGACAACATCTGTTGTAATTCTGGCTGCTGCACTGCTCAAGAATGCAGACGAATTGATTTCTCGTTTTGTTCATCCTACCACAGTAATCAATGGTTATCGGTTGGCCTGTCGAGAAGCTTGTAAGCACATACAGGAACACATGGCATATGATGTAAATAAGCTGGGTAAGGCTGGGCTAATAAATGTGGCACGAACAGCTATGTCAAGCAAGCTTA TCAATTTAGATGCC ]
[+] EMBL CD096159 [ GTCGG TCTTGATAAAATGCTGGTAGATGACGTTGGAGACGTGACAATCACCAACGATGGGGCCACTATCTTGAAATTGCTTGACGTTGAGCACCCTGCAGCAAAAA TTC TTGTTCAGCTTGCACAATTACAAGATGAAGAAGTTGGGGATGGGACAACATCTGTTGTAATTCTGGCTGCTGCACTGCTCAAGAATGCAGACGAATTGATTTCTCGTTTTGTTCATCCTACCACAGTAATCAATGGTTATCGGTTGGCCTGTCGAGAAGCTTGTAAGTACATACAGGAACACATGGCATATGATGTAAATAAGCTGGGTAAGGCTGGGCTAATAAATGTGGCACGAACAGCTATGTCAAGCAAGCTTA TCAATTTAGATGCCGACATGTTTTCACAAATGGCTGTGGATGCACTTATGGCTGTTGAAGTCTCTGGAGGCCCCAAAGGTCCTGTTTATCCCATAAAAGCAGTTAACATTCTGAAAGCTCATGGACGATCCCTGTCAGAGAGC ]
[+] EMBL CD096232 [ GTCGG TCTTGATAAAATGCTGGTAGATGACGTTGGAGACATGACAATCACCAACGATGGGGCCACTATCTTGAAATTGCTTGACGTTGAGCACCCTGCAGCAAAAA TTC TTGTTCAGCTTGCACAATTACAAGATGAAGAAGTTGGGGATGGGACAACATCTGTTGTAATTCTGGCTGCTGCACTGCTCAAGAATGCAGACGAATTGATTTCTCGTTTTGTTCATCCTACCACAGTAATCAATGGTTATCGGTTGGCCTGTCGAGAAGCTTGTAAGTACATACAGGAACACATGGCATATGATGTAAATAAGCTGGGTAAGGCTGGGCTAATAAATGTGGCACGAACAGCTATGTCAAGCAAGCTTA TCAATTTAGATGCCGACATGTTTTCACAAATGGCTGTGGATGCACTTATGGCTGTTGAAGTCTCTGGAGGCCCCAAAGGTCCTGTTTATCCCATAAAAGCAGTTAACATTCTGAAAGCTCATGGACGATCCATGTCAGAGAGCATGTTGATAGATGGTTATGCTCTCAATTGCACAGCTGCCAGCCAACANATGCCACGAATAATANAGAAGGGCG AAATTG ]
[+] EMBL CD114678 [ CGTTGGAGACGTGACAATCACCAACGATGGGGCCACTATCTTGAAATTGCTTGACGTTGAGCACCCTGCAGCAAAAA TTC TTGTTCAGCTTGCACAATTACAAGATGAAGAAGTTGGGGATGGGACAACATCTGTTGTAATTCTGGCTGCTGCACTGCTCAAGAATGCAGACGAATTGATTTCTCGTTTTGTTCATCCTACCACAGTAATCAATGGTTATCGGTTGGCCTGTCGAGAAGCTTGTAAGTACATACAGGAACACATGGCATATGATGTAAATAAGCTGGGTAAGGCTGGGCTAATAAATGTGGCACGAACAGCTATGTCAAGCAAGCTTA TCAATTTAGATGCCGACATGTTTTCACAA ]
[-] EMBL CD114718 [ GTTGGAGACGTGACAATCACCAACGATGGGGCCACTATCTTGAAATTGCTTGACGTTGAGCACCCTGCAGCAAAAA TTC TTGTTCAGCTTGCACAATTACAAGATGAAGAAGTTGGGGATGGGACAACATCTGTTGTAATTCTGGCTGCTGCACTGCTCAAGAATGCAGACGAATTGATTTCTCGTTTTGTTCATCCTACCACAGTAATCAATGGTTATCGGTTGGCCTGTCGAGAAGCTTGTAAGTACATACAGGAACACATGGCATATGATGTAAATAAGCTGGGTAAGGCTGGGCTAATAAATGTGGCACGAACAGCTATGTCAAGCAAGCTTA TCAATTTAGATGCCGACATGTTTTCACAAA ]
[+] EMBL CD114769 [ TTACAAGATGAAGAAGTTGGGGATGGGACAACATCTGTTGTAATTCTGGCTGCTGCACTGCTCAAGAATGCAGACGAATTGATTTCTCGTTTTGTTCATCCTGCCACAGTAATCAATGGTTATCGGTTGGCCTGTCGAGAAGCTTGTAAGTACATACAGGAACACATGGCATATGATGTAAATAAGCTGGGTAAGGCTGGGCTAATAAATGTGGCACGAACAGCTATGTCAAGCAAGCTTA TCAATTTAGATGCCGACATGTTTTCACAA ]
[+] EMBL BF936238 [ GATGGGACAACATCTGTTGTAATTCTGGCTGCTGCACTGCTCAAGAATGCAGACGAATTGATTTCTCGTTTTGTTCATCCTACCACAGTAATCAATGGTTATCGGTTGGCCTGTCGAGAAGCTTGTAAGTACATACAGGAACACATGGCATATGATGTAAATAAGCTGGGTAAGGCTGGGCTAATAAATGTGGCACGAACAGCTATGTCAAGCAAGCTTA TCAATTTAGATGCCGACATGTTTTCACAAATGGCTGTGGATGCACTTATGGCTGTTGAAGTCTCTGGAGGCCCCAAAGGTCCTGTTTATCCCATAAAAGCAGTTAACATTCTGAAAGCTCATGGACGATCCATGTCAGAGAGCATGTTGATAGATGGTTATGCTCTCAATTGCACAGCTGCCAGCCAACAAATGCCACGAATAATAAAGAA GGCGAAAATTGCCTTTCTGGATTTCAGCTTACAAAAAGTTAAAATGAAATTGGGAGTTCAAGTTGTGGTTAAGGATCCTGCCCAACTGGAGGCTATCCGTCAACGTGAAGCTGATATCA ]
[+] EMBL BF936102 [ TTCTGGCTGCTGCACTGCTCAAGAATGCAGACGAATTGATTTCTCGTTTTGTTCATCCTACCACAGTAATCAATGGTTATCGGTTGGCCTGTCGAGAAGCTTGTAAGTACATACAGGAACACATGGCATATGATGTAAATAAGCTGGGTAAGGCTGGGCTAATAAATGTGGCACGAACAGCTATGTCAAGCAAGCTTA TCAATTTAGATGCCGACATGTTTTCACAAATGGCTGTGGATGCACTTATGGCTGTTGAAGTCTCTGGAGGCCCCAAAGGTCCTGTTTATCCCATAAAAGCAGTTAACATTCTGAAAGCTCATGGACGATCCATGTCAGAGAGCATGTTGATAGATGGTTATGCTCTCAATTGCACAGCTGCCAGCCAACAAATGCCACGAATAATAAAGAA GGCGAAAATTGCCTTTCTGGATTTCAGCTTACAAAAAGTTAAAATGAAATTGGGAGTTCAAGTTGTGGTTAAGGATCCTGCCCAACTGGAGGCTATCCGTCAACGTGAAGCTGATATCACAAAAGAACGTATACAAAAGAT ]
[+] EMBL CD061265 [ GTAATCAATGGTTATCGGTTGGCCTGTCGAGAAGCTTGTAAGTACATACAGGAACACATGGCATATGATGTAAATAAGCTGGGTAAGGCTGGGCTAATAAATGTGGCACGAACAGCTATGTCAAGCAAGCTTA TCAATTTAGATGCCGACATGTTTTCACAAATGGC ]
[+] EMBL CD154110 [ TCTGGAGGCCCCAAAGGTCCTGTTTATCCCATAAAAGCAGTTAACATTCTGAAAGCTCATGGACGATCCATGTCAGAGAGCACGTTGATAGATGGTTATGCTCTCAATTGCACAGCTGCCAGCCAACAAATGCCACGAATAATAAAGAA GGCGAAAATTGCCTTTCTGGATTTCAGCTTACAAAAAGTTAAAATGAAATTGGGAGTTCAAGTTGTGGTTAAGGATCCTGCCCAACTGGAGGCTATCCGTCAACGTGAAGCTGATATCACAAAAGAACGTATACAAAAGATTCTTAATGCTGGTGCTAATGTTATTCTTACAACTGGTGGAATCGATGATCTATGCATGAAGTATTTTGTTGAAGTTAATGCAATGGCTGTACGACGATGCAAAAAAGTTGATTTGAAAAATATGGCAAAAGCAACTGGAGGTCAGCT TATTGTTAGCTTAGCAGATATGGAAGGTGATGAAGTTTTCGATCCAACAAAATTAGGAAATGCAGAGGAG ]
[+] EMBL CD124029 [ CATGGACGATCCATGTCAGAGAGCATGTTGATAGATGGTTATGCTCTCAATTGCACAGCTGCCAGCCAACAAATGCCACGAATAATAAAGAA GGCGAAAATTGCCTTTCTGGATTTCAGCTTACAAAAAGTTAAAATGAAATTGGGAGTTCAAGTTGTGGTTAAGGATCCTGCCCAACTGGAGGCTATCCGTCAACGTGAAGCTGATATCACAAAAGAACGTATACAAAAGATTCTTAATGCTGGTGCTAATGTTATTCTTACAACTGGTGGAATCGATGATCTATGCATGAAGTATTTTGTTGAAGTTAATGCAATGGCTGTACGACGATGCAAAAAAGTTGATTTG AAAATATGGCAAAAGCAACTGGAGGTCAGCT TATTGTTAGCTTAGCAGATATGGAAGGTGATGAAGTTTTCGATCCAACAAAATTAGGAAATGCAGAGGAGGTA ]
[+] EMBL CD181444 [ AGAACGTATACAAAAGATTCTTAATGCTGGTGCTAATGTTATTCTTACAACTGGTGGAATCGATGATCTATGCATGAAGTATTTTGTTGAAGCTAATGCAATGGCTGTACGACGATGCAAAAAAGTTGATTTGAAAAATATGGCAAAAG ]
[+] EMBL SMAA69033 [ GAACGTATACAAAAGATTCTTAATGCTGGTGCTAATGTTATTCTTACAACTGGTGGAATCGATGATCTATGCATGAAGTATTTTGTTGAAGTTAATGCAATGGCTGTACGACGATGCAAAAAAGTTGA TTGAAAAATATGGC ATAGTCACT GA GTCAGCTATGTAGTTAGC ]
[-] EMBL CD147118 [ ATACAAAAGATTCTTAATGCTGGTGCTAATGTTATTCTTACAACTGGTGGAATCGATGATCTATGCATGAAGTATTTTGTTGAAGTTAATGCAATGGCTGTACGACGATGCAAAAAAGTTGATTTGAAAAATATGGCAAAAGCAACTGGAGGTCAGCT TATTGTTAGCTTAGCAGATATGGAAGGTGATGAAGTTTTCGATCCAACAAAATTAGGAAATGCAGAGGAGGTATCTCAAGAAC GCATATGTGATGATGAATTAATTATACTGAGAGGTCCTAAAGTTCATCCATCGGCAAGTATCATTTTACGAGGTGCTAATGACTTTTATGTCGATGAAATGGAACGATCTTTACATGATGCACTTCTGGTGGTCAAACGAGTCCTGGAAAGCAAACTCATTGTACCTGGTGCTGGGGCTTGTGAGACAGCAGTCTCAATCTATCTGGAAAATTATGCTTTAACCTTAAGTTCACGTGAACAGCTAGCTATTGCTGAATTCGCTCGAGCTATGCTTTCTATTCCGAAACAGTTGGCTGTGAATGCTGGTGTCGATTCAACTGAACTAG ]
[+] EMBL CD134029 [ TTAGCTGAGCAGATATGGAAGGTGATGAAGTTTTCGATCCAACAGAATTAGGAAATGCAGAGGAGGTATCTCAAGAAC GCATATGTGATGATGAATTAATTATACTGAGAGGTCCTAAAGTTCATCCATCGGCAAGTATCATTTTACGAGGTGCTAATGACTTTTATGTCGATGAAATGGAACGATCTTTGCATGATGCACTTCTGGTGGTCAAACGAGTCCTGGAAAGCAAACGCATCGTACCTGGTGCTGGGGCTTGTGAAACAGCAGTCTCAATCTATCTGGAAAATTATGCTTTAACCTTAAGTTCACGTGAACAGCTAGCTATTGCTGAATTCGCTCGAGCTATGCTTTCTATTCCGAAACAGTTGGCTGTGAATGCTGGTGTCGATTCAACTGAACTAGTTGCACGTTTGCGATCTTGTCACAATTCAAGTCAAAGTAAACCTGATCAAG ]
[+] EMBL CD180867 [ agcGAGGAGGTATCTCAAGAAC GCATATGTGATGATGAATTAATTATACTGAGAGGTCCTAAAGTTCATCCATCGGCAAGTATCATTTTACGAGGTGCTAATGACTTTTATGTCGATGAAATGGAACGATCTTTACA ]
[-] EMBL CD160549 [ TATCTCAAGAAC GCATATGTGATGATGAATTAATTATACTGAGAGGTCCTAAAGTTCATCCATCGGCAAGTATCATTTTACGAGGTGCTAATGACTTTTATGTCGATGAAATGGAACGATCTTTACATGATGCACTTCTGGTGGTCAAACGAGTCCTGGAAAGCAAACGCATTGTACCTGGTGCTGGGGCTTGTGAAACAGCAGTCTCAATCTATCTGGAAAATTATGCTTTAACCTTAAGTTCACGTGAACAGCTAGCTATTGCTGAATTCGCTCGAGCTATGCTTTCTATTCCGAAACAGTTGGCTGTGAATGCTGGTGTCGATTCAACTGAACTAGTTGCACGTTTGCGATCTTGTCACAATACAAGTCAAAGTAAACCTGATCAAG ]
[-] EMBL CD150050 [ ATCTC AGAACGGCATATGTGATGATGAATTAATTATACTGAGAGGTCNTAGAGTTCATCCATCGGCAAGTATCATTTTACGAGGTGCTAATGACTTTTATGTCGATGAAATGGAACGATCTTTACATGATGCACTTGTGGTGGTCAAACGAGTCCTGGAAAGCAAACGCATCGTACCTGGTGCTGGGGCTTGTAAAACAGCAGTCTCAATCTATCTGGAAAATTATGCTTTAACCTTAAGTTCACGTGAACAGCTAGCTATTGCTGAATTCGCTCGAGCTATGCTTTCTATTCCGAAACAGTTGGCTGTGAATGCTGGTGTCGATTCAAGTGAACTAGTTGCACGTTTGCGATCTTGTCACAATTCAAGCCCCAGTAAACCTGATC ]
[-] EMBL CD165746 [ CGCATTGTACCTGGTGCTGGGGCTTGTGAAACAGCAGTCTCAATCTATCTGGAAAATTATGCTTTAACCTTAAGTTCACGTGAACAGCTAGCTATTGCTGAATTCGCTCGAGCTATGCTTTCTATTCCGAAACAGTTGGCTGTGAATGGTGGTGTCGATTCAACTGAACTAGTTGCACGTTTGCGATCTTGTCACAATTCAAGTCAAAGTAAACCTGATCAAGCTCATTACAAGTGGTGGGGATTAGACTTAAATAATCAATATGTAGCTGACTGCAAAGAAATAGGTGTTTTTGAACCACTTGTCTCTAAAATTAAAAGTTTAAAAT ]
[-] EMBL AI395536 [ TGATCAAGCTCATACCAAGTGGTGGGGATTGGACTTAAATAATCAATATGTAGCTGACTGCAAAGAAATAGGTGTTTTTGAACCACTTGTCTCTAAAATTAAAAGTTTAAAATTTGCTACTGAAGCCGCTATTACTATTCTACGAATTGATGATTTGATTAAATTAAAAGAAGAAAAACAACCTGATCACGATGGTGATGAATGTGGTTATTAACTGAATTCGATCACAGTTGATATATTTCTATCGTTTGTTAGAAGAAATATATGTGTTACATAACTTGAAAAAAAAAAAAAAAAA]
[-] EMBL AI395190 [ TGGGGATTTGACTTAAATAATCAATATGTAGCTGACTGCAAAGAAATAGGTGTTTTTGAACCACTTGTCTCTAAAATTAAAAGTTTAAAATTTGCTACTGAAGCCGCTATTACTATTCTACGAATTGATGATTTGATTAAATTAAAAGAAGAAAAACAACCTGATCACGATGGTGATGAATGTGGTTATTAACTGAATTCGATCACAGTTGATATATTTCTATCGTTTGTTGGAAGAAATATATGTGTTACATAACTTGAAAAAAAAAAAAAAAAA]
[+] EMBL AA958324 [ TATGTAGCTGACTGCAAAGAAATAGGTGTTTTTGAACCACTTGTCTCTAAAATTAAAAGTTTAAAATTTGCTACTGAAGCCGCTATTACTATTCTACGAATTGATGATTTGATTAAATTAAAAGAAGAAAAACAACCTGATCACGATGGTGATGAATGTGGTTATTAACTGAATTCGATCACAGTTGATATATTTCTATCGTTTGTTGGAAGAAATATATGGGTT ]
consensusID : consensus_11103#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 697 fasta sequence
[CCAGGCACGTTGTTGGCCTGTCGAGAAGCTTGTAAGTACATACAGGAACACATGGCATATGATGTAAATAAGCTGGGTAAGGCTGGGCTAATAAATGTGGCACGAACAGCTATGTCAAGCAAGCTTATCAATTTAGATGCCGACATGTTTTCACAAATGGCTGTGGATGCACTTATGGCTGTTGAAGTCTCTGGAGGCCCCAAAGGTCCTGTTTATCCCATAAAAGCAGTTAACATTCTGAAAGCTCATGGACGATCCATGTCAGAGAGCATGTTGATAGATGGTTATGCTCTCAATTGCACAGCTGCCAGCCAACAAATGCCACGAGTAATAAAGAAGGCGAAAATTGCCTTTCTGGATTTCAGCTTACAAAAAGTTAAAAAGAAATTGGGAGTTCAAGTTGTGGTTAAGGATCCTGCCCAACTGGAGGCTATCCGTCAACGTGAAGCTGATATCACAAAAGAACGTATACAAAAGATTCTTAATGCTGGTGCTAATGTTATTCTTACAACTGGTGGAATCGATGATCTATGCATGAAGTATTTTGTTGAAGTTAATGCAATGGCTGTACGACGATGCAAAAAAGTCCCCCCCCCCCATATGGCAAAAGCAACTGGAGGTCAGCTTATTGTTAGCTTAGCAGATATGGAAGGTGATGAAGTTTTCGATCCAACAAAATTAGGAAATGCAGAGGAGG]
[+] EMBL CD115832 [CCAGGCACGTTGTTGGCCTGTCGAGAAGCTTGTAAGTACATACAGGAACACATGGCATATGATGTAAATAAGCTGGGTAAGGCTGGGCTAATAAATGTGGCACGAACAGCTATGTCAAGCAAGCTTATCAATTTAGATGCCGACATGTTTTCACAAATGGCTGTGGATGCACTTATGGCTGTTGAAGTCTCTGGAGGCCCCAAAGGTCCTGTTTATCCCATAAAAGCAGTTAACATTCTGAAAGCTCATGGACGATCCATGTCAGAGAGCATGTTGATAGATGGTTATGCTCTCAATTGCACAGCTGCCAGCCAACAAATGCCACGAGTAATAAAGAAGGCGAAAATTGCCTTTCTGGATTTCAGCTTACAAAAAGTTAAAAAGAAATTGGGAGTTCAAGTTGTGGTTAAGGATCCTGCCCAACTGGAGGCTATCCGTCAACGTGAAGCTGAT ]
[-] EMBL CD115618 [ AGCATGTTGATAGATGGTTATGCTCTCAATTGCACAGGTGCCAGCCAACAAATGCCACGAATAATAAAGAAGGCGAAAATTGCCTTTCTGGATTTCAGCTTACAAAAAGTTAAAATGAAATTGGGAGTTCAAGTTGTGGTTAAGGATCCTGCCCAACTGGAGGCTATCCGTCAACGTGAAGCTGATATCACAAAAGAACGTATACAAAAGATTCTTAATGCTGGTGCTAATGTTATTCTTACAACTGGTGGAATCGATGATCTATGCATGAAGTATTTTGTTGAAGTTAATGCAATGGCTGTACGACGATGCAAAAAAGTCCCCCCCCCCCATATGGCAAAAGCAACTGGAGGTCAGCTTATTGTTAGCTTAGCAGATATGGAAGGTGATGAAGTTTTCGATCCAACAAAATTAGGAAATGCAGAGGAGG]
consensusID : consensus_11103#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 163 fasta sequence
[CAGCAATAGCTAGCTGTTCACGTGAACAGCTATATTGCTGAATTCGCTCGAGCTATGCTTTCTATTCCGAAACAGTTGGCTGTGAATGCTGGTGTCGATTCAACTGAACTAGTTGCACGTTTGCGATCTTGTCACAATTCAAGTCAAAGTAAACCTGATCAAG]
[+] EMBL CD126672 [CAGCAATAGCTAGCTGTTCACGTGAACAGCTATATTGCTGAATTCGCTCGAGCTATGCTTTCTATTCCGAAACAGTTGGCTGTGAATGCTGGTGTCGATTCAACTGAACTAGTTGCACGTTTGCGATCTTGTCACAATTCAAGTCAAAGTAAACCTGATCAAG]
consensusID : consensus_11103#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 122 fasta sequence
[GGTAATAGCCTGGTGAGCAGATATGGAAGGTGATGAAGTTTTCGATCCAACAAAATTAGGAAATGCAGAGGAGGTATCTCAAGAACGCATATGTGATGATGAATTAATTATACTGAATGGTC]
[+] EMBL CD166869 [GGTAATAGCCTGGTGAGCAGATATGGAAGGTGATGAAGTTTTCGATCCAACAAAATTAGGAAATGCAGAGGAGGTATCTCAAGAACGCATATGTGATGATGAATTAATTATACTGAATGGTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11103#1 ------------------------------------------------------------
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 GACTATAAGTTTTTGGCGGCTCTTGAAGTAATTTTCCAGTCATGTCGGTTAACGCTGCTA 60
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 ------------------------------------------------------------
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 GCATGCTCACCCTCGGGGGAGAGAGGACGAGTGGCGAATCTGTTCGCAAACAAAATGTTC 120
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 ------------------------------------------------------------
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 TCGCTGCTTGCTCAATCGCTAACATCGTTAAGACCAGCCTAGGTCCTGTCGGTCTTGATA 180
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 ------------------------------------------------------------
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 AAATGCTGGTAGATGACGTTGGAGACGTGACAATCACCAACGATGGGGCCACTATCTTGA 240
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 ------------------------------------------------------------
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 AATTGCTTGACGTTGAGCACCCTGCAGCAAAAATTCTTGTTCAGCTTGCACAATTACAAG 300
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 ------------------------------------------------------------
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 ATGAAGAAGTTGGGGATGGGACAACATCTGTTGTAATTCTGGCTGCTGCACTGCTCAAGA 360
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 -----------------------------------------------CCAGGCACGTTGT 13
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 ATGCAGACGAATTGATTTCTCGTTTTGTTCATCCTACCACAGTAATCAATGGTTATCGGT 420
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 TGGCCTGTCGAGAAGCTTGTAAGTACATACAGGAACACAT-G--GCATATGATGTAAATA 70
consensus_11103#3 ------GGTAATAGCCTGGTGAGCAGATATGGAAGGTGAT-GAAGTTTTCGATCCAACAA 53
consensus_11103#0 TGGCCTGTCGAGAAGCTTGTAAGTACATACAGGAACACAT-G--GCATATGATGTAAATA 477
consensus_11103#2 -----CAGCAATAGCTAGCTGTTCACGTGAACAGCTATATTGCTGAATTCGCTCGAGCTA 55
* * * * * ** * * * * * * *
consensus_11103#1 AGCTGGGTAAGGCTGGGCTAATAAATGTGGCACGAACAGCTATGTCAAG-CAAGCTTATC 129
consensus_11103#3 AATTAGGAAATGCAGAGG----AGGTATCTCAAGAACGCATATGTGATGATGAATTAATT 109
consensus_11103#0 AGCTGGGTAAGGCTGGGCTAATAAATGTGGCACGAACAGCTATGTCAAG-CAAGCTTATC 536
consensus_11103#2 TGCTTTCTATTCCGAAAC-----AGTTGGCTGTGAATGCTGGTGTCGAT-TCAACTGAAC 109
* * * * *** *** * * *
consensus_11103#1 AATTTAGATGCCGACATGTTTTCACAAATGGCTGTGGATGCACTTATGGCTGTTGAAGTC 189
consensus_11103#3 ATACTGAATGGTC----------------------------------------------- 122
consensus_11103#0 AATTTAGATGCCGACATGTTTTCACAAATGGCTGTGGATGCACTTATGGCTGTTGAAGTC 596
consensus_11103#2 TAGTTGCACGTTTGCGATCTTGTCACAATTCAAGTCAAAGTAAACCTGATCAAG------ 163
* * *
consensus_11103#1 TCTGGAGGCCCCAAAGGTCCTGTTTATCCCATAAAAGCAGTTAACATTCTGAAAGCTCAT 249
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 TCTGGAGGCCCCAAAGGTCCTGTTTATCCCATAAAAGCAGTTAACATTCTGAAAGCTCAT 656
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 GGACGATCCATGTCAGAGAGCATGTTGATAGATGGTTATGCTCTCAATTGCACAGCTGCC 309
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 GGACGATCCATGTCAGAGAGCATGTTGATAGATGGTTATGCTCTCAATTGCACAGCTGCC 716
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 AGCCAACAAATGCCACGAGTAATAAAGAAGGCGAAAATTGCCTTTCTGGATTTCAGCTTA 369
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 AGCCAACAAATGCCACGAATAATAAAGAAGGCGAAAATTGCCTTTCTGGATTTCAGCTTA 776
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 CAAAAAGTTAAAAAGAAATTGGGAGTTCAAGTTGTGGTTAAGGATCCTGCCCAACTGGAG 429
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 CAAAAAGTTAAAATGAAATTGGGAGTTCAAGTTGTGGTTAAGGATCCTGCCCAACTGGAG 836
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 GCTATCCGTCAACGTGAAGCTGATATCACAAAAGAACGTATACAAAAGATTCTTAATGCT 489
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 GCTATCCGTCAACGTGAAGCTGATATCACAAAAGAACGTATACAAAAGATTCTTAATGCT 896
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 GGTGCTAATGTTATTCTTACAACTGGTGGAATCGATGATCTATGCATGAAGTATTTTGTT 549
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 GGTGCTAATGTTATTCTTACAACTGGTGGAATCGATGATCTATGCATGAAGTATTTTGTT 956
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 GAAGTTAATGCAATGGCTGTACGACGATGCAAAAAAGTCCCCCCCCCCCATATGGCAAAA 609
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 GAAGTTAATGCAATGGCTGTACGACGATGCAAAAAAGTTGATTTGAAAAATATGGCAAAA 1016
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 GCAACTGGAGGTCAGCTTATTGTTAGCTTAGCAGATATGGAAGGTGATGAAGTTTTCGAT 669
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 GCAACTGGAGGTCAGCTTATTGTTAGCTTAGCAGATATGGAAGGTGATGAAGTTTTCGAT 1076
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 CCAACAAAATTAGGAAATGCAGAGGAGG-------------------------------- 697
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 CCAACAAAATTAGGAAATGCAGAGGAGGTATCTCAAGAACGCATATGTGATGATGAATTA 1136
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 ------------------------------------------------------------
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 ATTATACTGAGAGGTCCTAAAGTTCATCCATCGGCAAGTATCATTTTACGAGGTGCTAAT 1196
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 ------------------------------------------------------------
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 GACTTTTATGTCGATGAAATGGAACGATCTTTACATGATGCACTTCTGGTGGTCAAACGA 1256
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 ------------------------------------------------------------
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 GTCCTGGAAAGCAAACGCATCGTACCTGGTGCTGGGGCTTGTGAAACAGCAGTCTCAATC 1316
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 ------------------------------------------------------------
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 TATCTGGAAAATTATGCTTTAACCTTAAGTTCACGTGAACAGCTAGCTATTGCTGAATTC 1376
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 ------------------------------------------------------------
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 GCTCGAGCTATGCTTTCTATTCCGAAACAGTTGGCTGTGAATGCTGGTGTCGATTCAACT 1436
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 ------------------------------------------------------------
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 GAACTAGTTGCACGTTTGCGATCTTGTCACAATTCAAGTCAAAGTAAACCTGATCAAGCT 1496
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 ------------------------------------------------------------
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 CATAACAAGTGGTGGGGATTAGACTTAAATAATCAATATGTAGCTGACTGCAAAGAAATA 1556
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 ------------------------------------------------------------
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 GGTGTTTTTGAACCACTTGTCTCTAAAATTAAAAGTTTAAAATTTGCTACTGAAGCCGCT 1616
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 ------------------------------------------------------------
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 ATTACTATTCTACGAATTGATGATTTGATTAAATTAAAAGAAGAAAAACAACCTGATCAC 1676
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 ------------------------------------------------------------
consensus_11103#3 ------------------------------------------------------------
consensus_11103#0 GATGGTGATGAATGTGGTTATTAACTGAATTCGATCACAGTTGATATATTTCTATCGTTT 1736
consensus_11103#2 ------------------------------------------------------------
consensus_11103#1 ------------------------------------------------
consensus_11103#3 ------------------------------------------------
consensus_11103#0 GTTGGAAGAAATATATGTGTTACATAACTTGAAAAAAAAAAAAAAAAA 1784
consensus_11103#2 ------------------------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||