|
These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11109#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 914 fasta sequence
[ATTTGAATGTTGTATTTTAAAATCACCCGCTTTCTTATGAGTCAGAAGGAAGATCAGAATGATAACAAACAATCACGCCCAAAAGGTACAGATTCTGGACGCTCAAGCTCGACAAACTTGCAGTTACATTCGTCATATTCTCTTAACGACAGGGTTGATCGCGAATACCGTCGAGAGAGAGGTCGCCGAAGTAGGAGTCGCTCAGGTTCATTGACTTCTAGGTCACAGAGACCAATAACTAGCGGGTTTTTGACGTCGAACAAGGATATTGATAATGAAGAAGAATCAATCAAGAAAAAGTTAGAGAAAAAGCTTCGTGAGAAAGAAGAATCATATCAGAAGAGATTAAAACAGTGGGAAATTCGTGAAAGAAAAAAGGCCAATGAATATGAACATGAGAGAGATCATGAAAGGAAACGACAACGTGAATTGCAGATCGAAGCTCAACGGCTAAAAGAG-TTTTTTGAAGATTATGATGACAATGTGGAAGATCCTAAATATTATAGAGGGAGTGCCCTTCATCAGCGTTTGAAAGATCGTGAAATTGAAGAAGCGGCTGATGAACGTGATCGACAAAAGGAAATTGAACAACTTGAGACAGCTCGCCGAAAGCTAATTGAAGAGGGTGATCCAAATGCAGAATCCATTATATTTCAAATGGAACAAAAAATGCAGGAGCATCTCAGAAGATGCTTACTGGTCAATGGTGATATGTCCATCGAACCAGATGATAACCAATGTCCTGAACCGGTTAGTGAGAATTTGCCGAGCGCTGAAGATGAGTCTAAAAACCCCGAGTGTGCGGTTAAGTCACTCGAAACCAATAATTTATCACCTGCATGCAATGGCGTTGCCTCTGAGTTCGAACCCGCTGCTCCTGAAGAGACGACTATCAGTTTACTGAAGGATGGTTC]
[-] EMBL CD199637 [ATTTGAATGTTGTATTTTAAAATCACCCGCTTTCTTATGAGTCAGAAGGAAGATCAGAATGATAACAAACAATCACGCCCAAAAGGTACAGATTCTGGACGCTCAAGCTCGACAAACTTGCAGTTACATTCGTCATATTCTCTTAACGACAGGGTTGATCGCGAATACCGTCGAGAGAGAGGTCGCCGAAGTAGGAGTCGCTCAGGTTCATTGACTTCTAGGTCACAGAGACCAATAACTAGCGGGTTTTTGACGTCGAACAAGGATATTGATAATGAAGAAGAATCAATCAAGAAAAAGTTAGAGAAAAAGCTTCGTGAGAAAGAAGAATCATATCAGAAG ]
[-] EMBL CD199804 [ TTTCTTATGAGTCAGAAGGAAGATCAGAATGATAACAAACAATCACGCCCAAAAGGTACAGATTCTGGACGCTCAAGCTCGACAAACTTGCAGTTACATTCGTCATATTCTCTTAACGACAGGGTTGATCGCGAATACCGTCGAGAGAGAGGTCGCCGAAGTAGGAGTCGCTCAGGTTCATTGACTTCTAGGTCACAGAGACCAATAACTAGCGGGTTTTTGACGTCGAACAAGGATATTGATAATGAAGAAGAATCAATCAAGAAAAAGTTAGAGAAAAAGCTTCGTGAGAAAGAAGAATCATATCAGAAG ]
[-] EMBL CD059318 [ CATTGACTTCTAGGTCACAGAGACCAATAACTAGCGGGTTTTTGACGTCGAACAAGGATATTGATAATGAAGAAGAATCAATCAAGAAAAAGTTAGAGAAAAAGCTTCGTGAGAAAGAAGAATCATATCAGAAGAGATTAAAACAGTGGGAAATTCGTGAAAGAAAAAAGGCCAATGAATATGAACATGAGAGAGATCATGAAAGGAAACGACAACGTGAATTGCAGATCGAAGCTCAACGGCTAAAAGAG TTTTTTGAAGATTATGATGACAATGTGGAAGATCCTAAATATTATAGAGGGAGTGCCCTTCATCAGCGTTTGAAAGATCGTGAAATTGAAGAAGCGGCTGATGAACGTGATCGACAAAAGGAA ]
[+] EMBL CD059267 [ ACTTCTAGGTCACAGAGACCAATAACTAGCGGGTTTTTGACGTCGAACAAGGATATTGATAATGAAGAAGAATCAATCAAGAAAAAGTTAGAGAAAAAGCTTCGTGAGAAAGAAGAATCATATCAGAAGAGATTAAAACAGTGGGAAATTCGTGAAAGAAAAAAGGCCAATGAATATGAACATGAGAGAGATCATGAAAGGAAACGACAACGTGAATTGCAGATCGAAGCTCAACGGCTAAAAGAG TTTTTTGAAGATTATGATGACAATGTGGAAGATCCTAAATATTATAGAGGGAGTGCCCTTCATCAGCGTTTGAAAGATCGTGAAATTGAAGAAGCGGCTGATGAACGTGATCGACAAAAGGA ]
[-] EMBL CD059205 [ CTTCTAGGTCACAGAGACCAATAACTAGCGGGTTTTTGACGTCGAACAAGGATATTGATAATGAAGAAGAATCAATCAAGAAAAAGTTAGAGAAAAAGCTTCGTGAGAAAGAAGAATCATATCAGAAGAGATTAAAACAGTGGGAAATTCGTGAAAGAAAGAAGGCCAATGAATATGAACATGGGAGAGATCATGAAAGGAAACGACAACGTGAATTGCAGATCGAAGCTCAACGGCTAAAAGAG TTTTTTGAAGATTATGATGACAGTGTGGAAGATCCTAAATATTATAGAGGGAGTGCCCTTCATCAGCGTTTGAAAGATCGTGAAATTGAAGAAGCGGCTGATGAACGTGATCGACAAAAGGAA ]
[-] EMBL CD059211 [ CTTCTAGGTCACAGAGACCAATAACTAGCGGGTTTTTGACGTCGAACAAGGATATTGATAATGAAGAAGAATCAATCAAGAAAAAGTTAGAGAAAAAGCTTCGTGAGAAAGAAGAATCATATCAGAAGAGATTAAAACAGTGGGAAATTCGTGAAAGAAAAAAGGCCAATGAATATGAACATGAGAGAGATCATGAAAGGAAACGACAACGTGAATTGCAGATCGAAGCTCAACGGCTAAAAGAGTTTTTTTGAAGATTATGATGACAATGTGGAAGATCCTAAATATTATAGAGGGAGTGCCCTTCATCAGCGTTTGAAAGATCGTGAAATTGAAGAAGCGGCTGATGAACGTGATCGACAAAAGGAA ]
[-] EMBL CD059983 [ CTTCTAGGTCACAGAGACCAATAACTAGCGGGTTTTTGACGTCGAACAAGGATATTGATAATGAAGAAGAATCAATCAAGAAAAAGTTAGAGAAAAAGCTTCGTGAGAAAGAAGAATCATATCAGAAGAGATTAAAACAGTGGGAAATTCGTGAAAGAAAAAAGGCCAATGAATATGAACATGAGAGAGATCATGAAAGGAAACGACAACGTGAATTGCAGATCGAAGCTCAACGGCTAAAAGAG TTTTTTGAAGATTATGATGACAATGTGGAAGATCCTAAATATTATAGAGGGAGTGCCCTTCATCAGCGTTTGAAAGATCGTGAAATTGAAGAAGCGGCTGATGAACGTGATCGACAAAAGGAA ]
[+] EMBL CD077493 [ GGATATTGATAATGAAGAAGAATCAATCAAGAAAAAGTTAGAGAAAAAGCTTCGTGAGAAAGAAGAATCATATCAGAAGAGATTAAAACAGTGGGAAATTCGTGAAAGAAAAAAGGCCAATGAATATGAACATGAGAGAGATCATGAAAGGAAACGACAACGTGAATTGCAGATCGAAGCTCAACGGCTAAAAGAG TTTTTTGAAGATTATGATGACAATGTGGAAGATCCTAAATATTATAGAGGGAGTGCCCTTCATCAGCGTTTGAAAGATCGTGAAATT ]
[+] EMBL CD154308 [ TGATAATGAAGAAGAATCAACCAAGAAAAAGTTAGAGAAAAAGCTTCGTGAGAAAGAAGAATCATATCAGAAGAGATTAAAACAGTGGGAAATTCGTGAAAGAAAAAAGGCCAATGAATATGAACATGAGAGAGATCATGAAAGGAAACGACAACGTGAATTGCAGATCGAAGCTCAACGGCTAAAAGAG TTTTTTGAAGATTATGATGACAATGTGGAAGATCCTAAATATTATAGAGGGAGTGCCCTTCATCAGCGTTTGAAAGATCGTGAAATTGAAGAAGCGGCTGATGAACGTGATCGACAAAAGGAAATTGAACAACTTGAGACAGCTCGCCGAAAGCTAACTGAAGAGGGTGATCCAAATGCAGAATCCATTATATTTCAAATGGAACAAAAAATGCAGGAGCATCTCAGAAGATGCTTACTGGTCAATGGTGATATGTCCATCGAACCAG ]
[+] EMBL CD158065 [ TAATGAAGAAGAATTAATCAAGGAAAAGTTAGAGAAAAAGCTTCGTGAGAAAGAAGAATCATATCAGAAGAGATTAAAACAGTGGGAAATTCGTGAAAGAAAAAAGGCCAATGAATATGAACATGAGAGAGATCATGAAAGGAAACGACAACGTGAATTGCAGATCGAAGCCCAACGGCTAAAAGAG TTTTTTGAAGATTATGATGACAATGTGGAAGATCCTAAATATTATAGAGGGAGTGCCCTTCATCAGCGTTTGAAAGATCGTGATATTGAAGAAGCGGCTGATGAACGTGATCG ]
[+] EMBL CD135649 [ ATTGCAGATCGAAGCTCAACGGCTAAAAGAG TTTTTTGAAGATTATGATGACAATGTGGAAGATCCTAAATATTATAGAGGGAGTGCCCTTCATCAGCGTTTGAAAGATCGTGACTTTGAAGAAGCGGCTGATGAACGTGATCGACAAAAGGAAATTGAACAACTTGAGACAGCTCGCCGAAAGCTAATTGAAGAGGGTGATCCAAATGCAGAATCCATTATATTTCAAATGGAACAAAAAATGCAGGAGCATCACAGAAGATGCTTACTGGTCAATGGTGATATGTCCATCGAACCAG ]
[-] EMBL CD161430 [ AAAGATCGTGAAATTGAAGAAGCGGCTGATGAACGTGATCGACAAAAGGAAATTGAACAACTTGAGACAGCTCGCCGAAAGCTAATTGAAGAGGGTGATCCAAATGCAGAATCCATTATATTTC AATGGAACAAAAAATGCAGGAGCATCTCAGAAGATGCTTACTGGTCAATGGTGATATGTCCATCGAACCAGATGATAACCAATGTCCTGAACCGGTTAGTGAGAATTTGCCGAGCGCTGAAGATGAGTCTAAAAACCCCGAGTGTGCGGTTAAGTCACTCGAAACCAATAATTTATCACCTGCATGCAATGGCGTTGCCTCTGAGTTCGAACCCGCTGCTCCTGAAGAGACGACTA ]
[+] EMBL CD078166 [ CGAAAGCTAATTGAAGAGGGTGATCCAAATGCAGAATCCATTATATTTCAAATGGAACAAAAAATGCAGGAGCATCTCAGAAGATGCTTACTGGTCAATGGTGATATGTCCATCGAACCAGATGATAACCAATGTCCTGAACCGGTTAGTGAGAATTTGCCGAGCGCTGAAGATGAGTCTAAAAACCCCGAGTGTGCGGTTAAGTCACTCGAAACCAATAATTTATCACCTGCATGCANTGGCGTTGCCTCTGAGTTCGAACCCGCTGCTCCTGAAGAGACGACTATCAGTTTACTGAAGGATGGTTC]
consensusID : consensus_11109#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 794 fasta sequence
[GGGAATCGATAGCCTCTTAATGAAGAAGAATCAATCAAGAAAAGTTAGAGAAAAAGCTTCGTGAGAAAGAAGAATCATATCAGAAGAGATTAAAACAGTGGGAAATTCGTGAAAGAAAAAAGGCCAATGAATATGAACATGAGAGAGATCATGAAAGGAAACGACAACGTGAATTGCAGATCGAAGCTCAACGGCTAAAAGAGTTTTTTGAAGATTATGATGACAATGTGGAAGATCCTAAATATTATAGAGGGAGTGCCCTTCATCAGCGTTTGAAAGATCGTGAAATTGAAGAAGCGGCTGATGAACGTGATCGACAAAAGGAAATTGAACAACTTGAGACAGCTCGCCGAAAGCTAATTGAAGAGGGTGATCCAAATGCAGAATCCATTATATTTCAAATGGAAC-AAAAAATGCAGGAGCATCTCAGAAGATGCTTACTGGTCAATGGTGATATGTCCATCG-AACCAG-ATGATAACCAATGTCCTGAACCGGTTAGTGAGAATTTGCCGAGCGCTGAAGATGA-GGTAAGTTACAGCTCTA-TTGTAATATGTGCTATAGTGTGAATATCATCAGCTAGTTCTTTGTTCAAATCCATATGCTAAGTCATTTGTTTATCACATAATTAGAGTTCTGTTTACACTTCATTTTTCTCGTAACATTGTATGTTCTCTTTTATAGCAGTAGTCTAAACAAAAACAAGCTTTACAAACTGC--GCAAAGCAATTCATTATTGTGGTTCAGCTTTCACGGATTTTGAACAATATTCTAAATCTAAAAAGCCCGAGTGTGCGG]
[+] EMBL CD137063 [GGGAATCGATAGCCTCTTAATGAAGAAGAATCAATCAAGAAAAGTTAGAGAAAAAGCTTCGTGAGAAAGAAGAATCATATCAGAAGAGATTAAAACAGTGGGAAATTCGTGAAAGAAAAAAGGCCAATGAATATGAACATGAGAGAGATCATGAAAGGAAACGACAACGTGAATTGCAGATCGAAGCTCAACGGCTAAAAGAGTTTTTTGAAGATTATGATGACAATGTGGAAGATCCTAAATATTATAGAGGGAGTGCCCTTCATCAGCGTTTGAAAGATCGTGAAATTGAAGAAGCGGCTGATGAACGTGATCGACAAAAGGAAATTGAACAACTTGAGACAGCTCGCCGAAAGCTAATTGAAGAGGGTGATCCAAATGCAGAATCCATTATATTTCAAATGGAAC AAAAAATGCAGGAGCATCTCAGAAGATGCTTACTGGTCAATGGTGATATGTCCATCG AACCAG A ]
[+] EMBL CD181350 [ AGAGTTTTTTGAAGATTATGATGACAATGTGGAAGATCCTAAATATTATAGAGGGAGTGCCCTTCATCAGCGTTTGAAAGATCGTGAAATTGAAGAAGCGGCTGATGAACGTGATCGACAAAAGGAAGTTGAACAACTTGAGACAGCTCGCCGAAAGCTAATTGAAGAGGGTGATCCAAATGCAGAATCCATTATATTTCAAATGGAAC AAAAAATGCAGGAGCATCTCAGAAGATGCTTACTGGTCAATGGTGATATGTCCATCG AACCAGNATGAT ACCAATGTCCTGAACCGGTTAGTGAGAATTCGCCGAGCGCTGAAGATGANGGTAAG TACAGCTCTACNTGT ATACGTGCTATAng ]
[+] EMBL CD181684 [ AGAGGGTGATCCAAATGCAGAATCCATTATATTTCAAATGGAACAAAAAAATGCAGGAGCATCTCAGAAGATGCTTACTGGTCAATGGTGATATGTCCATCG AACCAG GTGATAACCAATGTCCTGAACCGGTTAGTGAGAATTTGCCGAGCGCTGAAGATGA GGTAAGTTACAGCTCTA TTGTAATATGTGCTATAGTGTGAATATCATCAGCTAGTTCTTTGTTCAAATCCATATGCTAAGTCATTTGTTTATCACATAATTAGAGTTCTGTTTACACTTCATTTTTCTCGTAACATTGTATGCTCTCTTTTATAGCAGTAGTCTAAACAAAAACAAGCTTTACAAACTGCNNGC AAGC ATTCA ]
[+] EMBL CD160299 [ GGTGATCCAAATGCAGAATCCATTATATTTCAAATGGAAC AAAAAATGCAGGAGCATCTCAGAAGATGCTTACTGGTCAATGGTGATATGTCCATCG AACCAG ATGATAACCAATGTCCTGAACCGGTTAGTGAGAATTTGCCGAGCGCTGAAGATGA GGTAAGTTACAGCTCTA TTGTAATATGTGCTATAGTGTGAATATCATCAGCTAGTTCTTTGTTCAAATCCATATGCTAAGTCATTTGTTTATCACATAATTAGAGTTCTGTTTACACTTCATTTTTCTCGTAACATTGTATGTTCTCTTTTAAAGCAGTAGTCTAAACAAAAACAAGCTTTACAAACTGC GCAAAGCAATTCATTATTGTGGTTCAGCTTTCACGGATTTTGAACAATATTCTAAATCTAAAAAGCCCGAGTGTGCGG]
[+] EMBL CD160331 [ GGTGATCCAAATGCAGAATCCATTATATTTCAAATGGAAC AAAAAATGCAGGAGCATCTCAGAAGATGCTTACTGGTCAATGGTGATATGTCCATCG AACCAG ATGATAACCAATGTCCTGAACCGGTTAGTGAGAATTTGCCGAGCGCTGAAGATGA GGTAAGTTACAGCTCTA TTGTAATATGTGCTATAGTGTGAATATCATCAGCTAGTTCTTTGTTCAAATCCATATGCTAAGTCATTTGTTTATCACATAATTAGAGTTCTGTTTACACTTCATTTTTCTCGTAACATTGTATGTTCTCTTTTATAGCAGTAGTCTAAACAAAAACAAGCTTTACAAACTGC GCAAAGCAATTCATTATTGTGGTTCAGCTTTCACGGATTTTGAACAATATTCTAAATCTATAAA CCCG ]
[+] EMBL CD160059 [ GGTGATCCAAATGCAGAATCCATTATATTTCAGATGGAAC AAAAAATGCAGGAGCATCTCAGAAGATGCTTACTGGTCAATGGTGATATGTCCATCGTAACCAG ATGATAACCAATGTCCTGAACCGGTTAGTGAGAATTTGCCGAGCGCTGAAGATCACGGTAAGTTACAGCTCTA TTGTAATATGTGCTATAGTGTGAATATCATCAGCTAGTTCTTTGTTCca ]
[+] EMBL CD181659 [ agaaGCTGAAGATGA GGTAAGTTACAGCTCTA TTGTAATATGTGCTATAGTGTGAATATCATCAGCTAGTTCTTTGTTCAAATCCATATGCTAAGTCATTTGTTTATCACATAATTAGAGTTCTGTTTACACTTCATTTTTCTCGTAACATTGTATGTTCTCTTTTATAGCAGTAGTCTAAACAAAAACAAGCTTTACAAACTGC GCAAAGCAATTCA ]
[+] EMBL CD181397 [ CAGCTCTA TTGTAATATGTGCTACAGTGTGAATATCATCAGCTAGTTCTTTGTTCAAATCCATATGCTAAGTCATTTGTTTATCACATAATTAGAGTTCTGTTTACACTTCATTTTTCTCGTAACATTGTATGTTCTTTTTTATAGCAGTAGTCTAAACAAAAACAAGC TTACAAACTGC GCAAAGCAATTCA ]
[-] EMBL CD181382 [ AGCTCTA TTGTAATATGTGCTATAGTGTGAATATCATCAGCTAGTTCTTTGTTCAAATCCATATGCTAAGTCATTTGTTTATCACATAATTAGAGTTCTGTTTACACTTCATTTTTCTCGTAACATTGTATGTTCTCTTTTATAGCAGTAGTCTAAACAAAAACAAGCTTTACAAACTGC GCAAAGCAATTCAT ]
[-] EMBL CD181735 [ AGCTCTA TTGTAACATGTGCTATAGTGTGAATATCATCAGCTAGTTCTTTGTTCAAATCCATATGCTAAGTCATTTGTTTATCACATAATTAGAGTTCTGTTTACACTTCATTTTTCTCGTAACATTGTATGCTCTCTTTTATAGCAGTAGTCTAAACAAAAACAAGCTTTACAAACTGC GCAAAGCAATTCAT ]
consensusID : consensus_11109#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 574 fasta sequence
[TTCACGGATTTGAACAATATCTAAAGTAATGTTTTGAATTTAAAGTTCAAAACAGTCCTTAGCGTATAATTGCTACACACATGGAGTTTTATGTTATTTGATGACATACTGTTTCCAAATGATGTGTTATACTACTAAACTCTATTCGCCGAGGAATCTTCATGATACAACAAATAAGTCTTCAGTTATTGAAGTGGTCAGTTTTATTATCTTACTGATCTACTAGTAATCTTATTCGTTATCCTATAAAATGGGTAGTTCACAAAAATATAAGACAGTACTTGGAACATTAATCTAAAGGGTCTTTTCCATTTAACTAATGTTTTCCAGTACGATTTCAAGTGTTTTGCTAGCTAGGTTTGTGATTTGTGTGATCAGTATATTGTGATTCTGTTTTAGTCTAAAAACCCCGAGTGTGCGGTTAAGTCACTCGAAACCAATAATTTATCACCTGCATGCAATGGCGTTGCCTCTGAGTTCGAACCCGCTGCTCCTGAAGAGACGACTATCAGTTTACTGAAGGATGGTTCCAATACCTTTTTATTTTCAATGAGTGCAGGTAATTGTGTTTTAA]
[-] EMBL CD127316 [TTCACGGATTTGAACAATATCTAAAGTAATGTTTTGAATTTAAAGTTCAAAACAGTCCTTAGCGTATAATTGCTACACACATGGAGTTTTATGTTATTTGATGACATACTGTTTCCAAATGATGTGTTATACTACTAAACTCTATTCGCCGAGGAATCTTCATGATACAACAAATAAGTCTTCAGTTATTGAAGTGGTCAGTTTTATTATCTTACTGATCTACTAGTAATCTTATTCGTTATCCTATAAAATGGGTAGTTCACAAAAATATAAGACAGTACTTGGAACATTAATCTAAAGGGTCTTTTCCATTTAACTAATGTTTTCCAGTACGATTTCAAGTGTTTTGCTAGCTAGGTTTGTGATTTGTGTGATCAGTATATTGTGATTCTGTTTTAGTCTAAAAACCCCGAGTGTGCGGTTAAGTCACTCGAAACCAATAATTTATCACCTGCATGCAATGGCGTTGCCTCTGAGTTCGAACCCGCTGCTCCTGAAGAGACGACTATCAGTTTACTGAAGGATGGTTCCAATACCTTTTTATTTTCAATGAGTGCAGGTAATTGTGTTTTAA]
consensusID : consensus_11109#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 558 fasta sequence
[ATACTTCTGCCTCTTCATCTAAAACCATGGCAATGTCAGCAAGAATACGTTCTGGTGGATTGTGATGTAGTAGTTGATCGCATATGAAACTGGATAATGTGGCTTCA-GCTTCTCCGATATAGCTTACAATCTTCTTATCTACCCAAGGCTTTATTCGAGAATTGACGAAATCGGCATCAACCATATCCCAGTCAATAGGATATGCAAACAGTTCCCTTTTGTGCGTTGGTATCCCCTCAATAATTCTTTTGATAATTGCTTTTTTTTCTTCTGTTGACAATGCTGAAACGGGTGGTAAGTTGTTTGAATCATTTTGGTTTGAATCGCCTCCATTTGAAGGATTGGTAATTGAGTTAGCCTTCAACGCTGAAGGTGGCAGCCAGGAAAGACCATGTTTTTTCGGTTTCTCATCCTGCTCTTCATCAGCGAATGCCGATGCAGTTTTGCGAACTACTGGTTCAACTGCACTCATTGAAAATAAAAAGGTATTGGAACCATCCTTCAGTAAACTGATAGTCGTCTCTTCACGGCAAGCAGCGGGTTCAGTACTCAGAGCAA]
[-] EMBL AA804150 [ATACTTCTGCCTCTTCATCTAAAACCATGGCAATGTCAGCAAGAATACGTTCTGGTGGATTGTGATGTAGTAGTTGATCGCATATGAAACTGGATAATGTGGCTTCAGGCTTCTCCGATATAGCTTACAATCTTCTTATCTACCCAAGGCTTTATTCGAGA ]
[-] EMBL CD146481 [ TGGCAATGTCAGCAAGAATACGTTCTGGTGGATTGTGATGTAGTAGTTGATCGCATATGAAACTGGATAATGTGGCTTCA GCTTCTCCGATATAGCTTACAATCTTCTTATCTACCCAAGGCTTTATTCGAGAATTGACGAAATCGGCATCAACCATATCCCAGTCAATAGGATATGCAAACAGTTCCCTTTTGTGCGTTGGTATCCCCTCAATAATTCTTTTGATAATTGCTTTTTTTTCTTCTGTTGACAATGCTGAAACGGGTGGTAAGTTGTTTGAATCATTTTGGTTTGATTCGCCTCCATTTGAAGGATTGGTAATTGAGTTAGC ]
[-] EMBL CD068167 [ AGAATACGTTCTGTTGGATTGTGATGTAGTAGTTGATCGCATATGAAACTGGATAATGTGGCTTCA GCTTCTCCGATATAGCTTACAATCTTCTTATCTACCCAAGGCTTTATTCGAGAATTGACGAAATCGGCATCAACCATATCCCAGTCAATAGGATATGCAAACAGTTCCCTTTTGTGCGTTGGTATCCCCTCAATAATTCTTTTGATAATTGCTTTTTTTTCTTCTGTTGACAATGCTGAAACGGGTGGTAAGTTGTTTGAATCATTTTGGTTTGAATCGCCTCCATTTGAAGGATTGGTAATTGAGTTAGCCTTCAACGCTGAAGGTGGCAGCCAGGAAAGACCATGTTTTTTCGGTTTCTCATCCTGCTCTTCATCAGCGAATGCCGATGCAGTTTTG ]
[+] EMBL CD189005 [ ATGTAGTAGTTGATCGCATATGAAACTGGATAATGTGGCTTCA GCTTCTCCGATATAGCTTACAATCTTCTTATCTACCCAAGGCTTTATTCGAGAATTGACGAAATCGGCATCAACCATATCCCAGTCAATAGGATATGCAAACAGTTCCCTTTTGTGCGTTGGTATCCCCTCAATAATTCTTTTGATAATTGCTTTTTTTTCTTCTGTTGACAATGCTGAAACGGGTGGTAAGTTGTTTGAATCATTTTGGTTTGAATCGCCTCCATTTGAAGGATTGGTAATTGAGTTAGCCTTCAACGCTGAAGGTGGCAGCCAGGAAAGACCATGTTTTTTCGGTTTCTCATCCTGCTCTTCATCAGCGAATGCCGATGCAGTTTTGCGAACTACTGGTTC ]
[+] EMBL CD183503 [ ATGTAGTAGTTGATCGCATATGAAACTGGATAATGTGGCTTCA GCTTCTCCGATATAGCTTACAATCTTCTTATCTACCCAAGGCTTTATTCGAGAATTGACGAAATCGGCATCAACCATATCCCAGTCAATAGGATATGCAAACAGTTCCCTTTTGTGTGTTGGTATCCCCTCAATAATTCTTTTGATAATTGTTTTTTTTTCTTCTGTTGACAATGCTGAAACGGGTGGTAAGTTGTTTGAATCATTTTGGTTTGAATCGCCTCCATTTGAAGGATTGGTAATTGAGTTAGCCTTCAACGCTG ]
[+] EMBL CD188943 [ ATGTAGTAGTTGATCGCATATGAAACTGGATAATGTGGCTTCG GCTTCTCCGATATAGCTTACAATCTTCTTATCTACCCAAGGCTTTATTCGAGAATTGACGAAATCGGCACCAACCATATCCCAGTCAATAGGATATGCAAACAGTTCCCTTTTGTGCGTTGGTATCCCCTCAATAATTCTTTTGATAATTGCTTTTTTTTCTTCTGTTGACAATGCTGAAACGGGTGGTAAGTTGTTTGAATCATTTTGGTTTGAATCGCCTCCATTTGAAGGATTGGTAATTGAGTTAGCCTTCAACGCTG ]
[-] EMBL CD060504 [ GAGAATTGACGAAATCGGCATCAACCATATCCCAGTCAATAGGATATGCAAACAGTTCCCTTTTGTGCGTTGGTATCCCCTCAATAATTCTTCTGATAATTGCTTTTTTTTCTTCTGTTGACAATGCTGAAACGGGTGGTAAGTTGTTTGAATCATTTTGGTTTGAATCGCCTCCATTTGAAGGATTGGTAATTGAGTTAGCCTTCAACGCTGAAGGTGGCAGCCAGGAAAGACCATGTTTTTTCGGTGTCTCATCCTGCTCTTCATCAGCGAATGCCGATGCTGTTTTGCGAACTACTGGTTCAACTGCACTCATTGAAAATAAAAAGGTATTGGAACCATCCTTCAGTAAACTGATAGTCGTCTCTTCACGGCAAGCAGCGGGTTCAGTACTCAGAGCAA]
[+] EMBL CD160112 [ AATTGACGAAATCGGCATCAACCATATCCCAGTCAATAGGATATGCAAACAGTTCCCTTTTGTGCGTTGGTATCCCCTCAATAATTCTTTTGATAATTGCTTTTTTTTCTTCTGTTGACAATGCTGAAACGGGTGGTAAGTTGTTTGAATCATTTTGGTTTGAATCGCCTCCATTTGAAGGATTGGTAATTGAGTTAGCCTTCAACGCTGAAGGTGGCAGCCAGGAAAGACCATGTTTTTTCGGTTTCTCATCCTGCTCTTCATCAGCGAATGCCGATGCAGTTTTGCGAACTACTGGTTCAACTGCACTCATTGAAAATCACAAGGTCTTGGAACCATCCTTCAGTAAACTGATAGT ]
[-] EMBL CD181750 [ AAGTTGTTTGAATCATTTTGGTTTGAATCGCCTCCATTTGAAGGATTGGTAATTGAGTTAGCCTTCAACGCTGAAGGTGGCAGCCAGGAAAGACCATGTTTTTTCGGTTTCTCATCC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11109#0 ATTTGAATGTTGTATTTTAAAATCACCCGCTTTCTTATGAGTCAGAAGGAAGATCAGAAT 60
consensus_11109#1 ------------------------------------------------------------
consensus_11109#2 ------------------------------------------------------------
consensus_11109#3 ------------------------------------------------------------
consensus_11109#0 GATAACAAACAATCACGCCCAAAAGGTACAGATTCTGGACGCTCAAGCTCGACAAACTTG 120
consensus_11109#1 ------------------------------------------------------------
consensus_11109#2 ------------------------------------------------------------
consensus_11109#3 ------------------------------------------------------------
consensus_11109#0 CAGTTACATTCGTCATATTCTCTTAACGACAGGGTTGATCGCGAATACCGTCGAGAGAGA 180
consensus_11109#1 ------------------------------------------------------------
consensus_11109#2 ------------------------------------------------------------
consensus_11109#3 ------------------------------------------------------------
consensus_11109#0 GGTCGCCGAAGTAGGAGTCGCTCAGGTTCATTGACTTCTAGGTCACAGAGACCAATAACT 240
consensus_11109#1 ------------------------------------------------------------
consensus_11109#2 ------------------------------------------------------------
consensus_11109#3 ------------------------------------------------------------
consensus_11109#0 AGCGGGTTTTTGACGTCGAACAAGGATATTGATAATGAAGAAGAATCAATCAAGAAAAAG 300
consensus_11109#1 ---------------GGGAATCGATAGCCTCTTAATGAAGAAGAATCAATCAAGAAAA-G 44
consensus_11109#2 ------------------------------------------------------------
consensus_11109#3 ------------------------------------------------------------
consensus_11109#0 TTAGAGAAAAAGCTTCGTGAGAAAGAAGAATCATATCAGAAGAGATTAAAACAGTGGGAA 360
consensus_11109#1 TTAGAGAAAAAGCTTCGTGAGAAAGAAGAATCATATCAGAAGAGATTAAAACAGTGGGAA 104
consensus_11109#2 ---------------------------------------------TTCACGGATTTGAAC 15
consensus_11109#3 ------------------------------------------------------------
consensus_11109#0 ATTCGTGAAAGAAAAAAGGCCAATGAATATGAACATGAGAGAGATCATGAAAGGA-AACG 419
consensus_11109#1 ATTCGTGAAAGAAAAAAGGCCAATGAATATGAACATGAGAGAGATCATGAAAGGA-AACG 163
consensus_11109#2 AATATCTAAAGTAATG----TTTTGAATTTAAAGTTCAAAACAGTCCTTAGCGTATAATT 71
consensus_11109#3 ----------ATACTTCTGCCTCTTCATCTAAA-ACCATGGCAATGTCAGCAAGAATACG 49
* * ** * ** * * * *
consensus_11109#0 ACAACGTGAATTGC-AGATCGAAGCTCAACGGCTAAAAGAGTTTTTTGAA-GATTATGAT 477
consensus_11109#1 ACAACGTGAATTGC-AGATCGAAGCTCAACGGCTAAAAGAGTTTTTTGAA-GATTATGAT 221
consensus_11109#2 GCTACACACATGG--AGTTTTATGTT-ATTTGATGACATACTGTTTCCAA-----ATGAT 123
consensus_11109#3 TTCTGGTGGATTGTGATGTAGTAGTTGATCGCATATGAAACTGGATAATGTGGCTTCAGC 109
** * * * * * * * * * * *
consensus_11109#0 GACAATGTGGAAGATCCTAAATATTATAGAGGGAGTGCCCTTCATCAGCGTTTGAAAGAT 537
consensus_11109#1 GACAATGTGGAAGATCCTAAATATTATAGAGGGAGTGCCCTTCATCAGCGTTTGAAAGAT 281
consensus_11109#2 G----TGTT-ATACTACTAAACTCTATTCGCCGAGGAATCTTCATGATACAACAAATAAG 178
consensus_11109#3 TTCTCCGATATAGCTTACAATCTTCTTATCTACCCAAGGCTTTATTCGAGAATTGACGAA 169
* * ** * *** ** * *
consensus_11109#0 CGTGAAATTGAAGAAGCGGCTGATGAACGTGATCGACAAAAGGAAATTGAACAACTTGAG 597
consensus_11109#1 CGTGAAATTGAAGAAGCGGCTGATGAACGTGATCGACAAAAGGAAATTGAACAACTTGAG 341
consensus_11109#2 TCTTCAGTTATTGAAG----TGGTCAGTTTTATTATCT------TACTGATCTACT--AG 226
consensus_11109#3 ATCGGCATCAACCATATC-CCAGTCAATAGGATATGCAAACAGTTCCCTTTTGTGCGTTG 228
* * * * ** * *
consensus_11109#0 ACAGCTCGCCGAAAGCTAATTGAAGAGGGTGATCCAAATGCAGAATCCATTATATTTCAA 657
consensus_11109#1 ACAGCTCGCCGAAAGCTAATTGAAGAGGGTGATCCAAATGCAGAATCCATTATATTTCAA 401
consensus_11109#2 TAATCTTATTCGTTATCCTATAAAATGGGTAGTTCACA---AAAATATAAGACAGTACT- 282
consensus_11109#3 GTATCCCCTCAATAATTCTTTTGA-TAATTGCTTTTTTTTCTTCTGTTGACAATGCTGAA 287
* * * * * * *
consensus_11109#0 ATGGAACAAAAAATGCAGGAGCATCTCAGAAGATGCTTACTGGTCAATGGTGATATGTCC 717
consensus_11109#1 ATGGAACAAAAAATGCAGGAGCATCTCAGAAGATGCTTACTGGTCAATGGTGATATGTCC 461
consensus_11109#2 -TGGAACATTAATCTAAAGGGTCTTTTCCAT----TTAACTAATGTTTTCCAGTACGATT 337
consensus_11109#3 ACGGGTGGTAAGTTGTTTGAATCATTTTGGTTTGAATCGCCTCCATTTGAAGGATTGGTA 347
** * * * * * * *
consensus_11109#0 ATCGAACCAGATGATAACC---AATGTCCTGAACCGGTTAGTGAGAATTTGCCGAGCGCT 774
consensus_11109#1 ATCGAACCAGATGATAACC---AATGTCCTGAACCGGTTAGTGAGAATTTGCCGAGCGCT 518
consensus_11109#2 -TCAAGTGTTTTGCTAGCT---AGGTTTGTGATTTGTGTGATCAGTATATTGTGA---TT 390
consensus_11109#3 ATTGAGTTAGCCTTCAACGCTGAAGGTGGCAGCCAGGAAAGACCATGTTTTTTCGGTTTC 407
* * * * * * * * *
consensus_11109#0 GAAGATGAGTCTA---AAAACCCCG----------------AGTGTG--------CGGTT 807
consensus_11109#1 GAAGATGAGGTAAGTTACAGCTCTATTGTAATATGTGCTATAGTGTGAATATCATCAGCT 578
consensus_11109#2 CTGTTTTAGTCTA---AAAACCCCG----------------AGTGTG--------CGGTT 423
consensus_11109#3 TCATCCTGCTCTT----CATCAGCG----------------AATGC---------CGATG 438
* * * ** *
consensus_11109#0 AAGTC---ACTCGAAACCA-ATAATTTATCACCTGCATGCAATGGCGTTGCCTCTGAGTT 863
consensus_11109#1 AGTTCTTTGTTCAAATCCATATGCTAAGTCATTTGTTTATCACATAATTAGAGTTCTGTT 638
consensus_11109#2 AAGTC---ACTCGAAACCA-ATAATTTATCACCTGCATGCAATGGCGTTGCCTCTGAGTT 479
consensus_11109#3 CAGTT----TTGCGAACTA-CTGGT---TCAACTGCACTCATTGAAAATAAAAAGGTATT 490
* * * * * * * *** ** * **
consensus_11109#0 CGAACC-CGCTGCTCCTGAAGAGACGACTATCAGTTTACTGAAGG--ATGGTTC------ 914
consensus_11109#1 TACACTTCATTTTTCTCGTAACATTGTATGTTCTCTTTTATAGCA--GTAGTCTAAACAA 696
consensus_11109#2 CGAACC-CGCTGCTCCTGAAGAGACGACTATCAGTTTACTGAAGG--ATGGTTCCAATAC 536
consensus_11109#3 GGAACCATCCT-TCAGTAAACTGATAGTCGTCTCTTCACGGCAAGCAGCGGGTTCAGTAC 549
** * * * * *
consensus_11109#0 ------------------------------------------------------------
consensus_11109#1 AAACAAGCTTTACAAACTGCGCAAAGCAATTCATTATTGTGGTTCAGCTTTCACGGATTT 756
consensus_11109#2 CTTTTTATTTT-CAATGAGTGCAGGTAATTGTGTTTTAA--------------------- 574
consensus_11109#3 TCAGAGCAA--------------------------------------------------- 558
consensus_11109#0 --------------------------------------
consensus_11109#1 TGAACAATATTCTAAATCTAAAAAGCCCGAGTGTGCGG 794
consensus_11109#2 --------------------------------------
consensus_11109#3 --------------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||