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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11110#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 28 consensus length = 1491 fasta sequence
[AAATCGGATTCTTGAGGTCGTAAGATTTCCGCAGGTCATGGCGGGCATCCCGCAAGCAGTCAATGTTCAC-AGCACCAGTCAAATGACTGACAATTTAAGCAGAAATGAAATAATTCAATGGGTTAAT-CAC-TGTCTTAACAGCAGCTACGGTAAAGTAGAGGAGTTGTGCAGTGGAGCAGCTTATTGTCAGCTGGTGGATATGCTCTTCCCAGGGACGTTGTTGTTTAAGAAAGTCAAATTTAACACAAAGTTGGAGCATGAGTACATTAATAACTTCAAAGTATTACAAGCTCTTTTTAAGAAACATGGCGTAGATAAAGAGGTTCCAATCGAAAAGTTAGTAAAAGGAAAGTTCCAAGATAATTTTGAATTTCTACAATGGTTTAAACGATTTTTCGACGTAAACTATGATGGTCATCTTTATGATGCCTTAACAGCTAGGGGAGGTGAGAAAATTATTGGCAGCGGGAAAACTCCAAACAAGTCCCAACTCGATCAGCCACGCAATAGCATCTCATCAAATGCTAAACCCACAAGTCAAAAGCAAGTAGTTACAACTTTGCGCACCAGTCAGTCTGGCGTTTCAGGAACTCCTACTAATAATAATCATTATTCTGCTGGAGATAATGCAGAAGTGGCCATCCTGAAGCAACAATTCGATCAGCTTACATTAGAGGCTGAACAAAACAAGACTACTATTGAAGGTCTACTTCGTGAAAGGGATTTCTACTTCAACAAGCTACGCAGCATTGAAATAATTTGTCAAGAAAACAGGAAAGTAGACTTGACTAAGAGTATCTTTGAAATCCTTTACGCAACCGAAGATGGTTTCACTGCTCCCGAAGGTGAAGAACCGGAAGAATTTTAGCTGGATCCTGCTTTTAACAACCCGGTACTCCTAATGCCGATTTTAGGCAAATGTTCTTTATTAATCTTATCGATGATAGTAGTTGTAGTACTACTGTCTCAGTTCATTAGCACAATCTGCCTCCCATTATTTGAGTGCTGAAAATGTTGATTTTATTTTTTGGCTTGTATGTATTTGTTAGCGACTTTATTCTGCTTGTAAACATTTTTCAGCCCCTTGGATTTCCATAAAACTATTATTATTGTTACTATCATTATTAATGAACTACATTTTTGGACTTTCACTCTTACCTTAAATACAGTTTTTGCTTTTAGTTTACTCGATAAAACAACATCTGTCATCAAATCACTTATTGTCTGTTTTAATTTATTACAAAGTTCTCTGCAAAGTTTTGGTTATCTGTGAAATTGAAGTACTCCGTTATATAAATATGCATATTGTAAAGATTTTTGAACAAATCTTGCGTTTATATGTTCATATAGGCTCACGTGCCCATGTACCGGA-TTTTTTTCATAAAGAGGTTTTTGAACTTCTTTAGTTTACTACATTTCTATCCTTACAATAAATATGATAACTGATCAGCATACTTTGTTTGTTATGTAAAATGCTAACTTCACATACAG]
[+] EMBL CD179680 [AAATCGGATTCTTGAGGTCGTAAGATTTCCGCAGGTCATGGCGGGCATCCCGCAAGCAGTCAATGTTCAC AGCACCAGTCAAATGACTGACAATTTAAGCAGAAATGAAATAATTCAATGGGTTAATNCAC TGTCTTAACAGCAGCTACGGTAAAGTAGAGGAGTTGTGCAGTGGATCAGCTTATTGTCAGCTGGTGGATAT ]
[+] EMBL AI067902 [ TTTCCGCAGGTCATGGCGGGCATCCCGCAAGCAGTCAATGTTCAC AGCACCAGTCAAATGACTGACAATTTAAGCAGAAATGAAATAATTCAATGGGTTAAT CAC TGTCTTAACAGCAGCTACGGTAAAGTAGAGGAGTTGTGCAGTGGAGCAGCTTATTGTCAGCTGGTGGATATGCTCTTCCCAGGGACGTTGTTGTTTAAGAAAGTCAAATTTAACACAAAGTTGGAGCATGAGTACATTAATAACTTCAAAGTATTACAAGCTCTTTTTAAGAAACATGGCGTAGATAAAGAGGTTCCAATCGAAAAGTTAGTAAAAGGAAAGTTCCAAGATAATTTTGAATTTCTACAATGGTTTAAACGATTTTTCGACGTAAACTATGATGGTCATCTTTATGATGCCTTAACAGCTAGGGGAGGTGAGAAAATTATTGGCAGCGGGAAAACTCCAAACAAGTCCCAACTCGATCAGCCACGCAATAGCATCTCATCAAATGCTAAACCCACAAGTCAAAAGCAAGTAGTTACAACTTTGCGCACCAGTCAGTCTGGCGTTTCAGGAACTCCTACTAATAATAATCATTATTCTGCTGGAGATAATGCAAAAATGGCCATCCT ]
[+] EMBL AI067996 [ TTTCCGCAGGTCATGGCGGGCATCCCGCAAGCAGTCAATGTTCAC AGCACCAGTCAAATGACTGACAATTTAAGCAGAAATGAAATAATTCAATGGGTTAAT CAC TGTCTTAACAGCAGCTACGGTAAAGTAGAGGAGTTGTGCAGTGGAGCAGCTTATTGTCAGCTGGTGGATATGCTCTTCCCAGGGACGTTGTTGTTTAAGAAAGTCAAATTTAACACAAAGTTGGAGCATGAGTACATTAATAACTTCAAAGTATTACAAGCTCTTTTTAAGAAACATGGCGTAGATAAAGAGGTTCCAATCGAAAAGTTAGTAAAAGGAAAGTTCCAAGATAATTTTGAATTTCTACAATGGTTTAAACGATTTTTCGACGTAAACTATGATGGTCATCTTTATGATGCCTTAACAGCTAGGGGAGGTGAGAAAATTATTGGCAGCGGGAAAACTCCAAACAAGTCCCAACTCGATCAGCCACGCAATAGCATCTCATCAAATGCTAAACCCACAAGTCAAAAGCAAGTAGTTACAACTTTGCGCACCAGTCAATCTGGCGTTTCAGGAACTCCTACTA ]
[+] EMBL AI068030 [ CAGGTCATGGCGGGCATCCCGCAAGCAGTCAATGTTCAC AGCACCAGTCAAATGACTGACAATTTAAGCAGAAATGAAATAATTCAATGGGTTAAT CAC TGTCTTAACAGCAGCTACGGTAAAGTAGAGGAGTTGTGCAGTGGAGCAGCTTATTGTCAGCTGGTGGATATGCTCTTCCCAGGGACGTTGTTGTTTAAGAAAGTCAAATTTAACACAAAGTTGGAGCATGAGTACATTAATAACTTCAAAGTATTACAAGCTCTTTTTAAGAAACATGGCGTAGATAAAGAGGTTCCAATCGAAAAGTTAGTAAAAGGAAAGTTCCAAGATAATTTTGAATTTCTACAATGGTTTAAACGATTTTTCGACGTAAACTATGATGGTCATCTTTATGATGCCTTAACA ]
[+] EMBL AI067385 [ CAGGTCATGGCGGGCATCCCGCAAGCAGTCAATGTTCAC AGCACCAGTCAAATGACTGACAATTTAAGCAGAAATGAAATAATTCAATGGGTTAAT CAC TGTCTTAACAGCAGCTACGGTAAAGTAGAGGAGTTGTGCAGTGGAGCAGCTTATTGTCAGCTGGTGGATATGCTCTTCCCAGGGACGTTGTTGTTTAAGAAAGTCAAATTTAACACAAAGTTGGAGCATGAGTACATTAATAACTTCAAAGTATTACAAGCTCTTTTTAAGAAACATGGCGTAGATAAAGAGGTTCCAATCGAAAAGTTAGTAAAAGGAAAGTTCCAAGATAATTTTGAATTTCTACAATGGTTTAAACGATTTTTCGACGTAAACTATGATGGTCATCTTTATGATGCCTTAACAGCTATGGGAGGTGAGAAAAT ]
[+] EMBL AI068285 [ CAGGTCATGGCGGGCATCCCGCAAGCAGTCAATGTTCAC AGCACCAGTCAAATGACTGACAATTTAAGCAGAAATGAAATAATTCAATGGGTTAAT CAC TGTCTTAACAGCAGCTACGGTAAAGTAGAGGAGTTGTGCAGTGGAGCAGCTTATTGTCAGCTGGTGGATATGCTCTTCCCAGGGACGTTGTTGTTTAAGAAAGTCAAATTTAACACAAAGTTGGAGCATGAGTACATTAATAACTTCAAAGTATTACAAGCTCTTTTTAAGAAACATGGCGTAGATAAAGAGGTTCCAATCGAAAAGTTAGTAAAAGGAAAGTTCCAAGATAATTTTGAA ]
[-] EMBL CD149931 [ TGTTCACAAGCGCCAGTCGAATGAGTCCAAATTTAAGCAGAAGTGAAATAATTCAGCGGGTTAAT CACGTGTCTTAACAGCAGCTACGGTAAAGTAGAGGAGTTGTGCAATGCAGCAGCTTATTGTCAGCTGGTGGATATGCTCTTCCCAGGGACGTTGTTGTTTAACAAAGTCAAATTTAACACAAAGTTCGAGCATGAGTACATTAATAACTTCAAAGTATTAC ]
[+] EMBL CD133100 [ AATGACTGACAATTTAAGCAGAAATGAAATAATTCAATGGGTTAAT CAC TGTCTTAACAGCAGCTACGGTAAAGTAGAGGAGTTGTGCAGTGGAGCAGCTTATTGTCAGCTGGTGGATATGCTCTTCCCAGGGACGTTGTTGTTTAAGAAAGTCAAATTTAACACAAAGTTGGAGCATGAGTACATTAATAACTTCAAAGTATTACAAGCTCTTTTTAAGAAACATGGCGTAGATAAAGAGGTTCCAATCGAAAAGTTAGTAAAAGGAAAGTTCCAAGATAATTTTGAATTTCTACAATGGTTTAAACGATTTTTCGACGTAAACTATGATGGTCATCTTTATGATGCCTTAACAGCTATGGGAGGTGAGAAAATTATTGGCAGCGGGTAAACTCCA ]
[+] EMBL CD083210 [ ATAATTCAATGGGTTAAT CAC TGTCTTAACAGCATCTACTGTAAAGTAAAGGAATTGTGCAGTGGAGCAGCTTATTGTCAGCTGGTGGATATGCTCTTtc ]
[+] EMBL CD145541 [ TAATTCAATGGGTTAAT CAC TGTCTTAACAGCAGCTACGGTAAAGTGGAGGAGTTGTGCAGTGGAGCAGCTTATTGTCAGCTGGTGGATATGCTCTTCCCAGGGACGTTGTTGTTTAAGAAAGTCAAATTTAACACAAAGTTGGAGCATGAGTACATTAATAACTTCAAAGTATTACAAGCTCTTTTTAAGAAACATGGCGTAGATAAAGAGGTTCCAATCGAAAAGTTAGTAAAAGGAAAGTTCCAAGATAATTTTGAATTTCTACAATGGTTTAAACGATTTTTCGACGTAAACTATGATGGTCATCTTTAT ]
[+] EMBL CD179677 [ CAATGGGTTAAT CAC TGTCTTAACAGCAGCTACGGTAAAGTAGAGGAGTTGTGCAGTGGAGCAGCTTATTGTCAGCTGGTGGATATGCTCTTCCCAGGGACGTTGTTGTTTAAGAAAGT ]
[+] EMBL CD201342 [ AT CAC TGTCTTAACAGCAGCTACGGTAAAGTAGAGGAGTTGTGCAGTGGAGCAGCTTATTGTCAGCTGGTGGATATGCTCTTCCCAGGGACGTTGTTGTTTAAGAAAGTCAAATTTAACACAAAGTTGGAGCATGAGTACATTAATAACTTCAAAGTATTACAAGCTCTTTTTAAGAAACATGGCGTAGATAAAGAGGTTCCAATCGAAAAGTTAGTAAAAGGAAAGTTCCAAGATAATTTTGAATTTCTACAATGGTTTAAACGATTTTTCGACGTAAACTATGATGGTCATCTTTATGATGCCTTAACAGCTAGGGGAGGTGAGAAAATTATTGGCAGCGGGAAAACTCCAAACAAGTCCCAACTCGATCAGCCACGCAATAGCATCTCATCAAATGCTAAACCCACAAGTCAAAAGCAAGTAGTTACAACTT ]
[-] EMBL CD132134 [ GGAGCAGCTAATTGTCAGCTGGTGGATATGCTCTTCCCAGGGACGTTGTTGTTTAAGAAAGTCAAATTTAACACAAAGTTGGAGCATGAGTACATTAATAACTTCAAAGTATTACAAGCTCTTTTTAAGAAACATGGCGTAGATAAAGAGGTTCCAATCGAAAAGTTAGTAAAAGGAAAGTTCCAAGATAATTTTGAATTTCTACAATGGTTTAAACGATTTTTCGACGTAAACTATGATGGTCATCTTTATGATGCCTTAACAGCTAGGGGAGGTGAGAAAATTATTGGCAGCGGGAAAACTCCAAACAAGTCCCAACTCGATCAGCCACGCAATAGCATCTCATCAAATGCTAAA ]
[+] EMBL CD122171 [ ATTGTCAGCTGGTGGATATGCTCTTCCCAGGGACGTTGTTGTTTAAGAAAGTCAAATTTAACACAAAGTTGGAGCATGAGTACATTAATAACTTCAAAGTATTACAAGCTCTTTTTAAGAAACATGGCGTAGATAAAGAGGTTCCAATCGAAAAGTTAGTAAAAGGAAAGTTCCAAGATAATTTTGAATTTCTACAATGGTTGAAACGATTTTTCGACGTAAACTATGATGGTCATCTTTATGATGCCTTGACAGCTAGGGGAGGTGAGAAAATTATTGGCAGCGGGAAAACTCCAAACAAGTCCCAACTCGATCAGCCACGCAATAGCATCTCATCAAATGCTAAACCCACAAGTCAAAAGCAA ]
[+] EMBL CD122250 [ ATTGTCAGCTGGTGGATATGCTCTTCCCAGGGACGTTGTTGTTTAAGAAAGTCAAATTTAACACAAAGTTGGAGCATGAGTACATTAATAACTTCAAAGTATTACAAGCTCTTTTTAAGAAACATGGCGTAGATAAAGAGGTTCCAATCGAAAAGTTAGTAAAAGGAAAGTTCCAAGATAATTTTGAATTTCTACAATGGTTTAAACGGTTTTTCGACGTAAACTATGATGGTCATCTTTATGATGCCTTAACAGCTAGGGGAGGTGAGAAAATTATTGGCAGCGGGAAAACTCCAAACAAGTCCCAACTCGATCAGCCACGCAATAGCATCTCATCAAATGCTAAACCCACAAGTCAAAAGCAA ]
[+] EMBL CD122165 [ ATTGTCAGCTGGTGGATATGCTCTTCCCAGGGACGTTGTTGTTTAAGAAAGTCAAATTTAACACAAAGTTGGAGCATGAGTACATTAATAACTTCAAAGTATTACAAGCTCTTTTTAAGAAACATGGCGTAGATAAAGAGGTTCCAATCGAAAAGTTAGTAAAAGGAAAGTTCCAAGATAATTTTGAATTTCTACAATGGTTTAAACGATTTTTCGACGTAAACTATGATGGTCATCTTTATGATGCCTTAACAGCTAGGGGAGGTGAGAAAATTATTGGCAGCGGGAAAACTCCAAACAAGTCCCAACTCGATCAGCCACGCAATAGCATCTCATCAAATGCTAAACCCACAAGTCAAAAGCAA ]
[-] EMBL CD133659 [ GATATGCTCTTCCCAGGGACGTTGTTGTTTAAGAAAGTCAAATTTAACACAAAGTTGGAGCATGAGTACATTAATAACTTCAAAGTATTACAAGCTCTTTTTAAGAAACATGGCGTAGATAAAGAGGTTCCCCTCGAAAAGTTAGTAAAAGGAAAGTTCCAAGATAATTTTGAATTTCTACAATGGTTTAAACGATTTTTCGACGTAAACTATGATGGTCATCTTTATGATG ]
[-] EMBL CD202502 [ CTCTTCCCAGGGACGTTGTTGTTTAAGAGAGTCAAATTTAACACAAAGTTGGAGCATGAGTACATTAATAACTTCAAAGTATTACAAGCTCTTTTTAAGAAACATGGCGTAGATAAAGAGGTTCCAATCGAAAAGTTAGTAAAAGGAAAGTTCCAAGATAATTTTGAATTTCTACAATGGTTTAAACGATTTTTCGACGTAAACTATGATGGTCATCTTTATGATGCCTTAACAGCTAGGGGAGGTGAGAAAATTATTGGCAGCGGGAAAACTCCAAACAAGTCCCAACTCGATCAGCCACGCAATAGCATCTCATCAAATGCTAAA ]
[+] EMBL AI976026 [ GGCGTAAATAAAGAGGTTCCAATCGCAAAGTTAGTAAAAGGAAAGCTCCAAGATAATTTTGAATCTCTACAGTGGGTTAAACGATTTTTCGACGTAAACTATGATGGTCATCTTTATGATGCCTTAACAGCTAGGGGAGGTGAG ]
[+] EMBL CD200977 [ AAAATTATTGGCAGCGGGAAAACTCCAAACAAGTCCCAACTCGATCAGCCACGCAATAGCATCTCATCAAATGCTAAACCCACAAGTCAAAAGCAAGTAGTTACAACTTTGCGCACCAGTCAGTCTGGCGTTTCAGGAACTCCTACTAATAATAATCATTATTCTGCTGGAGATAATGCAGAAGTGGCCATCCTGAAGCAACAATTCGATCAGCTTACATTAGAGGCTGAACAAAACAAGACTACTATTGAAGGTCTACTTCGTGAAAGGGATTTCTACTTCAACAAGCTACGCAGCATTGAAATAATTTGTCAAGAAAACAGGAAAGTAGACTTGACTAAGAGTATCTTTGAAATCCTTTACGCAACCGAAGATGGTTTCACTGCTCCCGAAGGTGAAGAACCGGAAGAATTTTAGCTGGATCCTGCTTTTAACAACCCGGTACTCCTAATGCCGATTTTAGGCAAATGTTCTCTATTAATCTTATCGATGATAGTAGTTGTAGTACTACTGTCTCAGTTCATTAGCACAATCTGCCTCCCATTATTTGAGTGCTG AAATGNTGATTTTATTTTTTGGCTTGGATGTATTTNGTAGCGTCTTTATTCTGCT ]
[+] EMBL CD183842 [ ATCCCATCAAATGCTAAACCCACAAGTCAAAAGCAAGTAGTTACAACTTTGCGCACCGGTCAGTCTGGCGTTTCAGGAACTCCTACTAATAATAATCATTATTCTGCTGGAGATAATGCAGAAGTGGCCATCCTGAAGCAACAATTCGATCAGCTTACATTAGAGGCTGAACAAAACAAGACTACTATTGAAGGTCTACTTCGTGAAAGGGATTTCTACTTCAACAAGCTACGCAGCATTGAAATAATTGGTCAAGAAAACAGGAAAGTAGACTTGACTAAGAGTATCTTTGAAATCCTTTACG ]
[+] EMBL CD123164 [ CAAGTAGTTACAACTTTGCGCACCAGTCAGTCTGGCGTTTCAGGAACTCCTACTAATAATAATCATTATTCTGCTGGAGATAATGCAGAAGTGGCCATCCTGAAGCAACAACTCGATCAGCTTACATTAGAGGCTGAACAAAACAAGACTACTATTGAAGGTCTACTTCGTGAAAGGGATTTCTACTTCAACAAGCTACGCAGCATTGAAATAATTTGTCAAGAAAACAGGAAAGTAGACTTGACTAAGAGTATCTTTGAAATCCTTTACGCAACCGAAGATGGTTTCACTGCTCCCGAAGGTGAAGAACCGGAAGAATTTTAGCTGGATC ]
[+] EMBL CD194424 [ GTAGTTACAACTTTGCGCACCAGTCAGTCTGGCGTTTCAGGAACTCCTACTAATAATAATCATTATTCTGCTGGAGATAATGCAGAAGTGGCCATCCTGAAGCAACAATTCGATCAGCTTACATTAGAGGCTGAACAAAACAAGACTACTATTGAAGGTCTACTTCGTGAAAGGGATTTCTACTTCAACAAGCTACGCAGCATTGAAATAATTTGTCAAGAAAACAGGAAAGTAGACTTGACTAAGAGTATCTTTGAAATCCTTTACGCAACCG ]
[+] EMBL CD180956 [ CGTTTCAGGAACTCCTACTAATAATAATCATTATTCTGCTGGAGATAATGCAGAAGTGGCCATCCTGAAGCAACAATTCTATCAGCTTACATTAGAGGCTGAACAAAACAAGACTACTATTGAAGGTCTACTTCGTGAAAGGGATTTCTACTTCAACAAGCTACGCAGCATTGAAATAATTTGTCAAGAAAACAGGAAAGTAGACTTGGCTAAGAGTATCTTTGAAATCCTTTACGCAACCGAAGATGGTTTCACTGCTCCCGAAGGTGAAGAACCGGAAGAATTTTAGCTGGt ]
[+] EMBL AI976675 [ GCCATCCTGAAGCAACAATTCGATCAGCTTACATTAGAGGCTGAACAAAACAAGACTACTATTGAAGGTCTACTTCGTGAAAGGGATTTCTACTTCAACAAGCTACGCAGCATTGAAATAATTTGTCAAGAAAACAGGAAAGTAGACTTGACTAAGAGTATCTTTGAAATCCTTTACGCAACCGAAGATGGTTTCACTGCTCCCGAAGGTGAAGAACCGGAAGAATTTTAGCTGGATCCTGCTTTTAACAACCCGGTACTCCTAATGCCGATTTTAGGCAAATGTTCGTTATTAATCTTATCGATGATAGTAGGTGTAGGACTACTGTCTCAGTTCATTAGCACAATCTGCCTGCCATTATTTGAGTGCTGAAAATGTTGATTGTATTTATTGCTTTGTATGTATTTGTTAGCGACTTTATTCTGCTTGTAAACATTTTTCAGCCCCTTGGATTTCCATAAAACTATTATTATTGATACTATCATTATTAATGAACTACATTTTTGGACTTTCACTCTTACCTTAAATACAGNCATTGCTTTTAGTTTACTCcg ]
[+] EMBL CD182344 [ AGGTCCACTTCGTGAAAGGGATTTCTACTTCAACAAGCTACGCAGCATTGAAATAATTTGTCAAGAAAACAGGAAAGTAGACTTGACTAAGAGTATCTTTGAAATCCTTTACGCAACCGAAGATGGTTTCACTGCTCCCGAAGGTGAAGAACCGGAAGAATTTTAGCTGGATCCTGCTTTTAACAACCCGGTACTCCTAATGCCGATTTTAGGCAAATGTTCTTTATTAATCTTATCGATGATAGTAGTTGTAGTACTACTGTCTCAGTTCATTAGCACAATCTGCCTCCCATTATTTGAGTGCTGAAAATGTTGATTNTATTTTTTGGCTTGNATGT ]
[-] EMBL CD133351 [ TTAGCACAATCTGCCTCCCATTATTTGAGTGCTGAAAATGTTGATTTTATTTTTTGCTTTGTATGTATTTGTTAGCGCCTTTATTCTGCTTGTAAACATTTTCCAGCCCCTTGGATTTCCATAAAACTATTATTATTGTTACTATCATTATTAATGAACTACATTTTTGGACTTTCACTCTTACCTTAAATACAGTTTTTGCTTTTAGTTTACTCGATAAAACAACATCTGTCATCAAATCACTTATTGTCTGTTTTAATTTATTACAAAGTTCTCTGCAAAGTTTTGGTTATCTGTGAAATTGAAGTACTCCGTTATATAAATATGCATATTGTAAAGATTTTTGAACAAATCTTGCGTTTATATGTTCATATAGGCTCACGTGCCCATGTACCGGA TTTTTTTCATAAAGAGGTTTTTGAACTTCTTTAGTTTACTACATTTCTATCCTTACAATAAATATGATAACTGATCAGCATACTTTGTTTGTTATGTAAAATGCTAACTTCACATACAG]
[-] EMBL CD132916 [ ATTATTATTGTTACTATCATTATTAATGAACTACATTTTTGGACTTTCACTCTTACCTTAAATACGGTTTTTGCTTTTAGTTTACTCGATAAAACAACATCTGTCATCAAATCACTTATTGTCTGTTTTAATTTATTACAAAGTTCTCTGCAAAGTTTTGGTTATCTGTGAAATTGAAGTACTCCGTTATATAAATATGCATATTGTAAAGATTTTTGAACAAATCTTGCGTTTATATGTTCATATAGGCTCACGTGCCCATGTACCGGATTTTTTTTCATAAAGAGGTTTTTGAACTTCTTTAGTTTACTACATTTCTATCCTTACAATAAATATGATAACTGATCAGCATACTTTGTTTGTTATGTAAAATGCTAACTTCACATACAG]
consensusID : consensus_11110#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 496 fasta sequence
[CTCGAGGCCAAGACCGGACGTTGTTGAAATCCTTTACGCAACCGAAGATGGTTTCACTGCTCCCGAAGGTGAAGAACCGGAAGAATTTTAGCTGGATCCTGCTTTTAACAACCCGGTACTCCTAATGCCGATTTTAGGCAAATGTTCTTTATTAATCTTATCGATGATAGTAGTTGTAGTACTACT-GTCTCAGTTCATTAGCACAATCTGCCTCCCATTATTTGAGTGCTGAAAATGTTGATTTTATTTTTTGCTTTGTATGTATTTGTTAGCGTCTTTATTCTGCTTGTAAACATTTTCCAGCCCCTTGGATTTCCATAAAACTATTATTATTGTTACTATCATTATTAATGAACTACATTTTTGGACTTTCACTCTTACCTTAAATACAGTTTTTGCTTTTAGTTTACTCGATAAAACAACATCTGTCATCAAATCACTTATTGTCTGTTTTAATTTATTACAAAGTTCTCTGCAAAGTTTTGGTTATCTGTGA]
[+] EMBL CD084417 [CTCGAGGCCAAGACCGGACGTTGTTGAAATCCTTTACGCAACCGAAGATGGTTTCACTGCTCCCGAAGGTGAAGAACCGGAAGAATTTTAGCTGGATCCTGCTTTTAACAACCCGGTACTCCTAATGCCGATTTTAGGCAAATGTTCTTTATTAATCTTATCGATGATAGTAGTTGTAGTACTACT GTCTCAGTTCATTAGCACAATCTGCCTCCCATTATTTGAGTGCTGAAAATGTTGATTTTATTTTTTGCTTTGTATGTATTTGTTAGCGTCTTTATTCTGCTTGTAAACATTTTCCAGCCCCTTGGATTTCCATAAAACTATTATTATTGTTACTATCATTATTAATGAACTACATTTTTGGACTTTCACTCTTACCTTAAATACAGTTTTTGCTTTTAGTTTACTCGATAAAACAACATCTGTCATCAAATCACTTATTGTCTGTTTTAATTTATTACAAAGTTCTCTGCAAAGTTTTGGTTATCTGTGA]
[+] EMBL CD130236 [ TGAAATCCTTTACGCAACCGAAGATGGTTTCACTGCTCCCGAAGGTGAAGAACCGGAAGAATTTTAGCTGGATCCTGCTTTTAACAACCCGGTACTCCTAATGCCGATTCTAGGCAAATGTTCTTTATTAATCTTATCGATGATAGTAGTTGTAGTACTACT G ]
[-] EMBL CD119654 [ ACAACCCGGTACTCCTAATGCCGATTTTAGGCAAATGTTCTTTATTAATCTTATCGATGATAGTAGTTGTAGTACTACT GTCTCAGTTCATTAGCACAATCTGCCTCCCATTATTTGAGTGCTGAAAATGTTGATTTTATTTTTTGCTTTGTATGTATTTGTTAGCGTCTTTATTCTGCTTGTAAACATTTTCCAGCCCCTTGGATTTCCATAAAACTATTATTATTGTTACTATCATTATTAATGAACTACATTTTTGGACTTTCACTCTTACCTTAAATACAGTTTTTGCTTTTAGTTTACTCGATAAAACAACATCTGTCATCAAATCACTTATTGTCTGTTTTAATTTATTACAAAGTTCTCTGCA ]
[-] EMBL CD119655 [ TAGTA TACTGGTCTCAGTTCATTAGCACAATGTGCCTCCCATTATTTGAGTGCTGAAAATGTTGATTTTATTTTTTGCTTTGTATGTATTTGTTAGCGTCTTTATTCTGCTTGTAAACATTTTCCAGCCCCTTGGATTTCCATAAAACTATTATTATTGTTACTATCATTATTAATGAACTACATTTTTGGACTTTCACTCTTACCTTAAATACAGTTTTTGCTTTTAGTTTACTCGATAAAACAACATCTGTCATCAAATCACTTATTGTCTGTTTTAATTTATTACAAAGTTCTNTGCA ]
consensusID : consensus_11110#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 467 fasta sequence
[GACAGCGTTGATGGCGAGGGCGAAGGGGAGGTGGGAAAATTATTGGCAGCGGGAAAACTCCAAACAAGTCCCAACTCGATCAGCCACGCAATAGCATCTCATCAAATGCTAAACCCACAAGTCAAAAGCAAGTAGTTACAACTTTGCGCACCAGTCAGTCTGGCGTTTCAGGAACTCCTACTAATAATAATCATTATTCTGCTGGAGATAATGCAGAAGTGGCCATCCTGAAGCAACAATTCGATCAGCTTACATTAGAGGCTGAACAAAACAAGACTACTATTGAAGGTCTACTTCGTGAAAGGGATTTCTACTTCAACAAGCTACGCAGCATTGAAATAATTTGTCAAGAAAACAGGANAGTAGACTTGACTAAGAGTATCTTTGAAATCCTTTACGCAACCGAAGATGGGTTCACTGCNTCCGAAGGTGAAGAACCNGGAGAATNNTAGCTGGGATCTGCTTTA]
[+] EMBL CD182391 [GACAGCGTTGATGGCGAGGGCGAAGGGGAGGTGGGAAAATTATTGGCAGCGGGAAAACTCCAAACAAGTCCCAACTCGATCAGCCACGCAATAGCATCTCATCAAATGCTAAACCCACAAGTCAAAAGCAAGTAGTTACAACTTTGCGCACCAGTCAGTCTGGCGTTTCAGGAACTCCTACTAATAATAATCATTATTCTGCTGGAGATAATGCAGAAGTGGCCATCCTGAAGCAACAATTCGATCAGCTTACATTAGAGGCTGAACAAAACAAGACTACTATTGAAGGTCTACTTCGTGAAAGGGATTTCTACTTCAACAAGCTACGCAGCATTGAAATAATTTGTCAAGAAAACAGGANAGTAGACTTGACTAAGAGTATCTTTGAAATCCTTTACGCAACCGAAGATGGGTTCACTGCNTCCGAAGGTGAAGAACCNGGAGAATNNTAGCTGGGATCTGCTTTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11110#0 AAATCGGATTCTTGAGGTCGTAAGATTTCCGCAGGTCATGGCGGGCATCCCGCAAGCAGT 60
consensus_11110#1 ------------------------------------------------------------
consensus_11110#2 ------------------------------------------------------------
consensus_11110#0 CAATGTTCACAGCACCAGTCAAATGACTGACAATTTAAGCAGAAATGAAATAATTCAATG 120
consensus_11110#1 ------------------------------------------------------------
consensus_11110#2 ------------------------------------------------------------
consensus_11110#0 GGTTAATCACTGTCTTAACAGCAGCTACGGTAAAGTAGAGGAGTTGTGCAGTGGAGCAGC 180
consensus_11110#1 ------------------------------------------------------------
consensus_11110#2 ------------------------------------------------------------
consensus_11110#0 TTATTGTCAGCTGGTGGATATGCTCTTCCCAGGGACGTTGTTGTTTAAGAAAGTCAAATT 240
consensus_11110#1 ------------------------------------------------------------
consensus_11110#2 ------------------------------------------------------------
consensus_11110#0 TAACACAAAGTTGGAGCATGAGTACATTAATAACTTCAAAGTATTACAAGCTCTTTTTAA 300
consensus_11110#1 ------------------------------------------------------------
consensus_11110#2 ------------------------------------------------------------
consensus_11110#0 GAAACATGGCGTAGATAAAGAGGTTCCAATCGAAAAGTTAGTAAAAGGAAAGTTCCAAGA 360
consensus_11110#1 ------------------------------------------------------------
consensus_11110#2 ------------------------------------------------------------
consensus_11110#0 TAATTTTGAATTTCTACAATGGTTTAAACGATTTTTCGACGTAAACTATGATGGTCATCT 420
consensus_11110#1 ------------------------------------------------------------
consensus_11110#2 ------------------------------------------------------------
consensus_11110#0 TTATGATGCCTTAACAGCTAGGGGAGGTGAGAAAATTATTGGCAGCGGGAAAACTCCAAA 480
consensus_11110#1 ------------------------------------------------------------
consensus_11110#2 ------------------------------------------------------------
consensus_11110#0 CAAGTCCCAACTCGATCAGCCACGCAATAGCATCTCATCAAATGCTAAACCCACAAGTCA 540
consensus_11110#1 ------------------------------------------------------------
consensus_11110#2 ------------------------------------------------------------
consensus_11110#0 AAAGCAAGTAGTTACAACTTTGCGCACCAGTCAGTCTGGCGTTTCAGGAACTCCTACTAA 600
consensus_11110#1 ------------------------------------------------------------
consensus_11110#2 ------------------------------------------------------------
consensus_11110#0 TAATAATCATTATTCTGCTGGAGATAATGCAGAAGTGGCCATCCTGAAGCAACAATTCGA 660
consensus_11110#1 ------------------------------------------------------------
consensus_11110#2 ------------------------------------------------------------
consensus_11110#0 TCAGCTTACATTAGAGGCTGAACAAAACAAGACTACTATTGAAGGTCTACTTCGTGAAAG 720
consensus_11110#1 ------------------------------------------------------------
consensus_11110#2 ------------------------------------------------------------
consensus_11110#0 GGATTTCTACTTCAACAAGCTACGCAGCATTGAAATAATTTGTCAAGAAAACAGGAAAGT 780
consensus_11110#1 -------------------------------------------------------CTCGA 5
consensus_11110#2 -------------------------------------------------GACAGCGTTGA 11
*
consensus_11110#0 AGACTTGACTAAGAGTATCTTTGAAATCCTTTACGCAACCGAAGATGGTTTCACTGCTCC 840
consensus_11110#1 GGCCAAGACC--GGACGTTGTTGAAATCCTTTACGCAACCGAAGATGGTTTCACTGCTCC 63
consensus_11110#2 TGGCGAGGGCGAAGGGGAGGTGGGAAAATTATTGGCAGCGGGAAAACTCCAAACAAGTCC 71
* * * * * ** * * *** * * * * ** ***
consensus_11110#0 CGAA--GGTGAAGAACCGGAAGAATTTTAGCTGGATCCTGCTTTTAACAACCCGGTACTC 898
consensus_11110#1 CGAA--GGTGAAGAACCGGAAGAATTTTAGCTGGATCCTGCTTTTAACAACCCGGTACTC 121
consensus_11110#2 CAACTCGATCAGCCACGCAATAGCATCTCATCAAATGCTAAACCCACAAGTCAAAAGCAA 131
* * * * * ** * * * ** ** * * * *
consensus_11110#0 CTAATGCCGATTTTAGGCAAATGTTCTTTATTAATCTTATCGA----TGATAGTAGTTGT 954
consensus_11110#1 CTAATGCCGATTTTAGGCAAATGTTCTTTATTAATCTTATCGA----TGATAGTAGTTGT 177
consensus_11110#2 GTAGTTACAACTTTGCGCACCAGTCAGTCTGGCGTTTCAGGAACTCCTACTAATAATAAT 191
** * * * *** *** ** * * * * * * ** ** * *
consensus_11110#0 AGTACTACTGTCTCAGTTCATTAGCACAATCTGCCTCCCATTATTTGAGTGCTGAAAATG 1014
consensus_11110#1 AGTACTACTGTCTCAGTTCATTAGCACAATCTGCCTCCCATTATTTGAGTGCTGAAAATG 237
consensus_11110#2 CATTATTCTGCTGGAGATAAT--GCAGAAGTGGCCATCC-TGAAGCAACAATTCGATCAG 248
* * *** ** * ** *** ** *** ** * * * * * *
consensus_11110#0 TTGATTTTATTTTTTGGCTTGTATGTATTTGTTAGCGACTTTATTCTGCTTGTAAACATT 1074
consensus_11110#1 TTGATTTTATTTTTTGCTTTGTATGTATTTGTTAGCGTCTTTATTCTGCTTGTAAACATT 297
consensus_11110#2 CTTACATTAGAGGCTGAACAAAACAAGACTACTATTGAAGGTCTACTTCGTGAAAGGGAT 308
* * *** ** * * ** * * * ** * ** ** *
consensus_11110#0 TTTCAGCCCCTTGGATTTCCATAAAACTATTATTATT-GTTACTATCATTAT-TAATGAA 1132
consensus_11110#1 TTCCAGCCCCTTGGATTTCCATAAAACTATTATTATT-GTTACTATCATTAT-TAATGAA 355
consensus_11110#2 TTCTA-CTTCAACAAGCTACGCAGCATTGAAATAATTTGTCAAGAAAACAGGANAGTAGA 367
** * * * * * * * * * ** *** ** * * * * * *
consensus_11110#0 CTACATTTTTGGACTTTCACTCTTACCTTAAATA-CAGTTTTTGCTTTTAGTTTACTCGA 1191
consensus_11110#1 CTACATTTTTGGACTTTCACTCTTACCTTAAATA-CAGTTTTTGCTTTTAGTTTACTCGA 414
consensus_11110#2 CTTGACTAAGAGTATCTTTGAAATCCTTTACGCAACCGAAGATGGGTTCACTGCNTCCGA 427
** * * * * * * * *** * * * ** ** * * ***
consensus_11110#0 TAAAACAACATCTGTCATCAAATCACTTATTGTCTGTTTTAATTTATTACAAAGTTCTCT 1251
consensus_11110#1 TAAAACAACATCTGTCATCAAATCACTTATTGTCTGTTTTAATTTATTACAAAGTTCTCT 474
consensus_11110#2 -AGGTGAAGAACCNGGAGAATNNTAGCTGGGATCTGCTTTA------------------- 467
* ** * * * * * * **** ****
consensus_11110#0 GCAAAGTTTTGGTTATCTGTGAAATTGAAGTACTCCGTTATATAAATATGCATATTGTAA 1311
consensus_11110#1 GCAAAGTTTTGGTTATCTGTGA-------------------------------------- 496
consensus_11110#2 ------------------------------------------------------------
consensus_11110#0 AGATTTTTGAACAAATCTTGCGTTTATATGTTCATATAGGCTCACGTGCCCATGTACCGG 1371
consensus_11110#1 ------------------------------------------------------------
consensus_11110#2 ------------------------------------------------------------
consensus_11110#0 ATTTTTTTCATAAAGAGGTTTTTGAACTTCTTTAGTTTACTACATTTCTATCCTTACAAT 1431
consensus_11110#1 ------------------------------------------------------------
consensus_11110#2 ------------------------------------------------------------
consensus_11110#0 AAATATGATAACTGATCAGCATACTTTGTTTGTTATGTAAAATGCTAACTTCACATACAG 1491
consensus_11110#1 ------------------------------------------------------------
consensus_11110#2 ------------------------------------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||