cluster # 11114

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Schistosoma mansoni
cluster # 11114 cluster # 11114 Sequences # 34 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11114#0 length = 492 sequences # 1

consensus_11114#1 length = 461 sequences # 32
consensus_11114#2 length = 442 sequences # 1

consensusID : consensus_11114#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 492
fasta sequence

                              [GGATCAAGCGTGGATGGATGAAATATCGTGTATTTTTATCAGATAAGCGCCTATTCTTTTACGATGTAAGTATTTATTTTTGAGAGTCTATATAAATAAACTGAAGATGTAGTTCGTATCTTTTGTTTCAGTCCCTGTTTACCTTAGTATCGTTTACACAGAAAATTTGTCAAAAAGCAAAACAAAATGGATTATTAGAGAGAAATTTATTTCCTGTTATAAGTATATGGTCTATTCGTATTCCCTACATAATAGGCACATCATTCAATCAAGTAATTCTAGCTCTTCCAATGAATAACTTTGCCTCATATTCATATTTACTTTTACCATTCTGTGATGTAATTAATTTTAGACTTATACTTGTACTAAATTTTCTTTAGTGTCGTCTACAATAATTTGCAAATTACTTTATTTCTATAGATAGCATTCATTTTTATTAGCTTAGTTTTTCAGCGAACGCCGATGCCTGTAAATTCTTTATTGAAAAAAGCA]

[+] EMBL CD069615             [GGATCAAGCGTGGATGGATGAAATATCGTGTATTTTTATCAGATAAGCGCCTATTCTTTTACGATGTAAGTATTTATTTTTGAGAGTCTATATAAATAAACTGAAGATGTAGTTCGTATCTTTTGTTTCAGTCCCTGTTTACCTTAGTATCGTTTACACAGAAAATTTGTCAAAAAGCAAAACAAAATGGATTATTAGAGAGAAATTTATTTCCTGTTATAAGTATATGGTCTATTCGTATTCCCTACATAATAGGCACATCATTCAATCAAGTAATTCTAGCTCTTCCAATGAATAACTTTGCCTCATATTCATATTTACTTTTACCATTCTGTGATGTAATTAATTTTAGACTTATACTTGTACTAAATTTTCTTTAGTGTCGTCTACAATAATTTGCAAATTACTTTATTTCTATAGATAGCATTCATTTTTATTAGCTTAGTTTTTCAGCGAACGCCGATGCCTGTAAATTCTTTATTGAAAAAAGCA]




>consensus_11114#0
GGATCAAGCGTGGATGGATGAAATATCGTGTATTTTTATCAGATAAGCGCCTATTCTTTT
ACGATGTAAGTATTTATTTTTGAGAGTCTATATAAATAAACTGAAGATGTAGTTCGTATC
TTTTGTTTCAGTCCCTGTTTACCTTAGTATCGTTTACACAGAAAATTTGTCAAAAAGCAA
AACAAAATGGATTATTAGAGAGAAATTTATTTCCTGTTATAAGTATATGGTCTATTCGTA
TTCCCTACATAATAGGCACATCATTCAATCAAGTAATTCTAGCTCTTCCAATGAATAACT
TTGCCTCATATTCATATTTACTTTTACCATTCTGTGATGTAATTAATTTTAGACTTATAC
TTGTACTAAATTTTCTTTAGTGTCGTCTACAATAATTTGCAAATTACTTTATTTCTATAG
ATAGCATTCATTTTTATTAGCTTAGTTTTTCAGCGAACGCCGATGCCTGTAAATTCTTTA
TTGAAAAAAGCA

consensusID : consensus_11114#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 32
consensus length = 461
fasta sequence

                              [TTCATAGTACAGATGCGGTTACAT-AGATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG-A-CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT-TTGATTCCACCTAGTTTGGGCATC-TTACTATAACTTTCAAAATCAGCACCAAAGCCGGGTGAACCATCAATACAATTCGAATTAGGCGCAGTACAAACAATATGTACAGACATGCGACACCGATGATGACACTTTAATTGACAATCTTGACACTGAACGCCTTGCCACTTCTGACCTAGTATCA]

[+] EMBL CD069329             [TTCATAGTACAGATGCGGTTACAT AGATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATCACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCA                                                                                                                                                                                ]
[+] EMBL CD069276             [            ATGCGGTTACATAAGATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGGCACCTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATACATGGAAATTTTGAAAAGTTGGCGATCACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCA                                                                                                                                                                                ]
[+] EMBL CD069134             [                         AGATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCA                                                                                                                                                                                ]
[+] EMBL CD069494             [                         AGATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCA                                                                                                                                                                                ]
[+] EMBL CD069207             [                         AGATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCA                                                                                                                                                                                ]
[+] EMBL CD069065             [                         AGATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTCAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCA                                                                                                                                                                                ]
[-] EMBL CD069299             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATGTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAA                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD069576             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGA   TT ATCCATCCACGT TTGATTCCACCTAG TTGGGCATC TTACTATA                                                                                                                                                        ]
[-] EMBL CD069101             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCACCTAGTTTGGGCATC T                                                                                                                                                               ]
[-] EMBL CD069312             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCACCTAGTTTGGGCATC                                                                                                                                                                 ]
[-] EMBL CD069544             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCACCTAGTTT GGCATC                                                                                                                                                                 ]
[-] EMBL CD069378             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCAACCATCCACGTGTTGATTCCAC                                                                                                                                                                               ]
[-] EMBL CD069202             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCAC                                                                                                                                                                               ]
[-] EMBL CD069505             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGAGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCAC                                                                                                                                                                               ]
[-] EMBL CD069190             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGATGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCAC                                                                                                                                                                               ]
[-] EMBL CD069524             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCGTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCAC                                                                                                                                                                               ]
[-] EMBL CD069280             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCAC                                                                                                                                                                               ]
[-] EMBL CD069084             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCAC                                                                                                                                                                               ]
[+] EMBL CD069278             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCA                                                                                                                                                                                ]
[+] EMBL CD069338             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCA                                                                                                                                                                                ]
[-] EMBL CD069551             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGT AAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCAC                                                                                                                                                                               ]
[-] EMBL CD069407             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGATGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCA                                                                                                                                                                                ]
[-] EMBL CD069427             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATACGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCA                                                                                                                                                                                ]
[+] EMBL CD069279             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTCAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCA                                                                                                                                                                                ]
[-] EMBL CD069571             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCC                                                                                                                                                                                 ]
[-] EMBL CD069435             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCC                                                                                                                                                                                 ]
[-] EMBL CD069569             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATcc                                                                                                                                                                                  ]
[-] EMBL CD069566             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACG  TTGATcc                                                                                                                                                                                  ]
[-] EMBL CD069471             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGAT                                                                                                                                                                                    ]
[-] EMBL CD069170             [                          GATACAGAAAATCCGGAACTACGTAAATCCACAATTCGACTTGG A CTGTTTGATTGGAACATGGAATTTGTGGACGTATGTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACGACATCGTAAAAGAATAGGCGCTTATCTG                                                                                                                                                                                                                          ]
[-] EMBL CD147964             [                                                                                  TGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCACCTAGTTTGGGCATCTTTAC ATCACTTTCAAAATCAGCACCAAAGCCGGGTGAACCATCAATACAATTCGAATTAGGCGCAGTACAAACAATATGTACAGACATGCGACACCGATGATGACACTTTAATTGACAATCTTGACACTGAACGCCTTGCCACTTCTGACCTAGTATCA]
[+] EMBL CD069625             [                                                                                                                                                                                    GCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATCCACGT TTGATTCCA                                                                                                                                                                                ]




>consensus_11114#1
TTCATAGTACAGATGCGGTTACATAGATACAGAAAATCCGGAACTACGTAAATCCACAAT
TCGACTTGGACTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGA
AACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCT
TCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACATCGTAAAAGAATAGGCGCTT
ATCTGATAAAAATACACGATATTTCATCCATCCACGTTTGATTCCACCTAGTTTGGGCAT
CTTACTATAACTTTCAAAATCAGCACCAAAGCCGGGTGAACCATCAATACAATTCGAATT
AGGCGCAGTACAAACAATATGTACAGACATGCGACACCGATGATGACACTTTAATTGACA
ATCTTGACACTGAACGCCTTGCCACTTCTGACCTAGTATCA

consensusID : consensus_11114#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 442
fasta sequence

                              [CATTAGTAAGATGCGGTTACCATAAGATACAGATCGGACTACGTAAATCCACAATTCGACTTGGACTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACCTTTATTTAAGTAAAAAAAAATAAACGAATAACACGATAAGTTGATGAGAAATTTTAGCTTGATAATGAATTTATTACTTAATACTATACTACAGTGAAGTATTCTTGGGTGAAAATAGGAAAAATAAGAAAGCTAACTTCTTAACACAAGACAGCAATCAGAACACTTGAAAGTTTTCGCATCTTTTTTTATTGTTAACTCCTGTGCTGACAGATGGAAATGACAAA]

[+] EMBL CD069587             [CATTAGTAAGATGCGGTTACCATAAGATACAGATCGGACTACGTAAATCCACAATTCGACTTGGACTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCACCTAAAGCTGCAATATTCGACGACTCCGAAACAACCTTTATTTAAGTAAAAAAAAATAAACGAATAACACGATAAGTTGATGAGAAATTTTAGCTTGATAATGAATTTATTACTTAATACTATACTACAGTGAAGTATTCTTGGGTGAAAATAGGAAAAATAAGAAAGCTAACTTCTTAACACAAGACAGCAATCAGAACACTTGAAAGTTTTCGCATCTTTTTTTATTGTTAACTCCTGTGCTGACAGATGGAAATGACAAA]




>consensus_11114#2
CATTAGTAAGATGCGGTTACCATAAGATACAGATCGGACTACGTAAATCCACAATTCGAC
TTGGACTGTTTGATTGGAACATGGAATTTGTGGACGTATTTAATGAACTCAAAGAAACAT
TATGACTATTTGATAAATGGAAATTTTGAAAAGTTGGAGATAACGAATTGCCGCTTCCAC
CTAAAGCTGCAATATTCGACGACTCCGAAACAACCTTTATTTAAGTAAAAAAAAATAAAC
GAATAACACGATAAGTTGATGAGAAATTTTAGCTTGATAATGAATTTATTACTTAATACT
ATACTACAGTGAAGTATTCTTGGGTGAAAATAGGAAAAATAAGAAAGCTAACTTCTTAAC
ACAAGACAGCAATCAGAACACTTGAAAGTTTTCGCATCTTTTTTTATTGTTAACTCCTGT
GCTGACAGATGGAAATGACAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11114#1      -----------------TTCATAGTACAGATGCGGTTACATAG-ATACAGAAAATCCGGA 42
consensus_11114#2      ------------------CATTAGTA-AGATGCGGTTACCATA-AGATACAGATC---GG 37
consensus_11114#0      GGATCAAGCGTGGATGGATGAAATATCGTGTATTTTTATCAGATAAGCGCCTATTCTTTT 60
                                             *       *    ***      *       *       

consensus_11114#1      ACTACGTAAATCCACAATTC---GACTTGGACTGTTTGATTGGAACATGGAATTTGTGGA 99
consensus_11114#2      ACTACGTAAATCCACAATTC---GACTTGGACTGTTTGATTGGAACATGGAATTTGTGGA 94
consensus_11114#0      ACGATGTAAGTATTTATTTTTGAGAGTCTATATAAATAAACTGAAGATGTAGTTCGT--A 118
                       ** * **** *    * **    ** *     *   * *   *** *** * ** **  *

consensus_11114#1      CGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGT 159
consensus_11114#2      CGTATTTAATGAACTCAAAGAAACATTATGACTATTTGATAAATGGAAATTTTGAAAAGT 154
consensus_11114#0      TCTTTTGTTTCAGTCCCTGTTTACCTTAGTATCGTTTACACAGAAAATTTGTCAAAAAGC 178
                         * **   * *   *      ** ***  *   ***    *    *  * *  ***** 

consensus_11114#1      TGGAGATAACGAATTGCCGCT------TCCACCTAAAGCTGCAA-TATTCGACGACTCCG 212
consensus_11114#2      TGGAGATAACGAATTGCCGCT------TCCACCTAAAGCTGCAA-TATTCGACGACTCCG 207
consensus_11114#0      AAAACAAAATGGATTATTAGAGAGAAATTTATTTCCTGTTATAAGTATATGGTCTATTCG 238
                          * * ** * ***            *  *  *   * *  ** ***  *     * **

consensus_11114#1      AAACAACATCGTAAAAGAATAGGCGCTTATCTGATAAAAATACACGATATTTCATCCATC 272
consensus_11114#2      AAACAACCTT-TATTTAAGTAA-----------AAAAAAATAAACGA-ATAACA-CGATA 253
consensus_11114#0      TATTCCCTACATAATAGGCACATCATTCAAT--CAAGTAATTCTAGCTCTTCCAATGAAT 296
                        *    *    **                      *  ***    *   *  **   *  

consensus_11114#1      CACGTT------TGATTCCACCTAGTTTGGGCATCTTACTATAACTTTCAAAATCAGCAC 326
consensus_11114#2      AG---T------TGATGAGA---AATTTTAGCTTGATA--ATGAATTTATTACTTAATAC 299
consensus_11114#0      AACTTTGCCTCATATTCATATTTACTTTTACCATTCTGTGATGTAATTAAT-TTTAGACT 355
                            *      *  *   *   * ***   * *  *   **    **     * *    

consensus_11114#1      CAAAGCCGGGTGAACCATCAATACAATTCGAATTAGGCGCAGTACAAACAATA-TGTACA 385
consensus_11114#2      TATACTACAGTGAAGTATTCTTGGG--TGAAAATAGGAAAAATAAGAAAGCTAACTTCTT 357
consensus_11114#0      TATACTTGTACTAAATTTTCTTTAG--TGTCGTCTACAATAATTTGCAAATTACTTTATT 413
                        * *        **   *   *     *            * *    *   **   *   

consensus_11114#1      GACATGCGACACCGATGAT----GACACTTTAA----TTGACAA-TCTTGACACTGAACG 436
consensus_11114#2      AACACAAGACAGCAATCAG----AACACTTGAAAGTTTTCGCATCTTTTTTTATTGTTAA 413
consensus_11114#0      TCTATA-GATAGCATTCATTTTTATTAGCTTAGTTTTTCAGCGAACGCCGATGCCTGTAA 472
                          *   ** * *  * *        *  * *     *   *                  

consensus_11114#1      CCTTGCCACTTCTGACCTAGTATCA---- 461
consensus_11114#2      CTCCTGTGCTGACAGATGGAAATGACAAA 442
consensus_11114#0      ATTCTTTATTGAAAAAAGCA--------- 492
                                *