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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11126#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 34 consensus length = 1498 fasta sequence
[CTTCGTCCACTTCCGCAACATTGGGTATCAACCTAGCATCGATAAAATCAGTTGCTGGTGTTTCTGCATCCGTACCCCCTATAATTCGTGCTAAATCTGGATACGTTAACACTTATTCTCCTGGAATTCTACCCGCTGTTCACAGCAAAGTAGGCTCCAATCTCCTCTCCTTGAATGGATCAACTGTACTAATAGAAGGTGTGGACCGAAAACAGAATGACCTCTCGTTTTTGAGCGATGATATCCGTCACCCCCCTATGTCACCTACACGTGACAATCCATTTTT-CCATCAGAAAAAGTAAAGGAAATATTAGAATCTCATGGCATAAAAACACTAACAGAAGAATCTATCGTGTCTCTCGCCCACGGTTTGCAAATATTCATCAAAAATCTTTTATCAAAGTTGAGGATTGTAGTATCACATCGTCTCGATCGTTTAGGCGAGGATTCTCGTTTGGTTCAAACAGATCACACTCGTGAACAATTGAGATTTCTTCAGAAGTTGGATGAACATGACCGAATGAGGCAATCGGAATTAGAAAAGGATCTAATTTTGAAAGCTGCAAAATCGCGTTCTCGAA-ACGAAGATCCTCATCAAATGCAGATGAGGGAAATGGCTCGACGGATAGCATCTGAAGATTATGAACGTGAGAAGCAACATCAAGCCAATCTTACAGCTCTTCACGCTATCGGCCCACAACGCAAGCGTCGTCTAGATACTTTAGATGAAATGGGAAACCCTATTTCAACAGATATTTTGGGAGCCTCTCTTTCAACAAGAGATGGTGTGACGAATTTGGTGAGTGCCCTACCTGCTTCTACTGCTAATCGCCTTTCTATTGTCAGTGCCAGTCGACTAGGTTTGGTAACATCAGGACCTAACCTAACGCAGCTCAGTTTAGAAGCTTTACCGGCAAATTCAAGCTCGTTGGTC-TCCAGTGTCGGTGGGACTGGTGATAGCGTGTCAAATACGTCTGGGTTTTCATTAGCACTCAGTCTCAGGGCACATCGTGCAACTCTCAGAGATATACAGGTCATACTTTCTCGCACACCGAGACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA-GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA-CAGTAGCCTAATTCGC-TAGGCATCTGGAGTTC--TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT-TTTCAT-AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
[+] EMBL CD165992 [CTTCGTCCACTTCCGCAACATTGGGTATCAACCTAGCATCGATAAAATCAGTTGCTGGTGTTTCTGCATCCGTACCCCCTATAATTCGTGCTAAATCTGGATACGTTAACACTTATTCCCCTGGAATTCTACCCGCTGTTCACAGCAAAGTAGGCTCCAATCTCCTCTCCTTGAATGGATCAACTGTACTAATAGAAGGTGTGGACCGAAAACAGAATGACCTCTCGTTTTTGAGCGATGATATCCGTCACCCCCCTATGTCACCTACACGTGACAATCCATTTTT CCATCAGAAAAAGTAA ]
[+] EMBL AI975721 [ AATTCGTGCTAAATCTGGATACGTTAACACTTATTCTCCTGGAATTCTACCCGCTGTTCACAGCAAAGTAGGCTCCAATCTCCTCTCCTTGAATGGATCAACTGTACTAATAGAAGGTGTGGACCGAAAACAGAATGACCTCTCGTTTTTGAGCGATGATATCCGTCACCCCCCTATGTCACCTACACGTGACAATCCATTTTTCCCATCAGAAAAAGTTAAGGAAATATTAGAATCTCATGGCATAAAAACACTAACAGAAGAATCTATCGTGTCTCTCGCCCACGGTTTGCAAATATTCATCAAAAATCTTTTATCAAAGTTGAGGATTGTAGTATCACATCGTCTCGATCGTTTAGGCGAGGATTCTCGTTT GTTCAAACAG ]
[+] EMBL CD166011 [ ACGCTAACACTTATTCTCCTGGAATTCTACCCGCTGTTCACAGCAAAGTAGGCTCCAATCTCATCTCCTTGAATGGATCAACTG ]
[+] EMBL CD116913 [ AAGAATCTATCGTGTCTCTCGCCCACGGTTTGCAAATATTCATCAAAAATCTTTTATCAAAGTTGAGGATTGTAGTATCACATCGTCTCGATCGTTTAGGCGAGGATTCTCGTTTGGTTCAAACAGATCACACTCGTGAACAATTGAGATTTCTTCAGAAGTTGGATGAACATGACCGAATGAGGCAATCGGAATTAGAAAAGGATCTAATTTTGAAAGCTGCAAAATCGCGTTCTCGAA ACGAAGATCCTCATCAAATGCAGATGAGGGAAATGGCTCGACGGATAGCATCTGAAGATTATGAACGTGAGAAGCAACATCAAGCCAATCTTACAGCTCTTCACGCTATCGGCCCACAACGCAAGCGTCGTCTAGATACTTTAGATGAAATGGGAAACCCTATTTCAACAGATATTTTGGGAGCCTCTCTTTCAACAAGAGATGGTGTGACGAATTTGGTGAGTGCCCTACCTGCTTCTACTGCTAATCGCCTTTCTATTGTCAGTGCCAGTCGACTAGGTTTGGTAACATCAGGACCTAACCTAACGCAGCTCAGTTTAGAAGCTTTACCGGCAAATTCAAGCTCGTTGGTC TCCAGTGT ]
[+] EMBL CD116620 [ AAGAATCTATCGTGTCTCTCGCCCACGGTTTGCAAATATTCATCAAAAATCTTTTATCAAAGTTGAGGATTGTAGTATCACATCGTCTCGATCGTTTAGGCGAGGATTCTCGTTTGGTTCAAACAGATCACACTCGTGAACAATTGAGATTTCTTCAGAAGTTGGATGAACATGACCGAATGAGGCAATCGGAATTAGAAAAGGATCTAATTTTGAAAGCTGCAAAATCGCGTTCTCGAA ACGAAGATCCTCATCAAATGCAGATGAGGGAAATGGCTCGACGGATAGCATCTGAAGATTATGAACGTGAGAAGCAACATCAAGCCAATCTTACAGCTCTTCACGCTATCGGCCCACAACGCAAGCGTCGTCTAGATACTTTAGATGAAATGGGAAACCCTATTTCAACAGATATTTTGGGAGCCTCTCTTTCAACAAGAGATGGTGTGACGAATTTGGTGAGTGC ]
[-] EMBL CD126493 [ TCGGAATTAGAAAAGGATCTAATTTTGAAAGCTGCAAAATCGCGTTCTCGAA ACGAAGATCCTCATCAAATGCAGATGAGGGAAATGGCTCGACGGATAGCATCTGAAGATTATGAACGTGAGAAGCAACATCAAGCCAATCTTACAGCTCTTCACGCTATCGGCCCACAACGCAAGCGTCGTTTAGATACTTTAGATGAAATGGGAAACCCTATTTCAACAGATATTTTGGGAGCCTCTCTTTCAACAAGAGATGGTGTGACGAATTTGGTGAGTGCCCTACCTGCTTCTACTGCTAATCGCCTTTCTATTGTCAGTGCCAGTCGACTAGGTTTGGTAACATCAGGACCTAACCTAACGCAGCTCAGTTTAGAAGCTTTACCGGCAAATTCAAGCTCGTTGGTCTTCCAGTGTCGGTGGGAC ]
[+] EMBL CD156611 [ gatTCGAG TNTTGAATACGAAGATNCTNATCAAATGCAGATGAGGGAAATGGCTCGACGGATAGCATCTGAAGATTATGAACGTGAGAAGCAACATCAAGCCAATCTTACAGCTCTTCACGCTATCGGCCCACAACGCATTTGTCGTCTAGATACTTTAGATGAAATGGGAAACCCTATTTCAACAGATCTTTTGGGAGCCTCTCTTTCAACCCCCCATGGTGTGACGAATTTGGCGAGTGCCCTACCTGCTTCTACTGCTAATCGCCTTTCTATTGTCAGTGCCAGCCGACTAGGTTTGGTAACATCAGGACCTAACCTAACGCAGCTCAGTTTACAAGCTTTACCGGCAAATTCAAGCTCGTTGGTC TCCAGTGTCGGCGGGACTGGCGA ]
[+] EMBL CD200957 [ TATTTCAACAGATATTTTGGGAGCCTCTCTTT AACAAGAGATGGTGTGACGAATTTGGTGAGTGCCCTACCTGCTTCTACTGCTAATTGCCTTTCTATTGTCAGTGCCAGTCGACTAGGTTTGGTAACATCAGGACCTAACCTAACGCAGCTCAGTTTAGAAGCTTTACCGGCAAATTCAAGCTCGTTGGTC TCCAGTGTCGGTGGGACTGGTGATAGCGTGTCAAATACGTCTGGGTTTTCATTAGCACTCAGTCTCAGGGCACATCGTGCAACTCTCAGAGATATACAGGTCATACTTTCTCGCACACCGAGACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATATG ]
[+] EMBL CD078268 [ CGCAGCTCAGTTTAGAAGCTTTACCGGCAAATTCAAGCTCGTTGGTC TCCAGTGTCGGTGGGACTGGTGATAGCGTGTCAAATACGTCTGGGTTTTCATTAGCACTCAGTCTCAGGGCACATCGTGCAACTCTCAGAGATATACAGGTCATACTTTCTCGCACACCGAGACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTCTATATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAG AAATAATANACCTGNTATTTCT ]
[+] EMBL CD078350 [ CGCAGCTCAGTTTAGAAGCTTTACCGGCAAATTCAAGCTCGTTGGTC TCCAGTGTCGGTGGGACTGGTGATAGCGTGTCAAATACGTCTGGGTTTTCATTAGCACTCAGTCTCAGGGCACATCGTGCAACTCTCAGAGATATACAGGTCATACTTTCTCGCACACCGAGACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTCTATATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGCACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGCTATCTCT ]
[-] EMBL AI068202 [ TAGAAGCTTTACCGGCAAATTCAAGCTCGTTGGTC TCCAGTGTCGGTGGGACTGGTGATAGCGTGTCAAATACGTCTGGGTTTTCATTAGCACTCAGTCTCAGGGCACATCGTGCAACTCTCAGAGATATACAGGTCATACTTTCTCGCACACCGAGACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
[-] EMBL AI067178 [ aCCAGTGTCGGTGGGACTGGTGATAGCGTGTCAAATACGTCTGGGTTTTCATTAGCATTCAGTCTCAGGGCACATCGTGCAACTCTCAGAGATATACAGGTCATACTTTCTCGCACACCGAGACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
[-] EMBL AI067248 [ CTGGTGATAGCGTGTCAAATACGTCTGGGTTTTCATTAGCACTCAGTCTCAGGGCACATCGTGCAACTCTCAGAGATATACAGGTCATACTTTCTCGCACACCGAGACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
[-] EMBL CD072910 [ GTGTCAAATACGTCTGGGTTTTCATTAGCACTCAGTCTCAGGGCACATCGTGCAACTCTCAGAGATATACAGGTCATACTTTCTCGCACACCGAGACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTCTATATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
[-] EMBL AI068256 [ ACTTTCTCGCACACCGAGACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
[-] EMBL AI068353 [ ACCGAGACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
[-] EMBL AI067744 [ GAGACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
[-] EMBL AI067795 [ ACTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTATGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATGTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
[-] EMBL AI068002 [ CTTCGTCGTACACGTACTTACTATAGGACGTATTGGCGCTCTCAGCCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTAAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTA ]
[-] EMBL AI067152 [ ATTGGCGCTCTCAGCCTTAAGGAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAGCTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGCTTAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
[-] EMBL AI066997 [ CCTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAG TTTCACCAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
[-] EMBL AI067605 [ CTTAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
[-] EMBL AI068112 [ CTTAA GAGTCTTTTCTGTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTTATTTCATGAAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
[-] EMBL AI067281 [ TAA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
[-] EMBL AI068131 [ AA GAGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
[-] EMBL AI067659 [ AGTCTTTTCTTTGTTCCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
[-] EMBL AI068288 [ CCTTATTTCTATTTTTACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATNTGTTGGCTAATTTTCTTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
[-] EMBL AI068142 [ TTCTATTTTTACAGTGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGTTAATTTTCCTAAGATCATTTACGTTCCCAACTTAAGTTGTATCATAAAATCTGTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TGGGCATATGGAGTTC TATATATATATATATAGGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTGTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCATGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
[-] EMBL AI068281 [ GCGACTTGATTTCTGATTGTAATATGATTTAACTATGTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
[-] EMBL AI067454 [ ATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTCTAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
[-] EMBL AI976892 [ TCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAAGATCATTTACGTTCACAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATACGTACACNCCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTAT ]
[-] EMBL AI067705 [ ATCATAAAATCTTTGTACATTATGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTC TATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTGTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
[-] EMBL AI067089 [ TGAGTTTTCA CAGTAGCCTAATTCGC TAGGCATCTGGAGTTCTATATATATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
[-] EMBL AI066967 [ ATATATATATATACGTACACACCGTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAATGTGAGATTCCATGTATTT TTTCAT AAAGCCTGCACATTTACCAATTTCATGTATACTTCGTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT]
consensusID : consensus_11126#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 453 fasta sequence
[GAAGCAACATCAAGCCAATCTTACAGCTCTTCACGCTATCGGCCCACAACGCAAGCGTCGTCTAGATACTTTAGATGAAATGGGAAACCCTATTTCAACAGATATTTTGGGAGCCTCTCTTTCAACAAGAGATGGTGTGACGAATTTGGTGAGTGCCCTACCTGCTTCTACTGCTAATCGCCTTTCTATTGTCAGTGCAGTCGACTAGGTTTGTTACATCAGGACCTAACCTAACGCAGCTCAGTTTAGAAGCTTTACGGCAAATTCAAGCCTGTTGGCTCCCAAGTGTCGTTGGGACTGGTAATAGCGTGTCAATAAGTCTGGGTTTTCATAAGCACCAATTCTAGGGCACATGTGATCTCTCAGAGATATAGGGCTATCTTTCTCGAACGCCGAATTTCGTGTACTGTTTTATAGAGCGTTTGGCGCCTCGCATTAGNGTTTTTCTTGCTC]
[+] EMBL AI618796 [GAAGCAACATCAAGCCAATCTTACAGCTCTTCACGCTATCGGCCCACAACGCAAGCGTCGTCTAGATACTTTAGATGAAATGGGAAACCCTATTTCAACAGATATTTTGGGAGCCTCTCTTTCAACAAGAGATGGTGTGACGAATTTGGTGAGTGCCCTACCTGCTTCTACTGCTAATCGCCTTTCTATTGTCAGTGCAGTCGACTAGGTTTGTTACATCAGGACCTAACCTAACGCAGCTCAGTTTAGAAGCTTTACGGCAAATTCAAGCCTGTTGGCTCCCAAGTGTCGTTGGGACTGGTAATAGCGTGTCAATAAGTCTGGGTTTTCATAAGCACCAATTCTAGGGCACATGTGATCTCTCAGAGATATAGGGCTATCTTTCTCGAACGCCGAATTTCGTGTACTGTTTTATAGAGCGTTTGGCGCCTCGCATTAGNGTTTTTCTTGCTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11126#0 CTTCGTCCACTTCCGCAACATTGGGTATCAACCTAGCATCGATAAAATCAGTTGCTGGTG 60
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 TTTCTGCATCCGTACCCCCTATAATTCGTGCTAAATCTGGATACGTTAACACTTATTCTC 120
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 CTGGAATTCTACCCGCTGTTCACAGCAAAGTAGGCTCCAATCTCCTCTCCTTGAATGGAT 180
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 CAACTGTACTAATAGAAGGTGTGGACCGAAAACAGAATGACCTCTCGTTTTTGAGCGATG 240
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 ATATCCGTCACCCCCCTATGTCACCTACACGTGACAATCCATTTTTCCATCAGAAAAAGT 300
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 AAAGGAAATATTAGAATCTCATGGCATAAAAACACTAACAGAAGAATCTATCGTGTCTCT 360
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 CGCCCACGGTTTGCAAATATTCATCAAAAATCTTTTATCAAAGTTGAGGATTGTAGTATC 420
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 ACATCGTCTCGATCGTTTAGGCGAGGATTCTCGTTTGGTTCAAACAGATCACACTCGTGA 480
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 ACAATTGAGATTTCTTCAGAAGTTGGATGAACATGACCGAATGAGGCAATCGGAATTAGA 540
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 AAAGGATCTAATTTTGAAAGCTGCAAAATCGCGTTCTCGAAACGAAGATCCTCATCAAAT 600
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 GCAGATGAGGGAAATGGCTCGACGGATAGCATCTGAAGATTATGAACGTGAGAAGCAACA 660
consensus_11126#1 ---------------------------------------------------GAAGCAACA 9
*********
consensus_11126#0 TCAAGCCAATCTTACAGCTCTTCACGCTATCGGCCCACAACGCAAGCGTCGTCTAGATAC 720
consensus_11126#1 TCAAGCCAATCTTACAGCTCTTCACGCTATCGGCCCACAACGCAAGCGTCGTCTAGATAC 69
************************************************************
consensus_11126#0 TTTAGATGAAATGGGAAACCCTATTTCAACAGATATTTTGGGAGCCTCTCTTTCAACAAG 780
consensus_11126#1 TTTAGATGAAATGGGAAACCCTATTTCAACAGATATTTTGGGAGCCTCTCTTTCAACAAG 129
************************************************************
consensus_11126#0 AGATGGTGTGACGAATTTGGTGAGTGCCCTACCTGCTTCTACTGCTAATCGCCTTTCTAT 840
consensus_11126#1 AGATGGTGTGACGAATTTGGTGAGTGCCCTACCTGCTTCTACTGCTAATCGCCTTTCTAT 189
************************************************************
consensus_11126#0 TGTCAGTGCCAGTCGACTAGGTTTGGTAACATCAGGACCTAACCTAACGCAGCTCAGTTT 900
consensus_11126#1 TGTCAGTGC-AGTCGACTAGGTTTGTTA-CATCAGGACCTAACCTAACGCAGCTCAGTTT 247
********* *************** ** *******************************
consensus_11126#0 AGAAGCTTTACCGGCAAATTCAAGCTCGTTGGTCTCCA-GTGTCGGTGGGACTGGTGATA 959
consensus_11126#1 AGAAGCTTTAC-GGCAAATTCAAGCCTGTTGGCTCCCAAGTGTCGTTGGGACTGGTAATA 306
*********** ************* ***** *** ****** ********** ***
consensus_11126#0 GCGTGTCAAATACGTCTGGGTTTTCATTAGCACTCAGTCTCAGGGCACATCGTGCAACTC 1019
consensus_11126#1 GCGTGTCAA-TAAGTCTGGGTTTTCATAAGCAC-CAATTCTAGGGCACAT-GTG-ATCTC 362
********* ** ************** ***** ** * ********* *** * ***
consensus_11126#0 TCAGAGATATACAGGTCATACTTTCTCGCACACCGAGACTTCGTCGTACACGTACTTACT 1079
consensus_11126#1 TCAGAGATATA-GGGCTAT-CTTTCTCGAACGCCGA-ATTTCGT-GTAC---TGTTT--T 413
*********** ** ** ******** ** **** * ***** **** * ** *
consensus_11126#0 ATAGGACGTATTGGCGCTCTCAGCCTTAAGAGTCTTTTCTTTGTTCCTTATTTCTATTTT 1139
consensus_11126#1 ATAGAGCGT-TTGGCGCCTC--GCATTA---GNGTTTTTCTTGCTC-------------- 453
**** *** ******* ** *** * **** *** **
consensus_11126#0 TACAGCGACTTGATTTCTGATTGTAATATGATTTAACTATTTGTTGGCTAATTTTCCTAA 1199
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 GATCATTTACGTTCCCAACCTAACTTGTATCATAAAATCTTTGTACATTATGAGTTTTCA 1259
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 CAGTAGCCTAATTCGCTAGGCATCTGGAGTTCTATATATATATATATATACGTACACACC 1319
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 GTAATATCTTACTATTGTATAAAATGTGATGTTAGCTTCAGATTACTTTTCTCTACTAAA 1379
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 TGTGAGATTCCATGTATTTTTTCATAAAGCCTGCACATTTACCAATTTCATGTATACTTC 1439
consensus_11126#1 ------------------------------------------------------------
consensus_11126#0 GTTCGCTGTACATAATTTTCGATTATCCTTTTCAGAAAATAATAAACCTGTTATTTCTT 1498
consensus_11126#1 -----------------------------------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||