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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11138#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 30 consensus length = 1075 fasta sequence
[ACTTCTGAGCTCACCATACACCAACCAGTCTATTTTTTGCCTACATCTACCAGTGTTCTGTTACCGCCGTCCAGAATGTCTTCGACATTTACTGTTGGAAAAACATCTCTTAACGATTGACCTCAATATGAAGAGTAATTCGTGTTTAAGAAGTAATTTGCGGGAATTCTAATCATAATTCTCAAAAATATCAGCATTATGCTGTCTGTCATACTGTGTCTTTGTCTGGGTCTTTTGTATATCCCAATAAAAATGCCAAAGAGTAAGTCCATTGAAGCACGTCCAAGGAAACGTAAGCAAAGTCAAAGAATTGAGGAGCTTACTAATTCAGTTTCTGAACATCCTAAACACGAAGTAAATCGCATATCACACTTCTCAGACGGCTTACGCCACTCAAAACCCAGAAGCCGTGTTGGCCGTGAGCGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTCGTACTTTTGGAACACAACAAATTGTGGACACCCATCATATTATCACGATATCTTTTGTCAAACCGTCTTCTGACTTCATTGGGAGTGACTGGACAGTAACAATTTCGTCAGGTGCGCGGAATCGTACTTCTATGGAATATCCATTGTCGGTGATTGTCTACTCTTATTATCCTGGTGATAAAAATGACTTCTTCATCGAACCAGTCATTTCGAATAAGAAAATTACAGGATTACAAGGTTGTTCAATGGGATCGAGTGATTTTCATATTTGAT]
[+] EMBL CD128907 [ACTTCTGAGCTCACCATACACCAACCAGTCTATTTTTTGCCTACATCTACCAGTGTTCTGTTACCGCCGTCCAGAATGTCTTCGACATTTACTGTTGGAAAAACATCTCTTAACGATTGACCTCAATATGAAGAGTAATTCGTGTTTAAGAAGTAATTTGCGGGAATTCTAATCATAATTCTCAAAAATATCAGCATTATGCTGTCTGTCATACTGTGTCTTTGTCTGGGTCTTTTGTATATCCCAATAAAAATGCCAAAGAGTAAGTCCATTGAAGCACGTCCAAGGAAACGTAAGCAAAGTCAAAGAATTGAGGAGCTTACTAATTCAGTTTCTGAACATCCTAAACACGAAGTAAATCGCATATCACACTTCTCAGACGGCTTACGCCACTCAAAACCCAGAAGCCGTGTTGGCCGTGAGCGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCT ]
[+] EMBL CD162813 [ TAATTCGTGTTTAAGAAGTAATTTGCGGGAATTCTAATCATAATTCTCAAAAATATCAGCATTATGCTGTCTGTCATACTGTGTCTTTGTCTGGGTCTTTTGTATATCCCAATAAAGATGCCAAAGAGTAAGTCCATTGAAGCACGTCCAAGGAAACGTAAGCAAAGTCAAAGAATTGAGGAGCTTACTAATTCAGTTTCTGAACATCCTAAACACGAAGTAAATCACATATCACACTTCTCAGACGGCTTACGCCACTCAAAACCCAGAAGCCGTGTTGGCCGTGAGCGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATC ]
[+] EMBL CD059490 [ GCGGTCATCCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTCTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTAC ]
[+] EMBL CD059497 [ CGGCCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGGTCTAAGCTAC ]
[+] EMBL CD059606 [ CGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGACCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACTACTGG ]
[+] EMBL CD059493 [ CGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGG ]
[+] EMBL CD059611 [ CGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTAC ]
[+] EMBL CD059495 [ CGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTAC ]
[+] EMBL CD059408 [ CGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTAC ]
[+] EMBL CD059584 [ CGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTAC ]
[+] EMBL CD059626 [ CGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAA TTATTTTGG ATGAAACATAGAAGCCCC ACTCTCTTTTGTT GGGTTATGTGGAC ATCCAAGATCCAGAAAA TTTGCCTACCGCC CTCATGTGATC ATTTGATGGGGTTCTAAGCTAC ]
[+] EMBL CD059614 [ CGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAAAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGAC ]
[+] EMBL CD059602 [ CGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGGCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGA ]
[-] EMBL CD059554 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTT ]
[-] EMBL CD059485 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAAC ]
[-] EMBL CD059585 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACA ]
[-] EMBL CD059362 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTCG ]
[-] EMBL CD059479 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTCG ]
[-] EMBL CD059430 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTATAAGCTACA ]
[-] EMBL CD059568 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTTTAAGCTACA ]
[-] EMBL CD059570 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTCG ]
[-] EMBL CD059618 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTCG ]
[-] EMBL CD059617 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTCG ]
[-] EMBL CD059624 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAAT ]
[-] EMBL CD059338 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGCAGCATAGAAGCCCCAACTCTCTTTTGTTTGGGGTCATGTGGACAATCC ]
[-] EMBL CD059601 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTCG ]
[-] EMBL CD059571 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTCG ]
[-] EMBL CD059326 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATG ]
[-] EMBL CD059527 [ GGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTGATTACTCCACTTCATCTACGTAAAGTAATATC ]
[+] EMBL AI977488 [ AAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGCAACACGATGGTCGTACTTTTGGAACACAACAAATTGTGGACACCCATCATATTATCACGATATCTTTTGTCAAACCGTCTTCTGACTTCATTGGGAGTGACTGGACAGTAACAATTTCGTCAGGTGCGCGGAATCGTACTTCTATGGAATATCCATTGTCGGTGATTGTCTACTCTTATTATCCTGGTGATAAAAATGACTTCTTCATCGAACCAGTCATTTCGAATAAGAAAATTACAGGATTACAAGGTTGTTCAATGGGATCGAGTGATTTTCATATTTGAT]
consensusID : consensus_11138#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 388 fasta sequence
[GCTTACAGGGTTTCTCTCTCTCCACTACTTTCTCTCTACCTATCAAAGGGGTTCACTGTGAACGTGTGATACAGAGCGGAGAATCTCAAATTATGGGGAGATGCTGTGCCCTGTGTAGAAGAGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAGAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTC]
[+] EMBL CD059573 [GCTTACAGGGTTTCTCTCTCTCCACTACTTTCTCTCTACCTATCAAAGGGGTTCACTGTGAACGTGTGATACAGAGCGGAGAATCTCAAATTATGGGGAGATGCTGTGCCCTGTGTAGAAGAGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATATCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAGAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTC]
consensusID : consensus_11138#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 341 fasta sequence
[CGGTCATTCCTAACAGATTTCCACATTGTAA-ACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAATTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTC]
[+] EMBL CD059524 [CGGTCATTCCTAACAGATTTCCACATTGTAA ACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCTTGCCTTTCGTCAAGTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAATTTGTTTTGGGGAAGTTATCGTCCTGGAATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTTGGAACACGATGGTC]
[-] EMBL CD059502 [CGGTCATTCCTAACAGATTTCCACATTGTAAGACAAAGTTCCAAAGTGGCTCATTTTATCTTTCATATATCTGGGGATCTTAATTTTTTTGGTG ]
[-] EMBL CD059518 [ GGTCATTCCTAACAGATTTCCGCATCGTAA ACAAAGTCCCAAAGTGGCTCATTTTATCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGAAGCTTGCCTTTCGTCAAGTGATGGTATGGAATCAGGCAAga ]
[-] EMBL CD059488 [ CAACTCTCTTTTNGTTGGGGTTATGTGGACAATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTAAGCTACAACTGGTT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11138#0 ACTTCTGAGCTCACCATACACCAACCAGTCTATTTTTTGCCTACATCTACCAGTGTTCTG 60
consensus_11138#2 ------------------------------------------------------------
consensus_11138#1 ------------------------------------------------------------
consensus_11138#0 TTACCGCCGTCCAGAATGTCTTCGACATTTACTGTTGGAAAAACATCTCTTAACGATTGA 120
consensus_11138#2 ------------------------------------------------------------
consensus_11138#1 ------------------------------------------------------------
consensus_11138#0 CCTCAATATGAAGAGTAATTCGTGTTTAAGAAGTAATTTGCGGGAATTCTAATCATAATT 180
consensus_11138#2 ------------------------------------------------------------
consensus_11138#1 ------------------------------------------------------------
consensus_11138#0 CTCAAAAATATCAGCATTATGCTGTCTGTCATACTGTGTCTTTGTCTGGGTCTTTTGTAT 240
consensus_11138#2 ------------------------------------------------------------
consensus_11138#1 ------------------------------------------------------------
consensus_11138#0 ATCCCAATAAAAATGCCAAAGAGTAAGTCCATTGAAGCACGTCCAAGGAAACGTAAGCAA 300
consensus_11138#2 ------------------------------------------------------------
consensus_11138#1 ------------------------------------------------------------
consensus_11138#0 AGTCAAAGAATTGAGGAGCTTACTAATTCAGTTTCTGAACATCCTAAACACGAAGTAAAT 360
consensus_11138#2 ------------------------------------------------------------
consensus_11138#1 ------------------------------------------------------------
consensus_11138#0 CGCATATCACACTTCTCAGACGGCTTACGCCACTCAAAACCCAGAAGCCGTGTTGGCCGT 420
consensus_11138#2 ------------------------------------------------------------
consensus_11138#1 ----------------------------------------------------------GC 2
consensus_11138#0 GAGCGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTA 480
consensus_11138#2 ---CGGTCATTCCTAACAGATTTCCACATTGTAAACAAAGTTCCAAAGTGGCTCATTTTA 57
consensus_11138#1 TTACAGG-GTTTCTCTCTCTCCACTACTTTCTCT-CTACCTATCAAAGGGGTTCACTGTG 60
* * ** ** * * ** ** * * * * ***** ** *** * *
consensus_11138#0 ----TCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCT-TGCCTTTCGTC-AA 534
consensus_11138#2 ----TCTTTCATATATTTGGGGATCTTAATTTTTTTGGTGATGCT-TGCCTTTCGTC-AA 111
consensus_11138#1 AACGTGTGATACAGAGCGGAGAATCTCAAATTATGGGGAGATGCTGTGCCCTGTGTAGAA 120
* * * * * * * **** ** ** * ** ****** **** * ** **
consensus_11138#0 GTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATA 594
consensus_11138#2 GTGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAA------ 165
consensus_11138#1 GAGATGGTATGGTATCAGGCAAAACAAGTTATTACTCCACTTCATCTACCTAAAGTAATA 180
* ****************************************************
consensus_11138#0 TCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGA 654
consensus_11138#2 --------------------------------TTTGTTTTGGGGAAGTTATCGTCCTGGA 193
consensus_11138#1 TCGGATGCTTCATTGCATGAACGATCTCATAGTTTGTTTTGGGGAAGTTATCGTCCTGGA 240
****************************
consensus_11138#0 ATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACA 714
consensus_11138#2 ATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACA 253
consensus_11138#1 ATTTATTTTGGTATGAAACATAGAAGCCCCAACTCTCTTTTGTTTGGGGTTATGTGGACA 300
************************************************************
consensus_11138#0 ATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTA 774
consensus_11138#2 ATCCAAGATCCAGAAAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTA 313
consensus_11138#1 ATCCAAGATCCAGAGAATTTTGCCTACCGCCACTCATGTGATCAATTTGATGGGGTTCTA 360
************** *********************************************
consensus_11138#0 AGCTACAACTGGTTGGAACACGATGGTCGTACTTTTGGAACACAACAAATTGTGGACACC 834
consensus_11138#2 AGCTACAACTGGTTGGAACACGATGGTC-------------------------------- 341
consensus_11138#1 AGCTACAACTGGTTGGAACACGATGGTC-------------------------------- 388
****************************
consensus_11138#0 CATCATATTATCACGATATCTTTTGTCAAACCGTCTTCTGACTTCATTGGGAGTGACTGG 894
consensus_11138#2 ------------------------------------------------------------
consensus_11138#1 ------------------------------------------------------------
consensus_11138#0 ACAGTAACAATTTCGTCAGGTGCGCGGAATCGTACTTCTATGGAATATCCATTGTCGGTG 954
consensus_11138#2 ------------------------------------------------------------
consensus_11138#1 ------------------------------------------------------------
consensus_11138#0 ATTGTCTACTCTTATTATCCTGGTGATAAAAATGACTTCTTCATCGAACCAGTCATTTCG 1014
consensus_11138#2 ------------------------------------------------------------
consensus_11138#1 ------------------------------------------------------------
consensus_11138#0 AATAAGAAAATTACAGGATTACAAGGTTGTTCAATGGGATCGAGTGATTTTCATATTTGA 1074
consensus_11138#2 ------------------------------------------------------------
consensus_11138#1 ------------------------------------------------------------
consensus_11138#0 T 1075
consensus_11138#2 -
consensus_11138#1 -
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||