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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11140#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 35 consensus length = 1388 fasta sequence
[GATCCCTGCAACTTTAAATTGTTGTATCCCAAAGAAAATGGTTTTACTCAATCGATATTATGGAATTCTAAACATTTTAATGATAATAAAAGTTGCAGTCAGTTTTCTCATCCATTTAACAATGTTTCTGATGATCGTCATCGTCGTACATCTGGTCCAGGCATGCAGAATAAA-TAACAAGTGAACATAGTAGCTTGGAAAATGTATATCATGCTAACAGTGTCCCTTCCAGTTATCTAACTATCAATACTTCACCAATCAATTCATTGATAGACACTTCCCAAGGCCAGTATACATTTTCAGATAACTGGTGGGATAATCCTTCAGCATCACAAATTGTAGCTGACCTTTTGAGGGAAACACAACTTTCAGTTTCAGCTAACACTAGTATTCCTCCTAAGTCAGCATTATACCAGCCATGGCAATACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCAAAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC-ACATGATCCCG-CAGTATT-AAAAAAGAAACCTGCTGCATATTTAAGAGCATCATATAGTCAA-GGAAATGTTGC-TTTTGTTCAGCTTG-AAAGT-AA-TTCAAATAT-GAAACCGAATAATTCAAACAACCAACTAGACAAATCTCAGCAGTCACCTCTTCCGTGTTCAAACAGCAAGTCATGTAATCAAAAAGTCAAATCAAACGACACTACTGGATCATCTCCAGACAATCGTTCAGAATGGAATAATACACACGCCAAGTCAAATCGTTGTCATCACCCACCAAGGCGTAATCGACGTTATATATCGAAGAGCCTTAGTGTTTGCATGGATGGTACAACAACAAACAATCCAGTCACTGGTATACTAAAAGAGGGAATTTCAATAAATCTTCATACTAATAAAATTAACGAACCTAAAAATGAGTTTATTACATCAAACTGGCTACTGTTGCCCGATGAATTATGGCTTGAAGTACTCCGATATTTAAGTCCAGTTGATCGTGTACGGGTTGCTCAAACTTGTCGACATTTGTCTAGACTTTCAATGGATCGTTCATTATGGCGAGTCATTCATCTTCATCGACAACACCATTTGACTGATGCAGATTTAGTGAGAATTGGAAATCTTAAACCAAAAGAATTACGTTTCACTTATTGTCGTGGTGATAGCCTAACTGCTACAGGGTTAAAACGCATGTTTCTA]
[-] EMBL CD160052 [GATCCCTGCAACTTTAAATTGTTGTATCCCAAAGAAAATGGTTTTACTCAATCGATATTATGGAATTCTAAACATTTTAATGATAATAAAAGTTGCAGTCAGTTTTCTCATCCATTTAACAATGTTTCTGATGATCGTCATCGTCGTACATCTGGTCCAGGCATGCAGAATAAATTAACAAGTGAACATAGTAGCTTGGAAAATGTATATCATGCTAACAGTGTCCCTTCCAGTTATCTAACTATCAATACTTCACCAATCAATTCATTGATAGACACTTCCCAAGGCCAGTATACATTTTCAGATAACTGGTGGGATAATCCTTCAGCATCACAAATTGTAGCTGACCTTTTGAGGGAAACACAACTTTCAGTTTCAGCTAACACTAGTATTCCTCCTAAGTCAGCATTGTACCAGCCATGGCAATACCAAGAAAT ]
[+] EMBL CD190033 [ gtacttgA TAACAAGTGATCATAGTAGCTGGGAAAATGTATATCATGCTAACAGTGTCCCTTCCAGTTATCTAACTATCAATACTTCACCAATCAATTCATTGATAGACACTTCCCAAGGCCAGTATACATTTTCAGATAACTGGTGGGATAATCCTTCAGCATCACAAATTGTAGCTGACCTTTTGAGGGAAACACAACTTTCAGTTTCAGCTAACACTAGTATTCCTCCTAAGTCAGCATTATACCAGCCATGGCAATACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCA ]
[+] EMBL CD198902 [ caggATACCAGCCATGGCAATACCAAGAAGTGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGGGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCAAAATTGCAACTCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGTATT AAAAAAGAAACCTGCTGCATATTTAAGAGCATCATATAGTCAA GGAAATGTTGC TTTTGTTCAGCTTG g ]
[+] EMBL CD147017 [ ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCAAAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGTATT AAAAAAGAAACCTGCTGCATATTTAAGAGCATCATATAGTCAA GGAAATGTTGC TTTTGTTCAGCTTG AAAGT AA TTCAAATAT GAAACCGAATAATTCAAACAACCAACTAGACAAATCTCAGCAGTCACCTCTTCCGTGTTCAAACAGCAAGTCATGTAATCAAAAAGTCAAATCAAAC ]
[+] EMBL CD199146 [ ACCAAGAAGTGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGGGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATGATAATAACAGTGGTGTTGATTCATCANAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGTATT AAAAAAGAAAC ]
[+] EMBL CD199120 [ ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAGGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATCCATCANAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGCNACATGAT CCG CAGTATT AAAAAga ]
[+] EMBL CD198890 [ ACCAAGAAGTGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGCTGATTCATCAAAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGTATT AAAAAAGAAACCTGCTGCATATTTAAGAGCATCATATAGTCAA GGAAATGTTGC TTTTGTTCAGCTTG AAAGT AA TTCAAATATNGAACCCGAATAATT ]
[+] EMBL CD199039 [ ACCAAGAAGTGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCAAAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGTATT AAAAAAGAAACCTGCTGCATATTTAAGAGCATCATATAGTCAA GGAAATGTTGC TTTTGTTCAGCTTG AAAGT AA TTC AATAT GAAACCGAAat ]
[+] EMBL CD198967 [ ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCAAAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCNCG CAGTATT AAAAAAG AACCTGCTGCATATTTAAGAGCATCATATAGTCAA GGAAATGTTGCTTTTTGTTCAGCTTG AAAGT AA TTCAAATATNGAAc ]
[+] EMBL CD198973 [ ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAGCACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTTAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCAAAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGTATT AAAAAAGAAACCTGCTGCATATTTAAGAGCATCATATAGTCAA GGAAATGTTGC TTTTGTTCAGCTTGNNAAGT AT TTC AATAT GAAAC ]
[+] EMBL CD198848 [ ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCAAAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGTATT AAAAAAG AACCTGCTGCATATTTAAGAGCATCATATAGTCAA GGAAATGTTGC TTTTGTTCAGCTTG AAAGT AATTTCAAATAT GAAcc ]
[+] EMBL CD198878 [ ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCAAAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGTATT AAAAAAGAAACCTGCTGCATATTTAAGAGCATCATATAGTCAA AGGAATGTTGC TTTTGTTCAGCTTG AAAGT A TTCAAATATNGAAc ]
[+] EMBL CD198910 [ ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGCCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCAAAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGTATT ]
[+] EMBL CD199135 [ ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCAAAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGTATT AAAAAAGAAACCTGCTGCATATTTAAGAGCATCATATAGTCAA GGAAATGTTGC TTTTGTTCAGCTTG AAAGT AA TTTCAATA ]
[+] EMBL CD198934 [ ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAGAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCAAAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGga ]
[+] EMBL CD198929 [ ACCAAGAAGTGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATATGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCAAAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGTATT AAAAAAG AACCTGCTGCATATTTAAGAGCATCATATAGTCAA GGAAATGTTGC TTTTGTTCAGCTTtt ]
[+] EMBL CD199062 [ ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCAAAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGTATT AAAAAAG AACCTGCTGCATATTTAAGAGCATCATATAGTCAA GGAAATGTTGC TTTTGTTCAGCTTt ]
[+] EMBL CD198875 [ ACCAAGAAGTGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAGTCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCAAAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGTATT AAAAAAGAAACCTGCTGCATATTTAAGAGCATCATATAGTCAA GGAAATGTTGC TTCTGTTCAGCT ]
[+] EMBL CD198957 [ ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCAAAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGTATT AAAAAAGAAACCTGCTGCATATTTAAGAGCATCATATAGTCAA GGAAATGTTGC TTTTTGTCAG ]
[+] EMBL CD199043 [ ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCAAAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGTATT AGAAAGAGACCTGCTGCATATTGTAGAGCATCATATAGTCAA GGAAATGTTGC TT ]
[+] EMBL CD199159 [ ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCAAAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGTATT AAAAAAGAAACCTGCTGCATATNTAAGAGCATCATATAGTCNA G ]
[+] EMBL CD199136 [ ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCAAAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGTATT AAAAAAG AACCTGCTGCATATTTAAGAGCATCATATAGT ]
[+] EMBL CD199108 [ ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCANAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGTATT AAAAAAG AACCTGCTGCATATTTAAGAGCATCATATAGT ]
[+] EMBL CD199115 [ ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGACTCATCAAAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCNCG CAGTATT AAAAAAG AACCTGCTGCATATNTNAGAGCATCATATAG ]
[+] EMBL CD199117 [ ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCANAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGTATT AAAAAAG AACCTGCTGCATATNTNAGAGCATCATATAG ]
[+] EMBL CD199149 [ ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCANAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGTATT AAAAAAGAAA CTGCTGCATATNTAAGAGCATCATAT ]
[+] EMBL CD199138 [ ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCAAAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGTATT AAAAAAGAAACCTGCTGCATATTTNAGAGCATCAT ]
[+] EMBL CD199131 [ ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTGTTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCANAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGNTCAGC ACATGATCCCG CAGTATT AAAAAAG AACCTGCTGCATATNTAAGAGCAT ]
[-] EMBL CD199082 [ TCATCTAGAACAGCCTGGTCAGC ACATGATCCCG CAGTATT AAAAAAGAAACCTGCTGCATATTTAAGAGCATCATATAGTCAA GGAAATGTTGC TTTGTTTCAGCTGN AAAGT AA TTCAAATAT GAAACCGAATAATTCAAACANCCAACTAGACAAATCTCAGCAGTCACCTCTTCCGTGTTCAAACAGCAAGTCATGTAATCAAAAAGTCAAATCAAACGACACTACTGGATCATCTCCAGACAATCGTTCAGAAAGGAATAATACACACGCCAAGTCAAATCGTTGTCATCACCCACCAAGGCGTAATCGACGTTATATATCGAAGAGCCTTAGTGTTTGCATGGATGGTACAACAACAAAC ]
[-] EMBL CD198887 [ CAGC ACATGATCCCGNCAGTATTAAAAAAAGAAACCTGCTGCATATTTAAGAGCATCATATAGTCAA GGAAATGTTGC TTTTGTTCAGCTTG AAAGT AA TTCAAATAT GAAACCGAATAATTCAAACAACCAACTAGACAAATCTCAGCAGTCACCTCTTCCGTGTTCAAACAGCAAGTCATGTAATCAAAAAGTCAAATCAAACGACACTACTGGATCATCTCCAGACAATCGTTCAGAATGGAATAATACACACGCCAAGTCAAATCGTTGTCATCACCCACCAAGGCGTAATCGACGTTATATATCGAAGAGCCTTAGTGTTTGCATGGATGGTACAACAACAAAC ]
[-] EMBL CD199070 [ ATAGTCAAGGGAAATGTTGC TTTGTTTCAGC TG AAAGTAAA TTCAAATAT GAANCCGAATAATTCAAACAACCAACTAGACAAATCTCAGCAGTCACCTCTTCCGTGTTCAAACAGCAAGTCATGTAATCAAAAAGTCAAATCAAACGACACTACTGGATCATCTCCAGACAATCGTTCAGAATGGAATAATACACACGCCAAGTCAAATCGTTGTCATCACCCACCAAGGCGTAATCGACGTTATATATCGAAGAGCCTTAGTGTTTGCATGGATGGTACAACAACAAAC ]
[-] EMBL CD199087 [ ACAACCANCTAGACAAATCTCAGCAGTCACCTCTTCCGTGTTCAAACAGCAAGTCATGTAATCAAAAAGTCAAATCAAACGACTCTACTGGATCATCTCCAGACAATCGTTCAGAATGGAATAATACACACGCCAAGTCAAATCGTTGTCATCACCCACCAAGGCGTAATCGACGTTATATATCGAAGAGCCTTAGTGTTTGCATGGATGGTACAACAACAAAC ]
[+] EMBL CD196011 [ AAGTCAAATCAAACGACACTACTGGATCATCTCCAGACAATCGTTCAGAATGGAACAATACACACGCCAAGTCAAATCGTCGTCATCACCCACCAAGGCGTAATCGACGTTATATATCGAAGAGCCTTAGAGTTTGCATGGATGGTACAACAACAAACAATCCAGTCACTGGTATACTAAAAGAGGGAATTTCAATAAATCTTCATACTAATAAAATTAACGAACCTAAAAATGAGTTTATTACATCAAACTGGCTACTGTTGCCCGATGAATTATGGCTTGAAGTACT ]
[+] EMBL AI975029 [ AACGACACTACTGGATCATCTCCAGACAATCGTTCAGAATGGAATAATACACACGCCAAGTCAAATCGTTGTCATCACCCACCAAGGCGTAATCGATGTTATATATCGAAGAGCCTTAGTATTTGCATGGATGGTACAACAACAAACAATCCAGTCACTGGTATACTAAAAGAGGGAATTTCAATAAATCTTCATACTAATAAAATTAACGAACCTAAAAATGAGTTTATTACATCAAACTGGCTACTGTTGCCCGATGAATTATGGCTTGAAGTACTCCGATATTTAAGTCCAGTTGATCGTGTACGGGTTGCTCAAACTTGTCGACATTTGTCTAGACTTTCAATGGATCGTTCATTATGGCGAGTCATTCATCTTCATCGACAACACCATTTGACTGATGCAGATTTAGTGAGAATTGGAAATCTTAAACCAAAAGAATTACGTT ]
[-] EMBL CD188715 [ TTATATATCGAAGAGCCTTAGTGTTTGCATGGATGGTACAACAACAAACAATCCAGTCACTGGTATACTAAAAGAGGGAATTTCAATAAATCTTCATACTAATAAAATTAACGAACCTAAAAATGAGTTTATTACATCAAACTGGCTACTGTTGCCCGATGAATTATGGCTTGAAGTACTCCGATATTTAAGTCCAGTTGATCGTGTACGGGTTGCTCAAACTTGTCGACATTTGTCTAGACTTTCAATGGATCGTTCATTATGGCGAGTCATTCATCTTCATCGACAACACCATTTGACTGATGCAGATTTAGTGAGAATTGGAAATCTTAAACCAAAAGAATTACGTTTCACTTATTGTCGTGGTGATAGCCTAACTGCTACAGGGTTAAAACGCATGTTTCTA]
consensusID : consensus_11140#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 530 fasta sequence
[ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAANAGTGTTCGCGTACGTGGTGGATATCGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACACTGGTGTTGATTCATCAAAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGCACATGATCCCGCAGTATTAAAAAAGAAGAAACCGAATAATTCAAACAACCAACTAGACAAATCTCAGCAGTCACCTCTTCCGTGTTCAAACAGCAAGTCATGTAATCAAAAAGTCAAATCAAACGACACTACTGGATCATCTCCAGACAATCGTTCAGAATGGAATAATACACACGCCGAGTCAAATCGTTGTCATCACCCACCAAGGCGTAATCGACGTTATATATCGAAGAGCCTTAGTGTTTGCATGGATGGTACAACAACAAAC]
[-] EMBL CD096299 [ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAANAGTGTTCGCGTACGTGGTGGATATCGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGCTCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAGATTTTGAAGATAATAATAACACTGGTGTTGATTCATCAAAATTGCAACCCAATTTTAATTGGCAGTCATCTAGAACAGCCTGGTCAGCACATGATCCCGCAGTATTAAAAAAGAAGAAACCGAATAATTCAAACAACCAACTAGACAAATCTCAGCAGTCACCTCTTCCGTGTTCAAACAGCAAGTCATGTAATCAAAAAGTCAAATCAAACGACACTACTGGATCATCTCCAGACAATCGTTCAGAATGGAATAATACACACGCCGAGTCAAATCGTTGTCATCACCCACCAAGGCGTAATCGACGTTATATATCGAAGAGCCTTAGTGTTTGCATGGATGGTACAACAACAAAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11140#0 GATCCCTGCAACTTTAAATTGTTGTATCCCAAAGAAAATGGTTTTACTCAATCGATATTA 60
consensus_11140#1 ------------------------------------------------------------
consensus_11140#0 TGGAATTCTAAACATTTTAATGATAATAAAAGTTGCAGTCAGTTTTCTCATCCATTTAAC 120
consensus_11140#1 ------------------------------------------------------------
consensus_11140#0 AATGTTTCTGATGATCGTCATCGTCGTACATCTGGTCCAGGCATGCAGAATAAATAACAA 180
consensus_11140#1 ------------------------------------------------------------
consensus_11140#0 GTGAACATAGTAGCTTGGAAAATGTATATCATGCTAACAGTGTCCCTTCCAGTTATCTAA 240
consensus_11140#1 ------------------------------------------------------------
consensus_11140#0 CTATCAATACTTCACCAATCAATTCATTGATAGACACTTCCCAAGGCCAGTATACATTTT 300
consensus_11140#1 ------------------------------------------------------------
consensus_11140#0 CAGATAACTGGTGGGATAATCCTTCAGCATCACAAATTGTAGCTGACCTTTTGAGGGAAA 360
consensus_11140#1 ------------------------------------------------------------
consensus_11140#0 CACAACTTTCAGTTTCAGCTAACACTAGTATTCCTCCTAAGTCAGCATTATACCAGCCAT 420
consensus_11140#1 ------------------------------------------------------------
consensus_11140#0 GGCAATACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAAAAGTG 480
consensus_11140#1 ------ACCAAGAAATGATTCCCTCAGCCAGTAAAAGTCCTTCGGCATCACGCAANAGTG 54
************************************************* ****
consensus_11140#0 TTCGCATACGTGGTGGATATTGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGC 540
consensus_11140#1 TTCGCGTACGTGGTGGATATCGTCGTCGTAAACACCCATCTGAATGTTCCAGAACTCAGC 114
***** ************** ***************************************
consensus_11140#0 TCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAG 600
consensus_11140#1 TCAATAATCTTACTACTTTTCAAAATCCAGCCATCTGTCGTGCCCGTAGTTTTAGTTCAG 174
************************************************************
consensus_11140#0 ATTTTGAAGATAATAATAACAGTGGTGTTGATTCATCAAAATTGCAACCCAATTTTAATT 660
consensus_11140#1 ATTTTGAAGATAATAATAACACTGGTGTTGATTCATCAAAATTGCAACCCAATTTTAATT 234
********************* **************************************
consensus_11140#0 GGCAGTCATCTAGAACAGCCTGGTCAGCACATGATCCCGCAGTATTAAAAAAGAAACCTG 720
consensus_11140#1 GGCAGTCATCTAGAACAGCCTGGTCAGCACATGATCCCGCAGTATTAAAAAAGAA----- 289
*******************************************************
consensus_11140#0 CTGCATATTTAAGAGCATCATATAGTCAAGGAAATGTTGCTTTTGTTCAGCTTGAAAGTA 780
consensus_11140#1 ------------------------------------------------------------
consensus_11140#0 ATTCAAATATGAAACCGAATAATTCAAACAACCAACTAGACAAATCTCAGCAGTCACCTC 840
consensus_11140#1 ----------GAAACCGAATAATTCAAACAACCAACTAGACAAATCTCAGCAGTCACCTC 339
**************************************************
consensus_11140#0 TTCCGTGTTCAAACAGCAAGTCATGTAATCAAAAAGTCAAATCAAACGACACTACTGGAT 900
consensus_11140#1 TTCCGTGTTCAAACAGCAAGTCATGTAATCAAAAAGTCAAATCAAACGACACTACTGGAT 399
************************************************************
consensus_11140#0 CATCTCCAGACAATCGTTCAGAATGGAATAATACACACGCCAAGTCAAATCGTTGTCATC 960
consensus_11140#1 CATCTCCAGACAATCGTTCAGAATGGAATAATACACACGCCGAGTCAAATCGTTGTCATC 459
***************************************** ******************
consensus_11140#0 ACCCACCAAGGCGTAATCGACGTTATATATCGAAGAGCCTTAGTGTTTGCATGGATGGTA 1020
consensus_11140#1 ACCCACCAAGGCGTAATCGACGTTATATATCGAAGAGCCTTAGTGTTTGCATGGATGGTA 519
************************************************************
consensus_11140#0 CAACAACAAACAATCCAGTCACTGGTATACTAAAAGAGGGAATTTCAATAAATCTTCATA 1080
consensus_11140#1 CAACAACAAAC------------------------------------------------- 530
***********
consensus_11140#0 CTAATAAAATTAACGAACCTAAAAATGAGTTTATTACATCAAACTGGCTACTGTTGCCCG 1140
consensus_11140#1 ------------------------------------------------------------
consensus_11140#0 ATGAATTATGGCTTGAAGTACTCCGATATTTAAGTCCAGTTGATCGTGTACGGGTTGCTC 1200
consensus_11140#1 ------------------------------------------------------------
consensus_11140#0 AAACTTGTCGACATTTGTCTAGACTTTCAATGGATCGTTCATTATGGCGAGTCATTCATC 1260
consensus_11140#1 ------------------------------------------------------------
consensus_11140#0 TTCATCGACAACACCATTTGACTGATGCAGATTTAGTGAGAATTGGAAATCTTAAACCAA 1320
consensus_11140#1 ------------------------------------------------------------
consensus_11140#0 AAGAATTACGTTTCACTTATTGTCGTGGTGATAGCCTAACTGCTACAGGGTTAAAACGCA 1380
consensus_11140#1 ------------------------------------------------------------
consensus_11140#0 TGTTTCTA 1388
consensus_11140#1 --------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||