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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11142#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 35 consensus length = 981 fasta sequence
[GCTGGTGTATATCGTGGCATGGCTCCTTACAGAATTGTGTTTATTCGCCATGG-AGAGAGTGTTTACAATG-AAGAAAATCGATTTTGTGGTTGGCATGATGCAGATCTTTCAGGACAAGGTATCACTGAGGCTAAACAAGCTGGCCAACTTCTA-CGCCAAAATCACTTCA-CCTTTGATATTGCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTG-ATGAACTTGATCTTAACTGG-ATACCTGTGACAAAAACATGGCG-TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT-GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT-CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA-CGTA-CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA-GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA-CTC-AATATA-CCCACTGGTATT-CCACTAGTCTATGAA-CTGGATGCGAA-CTTGAAG-CCAA-CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG-CAATAG-CACGTGTGGCG-AACCAGGG-AAAAAAGAAATGAAGCGAATAATTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAATTTTAGTCATCTATAGCTTTGAGTAATGAACAGATACTCTGATCGTCCTTACTCATAATCGTATTGTATGAAGTAAATATTTTCCTTTATAGCGTTTGTTTTATAGGTTATAGTTATGATAAGATCAAAAAATTA]
[+] EMBL AA559423 [GCTGGTGTATATCGTGGCATGGCTCCTTACAGAATTGTGTTTATTCGCCATGGAAGAGAGTGTTTACAATGNAAAAAAATCGATTTTGTGGTTGGCATGATGCAAATCTTTCAGGACAAGGTATCACTGAGGCTAAACAAGCTGGCCAACTTCTA CGCCAAAATCACTTCA CCTTTGATATTGCCTATACAAGCGTTCTAAAAAGAGCCATCAANACTTTAAACTTTGTCCTTGAATGAACTTGATCTTAACTGGAATACCTGTGACAAAAACATGGCG TCTAAATNAAAanaat ]
[-] EMBL CD202608 [ agGTATATCGTGGCATAGCTCCTTACAGAATTGTGTTTATTCGCCATGG AGAGAGTGTTTACAATG AAGAAAATCGATTTTGTGGTTGGCATGATGCAGATCTTTCAGGACAAGGTATCACTGAGGCTAAACAAGCTGGCCAACTTCTA CGCCAAAATCACTTCA CCTTTGATATTGCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAG ]
[+] EMBL AI975524 [ ATATCGTGGCATGGCTCCTTACAGAATTGTGTTTATTCGCCATGG AGAGAGTGTTTACAATG AAGAAAATCGATTTTGTGGTTGGCATGATGCAGATCTTTCAGGACAAGGTATCACTGAGGCTAAACAAGCTGGCCAACTTCTA CGCCAAAATCACTTCA CCTTTGATATTGCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCT ]
[+] EMBL AI976100 [ ATATCGTGGCATGGCTCCTTACAGAATTGAGTTTATTCGCCATGG AGAGAGTGTTTACAATG AAGAAAATCGATTTTGTGGTTGGCATGATGCAGATCTTTCAGGACAAGGTATCACTGAGGCTAAACAAGCTGGCCAACTTCTA CGCCAAAATCACTTCA CCTTTGATATTGCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTCTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACACGTTATAATATGGACACGTGC ]
[+] EMBL CD202585 [ TGGCTCCTTACAGAATTGTGTTTATTCGCCATGG AGAGAGTGTTTACAATG AAGAAAATCGATTTTGTGGTTGGCATGATGCAGATCTTTCAGGACAAGGTATCACTGAGGCTAAACAGGGTGGCCAACTTCTA CGCCAAAATCACTTCA CCTTTGATATTGCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGT ]
[+] EMBL BF936733 [ CGCCATGG AGAGAGTGTTTACAATG AAGAAAATCGATTTTGTGGTTGGCATGATGCAGATCTTTCAGGACAAGGTATCACTGAGGCTAAACAAGCTGGCCAACTTCTA CGCCAAAATCACTTCA CCTTTGATATTGCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATACCCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CC A CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CATTAGCCACGTGTGGg ]
[+] EMBL CD169570 [ TTACAATG AAAAAAATCGATTTTGTGGTTGGCATGATGCAGATCTTTCAGGACAAGGTATCACTGAGGCTAAACAAGCTGGCCAACTTCTA CGCCAAAATCACTTCA CCTTTGATATTGCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTC ]
[+] EMBL CD202616 [ ATCACTGAGGCTAAACAAGCTGGCCAACTTCTA CGCCAAAATCACTTCA CCTTTGATATTGCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTG ATGAACTGGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGCGTGCCCTACT ]
[-] EMBL CD072388 [ GGCTAAACCAGCTGGCCAACTTCTACCGCCAAAATCACTTCACCCTTTGATATNGCCTATACAAGCG TCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAG ]
[-] EMBL CD072372 [ GGCTAAACAAGCTGGCCANCTTCTA CGTCAGAATCACTTCA CCTTTGATATTGCCTATACAAGCGTTCTAAAGAGAGCCATCAAGACTTTAAACTTTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAG ]
[-] EMBL CD072355 [ TCTA CGCCAAAATCACTTCA CCTTTGATATTGCCTATACAAGCG TCTAAANAGAGCCATCAAGACTTTAAACTTTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAG ]
[-] EMBL CD089309 [ GCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCT ]
[-] EMBL BG932418 [ AAGAGCCATCAAGACTTTAAACTTTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTg ]
[+] EMBL AI977618 [ GACTTTAAACTTTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGTGTGGCG AACCAGGG AAAAAAGAAATGAAGCGAATAATTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAAATTTAGTCATCTATAGCTTTGAGT ]
[+] EMBL AA559596 [ CTTTAAACTTTGTCCTTG ANGAACTTGATCTTAACTGG ATACCNGTGACAAAAACATGGCGNTCTNAATGANNNAATGTACGGTGCTCTTCAAGGTCTGAATAATTCTGAAACTGCTGCCAAACATGGGAGAGGAACAAGTTAAGATATGGAGACGTGCTTATGATNTACCNCCCCCTCCTGTTGACATTTCNNAT CCTCGCTT ]
[+] EMBL CD132750 [ AAACTTTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CAC ]
[+] EMBL AI977177 [ TAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGTGTGGCG AACCAGGG AAAAAAGATATGAAGCGAATAATTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAAATTTAGT ]
[+] EMBL CD142972 [ TGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTCGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG C ]
[+] EMBL CD138996 [ AGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGC ]
[+] EMBL CD125559 [ AGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGCTTGATACTATTTCTGCAA GTTTAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGA ]
[+] EMBL CD084189 [ CGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGTGTGGCG AACCAGGG AAAAAAGAAATGAAGCGAATAATTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAATTTTAGTCATCTATAGCTTTGAGTAATGAACAGATACTCTGATCGTCCTTACTCATAA ]
[-] EMBL CD072384 [ GACA TTCAGATNGCTCGC TCCCCGGTAATGANCCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTNTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAA ]
[-] EMBL BG930817 [ GCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTCTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGTGTGGCG Ac ]
[+] EMBL CD142924 [ CCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGAC ]
[+] EMBL SM1247298 [ CAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACG ]
[-] EMBL SM1247312 [ AAAGTATGCCRTACTTGACTCTTCCTGNATACCANCGTAKCTGAGTGSTTAAAGGACACTGTCTAACGMGTACTGCCA TTTGGTTTGATACTATTTCTGCAAGGTATAAYGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAGNCCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGT ]
[-] EMBL CD196722 [ TACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGTGTGGCG AACCAGGG AAAAAAGAAATGAAGCGAATAATTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAATTTTAGTCATCTATAGCTTTGAGTAATGAACAGATACTCTGATCGTCCTTACTCATAATCGTATTGTATGAAGTA ]
[+] EMBL CD079109 [ GCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGTGTGGCG AACCAGGG AAAAAAGAAATGAAGCGAATAATTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAATTTTAGTCATCTATAGCTTTGAGTAATGAACAGATACTCTGATCGTCCTTACTCATAATCGTATTGTATGAAGTAAATATTTTCCTTTATAGCGTTTGTTTTATAGGTTATAGTTATGATAAGATCAAAAAATT ]
[-] EMBL CD073563 [ CAA GTATAAAGAGACGCGAACAGGTTTTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGTGTGGCG AACCAGGG AAAAAAGAAATGAAGCGAATAATTATCATTATCGATAATTTTTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAATTTTAGTCATCTATAGCTTTGAGTAATGAACAGATACTCTGATCGTCCTTACTCATAATCGTATTGTATGAAGTAAATATTTTCCTTTATAGCGTTTGTTTTATAGGTTATAGTTATGATAAGATCAAAAAATTA]
[-] EMBL CD137081 [ GTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGTGTGGCG AACCAGGG AAAAAAGAAATGAAGCGAATAATTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAATTTTAGTCATCTATAGCTTTGAGTAATGAACAGATACTCTGATCGTCCTTACTCATA ]
[-] EMBL SMW743 [ CAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGTGTGGCG AACCAGGG AAAAAAGAAATGAAGCGAATAATTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAATTTTAGTCATCTATAGCTTTGAGTAATGAACAGATACTCTGATCGTCCTTACTCATAATCGTATTGTATGAAGTAAATA ]
[+] EMBL CD136820 [ TTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGGA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGTGTGGCG AGCCAGGG AAAAAAGAAATGGAGCGAATAATTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAATTTTAGTCATCTATAGCTTTGAGTAATGAACAGATACTCTGATCGTCCTTACTCAT ]
[-] EMBL AA999292 [ ACATCTGAGTCAGATATTGTGGAACCTCAAATATC CCCACTGGTATTCCCACTAGTCTATGAACCTGGATGCGAACCTTGAAG CCAACCCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGTGTGGCG AACCAGGG AAAAAAGAAATGAAGCGAATAATTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAATTTTAGTCATCTATAGCTTTGAGTAATGAACAGATACTCTGATCGTCCTTACTCATAATCGTATTGTATGAAGTAAATA ]
[-] EMBL AA999387 [ TT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAGAAAATAG CACGTGTGGCG AACCAGGG AAAAAAGAAATGAAGCGAATAATTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAATNTTAGTCATCTATAGCTTTGAGTAATGAACAGATACTCTGATCGTCCTTACTCATAATCGTATTGTATGAAGTAAATATTTT ]
[+] EMBL SM632 [ AG CCCGTGTGGCGAAACCNGGGAAAAAAAGAAATGAAGCGAATAATTATCTTTATCGATAATTTCTTCTTTATTCTTCCATCCATTAATATTTAACTCTTGTTTGGAATAATTTTAGTCATCTATAGCTTNGAGTAATGAACNGATACTCTGATCGTCCTTACTCATAATCGTATTGTATGANGTA ]
consensusID : consensus_11142#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 290 fasta sequence
[CTGAGGCTAAACAAGCTGGCCAACTTCTACGCCAAAATCACTTCACCTTTGATATTGCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTGATGAACTTGATCTTAACTGGATACCTGTGACAAAAACATGGCGTCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACATGGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCGCTCCTGTTCCACCTGGGGTACCGGTC]
[-] EMBL CD168298 [CTGAGGCTAAACAAGCTGGCCAACTTCTACGCCAAAATCACTTCACCTTTGATATTGCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTGATGAACTTGATCTTAACTGGATACCTGTGACAAAAACATGGCGTCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACATGGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCGCTCCTGTTCCACCTGGGGTACCGGTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11142#0 GCTGGTGTATATCGTGGCATGGCTCCTTACAGAATTGTGTTTATTCGCCATGGAGAGAGT 60
consensus_11142#1 ------------------------------------------------------------
consensus_11142#0 GTTTACAATGAAGAAAATCGATTTTGTGGTTGGCATGATGCAGATCTTTCAGGACAAGGT 120
consensus_11142#1 ------------------------------------------------------------
consensus_11142#0 ATCACTGAGGCTAAACAAGCTGGCCAACTTCTACGCCAAAATCACTTCACCTTTGATATT 180
consensus_11142#1 ----CTGAGGCTAAACAAGCTGGCCAACTTCTACGCCAAAATCACTTCACCTTTGATATT 56
********************************************************
consensus_11142#0 GCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTGATGAACTT 240
consensus_11142#1 GCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTGATGAACTT 116
************************************************************
consensus_11142#0 GATCTTAACTGGATACCTGTGACAAAAACATGGCGTCTAAATGAAAGAATGTACGGTGCT 300
consensus_11142#1 GATCTTAACTGGATACCTGTGACAAAAACATGGCGTCTAAATGAAAGAATGTACGGTGCT 176
************************************************************
consensus_11142#0 CTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACATGGAGAGGAACAAGTTAAAATA 360
consensus_11142#1 CTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACATGGAGAGGAACAAGTTAAAATA 236
************************************************************
consensus_11142#0 TGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGATCCTCGCTTCCCC 420
consensus_11142#1 TGGAGACGTGCTTATGATATACCTCCCGCTCCTGTTC-CACCTGGGGTACCGGTC----- 290
*************************** ******** ** * * * * *
consensus_11142#0 GGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCACGTACTGAGTGTTTA 480
consensus_11142#1 ------------------------------------------------------------
consensus_11142#0 AAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAAGTATAAAG 540
consensus_11142#1 ------------------------------------------------------------
consensus_11142#0 AGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTAC 600
consensus_11142#1 ------------------------------------------------------------
consensus_11142#0 TTGGATAATACATCTGATTCAGATATTGTGGAACTCAATATACCCACTGGTATTCCACTA 660
consensus_11142#1 ------------------------------------------------------------
consensus_11142#0 GTCTATGAACTGGATGCGAACTTGAAGCCAACCAAACACTATTATCTTGCCGATGAAGCG 720
consensus_11142#1 ------------------------------------------------------------
consensus_11142#0 ACAGTAGCAGCAGCAATAGCACGTGTGGCGAACCAGGGAAAAAAGAAATGAAGCGAATAA 780
consensus_11142#1 ------------------------------------------------------------
consensus_11142#0 TTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTT 840
consensus_11142#1 ------------------------------------------------------------
consensus_11142#0 GAATAATTTTAGTCATCTATAGCTTTGAGTAATGAACAGATACTCTGATCGTCCTTACTC 900
consensus_11142#1 ------------------------------------------------------------
consensus_11142#0 ATAATCGTATTGTATGAAGTAAATATTTTCCTTTATAGCGTTTGTTTTATAGGTTATAGT 960
consensus_11142#1 ------------------------------------------------------------
consensus_11142#0 TATGATAAGATCAAAAAATTA 981
consensus_11142#1 ---------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||