These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11142#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 35 consensus length = 981 fasta sequence [GCTGGTGTATATCGTGGCATGGCTCCTTACAGAATTGTGTTTATTCGCCATGG-AGAGAGTGTTTACAATG-AAGAAAATCGATTTTGTGGTTGGCATGATGCAGATCTTTCAGGACAAGGTATCACTGAGGCTAAACAAGCTGGCCAACTTCTA-CGCCAAAATCACTTCA-CCTTTGATATTGCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTG-ATGAACTTGATCTTAACTGG-ATACCTGTGACAAAAACATGGCG-TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT-GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT-CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA-CGTA-CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA-GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA-CTC-AATATA-CCCACTGGTATT-CCACTAGTCTATGAA-CTGGATGCGAA-CTTGAAG-CCAA-CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG-CAATAG-CACGTGTGGCG-AACCAGGG-AAAAAAGAAATGAAGCGAATAATTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAATTTTAGTCATCTATAGCTTTGAGTAATGAACAGATACTCTGATCGTCCTTACTCATAATCGTATTGTATGAAGTAAATATTTTCCTTTATAGCGTTTGTTTTATAGGTTATAGTTATGATAAGATCAAAAAATTA] [+] EMBL AA559423 [GCTGGTGTATATCGTGGCATGGCTCCTTACAGAATTGTGTTTATTCGCCATGGAAGAGAGTGTTTACAATGNAAAAAAATCGATTTTGTGGTTGGCATGATGCAAATCTTTCAGGACAAGGTATCACTGAGGCTAAACAAGCTGGCCAACTTCTA CGCCAAAATCACTTCA CCTTTGATATTGCCTATACAAGCGTTCTAAAAAGAGCCATCAANACTTTAAACTTTGTCCTTGAATGAACTTGATCTTAACTGGAATACCTGTGACAAAAACATGGCG TCTAAATNAAAanaat ] [-] EMBL CD202608 [ agGTATATCGTGGCATAGCTCCTTACAGAATTGTGTTTATTCGCCATGG AGAGAGTGTTTACAATG AAGAAAATCGATTTTGTGGTTGGCATGATGCAGATCTTTCAGGACAAGGTATCACTGAGGCTAAACAAGCTGGCCAACTTCTA CGCCAAAATCACTTCA CCTTTGATATTGCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAG ] [+] EMBL AI975524 [ ATATCGTGGCATGGCTCCTTACAGAATTGTGTTTATTCGCCATGG AGAGAGTGTTTACAATG AAGAAAATCGATTTTGTGGTTGGCATGATGCAGATCTTTCAGGACAAGGTATCACTGAGGCTAAACAAGCTGGCCAACTTCTA CGCCAAAATCACTTCA CCTTTGATATTGCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCT ] [+] EMBL AI976100 [ ATATCGTGGCATGGCTCCTTACAGAATTGAGTTTATTCGCCATGG AGAGAGTGTTTACAATG AAGAAAATCGATTTTGTGGTTGGCATGATGCAGATCTTTCAGGACAAGGTATCACTGAGGCTAAACAAGCTGGCCAACTTCTA CGCCAAAATCACTTCA CCTTTGATATTGCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTCTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACACGTTATAATATGGACACGTGC ] [+] EMBL CD202585 [ TGGCTCCTTACAGAATTGTGTTTATTCGCCATGG AGAGAGTGTTTACAATG AAGAAAATCGATTTTGTGGTTGGCATGATGCAGATCTTTCAGGACAAGGTATCACTGAGGCTAAACAGGGTGGCCAACTTCTA CGCCAAAATCACTTCA CCTTTGATATTGCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGT ] [+] EMBL BF936733 [ CGCCATGG AGAGAGTGTTTACAATG AAGAAAATCGATTTTGTGGTTGGCATGATGCAGATCTTTCAGGACAAGGTATCACTGAGGCTAAACAAGCTGGCCAACTTCTA CGCCAAAATCACTTCA CCTTTGATATTGCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATACCCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CC A CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CATTAGCCACGTGTGGg ] [+] EMBL CD169570 [ TTACAATG AAAAAAATCGATTTTGTGGTTGGCATGATGCAGATCTTTCAGGACAAGGTATCACTGAGGCTAAACAAGCTGGCCAACTTCTA CGCCAAAATCACTTCA CCTTTGATATTGCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTC ] [+] EMBL CD202616 [ ATCACTGAGGCTAAACAAGCTGGCCAACTTCTA CGCCAAAATCACTTCA CCTTTGATATTGCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTG ATGAACTGGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGCGTGCCCTACT ] [-] EMBL CD072388 [ GGCTAAACCAGCTGGCCAACTTCTACCGCCAAAATCACTTCACCCTTTGATATNGCCTATACAAGCG TCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAG ] [-] EMBL CD072372 [ GGCTAAACAAGCTGGCCANCTTCTA CGTCAGAATCACTTCA CCTTTGATATTGCCTATACAAGCGTTCTAAAGAGAGCCATCAAGACTTTAAACTTTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAG ] [-] EMBL CD072355 [ TCTA CGCCAAAATCACTTCA CCTTTGATATTGCCTATACAAGCG TCTAAANAGAGCCATCAAGACTTTAAACTTTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAG ] [-] EMBL CD089309 [ GCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCT ] [-] EMBL BG932418 [ AAGAGCCATCAAGACTTTAAACTTTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTg ] [+] EMBL AI977618 [ GACTTTAAACTTTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGTGTGGCG AACCAGGG AAAAAAGAAATGAAGCGAATAATTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAAATTTAGTCATCTATAGCTTTGAGT ] [+] EMBL AA559596 [ CTTTAAACTTTGTCCTTG ANGAACTTGATCTTAACTGG ATACCNGTGACAAAAACATGGCGNTCTNAATGANNNAATGTACGGTGCTCTTCAAGGTCTGAATAATTCTGAAACTGCTGCCAAACATGGGAGAGGAACAAGTTAAGATATGGAGACGTGCTTATGATNTACCNCCCCCTCCTGTTGACATTTCNNAT CCTCGCTT ] [+] EMBL CD132750 [ AAACTTTGTCCTTG ATGAACTTGATCTTAACTGG ATACCTGTGACAAAAACATGGCG TCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CAC ] [+] EMBL AI977177 [ TAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGTGTGGCG AACCAGGG AAAAAAGATATGAAGCGAATAATTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAAATTTAGT ] [+] EMBL CD142972 [ TGAAACTGCTGCCAAACAT GGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTCGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG C ] [+] EMBL CD138996 [ AGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGC ] [+] EMBL CD125559 [ AGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGCTTGATACTATTTCTGCAA GTTTAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGA ] [+] EMBL CD084189 [ CGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGAT CCTCGCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGTGTGGCG AACCAGGG AAAAAAGAAATGAAGCGAATAATTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAATTTTAGTCATCTATAGCTTTGAGTAATGAACAGATACTCTGATCGTCCTTACTCATAA ] [-] EMBL CD072384 [ GACA TTCAGATNGCTCGC TCCCCGGTAATGANCCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTNTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAA ] [-] EMBL BG930817 [ GCTTCCCCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTCTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGTGTGGCG Ac ] [+] EMBL CD142924 [ CCGGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGAC ] [+] EMBL SM1247298 [ CAAAGTATGCCTTACTTGACTCTTCCTGCATACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACG ] [-] EMBL SM1247312 [ AAAGTATGCCRTACTTGACTCTTCCTGNATACCANCGTAKCTGAGTGSTTAAAGGACACTGTCTAACGMGTACTGCCA TTTGGTTTGATACTATTTCTGCAAGGTATAAYGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAGNCCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGT ] [-] EMBL CD196722 [ TACCA CGTA CTGAGTGTTTAAAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGTGTGGCG AACCAGGG AAAAAAGAAATGAAGCGAATAATTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAATTTTAGTCATCTATAGCTTTGAGTAATGAACAGATACTCTGATCGTCCTTACTCATAATCGTATTGTATGAAGTA ] [+] EMBL CD079109 [ GCAA GTATAAAGAGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGTGTGGCG AACCAGGG AAAAAAGAAATGAAGCGAATAATTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAATTTTAGTCATCTATAGCTTTGAGTAATGAACAGATACTCTGATCGTCCTTACTCATAATCGTATTGTATGAAGTAAATATTTTCCTTTATAGCGTTTGTTTTATAGGTTATAGTTATGATAAGATCAAAAAATT ] [-] EMBL CD073563 [ CAA GTATAAAGAGACGCGAACAGGTTTTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGTGTGGCG AACCAGGG AAAAAAGAAATGAAGCGAATAATTATCATTATCGATAATTTTTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAATTTTAGTCATCTATAGCTTTGAGTAATGAACAGATACTCTGATCGTCCTTACTCATAATCGTATTGTATGAAGTAAATATTTTCCTTTATAGCGTTTGTTTTATAGGTTATAGTTATGATAAGATCAAAAAATTA] [-] EMBL CD137081 [ GTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGTGTGGCG AACCAGGG AAAAAAGAAATGAAGCGAATAATTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAATTTTAGTCATCTATAGCTTTGAGTAATGAACAGATACTCTGATCGTCCTTACTCATA ] [-] EMBL SMW743 [ CAGTTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGTGTGGCG AACCAGGG AAAAAAGAAATGAAGCGAATAATTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAATTTTAGTCATCTATAGCTTTGAGTAATGAACAGATACTCTGATCGTCCTTACTCATAATCGTATTGTATGAAGTAAATA ] [+] EMBL CD136820 [ TTTAAGAGCGCTTATCAAGTACTTGGATAATACATCTGATTCAGATATTGTGGAA CTC AATATA CCCACTGGTATT CCACTAGTCTATGGA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGTGTGGCG AGCCAGGG AAAAAAGAAATGGAGCGAATAATTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAATTTTAGTCATCTATAGCTTTGAGTAATGAACAGATACTCTGATCGTCCTTACTCAT ] [-] EMBL AA999292 [ ACATCTGAGTCAGATATTGTGGAACCTCAAATATC CCCACTGGTATTCCCACTAGTCTATGAACCTGGATGCGAACCTTGAAG CCAACCCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAG CAATAG CACGTGTGGCG AACCAGGG AAAAAAGAAATGAAGCGAATAATTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAATTTTAGTCATCTATAGCTTTGAGTAATGAACAGATACTCTGATCGTCCTTACTCATAATCGTATTGTATGAAGTAAATA ] [-] EMBL AA999387 [ TT CCACTAGTCTATGAA CTGGATGCGAA CTTGAAG CCAA CCAAACACTATTATCTTGCCGATGAAGCGACAGTAGCAGCAGAAAATAG CACGTGTGGCG AACCAGGG AAAAAAGAAATGAAGCGAATAATTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTTGAATAATNTTAGTCATCTATAGCTTTGAGTAATGAACAGATACTCTGATCGTCCTTACTCATAATCGTATTGTATGAAGTAAATATTTT ] [+] EMBL SM632 [ AG CCCGTGTGGCGAAACCNGGGAAAAAAAGAAATGAAGCGAATAATTATCTTTATCGATAATTTCTTCTTTATTCTTCCATCCATTAATATTTAACTCTTGTTTGGAATAATTTTAGTCATCTATAGCTTNGAGTAATGAACNGATACTCTGATCGTCCTTACTCATAATCGTATTGTATGANGTA ] consensusID : consensus_11142#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 290 fasta sequence [CTGAGGCTAAACAAGCTGGCCAACTTCTACGCCAAAATCACTTCACCTTTGATATTGCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTGATGAACTTGATCTTAACTGGATACCTGTGACAAAAACATGGCGTCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACATGGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCGCTCCTGTTCCACCTGGGGTACCGGTC] [-] EMBL CD168298 [CTGAGGCTAAACAAGCTGGCCAACTTCTACGCCAAAATCACTTCACCTTTGATATTGCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTGATGAACTTGATCTTAACTGGATACCTGTGACAAAAACATGGCGTCTAAATGAAAGAATGTACGGTGCTCTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACATGGAGAGGAACAAGTTAAAATATGGAGACGTGCTTATGATATACCTCCCGCTCCTGTTCCACCTGGGGTACCGGTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11142#0 GCTGGTGTATATCGTGGCATGGCTCCTTACAGAATTGTGTTTATTCGCCATGGAGAGAGT 60 consensus_11142#1 ------------------------------------------------------------ consensus_11142#0 GTTTACAATGAAGAAAATCGATTTTGTGGTTGGCATGATGCAGATCTTTCAGGACAAGGT 120 consensus_11142#1 ------------------------------------------------------------ consensus_11142#0 ATCACTGAGGCTAAACAAGCTGGCCAACTTCTACGCCAAAATCACTTCACCTTTGATATT 180 consensus_11142#1 ----CTGAGGCTAAACAAGCTGGCCAACTTCTACGCCAAAATCACTTCACCTTTGATATT 56 ******************************************************** consensus_11142#0 GCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTGATGAACTT 240 consensus_11142#1 GCCTATACAAGCGTTCTAAAAAGAGCCATCAAGACTTTAAACTTTGTCCTTGATGAACTT 116 ************************************************************ consensus_11142#0 GATCTTAACTGGATACCTGTGACAAAAACATGGCGTCTAAATGAAAGAATGTACGGTGCT 300 consensus_11142#1 GATCTTAACTGGATACCTGTGACAAAAACATGGCGTCTAAATGAAAGAATGTACGGTGCT 176 ************************************************************ consensus_11142#0 CTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACATGGAGAGGAACAAGTTAAAATA 360 consensus_11142#1 CTTCAAGGTCTGAATAAGTCTGAAACTGCTGCCAAACATGGAGAGGAACAAGTTAAAATA 236 ************************************************************ consensus_11142#0 TGGAGACGTGCTTATGATATACCTCCCCCTCCTGTTGACATTTCAGATCCTCGCTTCCCC 420 consensus_11142#1 TGGAGACGTGCTTATGATATACCTCCCGCTCCTGTTC-CACCTGGGGTACCGGTC----- 290 *************************** ******** ** * * * * * consensus_11142#0 GGTAATGAACCAAAGTATGCCTTACTTGACTCTTCCTGCATACCACGTACTGAGTGTTTA 480 consensus_11142#1 ------------------------------------------------------------ consensus_11142#0 AAGGACACTGTTCAACGTGTACTGCCATTTTGGTTTGATACTATTTCTGCAAGTATAAAG 540 consensus_11142#1 ------------------------------------------------------------ consensus_11142#0 AGACGCGAACAGGTTCTGATTGTCGCCCATGGAAACAGTTTAAGAGCGCTTATCAAGTAC 600 consensus_11142#1 ------------------------------------------------------------ consensus_11142#0 TTGGATAATACATCTGATTCAGATATTGTGGAACTCAATATACCCACTGGTATTCCACTA 660 consensus_11142#1 ------------------------------------------------------------ consensus_11142#0 GTCTATGAACTGGATGCGAACTTGAAGCCAACCAAACACTATTATCTTGCCGATGAAGCG 720 consensus_11142#1 ------------------------------------------------------------ consensus_11142#0 ACAGTAGCAGCAGCAATAGCACGTGTGGCGAACCAGGGAAAAAAGAAATGAAGCGAATAA 780 consensus_11142#1 ------------------------------------------------------------ consensus_11142#0 TTATCATTATCGATAATTTCTTCATTATTCATCCATCCATTAATATTTAACACATGTTTT 840 consensus_11142#1 ------------------------------------------------------------ consensus_11142#0 GAATAATTTTAGTCATCTATAGCTTTGAGTAATGAACAGATACTCTGATCGTCCTTACTC 900 consensus_11142#1 ------------------------------------------------------------ consensus_11142#0 ATAATCGTATTGTATGAAGTAAATATTTTCCTTTATAGCGTTTGTTTTATAGGTTATAGT 960 consensus_11142#1 ------------------------------------------------------------ consensus_11142#0 TATGATAAGATCAAAAAATTA 981 consensus_11142#1 --------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||