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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11143#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 724 fasta sequence
[TTTTTTTTTTTTTTTTTCATCCAACAAATTTTATTGATATACCAGAATAGAACTAGAGTTTGTTAAAAGCAGCTATATCAACTGACTGGACAAAATCTTCAAACTTCGTTATTTCTTCTTCTAACATATCAGTGCTAACCTTATCATCTTCAATAACACATGCAATTTGGAGTTTCTTAATCCCATAGGCCAAAGGGATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTTGAATACTACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATC-AAAGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGC-TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATTCTACCCTG]
[+] EMBL AI395807 [TTTTTTTTTTTTTTTTTCATCCAACAAATTTTATTGATATACCAGAATAGAACTAGAGTTTGTTAAAAGCAGCTATATCAACTGACTGGACAAAATCTTCAAACTTCGTTATTTCTTCTTCTAACATATCAGTGCTAACCTTATCATCTTCAATAACACATGCAATTTGGAGTTTCTTAATCCCATAGGCCAAAGGGATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTTGAATACTACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATC AAAGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGC TTTTTTTGCTTCGTANGCAGCCTGGCGCTCACTTCNTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATC AACTCGTCGC ]
[+] EMBL CD073898 [ AATTTTATTGATATACCAGAATAGAACTAGACTTTGTTAAAAGCAGCTATATCAACTGACTGGACAAAATCTTCAAACTTCGTTATTTCTTCTTCTAACATATCAGGGCTAACCTTATCATCTTCAATAACACATGCAATTTGGAGTTTCTTAATCCCATAGGCCAAAGGGATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTTGAATACTACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATC AAAGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCA ]
[-] EMBL CD118302 [ CAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATC AAAGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATTCTACCCTG]
[+] EMBL CD097598 [ CCCATGGTTTTACATC AAAGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATTCTACCC ]
[+] EMBL CD097604 [ CCCATGGTTTTACATC AAAGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGGGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATTCTACCC ]
[-] EMBL CD148211 [ gCCATGGTTTTACATC AAAGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGTGCGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACCTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATTCTACCCT ]
[-] EMBL CD148229 [ CCATGGTTTTACATC AAAGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGGGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAGAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAACTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATTCTACCCT ]
[-] EMBL CD110892 [ GTTTAACATC AAAGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACACCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATTCTACCCTG]
[-] EMBL CD155546 [ CATC AAAGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGCTTTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACCCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATTCTACCCTG]
[-] EMBL CD148925 [ CATCAAAAGATAACAGTAGATTTCGCAACAGAAATATTTTTAGTTGC TTTTTTTGCTTGGTAGGCAGCCGGGCGCTCACTTCTTAGTTTTTCAAACTCTTCATCATCATCAGAGACGAATAAATCAAACTGGTCGCTTGCAGCAGGTTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAGACCTTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATTC ]
[+] EMBL CD097573 [ C AAAGATAACAGCATACTTCGCAACAGGAATATTTTTAGTTGCTTTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATCGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCACGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATTCTACCCT ]
[+] EMBL CD188327 [ AAAGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATTCTACCC ]
[+] EMBL CD177765 [ TAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAA ]
consensusID : consensus_11143#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 696 fasta sequence
[TTTTTATTGATATACCAGAATAGAACTAGAGTTTGTAANAGCAGCTATATCAACTGACTGGACANAATCTTCAAACTTCGTTATTTCTTCTTCTAACATATCAGTGCTAACCTTATCATCTTCAATAACACATGCAATTTGGAGTTTCTTAATCCCATAGGCCAAAGGGATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTT-GAATACTACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA-TTTTTAGTTGC-TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA-GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC-TTTTTTC-GCTCC-GCACCAAAGGAATCAATATGTCT-GTACCA-GCGTGAAATATTGCCAAAA-TCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTGGCCTCGTGCCAAATTNTTGGCCTCG]
[-] EMBL CD079636 [TTTTTATTGATATACCAGAATAGAACTAGAGTTTGTAANAGCAGCTATATCAACTGACTGGACANAATCTTCAAACTTCGTTATTTCTTCTTCTAACATATCAGTGCTAACCTTATCATCTTCAATAACACATGCAATTTGGAGTTTCTTAATCCCATAGGCCAAAGGGATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTT GAATACTACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCCAAAA TCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTGGCCTCGTGCCAAATTNTTGGCCTCG]
[+] EMBL CD133602 [ TCAAACTTCGTTATTTCTTCTTCTAACATATCAGTGCTAACCTTATCATCTTCAATAACACATGCAATTTGGAGTTTCTTAATCCCATAGGCCAAAGGGATAAGTTTGGATGCGCCCCATAACAGCCCATCAGTTT GAATACTACGGACAGCTTTTTGCATCTCCGCCATATCAGTGTCGCCGCCCCATGGATCTACATCAAAGATAACAGTAGACTTCGCAACAGGAAT ]
[-] EMBL CD185295 [ AGTGCTAACCTTATCATCTTCAATAACACATGCAATTTGGAGTTTCTTAATCCCATAGGCCAAAGGGATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTT GAATACTACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAACCAAACTCGTCGCTTGCAGCAGGCTGA ]
[+] EMBL CD113933 [ GTGCTAACCTTATCATCTTCAATAACACATGCAATTTGGAGTTTCTTAATCCCATAGGCCAAAGGGATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTTAGAATACTACGGACAGCTTCTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCCAAAA TCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGT ]
[-] EMBL CD110990 [ TCCCATAGGCCAAAGGGATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTT GAATACTACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGGCGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAA ]
[-] EMBL CD111008 [ TCCCATAGGCCAAAGGGATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTT GAATACTACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGCTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAA ]
[+] EMBL CD137429 [ GATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTT GAATACTACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTCTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCCAAAA T ]
[-] EMBL BF936191 [ AGTTTGGATGCACCCCATAACAGCCCATCAGTTT GAATACTACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGCTTTTTTTTGCTTCGTAGGCAGCCTGGGGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGAGGTACATTTAGCTGGTTCAGGATTAGGGGATTCCGGTGCAGCAGGAAAC TTTTTTCGGCTCCGGCACCAAAGGAATCAATATGTCTGGTACCAGGCGTGAAATATTGCCAAAA TCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCA ]
[+] EMBL CD134105 [ TTCCA CCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCANAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCNCAAA TCTGATAACGATGACTTTTCAAGGGCTATNAACGTTGAAACATCTGCTTGAGTAGGCTGAAACC ]
[+] EMBL CD163609 [ GTCGTCGCCCCATGGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACA TTAGCTGGTTCGGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCCAAAA TCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTC ]
[+] EMBL CD184609 [ GTCGTCGCCCCATGGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCCAAAA TCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATC ]
[+] EMBL CD131796 [ GGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCCAAAA TCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAA ]
[-] EMBL AW017028 [ GGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCCAAAA TCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTT ]
[-] EMBL CD111937 [ CATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAGAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCCAAAA TCTGATAACGATGACTTTTCAAGGGCTATAAGCGTTGAAA ]
[-] EMBL CD110768 [ CATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCCAAAA TCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAA ]
[-] EMBL CD199625 [ AAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAA ]
[-] EMBL CD137431 [ GACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTATGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTCGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCCAAAA TCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCT ]
[-] EMBL CD171515 [ GAATATTTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAA ]
[-] EMBL CD131241 [ CAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGA ]
[-] EMBL CD120753 [ TTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCCAAAA TCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAcgtttat ]
[+] EMBL CD112809 [ ATATTGCCAAAACTCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAG ]
consensusID : consensus_11143#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 323 fasta sequence
[TTTCATTGTTTTGAATTCATTCATCCTTATGAATCTACAGTTGATAAACATATACAGATTTTCTCTTCAATACATTTAGAAACAGCGTGGGAACATAAAGAAAACGATACATCCAACAAATTTTATTGATATACCAGAATAGAACTAGAGTTTGTTAAAAGCAGCTATATCAACTGACTGGACAAAATCTTCAAACTTCGTTATTTCTTCTTCTAACATATCAGTGCTAACCTGAAAAAAAGACATCAATATTCTACTTTACAAACTCAAGAATTCTGAGAATAAAATTTTAATTAAACTTATAGATTAAATTAATGGTTTTG]
[+] EMBL CD161669 [TTTCATTGTTTTGAATTCATTCATCCTTATGAATCTACAGTTGATAAACATATACAGATTTTCTCTTCAATACATTTAGAAACAGCGTGGGAACATAAAGAAAACGATACATCCAACAAATTTTATTGATATACCAGAATAGAACTAGAGTTTGTTAAAAGCAGCTATATCAACTGACTGGACAAAATCTTCAAACTTCGTTATTTCTTCTTCTAACATATCAGTGCTAACCTGAAAAAAAGACATCAATATTCTACTTTACAAACTCAAGAATTCTGAGAATAAAATTTTAATTAAACTTATAGATTAAATTAATGGTTTT ]
[-] EMBL CD161738 [ TTCATTGTTTTGAATTCATTCATCCTTATGAATCTACAGTTGATAAACATATACAGATTTTCTCTACAATACATTTAGAAACAGCGTGGGGACATAAAGAAAACGATACATCCAACAAATTTTATTGATATACCAGAATAGAACTAGAGTTTGTTAAAAGCAGCTATATCAACTGACTGGACAAAATCTTCAAACTTCGTTATTTCTTCTTCTAACATATCAGTGCTAACCTGAAAAAAAGACATCAATATTCTACTTTACAAACTCAAGAATTCTGAGAATAAAATTTTAATTAAACTTATAGATTAAATTAATGGTTTTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11143#0 TTTTTTTTTTTTTTTTTCATCCAACAAATTTTATTGATATACCAGAATAGAACTAGAGTT 60
consensus_11143#1 ---------------------------TTTTTATTGATATACCAGAATAGAACTAGAGTT 33
consensus_11143#2 ------------------------------------------------------------
consensus_11143#0 TGTTAAAAGCAGCTATATCAACTGACTGGACAAAATCTTCAAACTTCGTTATTTCTTCTT 120
consensus_11143#1 TGT-AANAGCAGCTATATCAACTGACTGGACANAATCTTCAAACTTCGTTATTTCTTCTT 92
consensus_11143#2 ------------------------------------------------------------
consensus_11143#0 CTAACATATCAGTGCTAACCTTATCATCTTCAATAACACATGCAATTTGGAGTTTCTTAA 180
consensus_11143#1 CTAACATATCAGTGCTAACCTTATCATCTTCAATAACACATGCAATTTGGAGTTTCTTAA 152
consensus_11143#2 ------------------------------------------------------------
consensus_11143#0 TCCCATAGGCCAAAGGGATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTTGAATAC 240
consensus_11143#1 TCCCATAGGCCAAAGGGATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTTGAATAC 212
consensus_11143#2 ------------------------------------------------------------
consensus_11143#0 TACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATCAA 300
consensus_11143#1 TACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATCAA 272
consensus_11143#2 ------------------------------------------------------------
consensus_11143#0 AGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGCTTTTTTTGCTTCGTAGGCAG 360
consensus_11143#1 AGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGCTTTTTTTGCTTCGTAGGCAG 332
consensus_11143#2 ------------------------------------------------------------
consensus_11143#0 CCTGGCGCTCACTTCTTAGTTTTTCATACTC-TTCATCATCATCAGAGACGAATAAATCA 419
consensus_11143#1 CCTGGCGCTCACTTCTTAGTTTTTCATACTC-TTCATCATCATCAGAGACGAATAAATCA 391
consensus_11143#2 -------------TTTCATTGTTTTGAATTCATTCATCCTTATGAATCTACAGTTGAT-A 46
* * * * *** * ** ****** * ** * * * ** *
consensus_11143#0 AACTCGTCGCTTGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGT 479
consensus_11143#1 AACTCGTCGCTTGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGT 451
consensus_11143#2 AACATAT--------ACAGATT--TTCTCTTCAATACATTTAGAAACAGCG----TGGGA 92
*** * *** * * ** * ** ** * **** **
consensus_11143#0 GCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAA 539
consensus_11143#1 GCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAA 511
consensus_11143#2 ACATAAAGAAAACGAT---ACATCCAACAAATTTTATTGATATACCAG-AATAGAACTAG 148
** * **** * * * ** ** ** **** * * * ** *
consensus_11143#0 ATATTGCCAAAATCTG--ATAACGA-TGACTTTTCAAGGGCTATAAACGTTGAAACATCT 596
consensus_11143#1 ATATTGCCAAAATCTG--ATAACGA-TGACTTTTCAAGGGCTATAAACGTTGAAACATCT 568
consensus_11143#2 AGTTTGTTAAAAGCAGCTATATCAACTGACTGGACAAAATCTTCAAACTTCGTTATTTCT 208
* *** **** * * *** * * ***** *** ** **** * * * ***
consensus_11143#0 GCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTC 656
consensus_11143#1 GCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTC 628
consensus_11143#2 TCTT-------CTAACATATCAGTGC-TAAC--CTGAAAAAAAGACATCAATATTCTACT 258
*** ** * * * **** *** ** *** * ** *
consensus_11143#0 TTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATT 716
consensus_11143#1 TTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATT-GGCCTCGTGCCAAATTN 687
consensus_11143#2 TTACAAACTCAAGAATTCTGAGAATAA--AATTTTAATTAA--ACTTATAGATTAAATTA 314
** * *** * * * * * * ** * *** * ** *
consensus_11143#0 CTACCCTG- 724
consensus_11143#1 TTGGCCTCG 696
consensus_11143#2 ATGGTTTTG 323
* *
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||