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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11153#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 32 consensus length = 2025 fasta sequence
[TACATCATTCGTTGGGCAAATTACCCTGTATTTACATAAGTTAGTTATTGGCATAATGTCAAGTCAGTTTATGCTTGTTAGCAGATCTTATTTTTAGTCTCGTTATCTGAATGTCTGACAACTCAGAAATTTATATTTGTGCATAATGTTTAGTTGTTTTGAATATCATTGCAACAACTGGTACTT-TATTTTGTCGATGTCACCTGTCGAAGAACAACAGGGCGATAAACCTATCCAACCTAAAATTGGTATAATATATCCTCCACCTGAAGTAAGGAATATCGTCGATAAAACGGCCAGTTTTGTAGCACGTAATGGTCCAGACTTTGAATCTCGTATTCGTCAAAATGAAATCAGTAATCCAAAGTTTAATTTTCTGAATCCGGCTGATCCATACCACGCATATTATCAACACAAGGTTCGAGAGTTTGCTGAAGGAAGAACACCAGAACCTGCTGCTCTAAAATTGACTATTCCTAGTGCTGCTCGTATTACTCAGGATACTTCGAAATCGATTCAAGAAACATTTACTCCCAAGGATCCACCAGCCGAATTTGAATTTGTTTATGATCCACCTTCCATTAATGCAGTTGATATTGACATAATAAAACTTACAGCACAATTTGTTGCAAGAAACGGTCGACAATTTTTAACTCAGTTAATGAGTCGAGAACAGAGAAATTATCAGTTTGACTTCCTCCGTGCTCAGCACAGTATGTTTGGTTATTTTACAAAACTTGTGGAACAGTACACTAAAATCTTGATACCACCTAAAAATGTTATTTCGAAATTGGAGGACGAGTTAGAGAAACCGAAACAACTGCTTGACGATGTAAAATATAGGGTTGAATGGCATAAGTATCAAGAACGTCAGCGTAAGCGTGAGGAGGAGGCAGCAGAACGTGAACGTGTGGC-GTACGCTATGATTGATTGGCACGACTTCGTGGTTGTTGAAACAGTTGACTTTC-AACCAGGCGAAGCAGGCAATTTCCCTCTACCGACCACTCCTGATGAAGTTGGGGCACGCTTAC-TAG-CCGAAGAACGTGGTCTTCAGCCTCCTTTGAAGCCCTCAGCCCCTCCACCCCCCGGTTCACTTGGATTAATGCCAACTGATATAGATGATGATACAAGTGATCAGGAATTAGATGAATCAGATGATGAAAATGAAGCTTCTGGATTTTCTCAACCTAAAGGCCGAGGTCTGGTCAATCATAGCCCTCTACCATATCCCGATGAGACAGAAAAGCTGGTTAGTGATGATATCCCAACCCCACCTGTTACTAATATGACTGATATAGCTGGAGAAGATGATATGGAGTTATCAGATGATGAGAATATTGCCGAAGAACAGGTTCAACAAACAAAATTATCAACAAAACAGGTACCATTGTCTTCTGATCAAGTCATTATTCGACATGACTACGATCCAAAAGCCACAAGTATTAGAAGAGCAGAGGATTCTGTGCTTTTGGTATCACCTTTCACTGGCGAGAAGATTCCTGCCAACCAAGCTCCGAAACATATTAAGGTTGGGCTACTCGATCCTAAGTGGGTTGAACAGCGTGATCGAGAGGTTCGCGAGAAACGTGACCAAGAACAAGTTTATGCTGCGGGAAATCTGATTGATAGTAGCTTAAAGCAGCTTGCTGAGCGTCGTACAGACATTTTCGGTGTAGGAGTTGATGAAATTCAAATTGGCAAGAAATTGGGAGAACAAGAAATACTCAAGTCTGATAAGCTAATTTGGGATGGTTACTCTGCTACTACAGA-TGTTGTTGCCAAAAGAAACTTAGAAGCGGTTACTGTTAAAGATAATCTGGATTTATTAGAGTTTCAACAGAAATTGGATTCTGCTCGCGATAAAATTGGTCCTCAAAGTGGGGTGCTCCCTGCTCTGGGCATTATTCCTTCGGTACTTCATAAGCCGACAATATTGTTGCCACCACCGTCAATACAAAGTGGAGTTACACAACCTCCACCGCCCCCACCTCCTCCTGGTCTTGTAATGCTTTCCAGTGCTCCACC]
[-] EMBL CD087075 [TACATCATTCGTTGGGCAAATTACCCTGTATTTACATAAGTTAGTTATTGGCATAATGTCAAGTCAGTTTATGCTTGTTAGCAGATCTTATTTTTAGTCTCGTTATCTGAATGTCTGACAACTCAGAAATTTATATTTGTGCATAATGTTTAAGTACATTGCATA ATT TAACACCATGCACTTCAATTTTATAGATGTTACCTGTCGAAGAACAACAGGGTGATAAACCTATCCAACCTAAAATTGGTATAATATATCCTCCACCTGAAGTAAGGAATATCGTCGATAAAACGGCCAGTTTTGTAGCACGTAATGGTCCAGACTTTGAATCTCGTATTCGTCAAAATGAAATCAGTAATCCAAAGTTTAATTTTCTGAATCCGGCTGATCCATACCACGCATATTATCAACACAAGGTTCGAGAGTTTGCTGAAGGAAGAACACCAGAACCTGCTGCTCTAAAA ]
[+] EMBL CD148423 [ GTTGTTTTGAATATCATTGCAACAACTGGTACTT TATTTTGTCGATGTCACCTGTCGAAGAACAACAGGGCGGTAAACCTATCCAACCTAAAATTGGTATAATATATCCTCCACCTGAAGTAAGGAATATCGTCGATAAAACAGCCAGTTTTGTAGCACGTAATGGTCCAGACTTTGAATCTCGTATTCGTCAAAATGAAATTAGTAATCCAAAGTTCAATTTTCTGAATCCAGCTGATCCATACCACGCATATTATCAACACAAGGTTCGAGAGTTTGCTGAAGGGAGTACACCAGAACCTGCTGCTCTAAAATTGACTATTCCTAGTGCTGCTCGTCTTGCTCAAGATACTCCAAAATCAATTCAGGAAACATTTACTCCCAAGGATCCACCAGCCGAATTTGAATTTGTTTACGATCCACCTTCTATTAATGCAGTTGATATTGACATAATAAAACTTACAGCACAATTTGTTGCAAGAAACGGTCGGCAATTTTTAACTCAGTTAATGAGTCGAGAACAGAGGAATTATCAGTTTGACTTCCTCCGTGCTCAGCACAGTATGTTTGGTTATTTTACAna ]
[+] EMBL CD111244 [ gGTTGTTTTGAATATCATTGCAACAACTGGTACTT TATTTTGTCGATGTCACCTGTCGAAGAACAACAGGGCGATAAACCTATCCAACCTAAAATTGGTATAATATATCCTCCACCTGAAGTAAGGAATATCGTCGATAAAACAGCCAGTTTTGTAGCACGTAATGGTCCAGACTTTGAATCTCGTATTCGTCAAAATGAAATTAGTAATCCAAAGTTCAATTTTCTGAATCCAGCTGATCCATACCACGCATATTATCAACACAAGGTACGAGAGTTTGCTGAAGGGAGAACACCAGAACCTGCTGCTCTNAA ]
[+] EMBL CD184975 [ ATCGTCGATAAAACGGCCAGTTTTGTAGCACGTAATGGTCCAGACTTTGAATCTCGTATTCGTCAAAATGAAATCAGTAATCCAAAGTTTAATTTTCTGAATCCGGCTGATCCATACCACGCATATTATCAACACAAGGTTCGAGAGTTTGCTGAAGGAAGAACACCAGAACCTGCTGCTCTAAAATTGACTATTCCTAGTGCTGCTCGTATTACTCAGGATACTTCGAAATCGATTCAAGAAACATTTACTCCCAAGGATCCACCAGCCGAATTTGAATTTGTTTATGATCCACCTTCCATTAATGCAGTTGATATTGACATAATAAAACTTACAGCACAATTT ]
[+] EMBL CD160240 [ ATATTATCAACACAAGGTTCGAGAGTTTGCTGAAGGAAGAACACCAGAACCTGCTGCTCTAAAATTGACTATTCCTAGTGCTGCTCGTATTACTCAGGATACTTCGAAATCGATTCAAGAAACATTTACTCCCAAGGATCCACCAGCCGAATTTGAATTTGTTTATGATCCACCTTCCATTAATGCAGTTGATATTGACATAATAAAACTTACAGCACAATTTGTTGCAAGAAACGGTCGACAATTTTTAACTCAGTTAATGAGTCGAGAACAGAGAAATTATCAGTTTGACTTCCTCCGTGCTCAGCACAGTATGTTTGGTTATTTTACAAAACTTGTGGAACAGTACACTAAAATCTTGATACCACCTAAAAATGTTATTTCGAAATTGGAGGACGAGTCAGAGAAACCGAAACAACTGCTTGACGATGTAAAATATAGGGTTGAATGGCATAAGTATCAAGAACGTCAGCGTA ]
[+] EMBL CD160085 [ TATCAACACAAGGTTCGAGAGTTTGCTGAAGGAAGAACACCAGAACCTGCTGCTCTAAAATTGACTATTCCTAGTGCTGCTCGTATTACTCAGGATACTTCGAAATCGATTCAAGAAACATTTACTCCCAAGGATCCACCAGCCGAATTTGAATTTGTTTATGATCCACCTTCCATTAATGCAGTTGATATTGACATAATAAAACTTACAGCACAATTTGTTGCAAGAAACGGTCGACAATTTTTAACTCAGTTAATGAGTCGAGAACAGAGAAATTATCAGTTTGACTTCCTCCGTGCTCAGCACAGTATGTTTGGTTATTTTACAAAACTTGTGGAACAGTACACTAAAATCTTGATACCACCTTAAAATGTTATTTCGAAATTGGAGGACGAGTTTGAGAAAC ]
[+] EMBL CD160036 [ TATCAACACAAGGTTCGAGAGTTTGCTGAAGGAAGAACACCAGAACCTGCTGCTCTAAAATTGACTATTCCTAGTGCTGCTCGTATTACTCAGGATACTTCGAAATCGATTCAAGAAACATTTACTCCCAAGGATCCACCAGCCGAATTTGAATTTGTTTATGATCCACCTTCCATTAATGCAGTTGATATTGACATAATAAAACTTACAGCACAATTTGTTGCAAGAAACGGTCGACAATTTTTAACTCAGTTAATGAGTCGAGAACAGAGAAATTATCAGTTTGACTTCCTCCGTGCTCAGCACAGTATGTTTGGTTATTTTACAAAACTTGTGGAACAGTACACTAAAATCTTGATACCACCTAAAAATGTTATTTCGAAATTGGAGGACGAGTTAGAGAAACCGAAACAACTGCTTGAC ]
[+] EMBL CD160049 [ TATCAACACAAGGTTCGAGAGTTTGCTGAAGGAAGGACACCAGAACCTGCTGCTCTAAGATTGACTATTCCTAGTGCTGCTCGTATTACTCAGGATACTTCGAAATCGATTCAAGAAACATTTACTCCCAAGGATCCACCAGCCGAATTTGAATTTGTTTATGATCCACCTTCCATTAATGCAGTTGATATTGACATAATAAAACTTACAGCACAATTTGTTGCAAGAAACGGTCGACAATTTTTAACTCAGTTAATGAGTCGAGAACAGAGAAATTATCAGTTTGACTTCCTCCGTGCTCAGCACAGTATGTTTGGTTATTTTACAAAACTTGTGGAACAGTACACTAAAATCTTGATACCACCTAAAAATGTTATTTCGAAATTGGAGGACGAGTTAGAGAAACCGAAACAACTGCTTGACGATGTAAAATATgg ]
[+] EMBL CD160203 [ TATCAACACAAGGTTCGAGAGTCTGCTGAAGGAAGAACACCAGAACCTGCTGCTCTAAAATTGACTATTCCTAGTGCTGCTCGTATTACTCAGGATACTTCGAAATCGATTCAAGAAACATTTACTCCCAAGGATCCACCAGCCGAATTTGAATTTGTTTATGATCCACCTTCCATTAATGCAGTTGATATTGACATAATAAAACTTACAGCACAATTTGTTGCAAGAAACGGTCGACAATTTTTAACTCAGTTAATGAGTCGAGAACAGAGAAATTATCAGTTTGACTTCCTCCGTGCTCAGCACAGTATGTTTGGTTATTTTACAAAAGTTGTGGAACAGTACACTAAAATCTTGATACCACCTAAAAATGTTATTTCGAAATTGGAGGACGAGTTAGAGAAAGCGAAACAAGTGCTTGACGATG ]
[+] EMBL CD163137 [ CTATTCCTAGTGCTGCTCGTCTTGCTCAAGATACTCCAAAATCAATTCAGGAAACATTTACTCCCAAGGATCCACCAGCCGAATTTGAATTTGTTTACGATCCACCTTCTATTAATGCAGTTGATATTGACATAATAAAACTTACAGCACAATTTGTTGCAAGAAACGGTCGGCAATTTTTAACTCAGTTAATGAGTCGAGAACAGAGGAATTATCAGTTTGACTTCCTCCGTGCTCAGCACAGTATGTTTGGTTATTTTACAAAACTTGTGGAACAGTACACTAAAATCTTGATACCACCTAAAGATGTTATCTCGAAATTAGAGGACGAGTTGGAGAAACCGAAACAACTGCTTGACGATGTAAAATATAGGGTTGAATGGCATAAGTATCAAGAACGTCA ]
[+] EMBL CD163127 [ CTATTCCTAGTGCTGCTCGTCTTGCTCAAGATACTCCAAAATCAATTCAGGAAACATTTACTCCCAAGGATCCACCAGCCGAATTTGAATTTGTTTACGATCCACCTTCTATTAATGCAGTTGATATTGACATAATAAAACTTACAGCACAATTTGTTGCAAGAAACGGTCGGCAATTTTTAACTCAGTTAATGAGTCGAGAACAGAGGAATTATCAGTTTGACTTCCTCCGTGCTCAGCACAGTATGTTTGGTTATTTTACAAAACTTGTGGAACAGTACACTAAAATCTTGATACCACCTAAAGATGTTATCTCGAAATTAGAGGACGAGTTAGAGAAACCGAAACAACTGCTTGACGATGTAAAATATAGGGTTGAATGGCATAAGTATCAAGAACGTCc ]
[+] EMBL CD163094 [ CTATTCCTAGTGCTGCTCGTCTTGCTCAAGATACTCCAAAATCAATTCAGGAAACATTTACTCCCAAGGATCCACCAGCCGAATTTGAATTTGTTTACGATCCACCTTCTATTAATGCAGTTGATATTGACATAATAAAACTTACAGCACAATTTGTTGCAAGAAACGGTCGGCAATTTTTAACTCAGTTAATGAGTCGAGAACAGAGGAATTATCAGTTTGACTTCCTCCGTGCTCAGCACAGTATGTTTGGTTATTTTACAAAACTTGTGGAACAGTACACTAAAATCTTGATACCACCTAAAGATGTTATCTCGAAATTAGAGGACGAGTTAGAGAAACCGAAACAACTGCTTGACGATGTAAAATATAGGGTTGAATGGCATAAGTATCAAGAACGTCA ]
[-] EMBL CD163488 [ TATTCCTAGTGCTGCTCGTCTTGCTCAAGATACTCCAAAATCAATTCAGGAAACATTTACTCCCAAGGATCCACCAGCCGAATTTGAATTTGTTTACGATCCACCTTCTATTAATGCAGTTGATATTGACATAATAAAACTTACAGCACAATTTGTTGCAAGAAACGGTCGGCAATTTTTAACTCAGTTAATGAGCCGAGAACAGAGGAATTATCAGTTTGACTTCCTCCGTGCTCAGCACAGTATGTTTGGTTATTTTACAAAACTTGTGGAACAGTACACTAAAATCTTGATACCACCTAAAGATGTTATCTCGAAATTAGAGGACAAGTTAGAGAAACCGAAACAACTGCTTGACGATGTAAAATATAGGGTTGAATGGCATAAGTATCAAGAACGTCAa ]
[-] EMBL CD116878 [ TACTCCCAAGGATCCACCAGCCGAATTTGAATTTGTTTATGATCCACCTTCCATTAATGCAGTTGATATTGACATAATAAAACTTACAGCACAATTTGTTGCAAGAAACGGTCGACAATTTTTAACTCAGTTAATGAGTCGAGAACAGAGAAATTATCAGTTTGACTTCCTCCGTGCTCAGCACAGTATGTTTGGTTATTTTACAAAACTTGTGGAACAGTACACTAAAAT ]
[-] EMBL CD129526 [ TGAATTTGTTTATGATCCACCTTCCATTAATGCAGTTGATATTGACATAATAAAACTTACAGCACAATTTGTTGCAAGAAACGGTCGACAATTTTTAACTCAGTTAATGAGTCGAGAACAGAGAAATTATCAGTTTGACTTCCTCCGTGCTCAGCACAGTATGTTTGGTTATTTTACAAAACTTGTGGAACAGTACACTAAAATCTTGATACCACCTAAAAATGTTATTTCGAAATTGGAGGACGAGTTAGAGAAACCGAAACAACTGCTTGACGATGTAAAATATAGGGTTGAATGGCATAAGTATCAAGAACGTCAGCGTAAGCGTGAGGAGGAGGCAGCAGAACGTGAACGTGTGGC GCACGCTATGATTGATTGGCACGACTTCGTGGTTGTTGAAACAGTTGACTTTC AACCAGGCGAAGCAGGCAATTTCCCTCT ]
[+] EMBL CD152512 [ TACAGCACAATTTGTTGCAAAAAACGGTCGGCAATTATTAACTCACCTAATGAGTCAAGACCACAGGAATTATCACCTGGACTTCCTCCGTGCTCAGCACAGTATGTTTGGTTATTTTACAAAACTTGTGGAACAGTACACTAAAATCTTGATACCACCTACACATGTTATCTCGAAATTACAGGACGAGTTAGAGAAACCGAAACAACTGCTTGACGATGTAAAATATAGGGTTGAATGGCATAAGTATCAAGAACGTCAACGTAAGCGTGAGGAGGAAGCTGCAGAACGTGAACGTG ]
[-] EMBL CD160134 [ GGTCGACAATTTTAAACTCAGTTAATGAGTCGAGAACAGAGAAATTATCAGTTTGACTTCCTCCGTGCTCAGCACAGTATGTTTGGTTATTTTACAAAACTTGTGGAACAGTACACTAAAATCTTGATACCACCTAGAAATGTTATTTCGAAAATGGAGGACGAGTTAGAGAAACCGAAACAACTGCTTGACGATGTAAAATATAGGGTTGAATGGCATAAGTATCAAGAACGTCAGCGTAAGCGTGAGGAGGAGGCAGCAGAACGTGAACGTCTGGCAGTACGCTATGATTGATTGGCACGACTTCGTGGTTGTTGAAACAGTTGACTTTC AACCAGGCGAAGCAGGCAATTTCCCTCTACCGACCACTCCTGATGAAGTTGGGGCACGCTTAA TAGTCCGAAGAAC ]
[+] EMBL CD166115 [ ATTATCAGTTTGACTTCCTCCGTGCTCAGCACAGTATGTTTGGTTATTTTACAAAACTTGTGGAACAGTACACTAAAATCTTGATACCACCTAAAGATGTTATCTCGAGATTGGAGGACGAGTTAGAGAAACCGAAACAACTGCTTGACGATGTAAAATATAGGGTTGAATGGCATAAGTATCAAGAACGTCAACGTAAGCGTGAGGAGGAGGCTGCAGAACGTGAACGTGTGGC GTACGCAATGATTGATTGGCACGACTTCGTGGTTGTTGAAACAGATGACTTTCAAACCA ACGAAACAGGTAATTTCNCTTTACCGACTACTCC ]
[+] EMBL CD193304 [ GAGAAACCGAAACAACTGCTTGACGATGTAAAATATAGGGTTGAATGGCATAAGTATCAAGAACGTCAGCGTAAGCGTGAGGAGGAGGCAGCAGAACGTGAACGTGTGGC GTACGCTATGATTGATTGGCACGACTTCGTGGTTGTTGAAACAGTTGACTTTC AACCAGGCGAAGCAGGCAATTTCCCT ]
[-] EMBL CD160216 [ aCAGCAGAACGTGAACGTGTGGC GTACGCTATGATTGATTGGCACGACTTCGTGGTTGTTGAAACAGTTGACTTTC AACCAGGCGAAGCAGGCAATTTCCCTCTACCGACCACTCCTGATGAAGTTGGGGCACGCTTACATAG CCGAAGAAC ]
[+] EMBL CD078722 [ GTGTGGC GTACGCAATGATTGATTGGCACGACTTCGTGGTTGTTGAAACAGTTGACTTTC AACCAAACGAAACAGGTAATTTCCCTTTACCGACTACTCCTGATGAAGTTGGAGCACGCTTAC TAG CCGAAGAACGTGGTCTTCAGCCTCCTTTGAAGCCCTCAGCCCCTCCACCCCCCGGTTCACTTGGATTAATGCCAACTGATATAGATGATGATACAAGTGATCAGGAATTAGATGAATCAGATGATGAAAATGAAGCTTCTGGATTTTCTCAACCTAAAGGCCGAGGTCTGGTCAATCATAGCCCTCTACCATATCCCGATGAGACAGAAAAGCTGGTTAGTGATGATATCCCAACCCCACCTGTTACTAATATGACTGATATAGCTGGAGAAGATGATATGGAGTTATCAGATGATGAGAATATTGCCGAAGAACAGGTTCAACAAACAAAATTATCAACAAAACAGGTACCATTGTCTTCTGATCAAGTCATTATTCGACATGACTACGATCCANAAGCCACAAGTATTAGAAGAGCAGAGGATTCTGTGCTTTTGGTATCACCTTTCACT ]
[-] EMBL CD158686 [ TCGTGGTTGTTGAAACAGTTGACTTTC AACCAGGCGAAGCAGGCAATTTCCCTCTACCGACCACTCCTGATGAAGTTGGGGCACGCTTAC TAG CCGAAGAAC ]
[+] EMBL CD115679 [ ctggcacgtTTGAAACAGTTGACTTTC AACCAAACGAAACAGGTAATTTCCCTTTACCGACTACTCCTGATGAAGTTGGAGCACGCTTAC TAG CCGAAGAACGTGGTCTTCAGCCTCCTTTGAAGCCCTCAGCCCCTCCACCCCCCGGTTCACTTGGATTAATGCCAACTGATATAGATGATGATACACGTGATCAGGAATTAGATGAATCACATGATGAAAATGACGCTcc ]
[+] EMBL CD088539 [ TGATACAAGTGATCAGGAATCAGATGGATCAGATATTGAAAATGAAGCTTCTGGGTCTTCTCAAACTAAAGGCCAAGGTTTAGTCAACCATAGCCCTCTACCATACCCTGATGAGACAGAAAAACTGGTTACTGATGATATCCCGACCCCACCTGATACAAATATGACTGGCATAGCTGGAGAAGATGATATGGAGTTGTCAGATGATGAGAATGTTGTTGAAGAGCCTGTTCAAAAAACAAAAGTATCAGCAAAACAGGTACCATTGCCTTCTGATCAAGTCATTATTCGACATGACTACGATCCAAAAGCTACAAATATTAGAAGAGCAGAGAATTCTGTGCTTTTGGTATCACCTTTCACTGGCGAGAAGATTCCTGCCAACCAAGCTCCGAAACATATTAAGGTTGGGCTACTCGATCCTAAGTGGGTTGAACAGCGTGATCGAGAGATTCGCGAGAAACGTGAACAAGAACAAGTTTATGCTGCGGGAAATCTGATTGATAGTAGCTTGAAGCAGCTTGCTGAGCGTCGTACAGACATTNTCGGTGTAGGAG ]
[+] EMBL CD120172 [ GAAGCTTTTGGCTTTTCTCAACCTAAAGGCCGAGGTCTGGTCAATCATAGCCCTCTACCATATCCCGATGAGACAGAAAAGCTGGTTAGTGATGATATCCCAACCCCACCTGTTACTAATATGACTGATATAGCTG ]
[-] EMBL CD094366 [ AGGTCTGGTCAATCATAGCCCTCTACCATATCCCGATGAGACAGAANAGCTGGTTAGTGATGATATCCCAACCCCACCTGTTACTAATATGACTGATATAGCTGGAGAAGATGATATGGAGTTATCAGATGATGAGAATATTGCCGAAGAACAGGTTCAACAAACAAAATTATCAACAAAACAGGTACCATTGTCTTCTGATCAAGTCATTATTCGACATGACTACGATCCAAAAGCCACAAGTATTAGAAGAGCAGAGGATTCTGTGCTTTTGGTATCACCTTTCACTGGCGAGAAGATTCCTGCCAACCAAGCTCCGAAACATATTAAGGTTGGGCTACTCGATCCTAAGTGGGTTGAACAGCGTGATCGAGAGGTTCGCGAGAAACGTGACCAAGAACAAGTTTATGCTGCGGGAAATCTGATTGATAGTAGCTTAAAGCAGCTTGCTGAGCGTCGTACAGACATTTTCGGTGTAGGAGTTGATGAAATTCA ]
[+] EMBL CD112783 [ ACGATCCAAAAGCCACAAGTATTAGAAGAGCAGAGGATTCTGTGCTTTTGGTATCACCTTTCACTGGCGAGAAGATTCCTGCCAACCAAGCTCCGAAACATATTAAGGTTGGGCTACTCGATCCTAAGTGGGTTGAACAGCGTGATCGAGAGGTTCGCGAGAAACGTGACCAAGAACAAGTTTATGCTGCGGGAAATCTGATTGATAGTAGCTTAAA ]
[-] EMBL CD181248 [ GATCGAGAGGTTCGCGAGAAACGTGACCAAGAACAAGTTTATGCTGCGGGAAATCTGATTGATAGTAGCTTAAAGCAGCTTGCTGAGCGTCGTACAGACATTTTCGGTGTAGGAGCTGATGAAATTCAAATTGGCAAGAAATTGGGAGAACAAGAAATACTCAAGTCTGATAAGCTAATTTGGGATGGTTACTCTGCTACTACAGAGTGTTGTTGCCAAA ]
[+] EMBL CD181647 [ TCGGTGTAGGAGTTGACGAAACTCAGATTGGCAAGAAATTGGGAGAACAAGAAATAGTCAAGTCTGATAAATTAATTTGGGATGGTTACTCTGCTACTACAGA TGTTGTTGCCAAAAGAAACTTAGAAGCGGTTACTGTTAAAGATAATCTGGATTTATTAGAGTT ]
[-] EMBL CD117427 [ AATTTGGGATGGTTACTCTGCTACTACAGA TGTTGTTGCCAAAAGAAACTTAGAAGCAGTTACTGTTAAAGATAGGCTGAATTTATTAGAGTTTCAACAGAAATTGGATTCTGCTCGCGATAAAATTGGTCCTCAAAGTGGGGTGCTCCCTGCTCTGGGCATTATTCCTTCGGTACTTCATAAGCCGACAATATTGTTGCCACCACCGTCAATACAAAGTGGAGTTACACAACCTCCACCGCCCCCACCTCCTCCTGGTCTTGTAATGCTTTCCAGTGCTCCACC]
[-] EMBL CD117429 [ AATTTGGGATGGTTACTCTGCTACTACAGA TGTTGTTGCCAAAAGAAACTTAGAAGCAGTTACTGTTAAAGATAGGCTGAATTTATTAGAGTTTCAACAGAAATTGGATTCTGCTCGCGATAAAATTGGTCCTCAAAGTGGGGTGCTCCCTGCTCTGGGCATTATTCCTTCGGTACTTCATAAGCCGACAATATTGTTGCCACCACCGTCAATACAAAGTGGAGTTACACAACCTCCACCGCCCCCACCTCCTCCTGGTCTTGTAATGCTTTCCAGTGCTCCACC]
[+] EMBL CD136243 [ AACTTAGAAGCGGTTACTGTTAAAGATAATCTGGATTTATTAGAGTTTCAACAGAAGTTGGATTCTGCTCGCGATAAAATTGGTCCTCAAAGTGGAGTGCTCCCTGCTCTAGGCATTATTCCTTCG ]
consensusID : consensus_11153#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 505 fasta sequence
[TGTGATTTGTTGCATGATGTTACCTGTCGAAGAACAACAGGGTGATAAACCTATCCAACCTAAAATTGGTATAATATATCCTCCACCTGAAGTAAGGAATATCGTCGATAAAACGGCCAGTTTTGTAGCACGTAATGGTCCAGACTTTGAATCTCGTATTCGTCAAAATGAAATCAGTAATCCAAAGTTTAATTTTCTGAATCCGGCTGATCCATACCACGCATATTATCAACACAAGGTTCGAGAGTTTGCTGAAGGAAGAACACCAGAACCTGCTGCTCTAAAATTGACTATTCCTAGTGCTGCTCGTATTACTCANGATACTTCGAAATCGATTCAAGAAACATTTACTCCCAAGGATCCACCAGCCGAATTTGAATTTGTTTATGATCCACCTTCCATTAATGCAGTTGATATTGACATAATAAAACTTACAGCACAATTTGTTGCAAGAAACGGTCGACAATTTTTAACTCAGTTAATGAGTCGAGAACAGAGAAATTTT]
[+] EMBL AI976086 [TGTGATTTGTTGCATGATGTTACCTGTCGAAGAACAACAGGGTGATAAACCTATCCAACCTAAAATTGGTATAATATATCCTCCACCTGAAGTAAGGAATATCGTCGATAAAACGGCCAGTTTTGTAGCACGTAATGGTCCAGACTTTGAATCTCGTATTCGTCAAAATGAAATCAGTAATCCAAAGTTTAATTTTCTGAATCCGGCTGATCCATACCACGCATATTATCAACACAAGGTTCGAGAGTTTGCTGAAGGAAGAACACCAGAACCTGCTGCTCTAAAATTGACTATTCCTAGTGCTGCTCGTATTACTCANGATACTTCGAAATCGATTCAAGAAACATTTACTCCCAAGGATCCACCAGCCGAATTTGAATTTGTTTATGATCCACCTTCCATTAATGCAGTTGATATTGACATAATAAAACTTACAGCACAATTTGTTGCAAGAAACGGTCGACAATTTTTAACTCAGTTAATGAGTCGAGAACAGAGAAATTTT]
consensusID : consensus_11153#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 463 fasta sequence
[TGTTACAAGCGATCAGGAATCAGATGGATCAGATATTGANNNNGAAGCTTCTGGGTCTTCTCAAACTAAAGGCCAAGGTTTAGTCAACCATAGCCCTCTACCATACCCTGATGAGACAGAAAAACTGGTTACTGATGATATCCCGACCCCACCTGATACAAATCCTTCCGGCATAGNTGGAGAAGATGATATGGAGTTGTCAGATGATGAGAATGTTGTTGAAGAGCCTGTTCAAAAAACAAAAGTATCAGCAAAACAGGTACCATTGCCTTCTGATCAAGTCATTATTCGACATGACTACGATCCAAAAGCTACAAATATTAGAAGAGCAGAGAATTCCACGCTTTTGGTATCACCTTTCACTGGCGAGAAGATTCCTGCCAACCAAGCTCCGAAACATATTAAGGTTGGGCTACTCGATCCTAAGTGGGTTGAACAGCGTGATCGAGAGATTCGCGAGAAA]
[+] EMBL CD088562 [TGTTACAAGCGATCAGGAATCAGATGGATCAGATATTGANNNNGAAGCTTCTGGGTCTTCTCAAACTAAAGGCCAAGGTTTAGTCAACCATAGCCCTCTACCATACCCTGATGAGACAGAAAAACTGGTTACTGATGATATCCCGACCCCACCTGATACAAATCCTTCCGGCATAGNTGGAGAAGATGATATGGAGTTGTCAGATGATGAGAATGTTGTTGAAGAGCCTGTTCAAAAAACAAAAGTATCAGCAAAACAGGTACCATTGCCTTCTGATCAAGTCATTATTCGACATGACTACGATCCAAAAGCTACAAATATTAGAAGAGCAGAGAATTCCACGCTTTTGGTATCACCTTTCACTGGCGAGAAGATTCCTGCCAACCAAGCTCCGAAACATATTAAGGTTGGGCTACTCGATCCTAAGTGGGTTGAACAGCGTGATCGAGAGA ]
[+] EMBL CD201656 [ gactGGCATAGCTGGAGAAGATGATATGGTGTTGTCAGATGATGAGAATGTTGTTGAAGAGCCTGTTCAAAAAACAAAAGTATCAGCAAAACAGGTACCATTGCCTTCTGATCAAGTCATTATTCGACATGACTACGATCCAAAAGCTACAAATATTAGAAGAGCAGAGAATTCTGTGCTTTTGGTATCACCTTTCACTGGCGAGAAGATTCCTGCCAACCAAGCTCCGAAACATATTAAGGTTGGGCTACTCGATCCTAAGTGGGTTGAACAGCGTGATCGAGAGATTCGCGAGAAA]
consensusID : consensus_11153#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 167 fasta sequence
[CCATTTAGATAACNAANCTAAAAATAAGATCTGCTAACAAGCATAAACTGACTTGACATCATACCAACAACTAACTAGTGTAATACAAGGTAATTCGCCCAACGAATTCCTACAGGATGTATTTTAGATACCAAGAAAATAAACTAAAACCTAAGGGAAATGGATAG]
[+] EMBL CD201675 [CCATTTAGATAACNAANCTAAAAATAAGATCTGCTAACAAGCATAAACTGACTTGACATCATACCAACAACTAACTAGTGTAATACAAGGTAATTCGCCCAACGAATTCCTACAGGATGTATTTTAGATACCAAGAAAATAAACTAAAACCTAAGGGAAATGGATAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11153#0 TACATCATTCGTTGGGCAAATTACCCTGTATTTACATAAGTTAGTTATTGGCATAATGTC 60
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 AAGTCAGTTTATGCTTGTTAGCAGATCTTATTTTTAGTCTCGTTATCTGAATGTCTGACA 120
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 ACTCAGAAATTTATATTTGTGCATAATGTTTAGTTGTTTTGAATATCATTGCAACAACTG 180
consensus_11153#1 -----------------------------------------------------------T 1
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 GTACTTTATTTTGTCGATGTCACCTGTCGAAGAACAACAGGGCGATAAACCTATCCAACC 240
consensus_11153#1 GTGATTTGTTGCAT-GATGTTACCTGTCGAAGAACAACAGGGTGATAAACCTATCCAACC 60
consensus_11153#2 -----------------TGTTACAAG-CGATCAGGAATCAGATGGATCAGATATTGANNN 42
consensus_11153#3 ---------------------------------CCATTTAGATAACNAANCTA--AAAAT 25
* * * ** *
consensus_11153#0 TAAAATTGGTATAATATATCCTCCACCTGAAGTAAGGAATATCGTCGATAAAACGGCCAG 300
consensus_11153#1 TAAAATTGGTATAATATATCCTCCACCTGAAGTAAGGAATATCGTCGATAAAACGGCCAG 120
consensus_11153#2 NGAAGCTTCTGGG---TCTTCTCAAACTAAAGGCCAAGGTTTAGTCAACCA------TAG 93
consensus_11153#3 AAGATCTGCTAACAAGCATAAACTGACTTGA---CATCATACCAACAACTA-------AC 75
* * * * * ** * * * * * *
consensus_11153#0 TTTTGTAGCACGTAATGGTCCAGACTTTGAATCTCGTATTCGTCAAAATGAAATCAGTAA 360
consensus_11153#1 TTTTGTAGCACGTAATGGTCCAGACTTTGAATCTCGTATTCGTCAAAATGAAATCAGTAA 180
consensus_11153#2 CCCTCTACCATACCCTGATG-AGACAGAAAAACTGGTTACTGATGATATCCCGACCCCA- 151
consensus_11153#3 TAGTGTAATACAAGGTAATTCGCCCAACGAATTCC-TACAGGATGTATTTTAGATACCAA 134
* ** * * * * ** * * * *
consensus_11153#0 TCCAAAGTTTAATTTTCTGAATCCGGCTGATCCATACCACGCATATTATCAACACAAGGT 420
consensus_11153#1 TCCAAAGTTTAATTTTCTGAATCCGGCTGATCCATACCACGCATATTATCAACACAAGGT 240
consensus_11153#2 -CCTGATACAAATCCTTCCGGCATAGNTGGAGAAGATGAT--ATGGAGTTGTCAGATGAT 208
consensus_11153#3 ---GAAAATAAACTA---AAACCTAAGGGAAATGGATAG--------------------- 167
* ** * *
consensus_11153#0 TCGAGAGTTTGCTGAAGGAAGAACACCAGAACCTGCTGCTCTAAAATTGACTATTCCTAG 480
consensus_11153#1 TCGAGAGTTTGCTGAAGGAAGAACACCAGAACCTGCTGCTCTAAAATTGACTATTCCTAG 300
consensus_11153#2 GAGAATGTT-GTTGAAGAGCCTGTTCAAAAAACAAAAGTATCAGCAA-AACAGGTACCAT 266
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 TGCTGCTCGTATTACTCAGGATACTTCGAAAT--CGATTCAAGAAACATTTACTCCCAAG 538
consensus_11153#1 TGCTGCTCGTATTACTCANGATACTTCGAAAT--CGATTCAAGAAACATTTACTCCCAAG 358
consensus_11153#2 TGCCTTCTGATCAAGTCATTATTCGACATGACTACGATCCAAAAGCTACAAATATTAGAA 326
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 GATCCACCAGCCGAATTTGAATTTGTTTATGATCCACCTTCCATTAATGCAGTTGATATT 598
consensus_11153#1 GATCCACCAGCCGAATTTGAATTTGTTTATGATCCACCTTCCATTAATGCAGTTGATATT 418
consensus_11153#2 GAGCAGA-----GAATTCCACGCTTTTGGTA--TCACCTTTCACTGGCG-AGAAGATTCC 378
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 GACATAATAAAACTTACAGCACAATTTGTTGCAAGAAACGGTCGACAATTTTTAACTCAG 658
consensus_11153#1 GACATAATAAAACTTACAGCACAATTTGTTGCAAGAAACGGTCGACAATTTTTAACTCAG 478
consensus_11153#2 TGC-CAACCAAGCTC----CGAAACATATT--AAGGTTGGGCTACTCGATCCTAAGTGGG 431
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 TTAATGAGTCGAGAACAGAGAAATTATCAGTTTGACTTCCTCCGTGCTCAGCACAGTATG 718
consensus_11153#1 TTAATGAGTCGAGAACAGAGAAATTTT--------------------------------- 505
consensus_11153#2 TTGAACAG-CGTGATC-GAGAGATTCGCGAGAAA-------------------------- 463
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 TTTGGTTATTTTACAAAACTTGTGGAACAGTACACTAAAATCTTGATACCACCTAAAAAT 778
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 GTTATTTCGAAATTGGAGGACGAGTTAGAGAAACCGAAACAACTGCTTGACGATGTAAAA 838
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 TATAGGGTTGAATGGCATAAGTATCAAGAACGTCAGCGTAAGCGTGAGGAGGAGGCAGCA 898
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 GAACGTGAACGTGTGGCGTACGCTATGATTGATTGGCACGACTTCGTGGTTGTTGAAACA 958
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 GTTGACTTTCAACCAGGCGAAGCAGGCAATTTCCCTCTACCGACCACTCCTGATGAAGTT 1018
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 GGGGCACGCTTACTAGCCGAAGAACGTGGTCTTCAGCCTCCTTTGAAGCCCTCAGCCCCT 1078
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 CCACCCCCCGGTTCACTTGGATTAATGCCAACTGATATAGATGATGATACAAGTGATCAG 1138
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 GAATTAGATGAATCAGATGATGAAAATGAAGCTTCTGGATTTTCTCAACCTAAAGGCCGA 1198
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 GGTCTGGTCAATCATAGCCCTCTACCATATCCCGATGAGACAGAAAAGCTGGTTAGTGAT 1258
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 GATATCCCAACCCCACCTGTTACTAATATGACTGATATAGCTGGAGAAGATGATATGGAG 1318
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 TTATCAGATGATGAGAATATTGCCGAAGAACAGGTTCAACAAACAAAATTATCAACAAAA 1378
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 CAGGTACCATTGTCTTCTGATCAAGTCATTATTCGACATGACTACGATCCAAAAGCCACA 1438
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 AGTATTAGAAGAGCAGAGGATTCTGTGCTTTTGGTATCACCTTTCACTGGCGAGAAGATT 1498
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 CCTGCCAACCAAGCTCCGAAACATATTAAGGTTGGGCTACTCGATCCTAAGTGGGTTGAA 1558
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 CAGCGTGATCGAGAGGTTCGCGAGAAACGTGACCAAGAACAAGTTTATGCTGCGGGAAAT 1618
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 CTGATTGATAGTAGCTTAAAGCAGCTTGCTGAGCGTCGTACAGACATTTTCGGTGTAGGA 1678
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 GTTGATGAAATTCAAATTGGCAAGAAATTGGGAGAACAAGAAATACTCAAGTCTGATAAG 1738
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 CTAATTTGGGATGGTTACTCTGCTACTACAGATGTTGTTGCCAAAAGAAACTTAGAAGCG 1798
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 GTTACTGTTAAAGATAATCTGGATTTATTAGAGTTTCAACAGAAATTGGATTCTGCTCGC 1858
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 GATAAAATTGGTCCTCAAAGTGGGGTGCTCCCTGCTCTGGGCATTATTCCTTCGGTACTT 1918
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 CATAAGCCGACAATATTGTTGCCACCACCGTCAATACAAAGTGGAGTTACACAACCTCCA 1978
consensus_11153#1 ------------------------------------------------------------
consensus_11153#2 ------------------------------------------------------------
consensus_11153#3 ------------------------------------------------------------
consensus_11153#0 CCGCCCCCACCTCCTCCTGGTCTTGTAATGCTTTCCAGTGCTCCACC 2025
consensus_11153#1 -----------------------------------------------
consensus_11153#2 -----------------------------------------------
consensus_11153#3 -----------------------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||