These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11156#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 34 consensus length = 1752 fasta sequence [GAAGGACATGCGTATTAAGACGGCTGATGTAACTGCTTTGAAGGGAAGCAGCTTTGAAGACTTTTGTTTGAAGAGAGATATCTTGAAGGGTATATACGAAAAAGGTTGGGAGTCCCCGTCCCCTATTCAAGAATCCAGCATACCAATAGCGCTAACGCACAGAGATATAATGGCAAGAGCCAAGAATGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATAGAACTTGCCAAACATACGGCTATTAAAATCATGCTGGTAATTGGTGGCACACTGCTTAAAGATGATTTGATAAGACTAAGTCAAACCGTTCATGTTTTAATCGGTACTCCTGGTCGTTTAGTAGACTTACTAAGCAGGGGACTCAT-TGACATATCCAAGTGTAAAATTGTTGTTCTTGATGAAGCAGACAAACTACTGTCTGAAGAGCTCATAAGTGGAGTCGAAGAGATTCTCAATGGTGTGGATAAAAGTCGCCAAGTTCTCGTTTACTCAGCAACGTACCCAGTTACAGTTCAGTCATTTATGAATCAGCATTTGC-GCAATCCCTACCAAATAAATTTAATGGAGACATTAACGTTGAAAGGAATTACTGAATATTATGCATATGTACAGGAAAAACATAAGGTACACTGCTTGAATACATTGTTTTCCAAACTACAGATCAGCCAGTCCATAATTTTCTGTAGTTCAGCACAACGAGTCGAACTTCTTGCCAAAAAAATCACCCAGTTGGGATATTCCTGTTATTATATACATGCACGGATGTCTCAGCAGGACCGCAACAGAGTCTTTCATGATTTTCGGAATGGTTGCTGCCGCAACCTTGTTTGTACAGACCTTTTGACTCGTGGAATTGACATTCCGACTGTGAATGTTGTTATAAATTTTGACTTCCCAAAATATTCTGAAACCTATTTGCATCGTATTGGTAGATCTGGTCGTTTTGGTCATTTGGGCATTGCCATAAACTTGGTTACGTATGCCGATAGATATTCATTAAAAACAGTGGAAACAGAACTGGTTACTGAAATCAAACCAATTCCTAAAGAAATCGACAAGCGGTTATATGTTGCGGAGTACC-AAAATGAAAATAATTTGGATCCAATGACAAGAGAGGCGCTGTTTAATGGTCGTGGGTTGCCTTCAGGCAACAAGGATGAGGTTGTAAACAATCATTAATATATATGACTTCCCGGTGACTTCTGGGCATTTACCTAAGATGCTCGCCACTTT-AGAAT-CCCTAATTTTTTGA-GTTTAGGTTATCCCTATTATTTTCTTCGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGTATAGTTTAATTTTTCCCATCTGTCCTTTTCAG-TTGGGATTTGTTTTTTCAAATGTTTATTTTTTTGTTATTATAATTAACCCTAACCAGAACTCCCCGTTCCCCTGTATTATATCCCAAATGTACAGTTAGCTTATATGTTCATGATATTAATGAATGTTTGCCATCCGTGTCGCTTTGAAAGTCCCCTGTGGCTTTGTAGCATCCAAATGATGGCTTTGAGGAGTGTTTTGGATCTACTCGCCACCCACCCCATATTCTGTATGTGGTCAGTGTTGCCCTCATTCGCTTGCTCTTGGCTGTTGTTATTATCCAGGAAGCTGACCAATGGTGTTTTT] [+] EMBL CD202970 [GAAGGACATGCGTATTAAGACGGCTGATGTAACTGCTTTGAAGGGAAGCAGCTTTGAAGACTTTTGTTTGAAGAGAGATATCTTGAAGGGTATATACGAAAAAGGTTGGGAGTCCCCGTCCCCTATTCAAGAATCCAGCATACCAATAGCGCTAACGCACAGAGATATAATGGCAAGAGCCAAGAATGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATAGAACTTGCCAAACATACGGCTATT ] [-] EMBL CD161630 [ AAGGACATGCGTATTAAGACGGCTGATGTAACTGCTCCGAAGGCAAGCAGCTTTGAAGACTTTTG TTGAACAGAGATATCTTGAAGGGTATATCCGACAAAGGTTGGGAGTCCCCGTCCCCTATTCAAGAATCCAGCATACCAATAGCGCTAACGCACAGAGATATCATGGCAAGAGCCAAGTATGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCATGTATCAATTCATACTACACTCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTCGCTCTTCAAAGTACCCAGATCTGTATAGCACTTGCCAAACATACGGTTATTAAAATCATGATGGTAATCGGTGGCACACTGCTTAAAGATGATTTGATAAGAGTAAGTCCAACCGTTCATGTTTTAATCGGTAATCATGGTCGTATAGTAGACTTATTAAGCAGGGGATTCATCTAACATATCCAAGTGTAAAATCGT ] [-] EMBL CD161632 [ AAGGACATGCGTATTAAGACGGCTGATGTAACTGCTTTGAAGGGAAGCAGCTTTGAAGACTTTTGTTTGAAGAGAGATATCTTGAAGGGTATATACGAAAAAGGTTGGGAGTCCCCGTCCCCTATTCAAGAATCCAGCATACCAATAGCGCTAACGCACAGAGATATAATGGCAAGAGCCAAGAATGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATAGAACTTGCCAAACATACGGCTATTAAAATCATGCTGGTAATTGGTGGCACACTGCTTAAAGATGATTTGATAAGACTAAGTCAAACCGTTCATGTTTTAATCGGTACTCCTGGTCGTTTAGTAGACTTACTAAGCAGGGGACTCAT TGACATATCCAAGTGTAAAATTGT ] [+] EMBL CD094498 [ GGCTGATGTAACTGCTTTGAAGGGAAGCAGCTTTGAAGACTTTTGTTTGAAGAGAGATATCTTGAAGGGTATATACGAAAAAGGTTGGGAGTCCCCGTCCCCTATTCAAGAATCCAGCATACCAATAGCGCTAACGCACAGAGATATAATGGCAAGAGCCAAGAATGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATAGAACTTGCCAAACATACGGCTATTAAAATCATGCTGGTAATTGGTGGCACACTGCTTAAAGATGATTTGATAAGACTAAGTCAAACCGTTCATGTTTTAATCGGTACTCCTGGTCGTTTAGTAGACTTACTAAGCAGGGGACTCAT TGACATATCCAAGTGTAAAATTGTTGTTCTTGATGAAGCAGACAAACTACTGTCTGAAGAGCTCATAAGTGGAGTCGAAGAGATTCTCAATGGTGTGGATAAAAGTCGCCAAGTTCTCGTTTACTCAGCAACGTACCCAGTTACAGTTCAGTCATTTATGAA ] [-] EMBL CD164445 [ CTTTGAAGGGAAGCAGCTCTGAAGACTTTTGTTTGAAGAGAGATATCTTGAAGGGTATATACGAAAAAGGTTGGGAGTCCCCGTCCCCTATTCAAGAATCCAGCATACCAATAGCGCTAACGCACAGAGATATAATGGCAAGAGCCAAGAATGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATAGAACTTGCCAAACATACGGCTATTAAAATCATGC ] [+] EMBL CD072642 [ GAAAAAGGTTGGGAGTCCCCGTCCCCTATTCAAGAATCCAGCATACCAATAGCGCTAACGCACAGAGATATAATGGCAAGAGCCAAGAATGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATAGAACTTGCCAGACATACGGCTATTAA ] [+] EMBL CD072592 [ CCCCTATTCAAGAATCCAGCATACCAATAGCGCTAACGCACAGAGATATAATGGCAAGAGCCAAGAATGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATAGAACTTGCCAAACATACGGCTATTAAAATCATGCTGGTAATTGGTGGCACACTGCTTANAGATGATTTGATAAGACTAAGTCAAACCGTTCATGTTTTAATCGGTACTCCTGGTCGTTTAGTAGACTTACTAAGCAGGGGACT ] [+] EMBL CD072629 [ CCCCTATTCAAGAATCCAGCATACCAATAGCGCTAACGCACAGAGATATAATGGCAAGAGCCAAGAATGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATAGAACTTGCCAAACATACGGCTATTAAAATCATGCTGGTAATTGGTGGCACACTGCTTAAAGATGATTTGATAAGACTAAGTCAAACCGTTCATGTTTTAATCGGTACTCCTGGTCGTTTAGTAGACTTACTAAGCAGGGGACTCAT TGACATATCCNAGTGT ] [+] EMBL CD182216 [ ggtgGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATAGAACTTGCCAAACATACGGCTATTAAAATCATG ] [+] EMBL CD182264 [ ggtgGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATGGAACTTGCCAAACATACGGCTATTAAAATCATG ] [+] EMBL CD182327 [ TGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTATCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATAGAACTTGCCAAACATACGGCTATTAAAATCATG ] [-] EMBL CD182253 [ GGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATAGAACTTGCCAAACATACGGCTATTAAAATCATGC ] [+] EMBL CD188778 [ AAATCATGCTGGTAATTGGTGGCACACTGCTTAAAGATGATTTGATAAGACTAAGTCAAACCGTTCATGTTTTAATCGGTACTCCTGGTCGTTTAGTAGACTTACTAAGCAGGGGACTCAT TGACATATCCAAGTGTAAAATTGTTGTTCTTGATGAAGCAGACAAACTACTGTCTGAAGAGCTCATAAGTGGAGTCGAAGAGATTCTCAATGGTGTGGATAAAAGTCGCCAAGTTCTCGTTTACTCAGCAACGTACCCAGTTACAGTTCAGTCATTTATGAATCAGCATTTGC GCAATCCCTACCAAATAAATTTAATGGAGACATTAACGTTGAAAGGAATTACTGAATATTATGCATATGTACAGGAAAAACATAAGGTACACTGCTTGAATACATTGTTTTCCAAACTACAGATCAGCCAGTCCATAATTTTCTGTAGTTCAGCACAACGAGTCGAACTTCTTGCCAAAGAAATCACCCAGTTGGGATATTCCTGTTATTATATACATG ] [+] EMBL CD084120 [ acgaggGAGATTCTCAATGGTGTGGATAAACGTCGCCAAGTTCTCGTTTACTCAGCAACGTACCCAGTTACAGTTCAGTCATTTATGAATCAGCATTTGCTGCAATCCCTACCATATAAATTTAATGGAGACATTAACGTTGAAAGGAATTACTGAATATTATGCATATGTACAGGAAAAACATAAGGTACACTGCTTGAATACATTGTTTTCCAAACTACAGATCAGCCAGTCCATAATTTTCTGTAGTTCAGCACAACGAGTCGAACTTCTTGCCCAAAAAATCACCCAGTTGGGATATTCCTGTCATTATATACATGCACGGATGTCTCAGCAGGACCGCAACAGAGTCTTTCATGATTTTCGGAATGGTTGCTGCCGCAACCTTG ] [+] EMBL AI977431 [ AAGTTCTCGTTTACTCAGCAACGTACCCAGTTACAGTTCAGTCATTTATGAATCAGCATTTGC GCAATCCCTACCAAATAAATTTAATGGAGACATTAACGTTGAAAGGAATTACTGAATATTATGCATATGTACAGGAAAAACATAAGGTACACTGCTTGAATACATTGTTTTCCAAACTACAGATCAGCCAGTCCATAATTTTCTGTAGTTCAGCACAACGAGTCGAACTTCTTGCCAAAAAAATCACCCAGTTGGGATATTCCTGTTATTATATACATGCACGGATGTCTCAGCAGGACCGCAACAGAGTCTTTCATGATTTTCGGAATGGTTGCTGCCGCAACCTTGTTTGTACAGACCTTNTGACTCGTGGAATTGACATTCCGACTGTGAATGTTGTTATAAATTTTGACTTCCCAAAATATTCTGAAACCTATTTGCATCGTATTGGTAGATCTGGTCGCTTTGGTCATTTGGGCATTGCCATAAACTTGGgt ] [-] EMBL CD155163 [ TTTGC GCGATCCCTACCAAATAAATTTAATGGAGACATTAACGTTGAAAGGAATTACTGAATATTATGCATATGTACAGGAAAAACATAAGGTACACTGCTTGAATACATTGTTTTCCAAACTACAGATCAGCCAGTCCATAATTTTCTGTAGTTCAGCACAACGAGTCGAACTTCTTGCCAAAAAAATCACCCAGTTGGGATATTCCTGTTATTATATACATGCACGGATGTCTCAGCAGGACCGCAACAGAGTCTTTCATGATTTTCGGAATGGTTGCTGCCGCAACCTTGTTTGTACAGACCTTTTGACTCGTGGAATTGACATTCCGACTGTGAATGTTGTTATAAATTTTGACTTCCCAAAATATTCTGAAACCTATTTGCATCGTATTGGTAGATCTGGTCGTTTTGGTCATTTGGGCATTGCCATAAACTTGGTTACGTATGCCGATAGATATTC ] [-] EMBL CD111001 [ CGTTGAAAGGAATTACTGAATATTATGCATATGTACAGGAAAAACATAAGGTACACTGCTTGAATACATTGTTTTCCAAACTACAGATCAGCCAGTCCATAATTTTCTGTAGTTCAGCACAACGAGTCGAACTTCTTGCCAAAAAAATCACCCAGTTGGGATATTCCTGTTATTATATACATGCACGGATGTCTCAGCAGGACCGCAACAGAGTCTTTCATGATTTTCGGAATGGTTGCTGCCGCAACCTTGTTTGCACAGACCTTTTGACTCGTGGAATTGACATTCCGACTGTGAATGTTGTTATAAATTTTGACTTCCCAAAAT ] [+] EMBL CD066649 [ CAGAGTCTTTCATGATTTTCGGAATGGTTGCTGCCGCAACCTTGTTTGTACAGACCTTTTGACTCGTGGAATTGACATTCCGACTGTGAATGTTGTTATAAATTTTGACTTCCCAAAATATTCTGAAACCTATTTGCATCGTATTGGTAGATCTGGTCGTTTTGGTCATTTGGGCATTGCCATAAACTTGGTTACGTATGCCGATAGATATTCATTAAAAACAGTGGAAACAGAACTGGTTACTGAAATCAAACCAATTCCTAAAGAAATCGACAAGCGGTTATATGTTGCGGAGCACCAAAAATGAAAATAATTTGGATCCAATGACAAGAGAGGCGCTGTTTAATGGTCGTGGGTTGCCTTCANGCAACAAGGATGAGGTTGTAAACAATCATTAATATATATGACTT ] [-] EMBL CD183862 [ AACTGGTTACTGAAATCAAACCAATTCCTAAAGAAATCGACAAGCGGTTATATGNTGCGGAGTACC AAAATGAAAATAATTTGGATCCAATGACAAGAGAGGCGCTGTTTAATGGTCGTGGGTTGCCTTCAGGCAACAAGGATGAGGTTGTAAACAATCATTAATATATATGACTTCCCGGTGACTTCTGGGCATTTACCTAAGATGCTCGCCACTTT AGAAT CCCTAATTTTTTGA GTTTAGGTTATCCCTATTATTTTCTTCGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGTATAGTTTAATTTTTCCCATCTGTCCTTTTCAG TTGGGATTTGTTTTTTCAAATGTTTATTTTTTTGTTATTATAATTAACCCTAACCAGAACTCCCCGTTCCCCTGTATTATATCCCAAATGTACAGTTAGCTTATATGTTCATGATATTAATGAATGTTTGCCATCCGTGTCGCTTTGAAAGTCCCCTGTGGCTTTGTAGCA ] [+] EMBL SMAA18497 [ TGCGGAGTACC AAAATGAAAATAATTTGGNTCCAATGACAAGAGAGGCGCTGTTTAATGGTCGTGGGTTGCCTTCAGGCAACAAGGATGAGGTTGTAAACAATCATTAATATATATGACTTCCCGGTGACTTCTGGGCATTTACCTAAGATGCTCGCCACTTTAAGAATCCCCNAATTTTTTGANGTT ] [-] EMBL CD157631 [ CTGTTTAATGGTCGT GGTGCCCTTCAGGCAACAAGGATGAGGTTGTAAACAATCATTAATATATATGACTTCNCGGTGACTTCTGGGCATTTACCTAAGATGCTCGCCACTTT AGAAT CCCTAATTTTTTGA GTTTAGGTTATCCCTATTATTTTCTTCGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGTATAGTTTAATTTTTCCCATCTGTCCTTTTCAG TTGGGATTTGTTT ] [-] EMBL CD144538 [ TGTTTAATGGTCGTGGGTTGCCTTCAGGCAACAAGGATGAGGTTGTAAACAATCATTAATATATATGACTTCCCGGTGACTTCTGGGCATTTACCTAAGATGCTCGCCACCTT AGAAT CCCTAATTTTTTGA GTTTAGGTTATCCCTATTATTTTCTTCGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGTATAGTTTAATTTTTCCCATCTGTCCTTTTCAG TTGGGATTTGTTTTTTCAAATGTTTATTTTTTTGTTATTATAATTAACCCT ] [-] EMBL CD196884 [ GTTATATGGTCGTGGGTTGCCTTCAGGCAACAAGGATGAGGTTGTAAACAATCATTAATATATATGACTTCCCGGTGACTTCTGGGCATTTACCTAAGATGCTCGCCACTTT AGAAT CCCTAATTTTTTGA GTTTAGGTTATCCCTATTATTTTCTTCGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGTATAGTTTAATTTTTCCCATCTGTCCTTTTCAG TTGGGATTTGTTTTTTCAAATGTTTATTTTTTTGTTATTATAATTAACCCTAACCAGAACTCCCCGTTCGCCTGTATTATATCCCAAATGTACAGTTAGCTTATATGTTCATGATATTAATGAATGTTTGCCATCCGTGTCGCTTTGAAAGTCCCCTGTGGCTTTGTAGCATCCAAATGATGGCTTTGAGGAGTGTTTTGGATCTACTCGCCACCCACCCCATATTCTGTATGTGGTCAGTGTTGCCCTC ] [-] EMBL CD141659 [ TGGTCGTGGGTTGCCTTCAGGCAACAAGGATGAGGTTGTAAACAATCATTAATATATATGACTTCCCGGTGACTTCTGGGCATTTACCTAAGATGCTCGCCACTTT AGAAT CCCTAATTTTTTGA GTTTAGGTTATCCCTATTATTTTCTTCGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGTATAGTTTAATTTTTCCCATCTGTCCTTTTCAG TTGGGATTTGTTTTTTCAAATGTTTATTTTTTTGTTATTATAATTAACCCTAACCAGAACT ] [-] EMBL CD140466 [ AATCATGAATATATATGACTTCCCGGTGACTTCTGGGCATTTACCTAAGACGCTCGCCACTTT AGAAT CCCTAATTTTTTGA GTTTAGGTTATCCCTATTATTTTCTTCGCAGCTTCAATGAATCCATTCCCACTCGTGCTATGCTGTATAGTTTAATTTTTCCCATCTGTCCTTTTCAG TTGGGATTTGTTCTTTCAAATGTTTATTTTTTTGTTATTATAATTAACCCTAACCAGAACTCCCCGTTCGCCTGTATTATATCCCAAATGTACAGTTAGCTTATATGTTCATGATATTAATGAATGTTTGCCATCCGTGTCGCTTTGAAAGTCCCCTGTGGCTTTGTAGCATCCAAATGATGGCTTTGAGGAGTGTTTTGGATCTACTCGCCACCCACCCCATATTCTGTATGTGGTCAGTGTTGCCCTC ] [-] EMBL CD140510 [ TATATATGACTTCCCGGTGACTTCTGGGCATTTACCTAAGATGCTCGCCACTTT AGAAT CCCTAATTTTTTGA GTTTAGGTTATCCCTATTATTTTCTTCGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGCATAGTTTAATTTTTCCCATCTGTCCTTTTCAG TTGGGATTTGTTTTTTCAAATGTTTATTTTTTTGTTATTATAATTAACCCTAACCAGAACTCCCCGTTGCCCTGTATTATATCCCAAATGTACAGTTAGCTTATATGTTCATGATATTAATGAATGTTTGCCATCCGTGTCGCTTTGAAAGTCCCCTGTGGCTTTGTAGCATCCAAATGATGGCTTTGAGGAGTGTTTTGGATCTACTCGCCACCCACCCCATATTCTGTATGTGGTCAGTGTTGCCCTC ] [-] EMBL CD140442 [ GGGCATTTACCTAAGATGCTCGCCACTTT AGAAT CCCTAATTTTTTGA GTTTAGGTNATCCCTATTATTTTCTTCGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGTATAGTTTAATTTTTCCCATCTGTCCTTTTCAG TTGGGATTTGTTTTTTCAAATGTTTATTTTTTTGTTATTATAATTAACCCTAACCAGAACTCCCCGTTCCCCTGTATTATATCCCAAATGTACAGTTAGCTTATATGTTCATGATATTAATGAATGTTTGCNATCCGTGTCGCTTTGAAAGTCCCCTGTGGCTTTGTAGCATCCAAATGATGGCTTTGAGGAGTGTTTTGGATCTACTCGCCACCCACCCCATATTCTGTATGTGGTCAGTGTTGCCCTC ] [+] EMBL CD202741 [ ATGCTCGCCACTTT AGAAT CCCTAATTTTTTGA GTTAAGGTTATCCCTATTATTTTCTTCGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGTATAGTTTAATTTTTCCCATCTGTCCTTTTCAG TTGGGATTTGTTTTTTCAAATGTTTATTTTTTTGTTATTATAATTAACCCTAACCAGAACTCCCCGTTCCCCTGTATTATATCCCAAATGTACAGTTAGCTTATATGTTCATGATATTAATGAATGTTTGCCATCCGTGTCGCTTTGAAAGTCCCCTGTGGCTTTGTAGCATCCAAATGATGGCTnt ] [-] EMBL CD157777 [ T AGAAT CCCTAATTTTTTGA GTTTAGGTTATCCCTATTATTTTCTTTGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGTATAGTTTAATTTTTGCCATCTGTCCTTTTCAG TTGGGATTTGTTTTTTCAAACGTTTATTTTTTTGTTATTATAATTAACCCTAACC ] [-] EMBL CD157623 [ TCTTCGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGTATAGTTCAATTTTTCCCATCTGTCCTTTTCAG TTGGGATNTGTTTTTTCAAATGTTTA TTTTATGTTATTATAATTAACCCTAACC ] [-] EMBL CD138469 [ TCGTGATATGCTGTATAGTTTAATTTTTCNCATCTGTCC TTTCAGTTTGGGATTTGTTNTTTCAAATGTTTATTTTTTTGTTATTATAATTAACCCTAACCAGAACTCCCCGTTCCCCTGTATTATATCCCAAATGTACAGTTAGCTTATATGTTCATGATATTAATGAATGTTTGCCATCCGTGTCGCTTTGAAAGTCCCCTGTGGCTTTGTAGCATCCAAATGATGGCTTTGAGGAGTGTTTTGGATCTACTCGCCACCCACCCCATATTCTGTATGTGGTCAGTGTTGCCCTCATTCGCTTGCTCTTGGCT ] [-] EMBL AI067853 [ GTGATATGCTGTGTAGGTTAATTTTTCCCATCTGTCCTTTTCAG TTGGGAGTTGTTTTTTCAAATGTTTAGTTGTGTGTTATTATAATTAACCCTAACCAGAACTCCCCGTTCCCCTGTATTATATCCCAAATGTACAGTTAGCTTATATGTTCATGATATTAATGAATGTTTGCCATCCGTGTCGCTTTGAAAGTCCCCTGTGGCTTTGTAGCATCCAAATGATGGCTTTGAGGAGTGTTTTGGATCTACTCGCCACCCACCCCATATTCTGTATGTGGTCAGTGTTGCCCTCATTCGCTTGCTCTTGGCTGTTGTTATTATCCAGGAAGCTGACCAATGGTGTTTT ] [-] EMBL AI068069 [ TTTCTCAAATGTTTATACTGGTGGTATTATAATTAACCCTAACCAGAACTCCCCGTTCCCCTGTATTATATCCCAAATGTACAGTTAGCTTATATGTTCATGATATTAATGAATGTTTGCCATCCGTGTCGCGTTGAAAGTCCCCTGTGGCTTTGTAGCATCCAAATGATGGCTTTGAGGAGTGTTTTGGATCTAGTCGCCACCCACCCCATATTCTGTATGTGGTCAGTGTTGCCCTCATTAGCTTGCTCTTGGCTGTTGTTATTAGCCAGGAAGCTGACCAATGGTGTATTT] [-] EMBL CD141358 [ anCCCTACCCAGAACTCCCCGTTCCCCTGTATTATATCCCAAATGTACAGTTAGCTTATATGTTCATGATATTAATGAATGTTTGCCATCCGTGTCGCTTCGAAAGTCCCCTGTGGCTTTGTAGCATCCAAATGATGGCTTCGAGGAGTGTTTTGGATCTACTCGCCACCCACCCCATATTCTGTATGTGGT ] consensusID : consensus_11156#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 426 fasta sequence [TCGGCACCCAATGCTACTCTCGGGATCGCAACAGAGTCTTTCATGATTTTCGGAATGGTTGCTGCCGCAACCTTGTTTGTACAGACCTTTTGACTCGTGGAATTGACATTCCGACTGTGAATGTTGTTATAAATTTTGACTTCCCAAAATATTCTGAAACCTATTTGCATCGTATTGGTAGATCTGGTCGTTTTGGTCATTTGGGCATTGCCATAAACTTGGTTACGTATGCCGATAGATATTCATTAAAAACAGTGGAAACAGAACTGGTTACTGAAATCAAACCAATTCCTAAAGAAATCGACAAGCGGTTATATGTTGCGGAGTACCAAAATGAAAATAATTTGGATCCAATGACAAGAGAGGCGCTGTTTAATGGTCGTGGGTTGCCTTCAGGCAACAAGGATGATGTTGTAAACAATCATT] [+] EMBL CD062670 [TCGGCACCCAATGCTACTCTCGGGATCGCAACAGAGTCTTTCATGATTTTCGGAATGGTTGCTGCCGCAACCTTGTTTGTACAGACCTTTTGACTCGTGGAATTGACATTCCGACTGTGAATGTTGTTATAAATTTTGACTTCCCAAAATATTCTGAAACCTATTTGCATCGTATTGGTAGATCTGGTCGTTTTGGTCATTTGGGCATTGCCATAAACTTGGTTACGTATGCCGATAGATATTCATTAAAAACAGTGGAAACAGAACTGGTTACTGAAATCAAACCAATTCCTAAAGAAATCGACAAGCGGTTATATGTTGCGGAGTACCAAAATGAAAATAATTTGGATCCAATGACAAGAGAGGCGCTGTTTAATGGTCGTGGGTTGCCTTCAGGCAACAAGGATGATGTTGTAAACAATCATT] consensusID : consensus_11156#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 298 fasta sequence [TCGCGGCCAAAAATTCGTTCCGAGGGTTGCTCTTGATGAAGCAGACAAACTACTGTCTGAAGAGCTCATAAGTGGAGTCGAAGAGATTCTCAATGGTGTGGATAAAAGTCGCCAAGTTCTCGTTTACTCAGCAACGTACCCAGTTACAGTTCAGTCATTTATGAATCAGCATTTGCGCAATCCCTACCAAATAAATTTAATGGAGACATTAACGTTGAAAGGATTACTGAATATTATGCATATGTACAGGAAAAACATAAGTACACTGCTTGAATACATTGTTTCCAAACTACAGATC] [+] EMBL CD078038 [TCGCGGCCAAAAATTCGTTCCGAGGGTTGCTCTTGATGAAGCAGACAAACTACTGTCTGAAGAGCTCATAAGTGGAGTCGAAGAGATTCTCAATGGTGTGGATAAAAGTCGCCAAGTTCTCGTTTACTCAGCAACGTACCCAGTTACAGTTCAGTCATTTATGAATCAGCATTTGCGCAATCCCTACCAAATAAATTTAATGGAGACATTAACGTTGAAAGGATTACTGAATATTATGCATATGTACAGGAAAAACATAAGTACACTGCTTGAATACATTGTTTCCAAACTACAGATC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11156#0 GAAGGACATGCGTATTAAGACGGCTGATGTAACTGCTTTGAAGGGAAGCAGCTTTGAAGA 60 consensus_11156#1 ------------------------------------------------------------ consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 CTTTTGTTTGAAGAGAGATATCTTGAAGGGTATATACGAAAAAGGTTGGGAGTCCCCGTC 120 consensus_11156#1 ------------------------------------------------------------ consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 CCCTATTCAAGAATCCAGCATACCAATAGCGCTAACGCACAGAGATATAATGGCAAGAGC 180 consensus_11156#1 ------------------------------------------------------------ consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 CAAGAATGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATAC 240 consensus_11156#1 ------------------------------------------------------------ consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 TACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAAC 300 consensus_11156#1 ------------------------------------------------------------ consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 TAGCCAGATCTGTATAGAACTTGCCAAACATACGGCTATTAAAATCATGCTGGTAATTGG 360 consensus_11156#1 ------------------------------------------------------------ consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 TGGCACACTGCTTAAAGATGATTTGATAAGACTAAGTCAAACCGTTCATGTTTTAATCGG 420 consensus_11156#1 ------------------------------------------------------------ consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 TACTCCTGGTCGTTTAGTAGACTTACTAAGCAGGGGACTCATTGACATATCCAAGTGTAA 480 consensus_11156#1 ------------------------------------------------------------ consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 AATTGTTGTTCTTGATGAAGCAGACAAACTACTGTCTGAAGAGCTCATAAGTGGAGTCGA 540 consensus_11156#1 ------------------------------------------------------------ consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 AGAGATTCTCAATGGTGTGGATAAAAGTCGCCAAGTTCTCGTTTACTCAGCAACGTACCC 600 consensus_11156#1 ------------------------------------------------------------ consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 AGTTACAGTTCAGTCATTTATGAATCAGCATTTGCGCAATCCCTACCAAATAAATTTAAT 660 consensus_11156#1 ------------------------------------------------------------ consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 GGAGACATTAACGTTGAAAGGAATTACTGAATATTATGCATATGTACAGGAAAAACATAA 720 consensus_11156#1 ------------------------------------------------------------ consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 GGTACACTGCTTGAATACATTGTTTTCCAAACTACAGATCAGCCAGTCCATAATTTTCTG 780 consensus_11156#1 ------------------------------------------------------------ consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 TAGTTCAGCACAACGAGTCGAACTTCTTGCCAAAAAAATCACCCAGTTGGGATATTCCTG 840 consensus_11156#1 ------------------------------------------------------------ consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 TTATTATATACATGCACGGATGTCTCAGCAGGACCGCAAC--AGAGTCTTTCATGATTTT 898 consensus_11156#1 ------TCGGCACCCAATGCTACTCT--CGGGATCGCAAC--AGAGTCTTTCATGATTTT 50 consensus_11156#2 ---------------------------------TCGCGGCCAAAAATTCGTTCCGAGGGT 27 *** * * * * * ** * consensus_11156#0 CGGAATGGTTGCTGCCG-CAACCTTGTTTGTACAGACCTTTTGACTCGTGGAATTGACAT 957 consensus_11156#1 CGGAATGGTTGCTGCCG-CAACCTTGTTTGTACAGACCTTTTGACTCGTGGAATTGACAT 109 consensus_11156#2 TGCTCTTGATGAAGCAGACAAACTACTGTCTGAAGAGCTCATAA---GTGGAGTCGAAGA 84 * * * ** ** * *** ** * * * *** ** * * ***** * ** consensus_11156#0 TCCGACTGTGAATGTTGTTATAAATTTTGACTTCCCAAAATATTCTGAAACCTATTTGCA 1017 consensus_11156#1 TCCGACTGTGAATGTTGTTATAAATTTTGACTTCCCAAAATATTCTGAAACCTATTTGCA 169 consensus_11156#2 ---GATTCTCAATGGTGTGGATAA-----AAGTCGCCAAGTTCTCGTTTACTCA---GCA 133 ** * * **** *** ** * ** * ** * ** ** * *** consensus_11156#0 TCGTATTGGTAGATCTGGTCGTTTTGGTCATTTGGGCATTGCCATAAACTTGGTTACGTA 1077 consensus_11156#1 TCGTATTGGTAGATCTGGTCGTTTTGGTCATTTGGGCATTGCCATAAACTTGGTTACGTA 229 consensus_11156#2 ACGTACC--CAGTTACAGT----TCAGTCATTTATGAATCAGCATTTGCGCAATCCC--- 184 **** ** * ** * ******* * ** *** * * * consensus_11156#0 TGCCGATAGATATTCATTAAAAACAGTGGAAACAGAACTGGTTACTGAA-ATCAAACCAA 1136 consensus_11156#1 TGCCGATAGATATTCATTAAAAACAGTGGAAACAGAACTGGTTACTGAA-ATCAAACCAA 288 consensus_11156#2 TACCAA-ATAAATTTAATGGAGACATTA-ACGTTGAAAGGATTACTGAATATTATGCATA 242 * ** * * * *** * * * *** * * *** * ******** ** * * * consensus_11156#0 TTCCTAAAGAAATCGACAAGCGGTTATATGT-TGCGGAGTA-CCAAAATGAAAATAATTT 1194 consensus_11156#1 TTCCTAAAGAAATCGACAAGCGGTTATATGT-TGCGGAGTA-CCAAAATGAAAATAATTT 346 consensus_11156#2 TGTACAGGAAAAACATAAGTACACTGCTTGAATACATTGTTTCCAAACTACAGATC---- 298 * * *** * * * ** * * ** ***** * * ** consensus_11156#0 GGATCCAATGACAAGAGAGGCGCTGTTTAATGGTCGTGGGTTGCCTTCAGGCAACAAGGA 1254 consensus_11156#1 GGATCCAATGACAAGAGAGGCGCTGTTTAATGGTCGTGGGTTGCCTTCAGGCAACAAGGA 406 consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 TGAGGTTGTAAACAATCATTAATATATATGACTTCCCGGTGACTTCTGGGCATTTACCTA 1314 consensus_11156#1 TGATGTTGTAAACAATCATT---------------------------------------- 426 consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 AGATGCTCGCCACTTTAGAATCCCTAATTTTTTGAGTTTAGGTTATCCCTATTATTTTCT 1374 consensus_11156#1 ------------------------------------------------------------ consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 TCGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGTATAGTTTAATTTTTCCCAT 1434 consensus_11156#1 ------------------------------------------------------------ consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 CTGTCCTTTTCAGTTGGGATTTGTTTTTTCAAATGTTTATTTTTTTGTTATTATAATTAA 1494 consensus_11156#1 ------------------------------------------------------------ consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 CCCTAACCAGAACTCCCCGTTCCCCTGTATTATATCCCAAATGTACAGTTAGCTTATATG 1554 consensus_11156#1 ------------------------------------------------------------ consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 TTCATGATATTAATGAATGTTTGCCATCCGTGTCGCTTTGAAAGTCCCCTGTGGCTTTGT 1614 consensus_11156#1 ------------------------------------------------------------ consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 AGCATCCAAATGATGGCTTTGAGGAGTGTTTTGGATCTACTCGCCACCCACCCCATATTC 1674 consensus_11156#1 ------------------------------------------------------------ consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 TGTATGTGGTCAGTGTTGCCCTCATTCGCTTGCTCTTGGCTGTTGTTATTATCCAGGAAG 1734 consensus_11156#1 ------------------------------------------------------------ consensus_11156#2 ------------------------------------------------------------ consensus_11156#0 CTGACCAATGGTGTTTTT 1752 consensus_11156#1 ------------------ consensus_11156#2 ------------------ |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||